Spg032054 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032054
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ferroxidase
Location	scaffold11: 44474098 .. 44476463 (+)
RNA-Seq Expression	Spg032054
Synteny	Spg032054

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGCTTCCCCCCTCCCTCTCTCTGCATCACGCTCCTCGCCGTCATACGTCTCTTCTTTGCGGCAGCACCGTCGAGCGTCGTCGGGCAGCAGCGCTGTCGCGTCATTTTCGCAGCAACACCGTCGCATCGTGCCGCCTCCCCAGCAACAGCGCCGTCGTGTTGCACCGCCTCCCATGACGCGGCACCGCAACAGATGGACAACAATCGCGTCCCTTCTCTCCTCTTCCCTATCTTTCTGATTTTCTTTTCTGGTTTGATATCTCTGCAAGTTTGAAGCCGGTGGTTGTAATTGTAACGATGGCTACCAAACTGCTTCAACTGCGTAAGCTTTCAAGGACACTGAAGCTGCCATCTTCTTCTTCTTCTTCTTCTGCTTCCTCTTTCAGGAAGCTTTCATATTTTCTAGAAGCTTCAAGACCTCTCCTCGATCTCTCCGATAATATCTATCAATTTCATCCTCCATCTTTTTCTCGAAGCTTCTGCTCCCGCCCTCTGGATTTCGTCGGCGATGATTCTCGAGGCCCTGCTACCATTGATTACAGGTAATTTGTTCCTCTTCTTTCTTTCATTTTCCGATTTTTTTTTAACCTTTCTTTAATATGAACCATGTATTTGAATCGAAATTTTGAAGAGAAGTTCCACCTCCGACCCTTCCCCCAATCGTTGCAATCTTCAAGTCTTTTCAATTTGGTAATTGTTTTTGGTCTACTTCTGATTTGAGACTTTTTGGTCCAATGTCTCCAATTGTTTTCTCTCGTCTGATTTCTAACCAAACTAGAAACGGGTTCGTGGTCATTCAACAAAGTGTTGTGGATGTCTACTTCCCTTGATTGAACAAATTACAATTGATATTCATGGGGTTTTCTTTGAGCGTCGATATAATAGTTGAATGCATTTGGTAGAGATGGGCTCAAGTGATCGTGGCTAATCTTTTCTGCAGTTCTCTGATGCAGGAGGGAGAGTTTCATAGGTTAGCTGATTCCACAATTCATGGACTACAAGAGAAATTAGAGGTACTTGTGTATAAATGAAGTGACAAACTTTTGCCCTTGATTTTATCTTATAAACTGAAGTTAAGTAACAGCTTATACTTTACATATGCATATTTCGGAATTGCTATTAAAGTTCGTGAACTTTATTTCATTGCTTGCTAGGAATATGGCGATGATCTCCAAATTGATGGCTTTGATGTGGACTATGGGGTGAGAATGACTAAGCAGTTCTAGAATTTGATAACTTCATTTCATATGAATAGACGATGCTTAATTTTGTCTGATTTTCATTACGTAGAATGAGGTACTGACCTTAAGGCTCGGCGATCTTGGCACTTACGTCTTGAACAAACAAACACCAAACAGACAAATTTGGCTTTCTTCCCCTGTGAGGTATGGATTATGCTTCACTAGTGACTCATTTTCCAGTTGAATGACTAGAATGTACAATGTTTATCCTTTTCCATTTCTTTCAAAGATCATTTCAGACCTTGTCCCTGTTTCCATTTTATGACAAAGTTCAGCTCACTCGTCTTTTCAATGTCTTTAGTGAAAAATGGAATTTGATCTGTTCATATAAAAAAAAGAAATCTTAGTGACAACCCAGGTTATTCTCTTCCTCGCAGTGGTCCGTCCAGGTTTGATTGGGATCAGAACTCACAGGCTTGGATTTATAGGAGGAACAAAGGAAACCTGTTGAGACTTTTAGAAACTGAACTGGCGCAGCTCTGTGGTGAGCCAATTCACCTTTCCTGAGCCTTTCAAACAACTTGAACATGATAAGGTTATTTTGAAGCACATATTTATGCAGCTCCTCCAATAATATGCTCTAATTTCTAGTGTTTTGAGTATAAACTATTTATGATTAACTTTGAGCATAGCTCAACCGACCAATCACCAAGATATATGTATATGCACATACATAATCTATGATAATATAGGTAACATTTATTGAAATTGTAAGATGTGGTGTGACCATTTTGTTTGTACATATTAGTTAGTTTTGGAGTCTAATCCAGGGGTTGAACACACGAAATGAAAAATTCACGACGAGGATTTCATCCGATTTGGAAGGAGGATTTACTTAGCTCTTTGATAAGGGTGAGAACTGGATCAAATTTGAACTTAAATTCCCAAAGCTTAGCGAACTCGACAAGTCGTTAGCCTAGACGAGCAGCAATGTCACAGCGTTAGAGCCGAGTGCCAGAGATCCAAACAAACAAATGCCAAACTTTGGAGCAATATTAGGTCTGATTGCTACATTGGTTAGCATTTCACACAGTCCATACTGTATAAAAAACTACAGTTAATTGTAATATCCCAATTCAAAATTCAGCATTTGCATGAATAACTGTACAAAAAGAGACTTGAGCC

