Spg032331 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg032331
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMuDRA-like transposase
Locationscaffold2: 35526653 .. 35530299 (-)
RNA-Seq ExpressionSpg032331
SyntenySpg032331
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATGCTGCATACGCAATCAGCCCTCTAACGCTCGAGTTCGAGCTCTAGGGAACGCGAAAACTGTTTTCTTTTTTCTTTTTTTTTTTTCGAAAATCCGCGTGCAAAAATTGCTCCAAAATTTAAAATAATACGACATCAGTTACGTTCAATCCCGTGACCTCGTGGAGAATAGGCAAACGCCACAGCCGCCCAGAGAAGTGCTGGTTTCAAATCCTACATTGCGCAGTTTTATTTTTGGGCAATTGGGACTTAAGGGCCATTTTCATTGTTGTTTTGTAAAAATGGGCCCCATTTTGAAATTCACTTAATTGGGAACCCTTTGCTGACTTTAATGATGTCAGCAAAGGTGTAAAAAGACTATTTTAGCCCCTCTTCAATTCAAAATAGGAAAAGGTAATTTCCTCCACCAACCACATTAATTACCAACCAATATTTTCCATCAATCAATGATCTCCCTTAATGAATAAGGATTTGGAATGTAAAGAACATTCTCATTCTTATTCTCATTCCTTTTCGTTTTTGTCCTTTGGTCCCCACACAACATTCTTTGATCCCCACACAACGATTTTGTCACGTTCATCACGTTTTGGATTGCTCGATCACATTCAAAACACTTGCAACATTCGAGTTTCTGAAGGAGGTATGTACATTCAAGTTTTGACCATTATTTACGTACGTTCGTGGTTTTCAAAAAAGATTACGTTGTCGCTGCCGGGAAGCATACTTTAAGCATCCCGCCCGGGAATTAGTACCGAGAACCGAGAAAATGTACAGTTGCTAATTTTTTTTTCGTTCGTTCGTGCAGATAATGCCTTGTGTGTGGGTTTGTTATGGTGGTTTGTGGAATGAGAGGGACAAGGAATATGATGGTGGAGAGTTGAGGGGTTTCGACATAGACATTGATAGTGCATATAGTGACTTCTTAAGTCGATTATATGCATTGACCAGTATAAATTCAGAGGAATTTGACCTTACAATAAGATGTGTACTCCAATTGATGGTCAAGGCACCCACGTTTGTTATTAGGAACGATGAAGACCTTAACACCTTCTTGACCTGGAATAGGGTCTCTGACGTACCCATATACATATCCACAATCCCAAAGTGTCCTAGTAACCAAGCCTCGCGACCATTTCCCATCCCATGCGCCATGCCAAATAATCCATATAAGGTGGAACAGAATTTATCATCGGCATCGGTCCCAAACAATATACCATCGGCATCTACATCCTTCCCATGCGATGAATCAAAAAATATTCCTGTGTATAACTTGGGGGACGATGAAGACCATGGTAGTGAACTTTATGGTGGCTAAGATTGGGGGGACTACGGACATGATGAGGAGTACGATGATGACGAGGACACAGACACGGAGGTTGATGTAGCTGTGGGAGATGATGAGGAAGAGATTCACGTACGATACACTGAGGTTCCTTCTGCGCCTGAACAGGTGGCGACATGCTCTTCCGTTCCAAATGCTTCATCGAAGGCAATCATCATGACAGGTCAGTCTTCCTCTTCTGAAGATGTAGAAGTTGGAGAAGTATTCATGTGTAAAAGAGACTTGTACATGAGAATGTCTGTGATTGCAATGAGAAGGAATTTCCAGTTTAGGGTTAAAAAGTCAAAGAAGAACATATGGGTAGCTAACTGTGTAATTGAAGGATGCAAATGGAGGGTTCGAGCTATGAGTGTTACTAAGGGGTGTGAAATATTTAAGATCACGAAGTACTGCAATATTCATACCTGTGTACGTGAAATGTTGACAGATGATCATAGGCAGGCCAAGAGTTGGGTTATTGGAAATTTGATCAAGTCGAGGTTCCAAGACGTCGGTCGTACTTATAGGCCAAAGGATATTGTGAACGATATTAGACAAGATTTTGGTGTGAATTTAAGCTATGACAAGGCTTGGCGGGCTAGAGAAGAAGCTTTTATTCTTGCTAGAGGGTCTCCAGAAGAATCTTATAGACTGTTACCGAGATTTGGTGAAGCATTGAAAATCGAAAATCTCGGTACAGTGTTCGACTTAGAACTTGAAGATGATGGACACTTTAAGCATGTGTTTATGGCACTAGGTGCTTCTATTGGAGGGTTCAAGAGCTCCATTCGTCCAATGCTAGTAGTTGATGGAACACACTTATGGGGAAAATTTTGTGGGAAACTACTTCTTGCGACCGGTGTAGATGGAAACAACCAGTTATATCCTGTAGGGTGGGCCTTTGCCGGGGGAGAAACTGATCAATCATGGACGTACTTTTTTCGACAGATGGAACGTGCAGTTGGACAGGTTCCTAGTCTGGTCATTGTGTCTGATAGACATGCCAGCATCGGTAAGGCGGTGAAAACTGTGTTCCCTAATGCATTTCACTGCGTGTGTATCCGGCACTTAGGGGAGAACCTGAAAACGCATTTTAAGACCGGGAACTTTATGAAAGTATTTGACGGAGCTGCTAGGGCATTTCGTGTGGTTGAATTCAATGAGTACTGGCAGCAACTACCAGAAAATATCAGGACATACCTACAGGGGGTTGGAGTTGAGAGGTGGGCTCGAGCATACCAGTGTGGTCGTCGGTATAACCAAATGACCACCAATCTTGCGGAGTGCACTAACTCAGTGTTGAAAGATGCACGAGAGCTCCCAATCACCGCATTCATGGATCATATCAGAGGGTGGCTCCAAGCAAAATACTACAAACGTAGGAATAAGCACTCCAGTAACCCGAGCCAGTGGTCGAAGTTTGCTACAGAAATCATGGAAAAAGTAGAGGAGAAGGCAAGGAGGCACGTGGTTAAACCTATTGCTCGATATGAGTTTTAGGTCGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACATGCACCTGTCGTGAATTTGAGTATTACGAACTTCCATGCTCCCATGCGATCGCTGCATGCACTTATCGACATATCGAATATCATACTCTTTGTTCCAAAGTCTACCATGTGGACTCTTTGATAGATGCATATGCACAACCCATACAACCCCTTGGGCATGAGTCGGAGTGGAAGAGATCACCTCAGTTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGCCTAGGGTTTGTCGTCGTCAGACGTTGAGAATACCGTCTATGGGAGAAGTGCAGCATGTCCGCAAATGCAGCCGGTGCGGGAATAGGGGTCATAACAGAAAAACATGCAGACAACCACTGAACAATTCTTGATGTTTTTTTGTACGACTATTTTGACATGAATTTTTGTTTCCTGGATGTTTTAGACATGAATTTTATTACATTTCTCTATTTTGAAGTATCTATTTTATATCCGTTCATCATTTATTTTATATAAATAAAAGGAAAAAAAGAGGCATAATACTCTCACTGTCATTTTTCCCGGTCTAACGAGACCGAGAACGGAACCGAGAACGGGACCGAGAAAAATGAAAAATGACAGTGGGTTCTTACCTTCTAAATGTCGGTAGCATCTTACTGTCAAATTTCCCGGTCCACGAGACCGGGATCGAGACCGAGAATGGGATCGGGAAAATTGACAGTGGGTTCCAACTTCCTGTATGTTGTGAGCCTCTCTTTGTCAATGTTCCCGGCCGAAATCGTGACCGGGAAGAGCGGGGAATTTGGCAGTGA

