Spg032321 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032321
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold2: 34390637 .. 34392649 (+)
RNA-Seq Expression	Spg032321
Synteny	Spg032321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCATTCGTCACAAAAAGCAAAAGCAGAGTTACACACGGAAAGAGTCTCGTCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAAGAGGTCAAAGCCTATCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACATTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCTTGCTAGCTCCTCGGGAACGGTGGCAGGTCCATGAGACTTATCCTCCTTCAGCATAAAGGACTTACTGTCACTTCCTCAGGAAGCTAAAAGCGTCCTCATTAATGCATTGATAGAGTCTAATGGTACAAACATCCCAACCTTTGAGGCACGCACATATGCTTCGTGTTGAATGTCTATCGGATTTTCTGATGAAGATTTGTTGCTAGGGTCAAAGCCTCACAATAGACCTTTATTCGTCTCAGGATACATTCGAGAATAGAGGGTTAGTCGGATCCTCATCGATGATGGATCAGCTGTCAATATAATGCCTAAGTCAACCATGAAGCAGTTAGGCATCTTGATGGAGGAACTATCAAACAGTAAATTGGTGATCCAAGGTTTCAATCAGGGTGGACAGTGGGTGATTGGCATGATACGCCTTGAACTCATCATTGGAGACTTAAAAGATGATACTTTGTTCCATGTAATAGATTCTAAGACCACCTATAAGTTGTTGCTAGGTCGTCCTTGGATCCATGGTAATGGAGTCATAACCTCTACCTTGCACCAGTGCTTCAAATTCTATCAAGATGGCATCAAGAAAGTTGAAGCTGACACTAACCCATTTTCAGAAGCTGAATCTCATTTTGCTGATGCAATGTTTTATCTGAAGAATGAAAACACAGTGGAAACCGTGGCTACAGAAATCCCCTTGATAAAAAAGAATGATAAACTCGATTTAGAGCCACAAGCAGATGCAAAAAAGGAAGCTGTTGAAGATGTGAATACTACCGACCTGAAAAAGGGTGAAGCGTCTACAAGCCTTGTGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCTTTGTCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTTAGAAAGCATAAAGGTCGGTAACGTTGAAATTCTGAAGGAAAGTTTCACTACGCCTCTTACAAAGATCACAAGACAAAAGGTTAAGAAACCTGAGGATGATCAGATAAAAATGGTTTTGCCTGACAAACGGACTAAAGACGAGTTCGACCCCAAGGCATACAAACTTCTAGTGAAAGCAGGTTATGACTTCACAACTCACACTGAGTTTAAAAGTCTAAGGGTTTTTGATGAAAGATCTGAGCTCTCTGCAACACAGAAGAAGCTTCTAAAGGAAGGTTATAGTCTGCCAACAACGAGAAAAGGGCTTGGATATAAGTCGCCAGAACTGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTTTGTTTTTAGGCGCATCAGGCCACCAATTGCTCGTGCTTTAGTTTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCAAAGGTTAAGTATGCCCATTGGGGAAGAAGAGAGTACATTTTCAAATCCGGATGTCACTCAACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGGGAAGAAGAGAGTACATTTTTAACTCCGAATGTGACTCAACCATCAATTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTCTGCTTCATCATGA

mRNA sequence

ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCATTCGTCACAAAAAGCAAAAGCAGAGTTACACACGGAAAGAGTCTCGTCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAAGAGGTCAAAGCCTATCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACATTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCTTGCTAGCTCCTCGGGAACGGTGGCAGAGCCACAAGCAGATGCAAAAAAGGAAGCTGTTGAAGATGTGAATACTACCGACCTGAAAAAGGGTGAAGCGTCTACAAGCCTTGTGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCTTTGTCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTTAGAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGTTATAGTCTGCCAACAACGAGAAAAGGGCTTGGATATAAGTCGCCAGAACTGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTTTGTTTTTAGGCGCATCAGGCCACCAATTGCTCGTGCTTTAGTTTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCAAAGGTTAAGTATGCCCATTGGGGAAGAAGAGAGTACATTTTCAAATCCGGATGTCACTCAACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGGGAAGAAGAGAGTACATTTTTAACTCCGAATGTGACTCAACCATCAATTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTCTGCTTCATCATGA

Coding sequence (CDS)

ATGAAGGGATCCCAAGAAAAATATGTTTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCATTCGTCACAAAAAGCAAAAGCAGAGTTACACACGGAAAGAGTCTCGTCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAAGAGGTCAAAGCCTATCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACATTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACTGTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCTTGCTAGCTCCTCGGGAACGGTGGCAGAGCCACAAGCAGATGCAAAAAAGGAAGCTGTTGAAGATGTGAATACTACCGACCTGAAAAAGGGTGAAGCGTCTACAAGCCTTGTGAAACCTAAGGTTGTAAAGGATGAGAAATGTTCAAATTCACCTATCCTACGATACGTCCCTTTGTCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTTTAGAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGTTATAGTCTGCCAACAACGAGAAAAGGGCTTGGATATAAGTCGCCAGAACTGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTTTGTTTTTAGGCGCATCAGGCCACCAATTGCTCGTGCTTTAGTTTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCAAAGGTTAAGTATGCCCATTGGGGAAGAAGAGAGTACATTTTCAAATCCGGATGTCACTCAACCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGGGGAAGAAGAGAGTACATTTTTAACTCCGAATGTGACTCAACCATCAATTTTTCAAAGGTTAAGTGTTACCACGAGAAGAGACAAAAAAGAACAGTCTGCTTCATCATGA

Protein sequence

MKGSQEKYVSIEDENEGWTLVIRHKKQKQSYTRKESRLFRDNKRKAKSQKKKGKKKSKRSKPIVEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVLASSSGTVAEPQADAKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECLESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQPSIFQRLSVTTRRDKKEQSASS

Homology

[Close]

BLAST of Spg032321 vs. NCBI nr
Match: KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-40
Identity = 153/480 (31.87%), Postives = 204/480 (42.50%), Query Frame = 0


Query: 4   SQEKYVSIEDENEGWTLVIRHKKQKQSYTRKESRLFRDNKRKAKSQKKKGKKKSKRSKPI 63
           SQEK   IE+++EGWT+V R KK+K +  +KESRL+ + +R  K+QK K KKK+++ K +
Sbjct: 467 SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKKKTRKLKLV 526

Query: 64  VEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT-----------------CHIVDV 123
            E+ +DF    + +TLA++FP RFL D Q E    V                  C  +D 
Sbjct: 527 HEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTPYCMSIDF 586

Query: 124 VEDDDVLASS--------SGTVAEPQAD-------------------------------- 183
            ++D +L S         SG V E + +                                
Sbjct: 587 SDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILMEELSNSK 646

Query: 184 -----------------------------------------------AKKEAVEDVNTTD 243
                                                          A +E+ +   T  
Sbjct: 647 LVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTFH 706

Query: 244 LKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC--------------- 303
             K EASTS  K  +V DEK SN PILRYVPLSRRKKGESPF E                
Sbjct: 707 SGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKES 766

[Close]

BLAST of Spg032321 vs. NCBI nr
Match: KAA0055957.1 (uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-39
Identity = 108/252 (42.86%), Postives = 140/252 (55.56%), Query Frame = 0


Query: 127 AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 186
           A KE  + + T    K EAST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E   
Sbjct: 188 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 247

Query: 187 -----------------------------------------LESIKKKLLKEGYSLPTTR 246
                                                    L S +KKLL+EG+ +P +R
Sbjct: 248 GLKRRTKDGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSR 307

Query: 247 KGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALV 306
           KGLGYKSPE +RITR+GK KV D NHITV+EVD  +EKE  +QRT  F RI P +ARA V
Sbjct: 308 KGLGYKSPEPIRITRKGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPV 367

Query: 307 FQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGE 336
           F+RLS+ E + +  Q T++  R S FQRL++   EE+        T+PSAF+RL++   +
Sbjct: 368 FERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSITKKK 427