mRNA sequence

ATGGCTACCAAACTGCTTCAACTGCGTAAGCTTTCAAGGACACTGAAGCTGCCATCTTCTTCTTCTTCTTCTTCTGCTTCCTCTTTCAGGAAGCTTTCATATTTTCTAGAAGCTTCAAGACCTCTCCTCGATCTCTCCGATAATATCTATCAATTTCATCCTCCATCTTTTTCTCGAAGCTTCTGCTCCCGCCCTCTGGATTTCGTCGGCGATGATTCTCGAGGCCCTGCTACCATTGATTACAGTTCTCTGATGCAGGAGGGAGAGTTTCATAGGTTAGCTGATTCCACAATTCATGGACTACAAGAGAAATTAGAGGAATATGGCGATGATCTCCAAATTGATGGCTTTGATGTGGACTATGGGAATGAGGTACTGACCTTAAGGCTCGGCGATCTTGGCACTTACGTCTTGAACAAACAAACACCAAACAGACAAATTTGGCTTTCTTCCCCTGTGAGTGGTCCGTCCAGGTTTGATTGGGATCAGAACTCACAGGCTTGGATTTATAGGAGGAACAAAGGAAACCTGTTGAGACTTTTAGAAACTGAACTGGCGCAGCTCTGTGGTGAGCCAATTCACCTTTCCTGA

Coding sequence (CDS)

ATGGCTACCAAACTGCTTCAACTGCGTAAGCTTTCAAGGACACTGAAGCTGCCATCTTCTTCTTCTTCTTCTTCTGCTTCCTCTTTCAGGAAGCTTTCATATTTTCTAGAAGCTTCAAGACCTCTCCTCGATCTCTCCGATAATATCTATCAATTTCATCCTCCATCTTTTTCTCGAAGCTTCTGCTCCCGCCCTCTGGATTTCGTCGGCGATGATTCTCGAGGCCCTGCTACCATTGATTACAGTTCTCTGATGCAGGAGGGAGAGTTTCATAGGTTAGCTGATTCCACAATTCATGGACTACAAGAGAAATTAGAGGAATATGGCGATGATCTCCAAATTGATGGCTTTGATGTGGACTATGGGAATGAGGTACTGACCTTAAGGCTCGGCGATCTTGGCACTTACGTCTTGAACAAACAAACACCAAACAGACAAATTTGGCTTTCTTCCCCTGTGAGTGGTCCGTCCAGGTTTGATTGGGATCAGAACTCACAGGCTTGGATTTATAGGAGGAACAAAGGAAACCTGTTGAGACTTTTAGAAACTGAACTGGCGCAGCTCTGTGGTGAGCCAATTCACCTTTCCTGA

Protein sequence

MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRSFCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRLLETELAQLCGEPIHLS

Homology

[Close]

BLAST of Spg032054 vs. NCBI nr
Match: XP_022971111.1 (frataxin, mitochondrial [Cucurbita maxima])

