Spg032447 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032447
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold2: 29500718 .. 29503027 (+)
RNA-Seq Expression	Spg032447
Synteny	Spg032447

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAACACGCAAAAGCCATCATCATCATGCAAGATCACTCGATCTAAGAGTGCTCGAACCGGCCACGAAGCTGAAGCAAGTGACCGACGGCAAGAGGAGAACCCCGAAACACCCATGCACGGCACGAGAAGGACCAGACCCACGGGATTCTCGCCGGTGATCGTGAACCAAGAACCCAATGCTCAAACTCCCTTTTCTTTGACAATGTTGGCCATGTCGAGGGAGAATCAGAGTTTGTCTACACCGAAAAGGTCCACGCACGCCGCTACCGTCCGCCAAACCCAAAAATTCGCCACTCAACAGTTTAGAAAACGTTCGCGGGAGTGGTTTTCAATGATCCGGGCAATGGGAGCTTAGAGACGTGCTGCTCTTGAAGAAAAGGGAAATAGGCGAGATGAAGAAGTAGCCGCCAAAGCAGCTAGAAGCTCTCGGCAAGAGGGAACATCAGCGGGTAAACATTCCGAACCTTCAACTAACCCCTCTTCGTCTTGCAGGACCAAACCAGTTGTTACCTATAGTGCAAGGAAGAGGAGCCCGAAGAAAGTTGTGCCCGAGAAGCCGCTTGTTATTGAGCCCCTCAAGGTAGCAAGAATTCCACCTGATGTGTTCGAAGGAATAATCCGCCAAGTCGTGGCCAAGGCTCTTGTTATTCCTGAAGGATACAGGGCTGAACAAGAAGCTTTGAAAGAGGTTGAGGCTGAGAGAGAGATGGAAAACCAGCACATGATGGAGGAAGATCAGTCTGCGAGAAAAAGAGATTTTGAAGAAGAGGCAAGACAAGAGGTCGAGAGGGCCAAGTTAGCTGAGGAAGAAGAAAGAAAGTTAGGTGAAAGCCTCAGGAGGGCAGCCATTGACTTACAACTCCTTGAGGAAGAAAAAAAGAGAAGAGAAGAGTTAAAGGAAGATGAAAAAAGAAGGAAGGAAGCCGAAGACTTCCTTGCAGCCTCTAAGCCACTCCACAAGCCTCAAAGTGAAGTTGAATTGCTGCAAGGGAGGATAGAAGAAGAGGCCCAACCGGGGCCAAGTGAAGGAAATTTAGAAAAAGAAAAAGAAAGAAAAGTAGAGATTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGAAGAAGGCCTAGCCGAGGCCACTGAAACTCAACCTCTAGCACCTCTTCGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCACTGACTCAGAGACAGAATCCGATTCAGAGATCAAGGAACTGGATGATGATCGAGTTCCTATCTCTGCGGCATTGAGGAGAAAGAGGAAAAGAGAGATCAAAGCTGAACGGAGGACCAATAACAAGAATGACCCGGTATTTGCCAAAAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTGCAGTTCCTCCTACCATCTCACCCCCCAAGCAAAAGGGCAAATCACCTAAGGCTGCATCTCCTAAGAATCCATTCCCCGAGGTATTTAAAGATGTTAATTTTCAAGAACGGATGGAGATCATGAGAAAAAGGGATTTCCTCAATGAGAAGGGATTCTCTAACAGAACAGGAGCACTACCAGAGTTCGTAAGCAGAGTTATCTCCCAGTACAAGTGGCATGAGTTCTGTGCTCACCCTCAGGAGGCTGTCGTGCCTTTAGTTCTTGAATTTTACGCCGGCCTGAGGGAGGAAAGTATTAGTATGGCGGTGGTGAGAGGCAAGATGGTTAGCTTCTCTCAGTAGACATTAATCGAGTGTACATGATCAAGACACCTCTGAATCCAAGAGGGAACGACGTTATCAAGAACCCCTCGGCCAAGCAGATGAAAGATGCATTAAAACTCGTGGCCAACAAGGGAGTTTAGTGGAAAGAATCCCAAACGAAGGTGAAGACTCTAATGTCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGCTTAAAGCCAACCACCCACGACAGTACGATCTCAGTGGATAGAGTTATGCTACTTTGTTGCATTATGAAGGGGTTGGAGATCAACATAGGGAGCATAATCAGGGATGAATTTTAGCCTGTGGAAGAAAAAGAGCAGGTAAACTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAAAGGGTGAAGATTGTTCCAGGCAAGGACGAGGAACGTCACTTTTTCAAGTCGACCATTGACCTGTCCTTGATCGGGAAGCTCCAACAGAATAGCATCAAAAGGAAAGACAAAGCCTCCACATCTCAGGCCACTCCACCTTCAGGGCCGAGCATGGCTTCGCCGTCCCAACACACTCCTTTTATAGGGACCTGA