mRNA sequence

ATGCAATGCTGCATACGCAATCAGCCCTCTAACGCTCGAGTTCGAGCTCTAGGGAACGCGAAAACTATAATGCCTTGTGTGTGGGTTTGTTATGGTGGTTTGTGGAATGAGAGGGACAAGGAATATGATGGTGGAGAGTTGAGGGGTTTCGACATAGACATTGATAGTGCATATAGTGACTTCTTAAGTCGATTATATGCATTGACCAGTATAAATTCAGAGGAATTTGACCTTACAATAAGATGTGTACTCCAATTGATGGTCAAGGCACCCACGTTTGTTATTAGGAACGATGAAGACCTTAACACCTTCTTGACCTGGAATAGGGTCTCTGACGTACCCATATACATATCCACAATCCCAAAGTGTCCTAATTGGGGGGACTACGGACATGATGAGGAGTACGATGATGACGAGGACACAGACACGGAGGTTGATGTAGCTGTGGGAGATGATGAGGAAGAGATTCACGTACGATACACTGAGGTTCCTTCTGCGCCTGAACAGACCGGGATCGAGACCGAGAATGGGATCGGGAAAATTGACAGTGGGTTCCAACTTCCTGTATGTTGTGAGCCTCTCTTTGTCAATGTTCCCGGCCGAAATCGTGACCGGGAAGAGCGGGGAATTTGGCAGTGA

Coding sequence (CDS)

ATGCAATGCTGCATACGCAATCAGCCCTCTAACGCTCGAGTTCGAGCTCTAGGGAACGCGAAAACTATAATGCCTTGTGTGTGGGTTTGTTATGGTGGTTTGTGGAATGAGAGGGACAAGGAATATGATGGTGGAGAGTTGAGGGGTTTCGACATAGACATTGATAGTGCATATAGTGACTTCTTAAGTCGATTATATGCATTGACCAGTATAAATTCAGAGGAATTTGACCTTACAATAAGATGTGTACTCCAATTGATGGTCAAGGCACCCACGTTTGTTATTAGGAACGATGAAGACCTTAACACCTTCTTGACCTGGAATAGGGTCTCTGACGTACCCATATACATATCCACAATCCCAAAGTGTCCTAATTGGGGGGACTACGGACATGATGAGGAGTACGATGATGACGAGGACACAGACACGGAGGTTGATGTAGCTGTGGGAGATGATGAGGAAGAGATTCACGTACGATACACTGAGGTTCCTTCTGCGCCTGAACAGACCGGGATCGAGACCGAGAATGGGATCGGGAAAATTGACAGTGGGTTCCAACTTCCTGTATGTTGTGAGCCTCTCTTTGTCAATGTTCCCGGCCGAAATCGTGACCGGGAAGAGCGGGGAATTTGGCAGTGA

Protein sequence

MQCCIRNQPSNARVRALGNAKTIMPCVWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQLMVKAPTFVIRNDEDLNTFLTWNRVSDVPIYISTIPKCPNWGDYGHDEEYDDDEDTDTEVDVAVGDDEEEIHVRYTEVPSAPEQTGIETENGIGKIDSGFQLPVCCEPLFVNVPGRNRDREERGIWQ
Homology
[Close]
BLAST of Spg032331 vs. NCBI nr
Match: XP_022155431.1 (uncharacterized protein LOC111022579 isoform X1 [Momordica charantia])

HSP 1 Score: 88.2 bits (217), Expect = 9.3e-14
Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           ++V YGG+WN++  EY GG L+G  +  +  Y D L  LYALT  + +E D+ I+C+ ++
Sbjct: 6   IFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLDELYALTEADPKESDMKIKCIYEI 65

Query: 87  MVK--APTFVIRNDEDLNTFLTWNRVSDVPIYISTIPK 123
             +   P F I ND DLN +L     S+VP+YIS  P+
Sbjct: 66  KARNQTPPFEISNDRDLNFYLMGEDTSEVPLYISFEPR 103

[Close]
BLAST of Spg032331 vs. NCBI nr
Match: XP_022155432.1 (uncharacterized protein LOC111022579 isoform X2 [Momordica charantia])

HSP 1 Score: 88.2 bits (217), Expect = 9.3e-14
Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           ++V YGG+WN++  EY GG L+G  +  +  Y D L  LYALT  + +E D+ I+C+ ++
Sbjct: 6   IFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLDELYALTEADPKESDMKIKCIYEI 65

Query: 87  MVK--APTFVIRNDEDLNTFLTWNRVSDVPIYISTIPK 123
             +   P F I ND DLN +L     S+VP+YIS  P+
Sbjct: 66  KARNQTPPFEISNDRDLNFYLMGEDTSEVPLYISFEPR 103

[Close]
BLAST of Spg032331 vs. NCBI nr
Match: KAA0053438.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 7.4e-11
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           + VCYGG+W+E  ++Y+GG L+G  +  +  + D    LY L  ++  +FD+ IRC+ ++
Sbjct: 6   ILVCYGGVWDEGRRKYEGGVLKGIVVSKEITHKDLQDELYDLAEVDPTKFDIKIRCIYEI 65

Query: 87  MVK--APTFVIRNDEDLNTFLTWNRVSDVPIYISTIP 122
             K  AP F + ND DL  ++      +VP+Y+S  P
Sbjct: 66  NGKKEAPPFELSNDRDLKFYILSENPLEVPLYLSFEP 102

[Close]
BLAST of Spg032331 vs. NCBI nr
Match: KAA0058306.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 9.6e-11
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           + V YGG W+E  ++Y+GG L+G D+  +    D    LY L  ++  EFD+ IRC+ ++
Sbjct: 7   ILVHYGGAWDEGRRKYEGGVLKGIDVSKEITQKDLQDELYNLAKVDPTEFDIKIRCIYEI 66

Query: 87  MV--KAPTFVIRNDEDLNTFLTWNRVSDVPIYISTIPK 123
            V  + P F + ND DL  ++      +VP+Y+S  P+
Sbjct: 67  KVENEVPPFELSNDHDLKFYILSENPLEVPLYVSFEPR 104

[Close]
BLAST of Spg032331 vs. NCBI nr
Match: KAA0038984.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-10
Identity = 33/98 (33.67%), Postives = 57/98 (58.16%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           + VC+GG WNE  ++Y+GG L+G  +  +  + D    LY L  ++  +FD+ IRC+ ++
Sbjct: 6   ILVCHGGAWNEGQRKYEGGVLKGIVVSKEITHKDLQYELYDLAGVDPTKFDIKIRCIYEI 65

Query: 87  M--VKAPTFVIRNDEDLNTFLTWNRVSDVPIYISTIPK 123
               +AP F + ND DL  ++      +VP+Y+S  P+
Sbjct: 66  KGEKEAPPFELSNDRDLKFYILSENPLEVPLYLSFEPR 103

[Close]
BLAST of Spg032331 vs. ExPASy TrEMBL
Match: A0A6J1DPC2 (uncharacterized protein LOC111022579 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.5e-14
Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           ++V YGG+WN++  EY GG L+G  +  +  Y D L  LYALT  + +E D+ I+C+ ++
Sbjct: 6   IFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLDELYALTEADPKESDMKIKCIYEI 65

Query: 87  MVK--APTFVIRNDEDLNTFLTWNRVSDVPIYISTIPK 123
             +   P F I ND DLN +L     S+VP+YIS  P+
Sbjct: 66  KARNQTPPFEISNDRDLNFYLMGEDTSEVPLYISFEPR 103

[Close]
BLAST of Spg032331 vs. ExPASy TrEMBL
Match: A0A6J1DRN0 (uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.5e-14
Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           ++V YGG+WN++  EY GG L+G  +  +  Y D L  LYALT  + +E D+ I+C+ ++
Sbjct: 6   IFVRYGGVWNDKQTEYQGGLLKGIVVCKEITYQDLLDELYALTEADPKESDMKIKCIYEI 65

