Spg032449 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg032449
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Locationscaffold2: 32391782 .. 32397998 (+)
RNA-Seq ExpressionSpg032449
SyntenySpg032449
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTCCAATCCCTTCAATTGGTATCAGAGCCGATTGTAGATCTAATCTTGTTTTTCTAAAATTTGCATTGGTTTGGTGGGATTAATTGCATGGTGGATGTAATTTTGCGAATGAATGTTTTCGATAGATTTGGCCTTAGAATTTACTACTTTGATATGATCAAAATTGTAAGGGCCCTTGTGTTTTTGGGCAATTATATGTAAATTTGATTCAATTGTAAGTCTGGGTCTAGATTAGGCTAAAAAATCGAAGAAGATCGAGACCAAATTTAGCCAAAAACGGAAGAACAGCCACGAAGTTCACCAGATTTCTCCTCCAGACGCAACAGCGTCGAGACGCTGTCTCAAAATCCAAGCAATAAGCGAAAGGCGATGGCGTGTCGACGCTGTGTCGAGTTCCAGCGGCAGTGCTAGGGTTTTCAAGTGGTGAAAACAGTTTGGTTTGGTCTGGTTCAAGGGGTTGGCTACGGTTCGTGCTGGGATGGCTTGGTTCGAGTTTTTTGGAGGCTGGTTCGAGATGGTTCGGGTCGGTTCGGGTCGTTTTGGTCCATTTCATGAGTAATTTAATATAATGGTTATGTTTAATATATGAAATACAATAAGCATGTGGCATGACATTACATAGCTTAAATATAAAGAGTTATATTTAATTTAATGTCTTATGGATGCTTGGGTGATTTTCATGATTTGCATGATATAAGGAGTTATATTAATAAAATATGAAAATCAATTTGTTAATTAACTAAACCACAGTTTAAACCATGACACATCCATAGTTTAATATAAATTTTATATTAAGTCGTGAAATGCAAATGTTATGATTTATTGATTAATTTTAATTTGATTGTTAATTAATTAAACCATATAAAGTTTATTATAGGGATAATCATTAAAATTTATAAGAGTTATACAAGTAATGATTATAAACCGTCAACCTATAATAATGATTGCATGCAAACATAGGATCATAGGTAAAGGAATTAATTTTAAAATGCTTAAAATTAATTAGAGCTAAGATCATGTTAATTCTAATAGGATTAGAATTGTAAACCTGAGACTTCCCTTGGATTATTTGCTCTTGTTACCTATTGTGGAAATTGGATTAAAGTTGTTGTTGTTTCATTGTTGAAGAAAAATGACAAAGCTTTTGGTTGAGGTTGTCTTTGATAATTTTGGATTTTATTTAAAGAAAAAAGAAATGGAAGGAAAAGAGAAGAAAATAGGAAAAGGAAAAAGAAAAAAAAAAAGAGAAAATTAAAGGAAAAGGACAAACGGTGCTTAGTGGTTCTAAGGTCATTCCACCACCGCCTAAGGGCTTTTAAGTCCATTTTCTTCATCATTTCCCATCAAACTTGCAGAACCTTTCGAGAGAGAGAGTGAAGGAAGAAGAAGAGGTAGCTTGCTGGAGTTTTGAGGTTGAAGAAGAGAGGGGAAAGCTCATGCAAGTGCAACAATGGCAGAATCTTGGTTCAATCTGGCCATCTCTTGTTTTTAATTCGGTTTGAGCTACACAAGAAGAATTAAGAGGTGAGGCCTGACTTTCTTGAAAGTTAATTCATTTTCTAGCAAATTGCATGAAGAAAGCTTGAGCTATTTCTAATGTTAAGTTAATGCATTTTGAAGAGGAAAACAGAGCACAAATTTTTCGTGCAAATCTGAAGGGTCTCTTGTTTTCTCTAGTTTTGCGAACGTTCCGGAGTGCACAGGTTGAATTAAAAGCTCCATTTGGTATGATTGGAAAGCTTATTCAGTTTCCTATAACGTGCATGAAGAAGTCATAAGCCAAAAATGACTAGAAGTAGGTTTAATTTCAGGAGAAAATTAGAGGGTAGCAGAAAACACGAATTTGGAATAGCTGTGTTCGGGGAGATTTCTGGACAAATCCGTTGGGAATCTCATTTTCATTCCTTCAAGTAAGTTGTAGAGGGTTCCAAAATGAAGAGTTTGATATTTAGTACATAAATTTGGTCAAGTATTGAGAAAGTTATGAGTGTTTGAAGTTAGGGTATTGAATCTGGAAAATCTGGAAAAAGTGAGGAATGTGATTTTAATTCTAGAGTTTAGAATTCATGAGCATAGAAAGACAAGACTATTTAAGGTTCTGATGCACGGTTTTGGTTGTTTGACATGCCAAGATGAAATAGGCCAAGTCTACAGACTAGGGAACTAGCCAAGGCTGTGAGTGACAAAACAAACTTCGAAAATGATTTCTAAACTATTGTTTATGATTAAATGTTTTACATGTTTGAATATGAACTTATGAATGATACATGATTTCTATGAATGGTTTCAAGCATAAGTTTTGAGCTTAGATTTTCTAATGAGATTTATAAATGAGCACGTGATTATTGACTTTCTGAAAAGTAGTTGAAACGATATCATTTTAAGCAAAGTATGTATTAGCGAGTATTGTTTAAAGATTTTCAGTTTTTCACGAGCAAGCTGAGTAAGCTTGAGTTTTACGAAAGATAAAGATAAACAGGCATGTTTTAATGTTTTCATGTGATTTCTGAGACTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTGTATGGTACTGTGTGCACACAGATTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTATGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCTTTGAGCTAGTAAACGTTGGTTGCACTGGGCGTTCCCTACAAAACGTAGATCTGTCATGTTAGTTAAAATTTTTGATATACTTGATATGTCTTGCTAGATTTTAATGACGTACTTGGATAGTATTTTAGAAAGCTTTTATCATTACACGTTTATGTTTAACGCTTTGATTAAATAGATTTATAGGTTTAAGGTTTACCATGTGTTCTGATTTACGGATTAACAGTTTTAAATTTAGTCACTCACTGGGCTTTATAGCTCACTCTTTCAAAATGTTTTCCCACTTTTCAGGTAGAGATCGAGCTCCAGGTGCCTGATAAACTGCCAAAGTCTGCTAAAAGCTTCCGGATCAAGCTCCAGTACGTGGGTAGAGTTGTACATTGTGTCTGTTTGTATTGTAAATGTCTTTGTAAGAATTGGATAGTTTACGGTTTGTGTAAGCTCTAGAAGTTCTGGTTGTGTAAACCTTAGTTGGATATGTTTTTGGTTGTGATGTCTCTATCAGGTTATTTACTAAACTTAGTTATGTCAGGGCTGCACTTCATGTATGTCTAAAGGTTTTCAAGGTTCCATTGTGTTGTGTTGCATGTAAAGTATTTCATATCTAAGATTAGCATGTTTATCAGGTTCAACGATTCAGCAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCCCGAACTAAGCTAGCAGGTAGTTCGGGAGGGGGTGTGACAAGAATTAAATCTTGCTTAGTTTTAAAATAGTCTTAAAGTGACTAAGTAGGAAAATCATAACTATTGGTTATAAGGGAACTCTACCGGTGAAGTTCTGTCTAAGGCTGGAGGTACTTAAGATGACGGTTTACGGAACACCTCCTACCTGTGAACTGACCCGGAACTTGAGTTGAATTAACCACAGTTACGTTAGCATGCAATGTCGCGAGGTCAATTAAAAGAGTTTAATTCACCTAGATATTTAGAGTAAAGACTTTACATTGTTATGGTTAAAAGGGAACTCTCCCGGTGAAGTTCTGTCTAAGGCTGGAGGTACTTAAGATGACGGTTTACGGAACACCTCCTACCTGTGAACTGACCCGGAACTTGAGTTGAATTAACCACAGTTACGTTAGCATGCAATGTCGCGAGGTCAATTAAAAGAGTTTAATTCACCTAGATATTTAGAGTAAAGACTTTACATTGTTATGGTTAAAAGGGAACTCTCCCACTGAAGTTCTATCTAAGGCTGGAGGTACTTAAGATGACGGTTTACGGAACACCTGCTACCTGGGAACAAATGTGGAACCTGAGTTGAAATAACCATAGTCATGTTAGCATGTGATGTTGCTAGTCTATTAAAAGAGTTTAATTCACATAGAACATTACAGTAAAATTCTTATCATAAAAGTTATAATGGGATTAAATTTAGATAGATTGACTTAGCCGAATTTATCTAAATTAAATAACCCTTAAAACATATGGTAGGACATTTTAGTGGGAGAAAAATTACAAAATGAGATCAAGTTTTGCTCCTACATCCCTATATTTAGAATGTGAGATTCATGCTCGGCTTCGTGTCGCCCTTGGCACGACCTCCCTTCGGAAATTGTTTGCATAGGTCAATATCAGGATGAATGGGGAAAGTGTTTATAGTAAGTGGGAGCGGGACACGTGTCAACGTATCCCTCGGTCTCCAACCATAGGTCACACCGTAAGATTCTTATGATCCGCCTGCGTGTCGTCCTGGAGCGACCATCCCTTCGAAGGGCCTGATCATAGGATTCTGAACACCGTGAACTCCTGAAAAGGATAGGGTCTCTTAGGTTAATCATCAATAGTTGTCTCACCCTTCGGTAGCCTGTTGGTGCACACCTCTGGGATCTAAAAGTGGGAGGGTTATACTTACGAGGATGAGTTAAGTGTATTAACAAATCCTTGACCGAATAACATTGGCTAATGTCTATAGGAATATGAGTTATTTTGGAATTATAATTAGCTGAGAAGTGTCTCATTTCAAAGGAGGAGTAGCTGATCACCCTTCGGTGGTTGTTGCTCTAAACCTCTGAAACATCGTTGCAAAACTAAATCAATAGTCTTAGGGTTCTATGATTGCTTGTTTTGCTAAATTGATTGGATTGTATGCAATTGTTTGCTCGTGTGATGGGTAAGGCAAAGATAACTAATACGGTTGTTAATTTAATTTCAGCAATGTCTTCTTCTATTATCTCACTGCTCAATAACGAAAAATTAACTGAATAAACTTACTCAACGTGGCAATCTAACCTGAATACGATTCTGGTTATAGATGATCTACGATTAGTCTTAACTGAGGAATGTCCTCATTTCCCCAATTTCTAATTCATTAAGAAATGTTCATAATGAATATGACACAGAACACTGCTTAGCTTAAAGGAATATTTTCAGAGACTGTAAATATGATTTACTTGTCTTAGAAACATGCTTAGTGGAGAATGATGATTCTGCCTGGATACTAGATTCAGGGGCCACCAACCATGTTTGTTCTTTCTTTAAAGGAATGAGTTCCTGGCAACAGCTTGAAGCTGGTGAGATGACTCTCAAAGTAGGAACAGGAGAGATCGTCTCAGCTATTGCAATGGGGAACATCAAATTATTTTTCAGTAAGAATAAATACATATTATTGGATAATATGTATGTTGTTCCAAAGATTAAAACCAATTTGATTTCTATATCTTGTATGCTTGAACAAGATTACTCCATATCTTTCTCAGAAAATGAATCATTCATTTCAAGAAAGGGAGTTCATATTTGTTCAGCAAAGCTGGAAAATAATTGATATGTTTTAAGACCAATCGAGAGTAAAGCAATCATGAACACCGAGTTGTTTAAGACTGCTATTACTCAAAGAAAAATGTGACGTATTTCTCCTAGTAGTAACAATAACTATTGTTCGCACGTAACTTCAGAGATTGAGACACGTGGAATAAACAATATATTTGTATTTATATTTGTATGCGTGTGGGTGTACAATCTCTAATGTTAATCCTCTGATTCTCTCTCTTGTGTGTGAATGTGTTTCACTCGAGGGCTGTAGTGCTTGTTCTCGAGTCTGAAGCTTCAATTGATTCTTTGAGCTTTTGAAGTCTTGGAGTCTTGAAGAGCCTTTGGTCTTCAAGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTGAAGAGTATTTGGTCTTCAAGGATTTTTTAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTTTTGAAGAGTCTTTGGTCTTCAAGGATTGTTGAAGTCTTCTAATCTTGAAGGGTCTTCAGTCTTTAAGAAGTCTTGGGGTCTTGATGTTTTGAAGAGTCTTTGGTCTTCAAGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTTAAGAAGTCTTGGGGTCCTGAAGTCTTGAAGAGTCTTTGGTCTTCAAGAATTGTTGAAGTCTTCTAG