mRNA sequence

ATGAAAAACACGCAAAAGCCATCATCATCATGCAAGATCACTCGATCTAAGAGTGCTCGAACCGGCCACGAAGCTGAAGCAAGTGACCGACGGCAAGAGGAGAACCCCGAAACACCCATGCACGGCACGAGAAGGACCAGACCCACGGGATTCTCGCCGGTGATCGTGAACCAAGAACCCAATGCTCAAACTCCCTTTTCTTTGACAATGTTGGCCATGTCGAGGGAGAATCAGAGTTTGTCTACACCGAAAAGACGTGCTGCTCTTGAAGAAAAGGGAAATAGGCGAGATGAAGAAGTAGCCGCCAAAGCAGCTAGAAGCTCTCGGCAAGAGGGAACATCAGCGGGTAAACATTCCGAACCTTCAACTAACCCCTCTTCGTCTTGCAGGACCAAACCAGTTGTTACCTATAGTGCAAGGAAGAGGAGCCCGAAGAAAGTTGTGCCCGAGAAGCCGCTTGTTATTGAGCCCCTCAAGGTAGCAAGAATTCCACCTGATGTGTTCGAAGGAATAATCCGCCAAGTCGTGGCCAAGGCTCTTGTTATTCCTGAAGGATACAGGGCTGAACAAGAAGCTTTGAAAGAGGTTGAGGCTGAGAGAGAGATGGAAAACCAGCACATGATGGAGGAAGATCAGTCTGCGAGAAAAAGAGATTTTGAAGAAGAGGCAAGACAAGAGGTCGAGAGGGCCAAGTTAGCTGAGGAAGAAGAAAGAAAGTTAGGTGAAAGCCTCAGGAGGGCAGCCATTGACTTACAACTCCTTGAGGAAGAAAAAAAGAGAAGAGAAGAGTTAAAGGAAGATGAAAAAAGAAGGAAGGAAGCCGAAGACTTCCTTGCAGCCTCTAAGCCACTCCACAAGCCTCAAAGTGAAGTTGAATTGCTGCAAGGGAGGATAGAAGAAGAGGCCCAACCGGGGCCAAAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCACTGACTCAGAGACAGAATCCGATTCAGAGATCAAGGAACTGGATGATGATCGAGTTCCTATCTCTGCGGCATTGAGGAGAAAGAGGAAAAGAGAGATCAAAGCTGAACGGAGGACCAATAACAAGAATGACCCGGTATTTGCCAAAAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTGCAGTTCCTCCTACCATCTCACCCCCCAAGCAAAAGGGCAAATCACCTAAGGCTGCATCTCCTAAGAATCCATTCCCCGAGGTATTTAAAGATGTTAATTTTCAAGAACGGATGGAGATCATGAGAAAAAGGGATTTCCTCAATGAGAAGGGATTCTCTAACAGAACAGGAGCACTACCAGAGTTCGTAAGCAGAGTTATCTCCCAGTACAAGTGGCATGAGTTCTGTGCTCACCCTCAGGAGGCTGTCGTGCCTTTAGTTCTTGAATTTTACGCCGGCCTGAGGGAGGAAAGTATTAGTATGGCGGTGGTGAGAGGCAAGATGAGGGAACGACGTTATCAAGAACCCCTCGGCCAAGCAGATGAAAGATGCATTAAAACTCGTGGCCAACAAGGGAGTTTAGTGGAAAGAATCCCAAACGAAGGTGAAGACTCTAATGTCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGCTTAAAGCCAACCACCCACGACAGGTGAAGATTGTTCCAGGCAAGGACGAGGAACGTCACTTTTTCAAGTCGACCATTGACCTGTCCTTGATCGGGAAGCTCCAACAGAATAGCATCAAAAGGAAAGACAAAGCCTCCACATCTCAGGCCACTCCACCTTCAGGGCCGAGCATGGCTTCGCCGTCCCAACACACTCCTTTTATAGGGACCTGA

Coding sequence (CDS)