HSP 1 Score: 365.2 bits (936), Expect = 3.6e-97
Identity = 180/196 (91.84%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 1   MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRS 60
           MATKLL LRKLSR LK+PS  SSSS+SSFRK SY LE +RPLLDLSDN++QFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRL DSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRL 180
           YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQ+SQAWIYRRNK NLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 181 LETELAQLCGEPIHLS 197
           LETELAQLCGEPI+LS
Sbjct: 181 LETELAQLCGEPINLS 196

[Close]

BLAST of Spg032054 vs. NCBI nr
Match: KAG6604827.1 (Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 360.5 bits (924), Expect = 9.0e-96
Identity = 178/196 (90.82%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 1   MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRS 60
           MATKLL LRKLSR LK+PS  SSSS+SSFRK SY LE++RPLLDLSDN++QFHPPSFSRS
Sbjct: 29  MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 88

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 89  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 148

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQ+SQAWIYRR+K NLLRL
Sbjct: 149 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 208

Query: 181 LETELAQLCGEPIHLS 197
           LETEL QLCGEPI+LS
Sbjct: 209 LETELTQLCGEPINLS 224

[Close]

BLAST of Spg032054 vs. NCBI nr
Match: XP_022947402.1 (frataxin, mitochondrial [Cucurbita moschata])

HSP 1 Score: 360.5 bits (924), Expect = 9.0e-96
Identity = 178/196 (90.82%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 1   MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRS 60
           MATKLL LRKLSR LK+PS  SSSS+SSFRK SY LE++RPLLDLSDN++QFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQ+SQAWIYRR+K NLLRL
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 181 LETELAQLCGEPIHLS 197
           LETEL QLCGEPI+LS
Sbjct: 181 LETELTQLCGEPINLS 196

[Close]

BLAST of Spg032054 vs. NCBI nr
Match: XP_023533562.1 (frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 177/196 (90.31%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 1   MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRS 60
           MATKLL LRKLSR LK+PS  SSSS+SSFRK SY LE +RPLLDLSDN++QFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLM EGEFHRLADSTIHGLQEKLEE+GDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMHEGEFHRLADSTIHGLQEKLEEFGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRL 180
           YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSP SGPSRFDWDQ+SQAWIYRRNK NLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPASGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 181 LETELAQLCGEPIHLS 197
           LETELAQLCG+PI+LS
Sbjct: 181 LETELAQLCGKPINLS 196

[Close]

BLAST of Spg032054 vs. NCBI nr
Match: XP_023533560.1 (frataxin, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 177/203 (87.19%), Postives = 186/203 (91.63%), Query Frame = 0


Query: 1   MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRS 60
           MATKLL LRKLSR LK+PS  SSSS+SSFRK SY LE +RPLLDLSDN++QFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDY-------SSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQ 120
           FCSRPLDFVGDDSRGPATIDY       SSLM EGEFHRLADSTIHGLQEKLEE+GDDLQ
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSLEAFQISSLMHEGEFHRLADSTIHGLQEKLEEFGDDLQ 120

Query: 121 IDGFDVDYGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRN 180
           IDGFDVDYGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSP SGPSRFDWDQ+SQAWIYRRN
Sbjct: 121 IDGFDVDYGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPASGPSRFDWDQDSQAWIYRRN 180

Query: 181 KGNLLRLLETELAQLCGEPIHLS 197
           K NLLRLLETELAQLCG+PI+LS
Sbjct: 181 KANLLRLLETELAQLCGKPINLS 203

[Close]

BLAST of Spg032054 vs. ExPASy Swiss-Prot
Match: Q9ZR07 (Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50
Identity = 109/191 (57.07%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 8   LRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQ--FHPPSFSRSFCSRP 67
           LRKL R LKL  S +   ++  R  S  ++ S   LD    I     H    +RSF    
Sbjct: 9   LRKLPRFLKL--SPTLLRSNGVRVSSNLIQDSIEPLDSFWRIGSRIRHDSLTTRSF---- 68

Query: 68  LDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGNEV 127
                  S+GPA++DYSS++QE EFH+LA+ TI+ L EK+E+YGD++QIDGFD+DYGNEV
Sbjct: 69  ------SSQGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNEV 128

Query: 128 LTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRLLETEL 187
           LTL+LG LGTYVLNKQTPNRQIW+SSPVSGPSRFDWD+++ AWIYRR +  L +LLE EL
Sbjct: 129 LTLKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEEL 187