Query: 87  MVK--APTFVIRNDEDLNTFLTWNRVSDVPIYISTIPK 123
             +   P F I ND DLN +L     S+VP+YIS  P+
Sbjct: 66  KARNQTPPFEISNDRDLNFYLMGEDTSEVPLYISFEPR 103

[Close]
BLAST of Spg032331 vs. ExPASy TrEMBL
Match: A0A5A7UEF1 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G001090 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.6e-11
Identity = 34/97 (35.05%), Postives = 57/97 (58.76%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           + VCYGG+W+E  ++Y+GG L+G  +  +  + D    LY L  ++  +FD+ IRC+ ++
Sbjct: 6   ILVCYGGVWDEGRRKYEGGVLKGIVVSKEITHKDLQDELYDLAEVDPTKFDIKIRCIYEI 65

Query: 87  MVK--APTFVIRNDEDLNTFLTWNRVSDVPIYISTIP 122
             K  AP F + ND DL  ++      +VP+Y+S  P
Sbjct: 66  NGKKEAPPFELSNDRDLKFYILSENPLEVPLYLSFEP 102

[Close]
BLAST of Spg032331 vs. ExPASy TrEMBL
Match: A0A5A7UVW4 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006400 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.7e-11
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           + V YGG W+E  ++Y+GG L+G D+  +    D    LY L  ++  EFD+ IRC+ ++
Sbjct: 7   ILVHYGGAWDEGRRKYEGGVLKGIDVSKEITQKDLQDELYNLAKVDPTEFDIKIRCIYEI 66

Query: 87  MV--KAPTFVIRNDEDLNTFLTWNRVSDVPIYISTIPK 123
            V  + P F + ND DL  ++      +VP+Y+S  P+
Sbjct: 67  KVENEVPPFELSNDHDLKFYILSENPLEVPLYVSFEPR 104

[Close]
BLAST of Spg032331 vs. ExPASy TrEMBL
Match: A0A5A7T667 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00650 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 6.1e-11
Identity = 33/98 (33.67%), Postives = 57/98 (58.16%), Query Frame = 0 

Query: 27  VWVCYGGLWNERDKEYDGGELRGFDIDIDSAYSDFLSRLYALTSINSEEFDLTIRCVLQL 86
           + VC+GG WNE  ++Y+GG L+G  +  +  + D    LY L  ++  +FD+ IRC+ ++
Sbjct: 6   ILVCHGGAWNEGQRKYEGGVLKGIVVSKEITHKDLQYELYDLAGVDPTKFDIKIRCIYEI 65

Query: 87  M--VKAPTFVIRNDEDLNTFLTWNRVSDVPIYISTIPK 123
               +AP F + ND DL  ++      +VP+Y+S  P+
Sbjct: 66  KGEKEAPPFELSNDRDLKFYILSENPLEVPLYLSFEPR 103

The following BLAST results are available for this feature:
BLAST of Spg032331 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155431.19.3e-1440.82uncharacterized protein LOC111022579 isoform X1 [Momordica charantia][more]
XP_022155432.19.3e-1440.82uncharacterized protein LOC111022579 isoform X2 [Momordica charantia][more]
KAA0053438.17.4e-1135.05MuDRA-like transposase [Cucumis melo var. makuwa][more]
KAA0058306.19.6e-1134.69MuDRA-like transposase [Cucumis melo var. makuwa][more]
KAA0038984.11.3e-1033.67MuDRA-like transposase [Cucumis melo var. makuwa][more]
BLAST of Spg032331 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg032331 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DPC24.5e-1440.82uncharacterized protein LOC111022579 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1DRN04.5e-1440.82uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A5A7UEF13.6e-1135.05MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4... [more]
A0A5A7UVW44.7e-1134.69MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2... [more]
A0A5A7T6676.1e-1133.67MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8... [more]
BLAST of Spg032331 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg032331.1Spg032331.1mRNA