Spg032506 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032506
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold2: 32204451 .. 32205503 (-)
RNA-Seq Expression	Spg032506
Synteny	Spg032506

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACAAAGAGGTACCTGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGACGCCAGAGGAGAAAGAAGCGAAAAGGAGGAGAAAGCAATAGAGGGTCGAGGATCAGGAGGCTCTACAGAAAGCGACGGATGATGTGGCTGCCACAGTAGTTGAAGAAAACCCGAAAGAACCAGAAGAACAGAACCTAGAACAGACTGAACAGAGGGTCGCGGATACAGAAGAAGTTCAAGAAGAGCAAACAGAGGAAGTTCGAGAGGAAAATACCGAGGAAGTTCAAGAAGAGATTACAGAGAAAGTTCAAGAAAAGCAGGCCGAGGATGTGCAAGAGCAACAGGCAGATGATGTTCAGGTAACGGATAATGAGCCAGTGCAGGAGGCTTAAGTGGAGGTGATCATGCCAGAAGTACCAAAACGTCGCCGCGTTAAGAGGAAAGCAGGCCGCGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGGAAGAGAGGAACGAGAAGAGAAGGAAGCTGAGGACAAGGCTAGAGAAGAAGAAGCAAAGAAAGCGGAAGAAGAAATTTTGCCCAAACAAGCGGAAGACAAGGGCAAATGTATTGCTGAGGCATCGGGTGAGGCTGACGTGATTGAGGAATCGAGATTTCCGTACAATCGCTTCATCAATAACCTTGCTCGAGCAAAGTATGTTGAGATGCTGAGAAGGGACTTCCTGTTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGTGAACCTCGGTTGGAGTCAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTCCGCAAATATTGATGATCAGGAGGAATTTCAGGTTATCGTTCGAGGAGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATGCTTTGTTCAACCTCCAGGACTTTCCACATGCAGGCTTTAATGAGATGGTGGTCGCACCATCTAGCGACTAG

mRNA sequence

ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACAAAGAGGAGGCTCTACAGAAAGCGACGGATGATGTGGCTGCCACAGTAGTTGAAGAAAACCCGAAAGAACCAGAAGAACAGAACCTAGAACAGACTGAACAGAGGGTCGCGGATACAGAAGAAGTTCAAGAAGAGCAAACAGAGGAAGTTCGAGAGGAAAATACCGAGGAAGTTCAAGAAGAGATTACAGAGAAAGTTCAAGAAAAGCAGGCCGAGGATGTGCAAGAGCAACAGGCAGATGATGTTCAGAGGAAAGCAGGCCGCGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGGAAGAGAGGAACGAGAAGAGAAGGAAGCTGAGGACAAGGCTAGAGAAGAAGAAGCAAAGAAAGCGGAAGAAGAAATTTTGCCCAAACAAGCGGAAGACAAGGGCAAATGTATTGCTGAGGCATCGGGTGAGGCTGACGTGATTGAGGAATCGAGATTTCCGTACAATCGCTTCATCAATAACCTTGCTCGAGCAAAGTATGTTGAGATGCTGAGAAGGGACTTCCTGTTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGTGAACCTCGGTTGGAGTCAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTCCGCAAATATTGATGATCAGGAGGAATTTCAGGTTATCGTTCGAGGAGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATGCTTTGTTCAACCTCCAGGACTTTCCACATGCAGGCTTTAATGAGATGGTGGTCGCACCATCTAGCGACTAG

Coding sequence (CDS)

ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACAAAGAGGAGGCTCTACAGAAAGCGACGGATGATGTGGCTGCCACAGTAGTTGAAGAAAACCCGAAAGAACCAGAAGAACAGAACCTAGAACAGACTGAACAGAGGGTCGCGGATACAGAAGAAGTTCAAGAAGAGCAAACAGAGGAAGTTCGAGAGGAAAATACCGAGGAAGTTCAAGAAGAGATTACAGAGAAAGTTCAAGAAAAGCAGGCCGAGGATGTGCAAGAGCAACAGGCAGATGATGTTCAGAGGAAAGCAGGCCGCGCTAGGGTTGTCCGAACTAATACTCCTTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGGAAGAGAGGAACGAGAAGAGAAGGAAGCTGAGGACAAGGCTAGAGAAGAAGAAGCAAAGAAAGCGGAAGAAGAAATTTTGCCCAAACAAGCGGAAGACAAGGGCAAATGTATTGCTGAGGCATCGGGTGAGGCTGACGTGATTGAGGAATCGAGATTTCCGTACAATCGCTTCATCAATAACCTTGCTCGAGCAAAGTATGTTGAGATGCTGAGAAGGGACTTCCTGTTTGAACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGTGAACCTCGGTTGGAGTCAATTTTGTGCGAAGCCGGAACCTGTTAATTCCAACATTGTTCGGGAATTTTCCGCAAATATTGATGATCAGGAGGAATTTCAGGTTATCGTTCGAGGAGTGCCCGTTGACTGGAGCCCAGGAGCCATTAATGCTTTGTTCAACCTCCAGGACTTTCCACATGCAGGCTTTAATGAGATGGTGGTCGCACCATCTAGCGACTAG

Protein sequence

MAKTRARKERENEDKEEALQKATDDVAATVVEENPKEPEEQNLEQTEQRVADTEEVQEEQTEEVREENTEEVQEEITEKVQEKQAEDVQEQQADDVQRKAGRARVVRTNTPSPPTTDSERENAGREEREEKEAEDKAREEEAKKAEEEILPKQAEDKGKCIAEASGEADVIEESRFPYNRFINNLARAKYVEMLRRDFLFERGFGDDLPRFLRTGIVNLGWSQFCAKPEPVNSNIVREFSANIDDQEEFQVIVRGVPVDWSPGAINALFNLQDFPHAGFNEMVVAPSSD

Homology

The following BLAST results are available for this feature:

BLAST of Spg032506 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032506 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032506 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032506 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 36..86
None	No IPR available	COILS	Coil	Coil	coord: 120..150
None	No IPR available	COILS	Coil	Coil	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032506.1	Spg032506.1	mRNA