Query: 188 AQLCGEPIHLS 197
             LCGEPI LS
Sbjct: 189 ENLCGEPIQLS 187

[Close]

BLAST of Spg032054 vs. ExPASy Swiss-Prot
Match: O35943 (Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.1e-22
Identity = 55/125 (44.00%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 74  RGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 133
           R   T+D  S + E  + RLA+ T+  L E  E+  D    ++ +DV +G+ VLT++L G
Sbjct: 76  RNLGTLDNPSSLDETAYERLAEETLDSLAEFFEDLADKPYTLEDYDVSFGDGVLTIKLGG 135

Query: 134 DLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRLLETELAQLCGE 193
           DLGTYV+NKQTPN+QIWLSSP SGP R+DW    + W+Y  +  +L  LL  EL +    
Sbjct: 136 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLARELTKALNT 195

Query: 194 PIHLS 197
            + LS
Sbjct: 196 KLDLS 198

[Close]

BLAST of Spg032054 vs. ExPASy Swiss-Prot
Match: Q05B87 (Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.0e-21
Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 74  RGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 133
           R   T+  +  + +  + RLA+ T+  L E  E+  D     + +DV +G+ VLT++L G
Sbjct: 80  RTAGTLGDAGTLDDTTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGG 139

Query: 134 DLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRLLETELAQLCGE 193
           DLGTYV+NKQTPN+QIWLSSP SGP R+DW    + W+Y  +  +L  LL TEL Q    
Sbjct: 140 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGRNWVYSHDGVSLHELLATELTQALKT 199

Query: 194 PIHLS 197
            + LS
Sbjct: 200 KLDLS 202

[Close]

BLAST of Spg032054 vs. ExPASy Swiss-Prot
Match: O74831 (Frataxin homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1183.03c PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-21
Identity = 45/115 (39.13%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 79  IDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGNEVLTLRLGDLGTYVL 138
           + ++  + + E+HR+AD T+  L +  E+  +++    +D+ Y N V+TL LG+ GTYV+
Sbjct: 36  VRHNGALTDLEYHRVADDTLDVLNDTFEDLLEEVGKKDYDIQYANGVITLMLGEKGTYVI 95

Query: 139 NKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRLLETELAQLCGEPI 194
           NKQ P  QIWLSSPVSGP  +++   S+ W   R++G LL +L +E ++    PI
Sbjct: 96  NKQPPAHQIWLSSPVSGPKHYEYSLKSKTWCSTRDEGTLLGILSSEFSKWFSRPI 150

[Close]

BLAST of Spg032054 vs. ExPASy Swiss-Prot
Match: Q16595 (Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-21
Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 0


Query: 74  RGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 133
           R   T+ +   + E  + RLA+ T+  L E  E+  D     + +DV +G+ VLT++L G
Sbjct: 79  RKSGTLGHPGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGG 138

Query: 134 DLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRLLETELAQLCGE 193
           DLGTYV+NKQTPN+QIWLSSP SGP R+DW    + W+Y  +  +L  LL  EL +    
Sbjct: 139 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLAAELTKALKT 198

Query: 194 PIHLS 197
            + LS
Sbjct: 199 KLDLS 201

[Close]

BLAST of Spg032054 vs. ExPASy TrEMBL
Match: A0A6J1I2E7 (Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.8e-97
Identity = 180/196 (91.84%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 1   MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRS 60
           MATKLL LRKLSR LK+PS  SSSS+SSFRK SY LE +RPLLDLSDN++QFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRL DSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRL 180
           YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQ+SQAWIYRRNK NLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 181 LETELAQLCGEPIHLS 197
           LETELAQLCGEPI+LS
Sbjct: 181 LETELAQLCGEPINLS 196

[Close]

BLAST of Spg032054 vs. ExPASy TrEMBL
Match: A0A6J1G6C8 (Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.3e-96
Identity = 178/196 (90.82%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 1   MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRS 60
           MATKLL LRKLSR LK+PS  SSSS+SSFRK SY LE++RPLLDLSDN++QFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQ+SQAWIYRR+K NLLRL
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 181 LETELAQLCGEPIHLS 197
           LETEL QLCGEPI+LS
Sbjct: 181 LETELTQLCGEPINLS 196