[Close]

BLAST of Spg032321 vs. NCBI nr
Match: TYK28162.1 (uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-38
Identity = 108/262 (41.22%), Postives = 141/262 (53.82%), Query Frame = 0


Query: 127 AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 186
           A KE  + + T    K EAST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E   
Sbjct: 152 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 211

Query: 187 ---------------------------------------------------LESIKKKLL 246
                                                              L S +KKLL
Sbjct: 212 GLKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLL 271

Query: 247 KEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRR 306
           +EG+ +P +RKGLGYKSPE +RITR+GK KV D+NHITV+EVD  +EKE  +QRT  F R
Sbjct: 272 REGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDR 331

Query: 307 IRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSA 336
           I P +ARA VF+RLS+ E E +  Q T++  + S FQRL++   EE+        T+PSA
Sbjct: 332 ISPHVARAPVFERLSMTEAERKDHQSTSNLDQRSAFQRLTITFKEEKGICQTSMTTKPSA 391

[Close]

BLAST of Spg032321 vs. NCBI nr
Match: KAA0043405.1 (hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 3.1e-38
Identity = 102/218 (46.79%), Postives = 134/218 (61.47%), Query Frame = 0


Query: 127 AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 186
           A KE  + + T   +KGEASTS  K  ++ DEK SN  ILRYVPLSRR+KGESPF +   
Sbjct: 56  ASKEPHKSIGTFHSRKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQ 115

Query: 187 -----------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVE 246
                      L  I+KKLL+EG+ +P +RKG GYKSPE + I R+ K KV D+NHITV 
Sbjct: 116 GLKVGDMKQPKLSLIQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVG 175

Query: 247 EVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLS 306
           EVD  +EKE   QR   F +IRP + R  VF+RLSV +TE +  Q T+S  + S  QRL+
Sbjct: 176 EVDSMEEKEGGSQRISAFDQIRPHVVRTTVFERLSVTKTERKCHQSTSSLNKRSALQRLT 235

Query: 307 MPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTP 332
           M   +E+ T      T+PSAF+RL++   ++  T   P
Sbjct: 236 MTFKKEKCTCQALRATRPSAFERLSVAKQKDAQTPRVP 273

[Close]

BLAST of Spg032321 vs. NCBI nr
Match: KAA0047672.1 (uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK08327.1 uncharacterized protein E5676_scaffold648G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-35
Identity = 105/241 (43.57%), Postives = 144/241 (59.75%), Query Frame = 0


Query: 127 AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECLE 186
           A ++  +   T    K EASTS  K  ++ +E  SN PILRYVPLSR KKGESPF E  +
Sbjct: 689 ASRKPHKSTETFHSGKNEASTSTAKSVILMNENTSNPPILRYVPLSRCKKGESPFVESPQ 748

Query: 187 SIKK---KLLKEGYSL---PTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKE 246
            +K    ++LKE +++     T+KGLGYKSPE +RITR+GK KV D+NHITV+EVD  + 
Sbjct: 749 GLKVGDIEVLKESFTIQLTKITKKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEG 808

Query: 247 KESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEE 306
           KE   QRT  F RI P +ARA VF+RLS+ E + +  Q T++  R S FQRL++   EE+
Sbjct: 809 KEGHSQRTSAFDRISPHVARAPVFERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEK 868

Query: 307 STFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ-----PSIFQRLSVTTRRDKKEQSA 357
                   T+PSAF+RL++   +   T   P +       P +    S+ T   KK++S 
Sbjct: 869 GICQASMTTKPSAFERLSITKKKNAQTPRAPIINHLEDGGPHVQTDSSIDT---KKKEST 926

[Close]

BLAST of Spg032321 vs. ExPASy TrEMBL
Match: A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.3e-41
Identity = 153/480 (31.87%), Postives = 204/480 (42.50%), Query Frame = 0


Query: 4   SQEKYVSIEDENEGWTLVIRHKKQKQSYTRKESRLFRDNKRKAKSQKKKGKKKSKRSKPI 63
           SQEK   IE+++EGWT+V R KK+K +  +KESRL+ + +R  K+QK K KKK+++ K +
Sbjct: 467 SQEKERLIEEDDEGWTVVTRRKKRKSTLIQKESRLYINYRRGNKTQKNKKKKKTRKLKLV 526

Query: 64  VEESEDFFCPPQPITLAEYFPRRFLDDSQGEALETVT-----------------CHIVDV 123
            E+ +DF    + +TLA++FP RFL D Q E    V                  C  +D 
Sbjct: 527 HEKDKDFPRTQRVVTLADFFPTRFLGDHQDENPGVVASASSSSAPIATYESTPYCMSIDF 586

Query: 124 VEDDDVLASS--------SGTVAEPQAD-------------------------------- 183
            ++D +L S         SG V E + +                                
Sbjct: 587 SDEDLLLGSKLHNRPLYVSGYVQEQRVERILVDNGSAVNIMPKSTMRQLGILMEELSNSK 646

Query: 184 -----------------------------------------------AKKEAVEDVNTTD 243
                                                          A +E+ +   T  
Sbjct: 647 LVIQGFNQGSQRVIDAKFYLKNDGSPEVVSVEVPLVNKEDNLQLKSLASRESHKSTGTFH 706

Query: 244 LKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC--------------- 303
             K EASTS  K  +V DEK SN PILRYVPLSRRKKGESPF E                
Sbjct: 707 SGKSEASTSTAKSVIVMDEKTSNPPILRYVPLSRRKKGESPFVEFPQGLKVGDIEVLKES 766

[Close]

BLAST of Spg032321 vs. ExPASy TrEMBL
Match: A0A5A7UMY2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00830 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-39
Identity = 108/252 (42.86%), Postives = 140/252 (55.56%), Query Frame = 0


Query: 127 AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 186
           A KE  + + T    K EAST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E   
Sbjct: 188 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 247

Query: 187 -----------------------------------------LESIKKKLLKEGYSLPTTR 246
                                                    L S +KKLL+EG+ +P +R
Sbjct: 248 GLKRRTKDGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSR 307

Query: 247 KGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRRIRPPIARALV 306
           KGLGYKSPE +RITR+GK KV D NHITV+EVD  +EKE  +QRT  F RI P +ARA V
Sbjct: 308 KGLGYKSPEPIRITRKGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPV 367

Query: 307 FQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSAFQRLNMPIGE 336
           F+RLS+ E + +  Q T++  R S FQRL++   EE+        T+PSAF+RL++   +
Sbjct: 368 FERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQTSMTTKPSAFERLSITKKK 427

[Close]

BLAST of Spg032321 vs. ExPASy TrEMBL
Match: A0A5D3DXC7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00760 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-38
Identity = 108/262 (41.22%), Postives = 141/262 (53.82%), Query Frame = 0


Query: 127 AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 186
           A KE  + + T    K EAST+  K  ++ DEK SN PILRYVPLSRRKKGESPF E   
Sbjct: 152 ASKEPHKSIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQ 211

Query: 187 ---------------------------------------------------LESIKKKLL 246
                                                              L S +KKLL
Sbjct: 212 GLKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTDFKSLKIHEQPKLSSTQKKLL 271

Query: 247 KEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKEKESVDQRTFVFRR 306
           +EG+ +P +RKGLGYKSPE +RITR+GK KV D+NHITV+EVD  +EKE  +QRT  F R
Sbjct: 272 REGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEKEGDNQRTSTFDR 331

Query: 307 IRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEESTFSNPDVTQPSA 336
           I P +ARA VF+RLS+ E E +  Q T++  + S FQRL++   EE+        T+PSA
Sbjct: 332 ISPHVARAPVFERLSMTEAERKDHQSTSNLDQRSAFQRLTITFKEEKGICQTSMTTKPSA 391

[Close]

BLAST of Spg032321 vs. ExPASy TrEMBL
Match: A0A5A7TPR5 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00040 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-38
Identity = 102/218 (46.79%), Postives = 134/218 (61.47%), Query Frame = 0