mRNA sequence

ATGGAATTCCAATCCCTTCAATTGGGGTTGGCTACGGTTCGTGCTGGGATGGCTTGGTTCGAGTTTTTTGGAGGCTGGTTCGAGATGGTTCGGGTCGGTTCGGGTCAGGAAAACAGAGCACAAATTTTTCGTGCAAATCTGAAGGGTCTCTTGTTTTCTCTAGTTTTGCGAACGTTCCGGAGTGCACAGGTAGAGATCGAGCTCCAGGTGCCTGATAAACTGCCAAAGTCTGCTAAAAGCTTCCGGATCAAGCTCCAGTTATTTACTAAACTTAGTTATGTCAGGGCTGCACTTCATGTATGTCTAAAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCCCGAACTAAGCTAGCAGGGAACTCTACCGGTGAAGTTCTGTCTAAGGCTGGAGGGAACTCTCCCGGTGAAGTTCTGTCTAAGGCTGGAGGGAACTCTCCCACTGAAGTTCTATCTAAGGCTGGAGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTGAAGAGTATTTGA

Coding sequence (CDS)

ATGGAATTCCAATCCCTTCAATTGGGGTTGGCTACGGTTCGTGCTGGGATGGCTTGGTTCGAGTTTTTTGGAGGCTGGTTCGAGATGGTTCGGGTCGGTTCGGGTCAGGAAAACAGAGCACAAATTTTTCGTGCAAATCTGAAGGGTCTCTTGTTTTCTCTAGTTTTGCGAACGTTCCGGAGTGCACAGGTAGAGATCGAGCTCCAGGTGCCTGATAAACTGCCAAAGTCTGCTAAAAGCTTCCGGATCAAGCTCCAGTTATTTACTAAACTTAGTTATGTCAGGGCTGCACTTCATGTATGTCTAAAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCCCGAACTAAGCTAGCAGGGAACTCTACCGGTGAAGTTCTGTCTAAGGCTGGAGGGAACTCTCCCGGTGAAGTTCTGTCTAAGGCTGGAGGGAACTCTCCCACTGAAGTTCTATCTAAGGCTGGAGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTGAAGAGTATTTGA

Protein sequence

MEFQSLQLGLATVRAGMAWFEFFGGWFEMVRVGSGQENRAQIFRANLKGLLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLSKAGGNSPGEVLSKAGGNSPTEVLSKAGGLLKSSSLEGSSVFKKSWGLEVLKSI
Homology
[Close]
BLAST of Spg032449 vs. NCBI nr
Match: TYK27281.1 (uncharacterized protein E5676_scaffold244G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 4.7e-09
Identity = 40/68 (58.82%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 64  VEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRT 123
           VEIEL VPD LPK    FRIKLQLF K S V+AA +VC +G    +  DDVCWLHA+ R 
Sbjct: 34  VEIELPVPDTLPK----FRIKLQLFYKPSDVKAASYVCWEGSAGIVRGDDVCWLHAVFRA 93