[Close]

BLAST of Spg032054 vs. ExPASy TrEMBL
Match: A0A6J1CG34 (Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.0e-93
Identity = 175/196 (89.29%), Postives = 184/196 (93.88%), Query Frame = 0


Query: 1   MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRS 60
           MATKLL LRKLSR LK+PSSSS SS   FR+ SY LEASRPLL +SDN++QFHPPSFSRS
Sbjct: 1   MATKLLPLRKLSRILKVPSSSSYSS-PCFRRYSYLLEASRPLLGISDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDFV DDSRGPA+IDYSSLMQEG+FHRLADSTIHGLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVDDDSRGPASIDYSSLMQEGDFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRL 180
           YGNEVLTL+LGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNK NLLRL
Sbjct: 121 YGNEVLTLKLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 180

Query: 181 LETELAQLCGEPIHLS 197
           LETELA+LCGEPI LS
Sbjct: 181 LETELAELCGEPIGLS 195

[Close]

BLAST of Spg032054 vs. ExPASy TrEMBL
Match: A0A1S3BJ48 (Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-86
Identity = 165/196 (84.18%), Postives = 176/196 (89.80%), Query Frame = 0


Query: 1   MATKLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRS 60
           MATKLL L KLSR LKLPSSSS     SFRK  Y LEAS PL+ +S+N++QF PPSFS+S
Sbjct: 1   MATKLLPLHKLSRILKLPSSSS----CSFRKCPYLLEASIPLIHISNNVHQFQPPSFSQS 60

Query: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLD VGDDSRGPATIDYSSLMQEGEFHRLAD TI GLQEKLEEYGD+LQIDGFDVD
Sbjct: 61  FCSRPLDIVGDDSRGPATIDYSSLMQEGEFHRLADFTIQGLQEKLEEYGDNLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRL 180
           YGNEVLTLRLG+LGTYVLNKQTPNRQIWLSSP+SGPSRFDWDQNS+AWIYRRNK NLL L
Sbjct: 121 YGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSRAWIYRRNKANLLSL 180

Query: 181 LETELAQLCGEPIHLS 197
           LETEL QLCGEPI+LS
Sbjct: 181 LETELMQLCGEPINLS 192

[Close]

BLAST of Spg032054 vs. ExPASy TrEMBL
Match: A0A0A0KAC6 (Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.8e-84
Identity = 160/193 (82.90%), Postives = 169/193 (87.56%), Query Frame = 0


Query: 4   KLLQLRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQFHPPSFSRSFCS 63
           KLL LRKLSR LKLPS SS     SFRK  + LEAS PL+ + +N++QFHPPSF RSFCS
Sbjct: 35  KLLPLRKLSRILKLPSYSS----CSFRKFPHLLEASSPLIHIFNNVHQFHPPSFLRSFCS 94

Query: 64  RPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGN 123
           RPLD VGDDSRGPATIDYSSLMQEGEFHRLAD  I GLQEKLEEYGD+LQIDGFDVDYGN
Sbjct: 95  RPLDIVGDDSRGPATIDYSSLMQEGEFHRLADFAIQGLQEKLEEYGDNLQIDGFDVDYGN 154

Query: 124 EVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRLLET 183
           EVLTLRLG+LGTYVLNKQTPNRQIWLSSP+SGPSRFDWDQNSQ WIYRRNK NLL LLET
Sbjct: 155 EVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQTWIYRRNKANLLSLLET 214

Query: 184 ELAQLCGEPIHLS 197
           EL QLCGEPI LS
Sbjct: 215 ELTQLCGEPIDLS 223

[Close]

BLAST of Spg032054 vs. TAIR 10
Match: AT4G03240.1 (frataxin homolog )

HSP 1 Score: 199.1 bits (505), Expect = 3.2e-51
Identity = 109/191 (57.07%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 8   LRKLSRTLKLPSSSSSSSASSFRKLSYFLEASRPLLDLSDNIYQ--FHPPSFSRSFCSRP 67
           LRKL R LKL  S +   ++  R  S  ++ S   LD    I     H    +RSF    
Sbjct: 9   LRKLPRFLKL--SPTLLRSNGVRVSSNLIQDSIEPLDSFWRIGSRIRHDSLTTRSF---- 68