Query: 127 AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTEC-- 186
           A KE  + + T   +KGEASTS  K  ++ DEK SN  ILRYVPLSRR+KGESPF +   
Sbjct: 56  ASKEPHKSIGTFHSRKGEASTSTTKSMILMDEKTSNPLILRYVPLSRRQKGESPFVKFPQ 115

Query: 187 -----------LESIKKKLLKEGYSLPTTRKGLGYKSPELVRITRRGKAKVADTNHITVE 246
                      L  I+KKLL+EG+ +P +RKG GYKSPE + I R+ K KV D+NHITV 
Sbjct: 116 GLKVGDMKQPKLSLIQKKLLREGHVIPVSRKGPGYKSPEPIHIIRKRKKKVIDSNHITVG 175

Query: 247 EVDDSKEKESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLS 306
           EVD  +EKE   QR   F +IRP + R  VF+RLSV +TE +  Q T+S  + S  QRL+
Sbjct: 176 EVDSMEEKEGGSQRISAFDQIRPHVVRTTVFERLSVTKTERKCHQSTSSLNKRSALQRLT 235

Query: 307 MPIGEEESTFSNPDVTQPSAFQRLNMPIGEEESTFLTP 332
           M   +E+ T      T+PSAF+RL++   ++  T   P
Sbjct: 236 MTFKKEKCTCQALRATRPSAFERLSVAKQKDAQTPRVP 273

[Close]

BLAST of Spg032321 vs. ExPASy TrEMBL
Match: A0A5D3C8N8 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001250 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.0e-36
Identity = 105/241 (43.57%), Postives = 144/241 (59.75%), Query Frame = 0


Query: 127 AKKEAVEDVNTTDLKKGEASTSLVKPKVVKDEKCSNSPILRYVPLSRRKKGESPFTECLE 186
           A ++  +   T    K EASTS  K  ++ +E  SN PILRYVPLSR KKGESPF E  +
Sbjct: 689 ASRKPHKSTETFHSGKNEASTSTAKSVILMNENTSNPPILRYVPLSRCKKGESPFVESPQ 748

Query: 187 SIKK---KLLKEGYSL---PTTRKGLGYKSPELVRITRRGKAKVADTNHITVEEVDDSKE 246
            +K    ++LKE +++     T+KGLGYKSPE +RITR+GK KV D+NHITV+EVD  + 
Sbjct: 749 GLKVGDIEVLKESFTIQLTKITKKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEG 808

Query: 247 KESVDQRTFVFRRIRPPIARALVFQRLSVNETEEESTQPTNSSTRPSVFQRLSMPIGEEE 306
           KE   QRT  F RI P +ARA VF+RLS+ E + +  Q T++  R S FQRL++   EE+
Sbjct: 809 KEGHSQRTSAFDRISPHVARAPVFERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEK 868

Query: 307 STFSNPDVTQPSAFQRLNMPIGEEESTFLTPNVTQ-----PSIFQRLSVTTRRDKKEQSA 357
                   T+PSAF+RL++   +   T   P +       P +    S+ T   KK++S 
Sbjct: 869 GICQASMTTKPSAFERLSITKKKNAQTPRAPIINHLEDGGPHVQTDSSIDT---KKKEST 926

The following BLAST results are available for this feature:

BLAST of Spg032321 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061113.1	1.5e-40	31.88	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gyp...	[more]
KAA0055957.1	2.2e-39	42.86	uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]	[more]
TYK28162.1	2.4e-38	41.22	uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]	[more]
KAA0043405.1	3.1e-38	46.79	hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa]	[more]
KAA0047672.1	1.5e-35	43.57	uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of Spg032321 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg032321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BY54	7.3e-41	31.88	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UMY2	1.0e-39	42.86	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3DXC7	1.2e-38	41.22	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TPR5	1.5e-38	46.79	RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3C8N8	7.0e-36	43.57	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00125...	[more]

BLAST of Spg032321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..343

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032321.1	Spg032321.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process