Query: 124 KLAGNSTG 132
           K AG   G
Sbjct: 94  KTAGGRGG 97

[Close]
BLAST of Spg032449 vs. NCBI nr
Match: KAA0067117.1 (hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ97479.1 hypothetical protein E5676_scaffold598G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-06
Identity = 43/101 (42.57%), Postives = 55/101 (54.46%), Query Frame = 0 

Query: 50  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVR 109
           LL +L +    +A VEIEL VPD LP SA+SF       ++L         LF K S VR
Sbjct: 114 LLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTWLELYFEFVHVEMLFYKPSDVR 173

Query: 110 AALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLSK 137
           AA +VC +G    +  DDVCWLH + R K+AG   G V  +
Sbjct: 174 AASYVCWEGSAGIVRGDDVCWLHTVFRAKIAGGPGGGVTER 214

[Close]
BLAST of Spg032449 vs. NCBI nr
Match: TYK08952.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-06
Identity = 41/92 (44.57%), Postives = 49/92 (53.26%), Query Frame = 0 

Query: 61   SAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQ 120
            +A VEIEL VPD LP SA+ F       ++L         LF K S VRAA +VC +G  
Sbjct: 1316 NAVVEIELPVPDTLPTSAEIFESNSSTWLELYLESVHVEMLFYKPSDVRAASYVCWEGSA 1375

Query: 121  VSLEEDDVCWLHAISRTKLAGNSTGEVLSKAG 139
              +  DDVCWLHA+ R K AG   G V    G
Sbjct: 1376 GIVRGDDVCWLHAVFRAKTAGGPEGGVTGSVG 1407

[Close]
BLAST of Spg032449 vs. NCBI nr
Match: TYK11725.1 (uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-06
Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = 0 

Query: 50  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSL 109
           LL +L +     A VEIEL VPD LP           LF K S VRAA +VC +G    +
Sbjct: 81  LLSTLSVLCDNDAVVEIELPVPDTLP----------TLFYKPSDVRAASYVCWEGSAGIV 140

Query: 110 EEDDVCWLHAISRTKLAGNSTGEVL 135
             DDVCWLHA+ R K+AG   G V+
Sbjct: 141 RGDDVCWLHAVCRAKIAGGPGGGVM 155

[Close]
BLAST of Spg032449 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-05
Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 64  VEIELQVPDKLPKSAKS--------FRIKLQLFTKLSYVRAALHVCLKGQQVSL-EEDDV 123
           +EIEL VPD LP SA+S             +LF K S VR A  +C + +   +  E+DV
Sbjct: 249 LEIELLVPDTLPTSAESSGSNSSTWLEFDFELFYKPSDVRTASRICWEVRSAGIVRENDV 308

Query: 124 CWLHAISRTKLAGNSTGEV 134
           CWLHA+ R K+AG S G V
Sbjct: 309 CWLHAVFRAKIAGGSGGGV 327

[Close]
BLAST of Spg032449 vs. ExPASy TrEMBL
Match: A0A5D3DUB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold244G00490 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.3e-09
Identity = 40/68 (58.82%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 64  VEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSLEEDDVCWLHAISRT 123
           VEIEL VPD LPK    FRIKLQLF K S V+AA +VC +G    +  DDVCWLHA+ R 
Sbjct: 34  VEIELPVPDTLPK----FRIKLQLFYKPSDVKAASYVCWEGSAGIVRGDDVCWLHAVFRA 93