ATGAAAAACACGCAAAAGCCATCATCATCATGCAAGATCACTCGATCTAAGAGTGCTCGAACCGGCCACGAAGCTGAAGCAAGTGACCGACGGCAAGAGGAGAACCCCGAAACACCCATGCACGGCACGAGAAGGACCAGACCCACGGGATTCTCGCCGGTGATCGTGAACCAAGAACCCAATGCTCAAACTCCCTTTTCTTTGACAATGTTGGCCATGTCGAGGGAGAATCAGAGTTTGTCTACACCGAAAAGACGTGCTGCTCTTGAAGAAAAGGGAAATAGGCGAGATGAAGAAGTAGCCGCCAAAGCAGCTAGAAGCTCTCGGCAAGAGGGAACATCAGCGGGTAAACATTCCGAACCTTCAACTAACCCCTCTTCGTCTTGCAGGACCAAACCAGTTGTTACCTATAGTGCAAGGAAGAGGAGCCCGAAGAAAGTTGTGCCCGAGAAGCCGCTTGTTATTGAGCCCCTCAAGGTAGCAAGAATTCCACCTGATGTGTTCGAAGGAATAATCCGCCAAGTCGTGGCCAAGGCTCTTGTTATTCCTGAAGGATACAGGGCTGAACAAGAAGCTTTGAAAGAGGTTGAGGCTGAGAGAGAGATGGAAAACCAGCACATGATGGAGGAAGATCAGTCTGCGAGAAAAAGAGATTTTGAAGAAGAGGCAAGACAAGAGGTCGAGAGGGCCAAGTTAGCTGAGGAAGAAGAAAGAAAGTTAGGTGAAAGCCTCAGGAGGGCAGCCATTGACTTACAACTCCTTGAGGAAGAAAAAAAGAGAAGAGAAGAGTTAAAGGAAGATGAAAAAAGAAGGAAGGAAGCCGAAGACTTCCTTGCAGCCTCTAAGCCACTCCACAAGCCTCAAAGTGAAGTTGAATTGCTGCAAGGGAGGATAGAAGAAGAGGCCCAACCGGGGCCAAAGAAGAGGGATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCACTGACTCAGAGACAGAATCCGATTCAGAGATCAAGGAACTGGATGATGATCGAGTTCCTATCTCTGCGGCATTGAGGAGAAAGAGGAAAAGAGAGATCAAAGCTGAACGGAGGACCAATAACAAGAATGACCCGGTATTTGCCAAAAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTGCAGTTCCTCCTACCATCTCACCCCCCAAGCAAAAGGGCAAATCACCTAAGGCTGCATCTCCTAAGAATCCATTCCCCGAGGTATTTAAAGATGTTAATTTTCAAGAACGGATGGAGATCATGAGAAAAAGGGATTTCCTCAATGAGAAGGGATTCTCTAACAGAACAGGAGCACTACCAGAGTTCGTAAGCAGAGTTATCTCCCAGTACAAGTGGCATGAGTTCTGTGCTCACCCTCAGGAGGCTGTCGTGCCTTTAGTTCTTGAATTTTACGCCGGCCTGAGGGAGGAAAGTATTAGTATGGCGGTGGTGAGAGGCAAGATGAGGGAACGACGTTATCAAGAACCCCTCGGCCAAGCAGATGAAAGATGCATTAAAACTCGTGGCCAACAAGGGAGTTTAGTGGAAAGAATCCCAAACGAAGGTGAAGACTCTAATGTCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGCTTAAAGCCAACCACCCACGACAGGTGAAGATTGTTCCAGGCAAGGACGAGGAACGTCACTTTTTCAAGTCGACCATTGACCTGTCCTTGATCGGGAAGCTCCAACAGAATAGCATCAAAAGGAAAGACAAAGCCTCCACATCTCAGGCCACTCCACCTTCAGGGCCGAGCATGGCTTCGCCGTCCCAACACACTCCTTTTATAGGGACCTGA

Protein sequence

MKNTQKPSSSCKITRSKSARTGHEAEASDRRQEENPETPMHGTRRTRPTGFSPVIVNQEPNAQTPFSLTMLAMSRENQSLSTPKRRAALEEKGNRRDEEVAAKAARSSRQEGTSAGKHSEPSTNPSSSCRTKPVVTYSARKRSPKKVVPEKPLVIEPLKVARIPPDVFEGIIRQVVAKALVIPEGYRAEQEALKEVEAEREMENQHMMEEDQSARKRDFEEEARQEVERAKLAEEEERKLGESLRRAAIDLQLLEEEKKRREELKEDEKRRKEAEDFLAASKPLHKPQSEVELLQGRIEEEAQPGPKKRDEEEKESKEAETSTDSETESDSEIKELDDDRVPISAALRRKRKREIKAERRTNNKNDPVFAKRPRTRSMDASPAVPPTISPPKQKGKSPKAASPKNPFPEVFKDVNFQERMEIMRKRDFLNEKGFSNRTGALPEFVSRVISQYKWHEFCAHPQEAVVPLVLEFYAGLREESISMAVVRGKMRERRYQEPLGQADERCIKTRGQQGSLVERIPNEGEDSNVKRSKARIGSLASLSEEPLKANHPRQVKIVPGKDEERHFFKSTIDLSLIGKLQQNSIKRKDKASTSQATPPSGPSMASPSQHTPFIGT

Homology

The following BLAST results are available for this feature:

BLAST of Spg032447 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032447 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032447 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032447 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 244..275
None	No IPR available	COILS	Coil	Coil	coord: 186..206
None	No IPR available	COILS	Coil	Coil	coord: 216..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 583..616
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032447.1	Spg032447.1	mRNA