Query: 68  LDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDYGNEV 127
                  S+GPA++DYSS++QE EFH+LA+ TI+ L EK+E+YGD++QIDGFD+DYGNEV
Sbjct: 69  ------SSQGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNEV 128

Query: 128 LTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKGNLLRLLETEL 187
           LTL+LG LGTYVLNKQTPNRQIW+SSPVSGPSRFDWD+++ AWIYRR +  L +LLE EL
Sbjct: 129 LTLKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEEL 187

Query: 188 AQLCGEPIHLS 197
             LCGEPI LS
Sbjct: 189 ENLCGEPIQLS 187

The following BLAST results are available for this feature:

BLAST of Spg032054 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971111.1	3.6e-97	91.84	frataxin, mitochondrial [Cucurbita maxima]	[more]
KAG6604827.1	9.0e-96	90.82	Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022947402.1	9.0e-96	90.82	frataxin, mitochondrial [Cucurbita moschata]	[more]
XP_023533562.1	1.2e-95	90.31	frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023533560.1	1.4e-93	87.19	frataxin, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg032054 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR07	4.5e-50	57.07	Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2	[more]
O35943	3.1e-22	44.00	Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1	[more]
Q05B87	2.0e-21	43.20	Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1	[more]
O74831	2.6e-21	39.13	Frataxin homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
Q16595	5.8e-21	42.40	Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2	[more]

BLAST of Spg032054 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2E7	1.8e-97	91.84	Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1	[more]
A0A6J1G6C8	4.3e-96	90.82	Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1	[more]
A0A6J1CG34	2.0e-93	89.29	Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1	[more]
A0A1S3BJ48	1.1e-86	84.18	Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1	[more]
A0A0A0KAC6	3.8e-84	82.90	Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1	[more]

BLAST of Spg032054 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03240.1	3.2e-51	57.07	frataxin homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002908	Frataxin/CyaY	PRINTS	PR00904	FRATAXIN	coord: 138..153 score: 81.25 coord: 123..138 score: 43.75 coord: 85..103 score: 36.84
IPR002908	Frataxin/CyaY	SMART	SM01219	Frataxin_Cyay_2	coord: 85..196 e-value: 2.2E-49 score: 180.0
IPR002908	Frataxin/CyaY	TIGRFAM	TIGR03421	TIGR03421	coord: 87..194 e-value: 9.0E-24 score: 81.4
IPR002908	Frataxin/CyaY	PFAM	PF01491	Frataxin_Cyay	coord: 85..192 e-value: 4.7E-37 score: 126.4
IPR002908	Frataxin/CyaY	PANTHER	PTHR16821	FRATAXIN	coord: 14..195
IPR002908	Frataxin/CyaY	PROSITE	PS50810	FRATAXIN_2	coord: 85..193 score: 29.625292
IPR036524	Frataxin/CyaY superfamily	GENE3D	3.30.920.10	Frataxin/CyaY	coord: 77..196 e-value: 1.0E-41 score: 143.7
IPR036524	Frataxin/CyaY superfamily	SUPERFAMILY	55387	Frataxin/Nqo15-like	coord: 76..193
IPR017789	Frataxin	TIGRFAM	TIGR03422	TIGR03422	coord: 89..186 e-value: 2.3E-35 score: 118.8
None	No IPR available	PANTHER	PTHR16821:SF2	FRATAXIN, MITOCHONDRIAL	coord: 14..195
None	No IPR available	CDD	cd00503	Frataxin	coord: 85..195 e-value: 2.3232E-41 score: 133.545
IPR020895	Frataxin conserved site	PROSITE	PS01344	FRATAXIN_1	coord: 137..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032054.1	Spg032054.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006879	cellular iron ion homeostasis
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0006811	ion transport
biological_process	GO:0018283	iron incorporation into metallo-sulfur cluster
biological_process	GO:1903329	regulation of iron-sulfur cluster assembly
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0008199	ferric iron binding
molecular_function	GO:0008198	ferrous iron binding
molecular_function	GO:0004322	ferroxidase activity
molecular_function	GO:0034986	iron chaperone activity