Query: 124 KLAGNSTG 132
           K AG   G
Sbjct: 94  KTAGGRGG 97

[Close]
BLAST of Spg032449 vs. ExPASy TrEMBL
Match: A0A5A7VIY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00400 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.2e-07
Identity = 43/101 (42.57%), Postives = 55/101 (54.46%), Query Frame = 0 

Query: 50  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVR 109
           LL +L +    +A VEIEL VPD LP SA+SF       ++L         LF K S VR
Sbjct: 114 LLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTWLELYFEFVHVEMLFYKPSDVR 173

Query: 110 AALHVCLKGQQVSLEEDDVCWLHAISRTKLAGNSTGEVLSK 137
           AA +VC +G    +  DDVCWLH + R K+AG   G V  +
Sbjct: 174 AASYVCWEGSAGIVRGDDVCWLHTVFRAKIAGGPGGGVTER 214

[Close]
BLAST of Spg032449 vs. ExPASy TrEMBL
Match: A0A5D3CCC7 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00430 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.1e-07
Identity = 41/92 (44.57%), Postives = 49/92 (53.26%), Query Frame = 0 

Query: 61   SAQVEIELQVPDKLPKSAKSFR------IKL--------QLFTKLSYVRAALHVCLKGQQ 120
            +A VEIEL VPD LP SA+ F       ++L         LF K S VRAA +VC +G  
Sbjct: 1316 NAVVEIELPVPDTLPTSAEIFESNSSTWLELYLESVHVEMLFYKPSDVRAASYVCWEGSA 1375

Query: 121  VSLEEDDVCWLHAISRTKLAGNSTGEVLSKAG 139
              +  DDVCWLHA+ R K AG   G V    G
Sbjct: 1376 GIVRGDDVCWLHAVFRAKTAGGPEGGVTGSVG 1407

[Close]
BLAST of Spg032449 vs. ExPASy TrEMBL
Match: A0A5D3CJL4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00370 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.1e-07
Identity = 39/85 (45.88%), Postives = 47/85 (55.29%), Query Frame = 0 

Query: 50  LLFSLVLRTFRSAQVEIELQVPDKLPKSAKSFRIKLQLFTKLSYVRAALHVCLKGQQVSL 109
           LL +L +     A VEIEL VPD LP           LF K S VRAA +VC +G    +
Sbjct: 81  LLSTLSVLCDNDAVVEIELPVPDTLP----------TLFYKPSDVRAASYVCWEGSAGIV 140

Query: 110 EEDDVCWLHAISRTKLAGNSTGEVL 135
             DDVCWLHA+ R K+AG   G V+
Sbjct: 141 RGDDVCWLHAVCRAKIAGGPGGGVM 155

[Close]
BLAST of Spg032449 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-05
Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 64  VEIELQVPDKLPKSAKS--------FRIKLQLFTKLSYVRAALHVCLKGQQVSL-EEDDV 123
           +EIEL VPD LP SA+S             +LF K S VR A  +C + +   +  E+DV
Sbjct: 249 LEIELLVPDTLPTSAESSGSNSSTWLEFDFELFYKPSDVRTASRICWEVRSAGIVRENDV 308

Query: 124 CWLHAISRTKLAGNSTGEV 134
           CWLHA+ R K+AG S G V
Sbjct: 309 CWLHAVFRAKIAGGSGGGV 327

The following BLAST results are available for this feature:
BLAST of Spg032449 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK27281.14.7e-0958.82uncharacterized protein E5676_scaffold244G00490 [Cucumis melo var. makuwa][more]
KAA0067117.11.3e-0642.57hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ9747... [more]
TYK08952.11.7e-0644.57DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
TYK11725.11.7e-0645.88uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa][more]
TYK08801.13.1e-0544.30hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa][more]
BLAST of Spg032449 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg032449 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DUB72.3e-0958.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VIY96.2e-0742.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CCC78.1e-0744.57DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CJL48.1e-0745.88Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3CAC61.5e-0544.30Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Spg032449 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg032449.1Spg032449.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity