Spg032360 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg032360
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold2: 34502387 .. 34510525 (+)
RNA-Seq ExpressionSpg032360
SyntenySpg032360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGAGATATTGAGCCCGAGGCTATATGGAACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCATGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATCGGAGTGCTGGGCAGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACAAAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATATACTTGATATGCCTTGCTAGATTCTTAATGACGGACTTGCGAAATGTTTTAGAAAGCCTTTATCCTTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCAGATTTAGAGTTTTAAAATTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCTAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTATAATATCGTCCTAGAGGTCGTGGATGTATAACCCTAGTTGTGTATGTTTTGGTCGTGATATCTATATTAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTTCCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTTTCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAGCACCGTGGGAAAAGAGACATGGTAGTTAGTGCTAAAAAAAATCCAGGAAGTAAATAGTTAGACGTTGGGTCAGTTCAGATAGAACTAGCGGAGTATGGTCCGAGTATTGTCGAGAGTGAGTCCAGTCAGGACTAGAATGTGGGTATAAGTTTAGTATCATGCATCTGAGTGAAGTATCTATAGCATGTCTGATGTGTTGATATGTTATAGGAGTCATGCCACCACGTCCCAGCAGACGACGCAGGCATAATCATTACGGGACGCAGGATCCTACCCAAAGTCAATCTGAAAGGGGATCCAGTACCCCGAGAGGTCAGGATGAGGCAGGGAGTGAGCGATTTGCTAGATCTGCACAGGAGATCGGTAGGCCAGAGAGAGCAGGGCCTAGTGATCCGGAAAAGATGTATGGGATAGAACGGTTGAAGAAGTTAGGAGCCGCAGTGTTTGAGGGTTCCACGGATCCAGCTGACGCCGAGGTCTGGTTGAATATGCTGGACAAATGCTTCGACGTGATGAGTTGTCCTGAGGAGCGAAAAGTCAAATTAGCCACATTCCTTTTGCAGAAGGAGGCGGAGGGATGGTGGAAGTCCATTATAGCCAGGCGCTGTGATGCACGTACGTTAGTTTGGCAGACATTCAGGGGCATATTCGAGGAAAAGTACTACCCCACCACATATTGTGAGGCGAAGAGAGATGAGTTTCTGGAGCTGAAACAAGGGTCACTTTCAGTGGCCGAGTACGAGAGGAAGTATACTGAGCTTTCACGGTATGCTGAAGTGATTGTGGCATCGGAGTGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGATACGTACCCCAGTTACCGCTATTGCCAAGTGGACGGATTTTTCCCAGCTAGTAGAGACTGCTTTATGTGTGGAGCAGAGTATTATAGAGGAAAAGTCGGCAGTGGAGCCTAGTCGTGGAGCTCCAACAGCTAGTGGTTTTCGAGGCCGTGAGCAGCGGAGGTTCACACCCGGAGTGAATGTTTCAGGCCGTCAAGACTTCAAGCGCCGATCTGGTGGCCAGTTGTCGAGGCAGATGAGTTCGGGTAGTGCTTATCAGAGGCAGAGTCAGAGAGCCCCCAGTCAGTCTGCGAGATCAGTAGCAAGACCGCGAACAGGTCAGGAGTCCGTTGCTAGTGAATCCAGGAGAACCCCATGTGTAAGTTGTGGCAAGAATCATCAGGGTCAATGTCTTGTTGGTGCCGGTGTGTGTTACCAGTGTGGACAACCAAGGCATTTCAAGAGGGATTGCCCACAGCTGAGGGCAGCAGTTCAGAGGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAACCGAGAATCCCAGCAGCCGCAGGAGAGGGAACCAGTGGTGCAAGGCAAAAAGGAGTTGTGGGGAGACCTAGGCAGCAGGGAAAAGTCTACGCCATGACTCAACAAGAAGCAGAGGATGCACCAGATGTGATCACTGGTACGATTTTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGCGCTACGCATTCCTTTGTTTCTAGTATGTTTTTAACTAAGCTAAATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATGCACTCCAGTTGGTGACATTTTATTAGTTAATGAGGTGTTGCGTGATTGTGAGGTTGTAGTAGAAGGTCTCTGTATGCTAGTGGATCTTCTTCCCCTAGAGTTGCAGGCGTTGGATGTGATTTTGGGAATGGATTTCTTATTCACACACTATGCTTCTATGGATTGCCATAGGAAGGAAGTGACTTTTAGGAAACCAGGTTCGACTGAAGTTGTTTTCAGGGGTGAGAGGAAGATTATTCCTACGAGTTTGATTTCAGCTCTGAAAGCTGAGAAGTTGTTGAGGAAAGGTTGCACAGCGTTTCTTGCGCACGTAGTAGAGGTGCAAGAAGAAAAGCTGAAACCAGAAGATGTTCCTGTGGTGAACGAATTTCTTGATGTTTTCCCAGCTGATTTATCGGGTTTGCCACCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAACATCACCTATTTCACAGGCACCATACAGGATGGCTCCGAGCGAGCTGAAGGAGTTGAAGGTGCAGTTTCAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTATCACCTTGGGGAGCTCCAGTGTTATTCGTGAAGAAGAAAGATGGTACCCTGAGATTGTGCATTGATTACAGGCAGTTAAACAAAGTCACAATACGTAACAAGTATCCTCTACCACGCATCGATGACTTGTTTGACCAGTTAAGGGGCGCAGCGGTGTTCTCTAAGATTGATCCGAGGTCAGGATACCACCAGTTGAAGGTTAAGGAATCAGATATTCCTAAGACAGCATTTAGGACGAGGTATGGGCACTATGAGTTTTTAGTAATGCCATTCGGTTTAACGAATGCGCCAGTAGTTTTCATGGACCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATAGTGTTCATCGATGACATACTAGTTTACTCAATTGACAGGAAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACATTACGTGATAAACAACTATACGCTAAGTTTAGCAAATGTGAGTTCTGGTTGAATCAAGTGGTGTTCTTAGGGCATGTAGTTTCAGCAGACGGAGTTAGTGTTGACCCGCAGAAAGTGGAAGCTGTTGTCAACTGGGAGAGACCAGCTAGTGCAACATAGGTACATAGTTTCCTAGGCCTAGCCGGATACTACAAACGTTTTGTTGAGGATTTCTCAAGGTTAGCATTACCCTTGACAGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCGGATAAATGCGAACAAAGTTTCCAGGAGCTCAAAAAGAGATTGGTGATAGCGCCTATTCTGACACTTCCTGTAACAGGGAAGGAGTATGTGATCTATTGTGATGCTTCGAGGCAAGGATTAGGTTGCGTGCTGATGCAGGAAGGAAAGGTGATAGCTTATGCTTCAAGGCAGTTGAAGAAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTGAAGATCTGAAGACATTATTTATTCGGTGAGAAGTGCCACATTTTCACAGATCATAAGAGTTTGAAGTACATCTTTGATCAGAAAGAGCTGAATCTGAGGCAGAGGCGATGGCTAGAACTGATTAAAGACTATGACTGTACCATAGAATATCATCCAAGTAAGGCTAACGTGGTAGCAGATGCGCTGAGTAGGAAGTCGAGACTTCCGAAGAGTGCCTTGTGTGGTATTTGAGCAAGCTTGCTATGTGAGTTACGAGGTTTCAAGGCAGTTATGACTGCAGGAAGCTCAGGGAGTCTTTTAGCTCAATTTCAAGTTAGGTCTTCTCTAGTAGCAGAGATTGTGAGAAGACAGCCAGAGGATAGTAACTTACAGAAGATGCTTGCAAAGTCCAAGCAAGGCCCAGAGGTAGAATCTGAGTTGAGAACAGACGGAGCCATAGTTAAGCAGGGCAGACTATGCGTTCCGAGTATTAGTGAGCTTAAGAGTGCTATATTAGAGGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGAAGCACCAAGATGTATAGAACTCTGAAGAAAACTTATTGGTGGCCTGGTATGAAGCGGGAGATAGCTGAGTATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCAGTGAGATAGAGGCCAGGAGGACTCCTTAATCCACTGCCAATGCCGGAGTGGAGGTGGGAGCATATTACTATGGATTTTCTGTTTGGATTACCTCGTACTTCTAGGGGACATGATGGTATATGTGTAATAGTGGATAGACTCACGAAGACAGTGCGGTTTATACCGATTAAAGCGACGTCTACACTAGATCAGCTAGCTAAACTATACGTCGACAGGATTGTGAGTCAACATGGAGTTCCAGTGTCCATAGTTTCAGATAGGGATCCAAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAGAAAGCAATGGGAACAAAGTTGAAATTCAGTACAGCGTTCCATCCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAGAGGACATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAGTTGGGATACTCAGTTATCACTTATGGAGTTCGCTTATAATAACAGCTATCAGTCTAGTATCGGCATGGCACCATTCGAGGCTTTGTATGGAAGACCATGCAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAGCGATAGCTAGTTGGTCCTGAGTTGGTACAAGTTACGTCAGACAATACTAAGCGGATTAGGGAGAATCTGAAAATAGCTCAGGATCGACAGAAGAGCTATGCAGATAAGCGACGAAGAGACTTAGAGTTCCAGGTTGGAGATCAAGTTTTCTTGAAGTTATCTCTGTGGAAAGGTGTTCTTCGCTTTGGGAGGAAAGGTAAGCTGAGTACTAGATATATTGGACCTTACCAGATAATAGAACGAGTTGGACCAGCAGCCTATAGACTTGAGTTGCCAGTGGAACTCGCTCGAATACATGATGTTTTTCATGTGTCCATGTTGAGGAAATATATTCCAGATCCATCACCTGTTTTGCAAGGGCAACCGATTGAATTGAAAGAAGACTTGAGTTATAAAGAGGAAGCGGTTCAGATCCTCGACAGAAAGGAGCCAGTTTTGAGGAACAAAACGATCCCACTCGTGAAGGTTCTTTGGAGACATCACGGAGTTGAGGAGGCAACTTGGGAATCGGAAGATCAAATGAGGAGGAGTTACCCGACACTCTTCACCTAAGAACTTCTAAATTTCGAGGACGAAATTTCATAAGGGGGAGGTAAGTTGTAAACCGGAGACTTTCCCTTAGATAATTTTCTCTTATCATCTATTGTGGCTTCATGGTTGAATCTAAGTTGTTGGAAATTATACACTTAAAAAGAAAGGAGATGGGAAAGAAGAAAAGAAAATAAATGGAAAAGGAAAAGGAAAAGGAAAAAGGAAAAAAAAAAAAGAAAAGAAATGAAGTGGGAATGGACAGTAAGAAGGGCACCACCGACTAGCATTCTTATCAGCCCATTATCAGCCTCATTTCTCATCCTTTTCCACTAAAAATTTCAGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAGTCAAGAGGTGAGATTTGATTTTCTTGAAAGTTAGTTCATTTTCTAACAAATTTCATGAAGGAAGCTTGACCTAAATCGTATGATAAGTTGATGGTTTTTGGAATGGAAAACAGAGCACAGGAGTTTCGAGAAAAGCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTATGGTTAGAAAGCTTATTAAATTATCTACAACTTTCATGAAGAATTCGTGAGCCAAAAAGGACTTGAAGTAGGTTTAATTTCAGGAGGAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGAATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTGTGATGTGTATTTCATTAATTTTGGTTAAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAGAGTAGAGTGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCAAAGAGGAAATAGGTTGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAATGTTCTTAAACGGTTGTTCATGATTATATGTTTTACATGCTTTCCTATGAATGATACATGGTTTTTATGAACGGTTTCAAGCATGAGTTTTGAGCTCAGATTTTCTAATGAGGTTTATATACGAGCACGTGTCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGCAAAGTATGGATTAGCGAGTACTTCTAAATGATTTTCGGTTTTCCACGGGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGAAATTGAGCTCGAGGCTATATTGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGATTCCACTACGACAAAGACAATGGGAGTGCTGGGTGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACGACGTAGATCGGTCATGTTAGTTAAAACGTTTGATATACTTGATATGCCTTGCTAGATTCTTAATGACGGACTTGCGAAATGTTTTAGAAAGCCTTTATCCTTACACGTTTATGTTCAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCAGATTTAGAGTTTTAAAATTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTTTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATTTTTTGTAAGGGTTGTATAATATCGTCCTAGAGGTCGTGGATGTATAACCCTAGTTGTGTATGTTTTGGTCGTGATATCTATATCAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTTCCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTTCAGTAGGGTCAATAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACATAA

mRNA sequence

ATGACTGAGATATTGAGCCCGAGGCTATATGGAACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCTAGTACGTGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTTTCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAGTCAAGAGGCAAAGAGGAAATAGGTTGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTTTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTACTTTCCAAACCAGGTTCAACGTTTCAGTAGGGTCAATAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACATAA

Coding sequence (CDS)

ATGACTGAGATATTGAGCCCGAGGCTATATGGAACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCTAGTACGTGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTTTCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAGTCAAGAGGCAAAGAGGAAATAGGTTGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTTTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTACTTTCCAAACCAGGTTCAACGTTTCAGTAGGGTCAATAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACATAA

Protein sequence

MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSTWFNVSVGSTGIVRGDDVCFLHAVFRAKLAGGPGGGSEINLSTSGFLFGLSYTEGVKRQRGNRLSLQTGELDKTVEIELPVPDTLPTFAESSRSSSSTWLELYIESVTFQTRFNVSVGSIGIVRGDDVCWLHAVFRAKLAGGPGGGVT
Homology
[Close]
BLAST of Spg032360 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-28
Identity = 80/132 (60.61%), Postives = 83/132 (62.88%), Query Frame = 0 

Query: 86  LFGLSYTEGVKRQRGNRLSLQTGELDKT-----------------VEIELPVPDTLPTFA 145
           LFGL Y EG KR RGNR SLQTGELDKT                 VEIELPVPDTLPT A
Sbjct: 19  LFGLGYPEGTKRPRGNRTSLQTGELDKTVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSA 78

Query: 146 ESSRSSSSTWLELYIESVTFQ--------------TRFNVSVGSIGIVRGDDVCWLHAVF 187
           ESS S+SSTWLEL  E V  +                FNVSVGS  IVRGD+VCWLHAVF
Sbjct: 79  ESSGSNSSTWLELNFEFVHVEIFYYFTNQVMSGLHLVFNVSVGSTRIVRGDNVCWLHAVF 138

[Close]
BLAST of Spg032360 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-27
Identity = 77/118 (65.25%), Postives = 80/118 (67.80%), Query Frame = 0 

Query: 99  RGNRLSLQTGELDKTV---------------EIELPVPDTLPTFAESSRSSSSTWLELYI 158
           RGNRLSLQTGELDKTV                IELPVPDTLPT AESS S+SSTWLELY 
Sbjct: 64  RGNRLSLQTGELDKTVIFSLSTLSVLRDNNAVIELPVPDTLPTSAESSGSNSSTWLELYF 123

Query: 159 ESV------TFQTR--------FNVSVGSIGIVRGDDVCWLHAVFRAKLAGGPGGGVT 188
           ESV      +F  +        FNVSVGS GIVRGDDVCWLHAVFRAK  GGPGGGVT
Sbjct: 124 ESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

[Close]
BLAST of Spg032360 vs. NCBI nr
Match: TYK05030.1 (uncharacterized protein E5676_scaffold143G002850 [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-27
Identity = 110/292 (37.67%), Postives = 125/292 (42.81%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAES-SRSSSSTW- 60
           MTEILS +LY TVCT                  VEIELPVPDTLPTSAES +++    W 
Sbjct: 1   MTEILSLKLYSTVCTHVIFPLSTLSVLSDNDAVVEIELPVPDTLPTSAESFNQTPVRGWS 60

Query: 61  -------------FNVSVGSTGIVRGDDVCFLHAVFRAKLAGGPGGG-------SEINLS 120
                        FNVSVGS GI+RGDDVC+LHAVFRAK+AG P GG        E    
Sbjct: 61  CILSLFMLKCFVRFNVSVGSIGIIRGDDVCWLHAVFRAKIAGSPRGGVTTWQNQDETQDP 120

Query: 121 TSG-FLFGLSYTEGVKRQRGNRLSLQTGELDKTVEIELPVPDTL----------PTFAES 180
           T G    G S   G    R  R +    E+ +        P+ +           T  ES
Sbjct: 121 TQGQSERGSSTPRGQNEARSERFARSAQEIGRPEIAGPSDPEKMYGIERLKKLGATVFES 180

Query: 181 S----------------------------------------------RSSSSTWLEL--- 188
           S                                               +    +LEL   
Sbjct: 181 STDPADVEKKVEGWWKSIIVRHNDARTLDWQTFKGIFEEKYYPTIYCEAKRDEFLELKQG 240

[Close]
BLAST of Spg032360 vs. NCBI nr
Match: KAA0058280.1 (uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa])

HSP 1 Score: 127.9 bits (320), Expect = 9.3e-26
Identity = 75/118 (63.56%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 99  RGNRLSLQTGELDKT---------------VEIELPVPDTLPTFAESSRSSSSTWLELYI 158
           RGNRLSLQT ELDKT               V IELPVPD LPT AESS S+SSTWLELY 
Sbjct: 79  RGNRLSLQTRELDKTVIFPLSTLSVLRDNNVVIELPVPDILPTSAESSGSNSSTWLELYF 138

Query: 159 ESV------TFQTR--------FNVSVGSIGIVRGDDVCWLHAVFRAKLAGGPGGGVT 188
           ESV      +F  +        FNVSVGS GIVRGDDVCWLHAVFRAK  GGPGGGVT
Sbjct: 139 ESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 196

[Close]
BLAST of Spg032360 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-25
Identity = 75/134 (55.97%), Postives = 85/134 (63.43%), Query Frame = 0 

Query: 86  LFGLSYTEGVKRQ----------------------RGNRLSLQTGELDKTVEIELPVPDT 145
           LFGLSY E ++ +                      RGNR +L TG+LDKTVEIELPVPDT
Sbjct: 45  LFGLSYLEELRGESTRFLSKSGGFLVFSDALSILPRGNRPNLHTGKLDKTVEIELPVPDT 104

Query: 146 LPTFAESSRSSSSTWLELYIESVTFQTRF----NVSV-------GSIGIVRGDDVCWLHA 187
           LPT AESS+S+SSTWLELY ESV  +  F    +V V       GS GIVRGDD+CWLHA
Sbjct: 105 LPTSAESSKSNSSTWLELYFESVHVEMLFYKPSDVRVASYVCWEGSAGIVRGDDLCWLHA 164

[Close]
BLAST of Spg032360 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28
Identity = 80/132 (60.61%), Postives = 83/132 (62.88%), Query Frame = 0 

Query: 86  LFGLSYTEGVKRQRGNRLSLQTGELDKT-----------------VEIELPVPDTLPTFA 145
           LFGL Y EG KR RGNR SLQTGELDKT                 VEIELPVPDTLPT A
Sbjct: 19  LFGLGYPEGTKRPRGNRTSLQTGELDKTVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSA 78

Query: 146 ESSRSSSSTWLELYIESVTFQ--------------TRFNVSVGSIGIVRGDDVCWLHAVF 187
           ESS S+SSTWLEL  E V  +                FNVSVGS  IVRGD+VCWLHAVF
Sbjct: 79  ESSGSNSSTWLELNFEFVHVEIFYYFTNQVMSGLHLVFNVSVGSTRIVRGDNVCWLHAVF 138

[Close]
BLAST of Spg032360 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27
Identity = 77/118 (65.25%), Postives = 80/118 (67.80%), Query Frame = 0 

Query: 99  RGNRLSLQTGELDKTV---------------EIELPVPDTLPTFAESSRSSSSTWLELYI 158
           RGNRLSLQTGELDKTV                IELPVPDTLPT AESS S+SSTWLELY 
Sbjct: 64  RGNRLSLQTGELDKTVIFSLSTLSVLRDNNAVIELPVPDTLPTSAESSGSNSSTWLELYF 123

Query: 159 ESV------TFQTR--------FNVSVGSIGIVRGDDVCWLHAVFRAKLAGGPGGGVT 188
           ESV      +F  +        FNVSVGS GIVRGDDVCWLHAVFRAK  GGPGGGVT
Sbjct: 124 ESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

[Close]
BLAST of Spg032360 vs. ExPASy TrEMBL
Match: A0A5D3C0X3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002850 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.1e-27
Identity = 110/292 (37.67%), Postives = 125/292 (42.81%), Query Frame = 0 

Query: 1   MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAES-SRSSSSTW- 60
           MTEILS +LY TVCT                  VEIELPVPDTLPTSAES +++    W 
Sbjct: 1   MTEILSLKLYSTVCTHVIFPLSTLSVLSDNDAVVEIELPVPDTLPTSAESFNQTPVRGWS 60

Query: 61  -------------FNVSVGSTGIVRGDDVCFLHAVFRAKLAGGPGGG-------SEINLS 120
                        FNVSVGS GI+RGDDVC+LHAVFRAK+AG P GG        E    
Sbjct: 61  CILSLFMLKCFVRFNVSVGSIGIIRGDDVCWLHAVFRAKIAGSPRGGVTTWQNQDETQDP 120

Query: 121 TSG-FLFGLSYTEGVKRQRGNRLSLQTGELDKTVEIELPVPDTL----------PTFAES 180
           T G    G S   G    R  R +    E+ +        P+ +           T  ES
Sbjct: 121 TQGQSERGSSTPRGQNEARSERFARSAQEIGRPEIAGPSDPEKMYGIERLKKLGATVFES 180

Query: 181 S----------------------------------------------RSSSSTWLEL--- 188
           S                                               +    +LEL   
Sbjct: 181 STDPADVEKKVEGWWKSIIVRHNDARTLDWQTFKGIFEEKYYPTIYCEAKRDEFLELKQG 240

[Close]
BLAST of Spg032360 vs. ExPASy TrEMBL
Match: A0A5A7UT17 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006090 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.5e-26
Identity = 75/118 (63.56%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 99  RGNRLSLQTGELDKT---------------VEIELPVPDTLPTFAESSRSSSSTWLELYI 158
           RGNRLSLQT ELDKT               V IELPVPD LPT AESS S+SSTWLELY 
Sbjct: 79  RGNRLSLQTRELDKTVIFPLSTLSVLRDNNVVIELPVPDILPTSAESSGSNSSTWLELYF 138

Query: 159 ESV------TFQTR--------FNVSVGSIGIVRGDDVCWLHAVFRAKLAGGPGGGVT 188
           ESV      +F  +        FNVSVGS GIVRGDDVCWLHAVFRAK  GGPGGGVT
Sbjct: 139 ESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 196

[Close]
BLAST of Spg032360 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.9e-26
Identity = 75/134 (55.97%), Postives = 85/134 (63.43%), Query Frame = 0 

Query: 86  LFGLSYTEGVKRQ----------------------RGNRLSLQTGELDKTVEIELPVPDT 145
           LFGLSY E ++ +                      RGNR +L TG+LDKTVEIELPVPDT
Sbjct: 45  LFGLSYLEELRGESTRFLSKSGGFLVFSDALSILPRGNRPNLHTGKLDKTVEIELPVPDT 104

Query: 146 LPTFAESSRSSSSTWLELYIESVTFQTRF----NVSV-------GSIGIVRGDDVCWLHA 187
           LPT AESS+S+SSTWLELY ESV  +  F    +V V       GS GIVRGDD+CWLHA
Sbjct: 105 LPTSAESSKSNSSTWLELYFESVHVEMLFYKPSDVRVASYVCWEGSAGIVRGDDLCWLHA 164

The following BLAST results are available for this feature:
BLAST of Spg032360 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0051980.12.6e-2860.61DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 D... [more]
TYK11835.12.2e-2765.25uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa][more]
TYK05030.18.4e-2737.67uncharacterized protein E5676_scaffold143G002850 [Cucumis melo var. makuwa][more]
KAA0058280.19.3e-2663.56uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa][more]
KAA0052218.11.2e-2555.97uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0... [more]
BLAST of Spg032360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg032360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U9X41.3e-2860.61DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CJX31.1e-2765.25CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5D3C0X34.1e-2737.67Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7UT174.5e-2663.56CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7UAH65.9e-2655.97CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
BLAST of Spg032360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg032360.1Spg032360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016740 transferase activity