Spg031967 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg031967
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Locationscaffold11: 37372859 .. 37373371 (-)
RNA-Seq ExpressionSpg031967
SyntenySpg031967
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTGCCATTTCTCTGAAATTTTTCATCTCTCTCACGGCGGTTCTCCTCCTTTTCCCGGCCGCATTTTCGTCCATTCCGGTCGCCCACCGCCGCACCTCCGCCGGCGCCAAGTACCAAATCGAATGCACAATGTGCTCTGCTTGCGACAATCCCTGCGGCCAGTATCTCTCTCCGCCGCCGCCTCCGCCATCCCCTCCTCCGCCCGTCAACTGCCCGCCGCCGCCTTCTCCGCCCAGCTCCGGTAACTACTACTACTACTCTCCTCCACCGCCTGCTCAACCCACCTACACATACTCCTCCCCGCCGCCGCCGCGTGGTATCATCGGCGGATTCTACCAGCCGCCGCCGTACAGTAATTACCCAGCACCGCCGCCGCCGAACCCGATTGTGCCGTATTTCCCGTTTTACTACCACACCCCACCGCCGGGCTCCTCCGCCGCCGCCGGCCGCCTCACGAGCTCTGTTCTTACCGTTGCTCTGTTTACCTTTTTACTTGCTTTGGTTTAA

mRNA sequence

ATGGAAACTGCCATTTCTCTGAAATTTTTCATCTCTCTCACGGCGGTTCTCCTCCTTTTCCCGGCCGCATTTTCGTCCATTCCGGTCGCCCACCGCCGCACCTCCGCCGGCGCCAAGTACCAAATCGAATGCACAATGTGCTCTGCTTGCGACAATCCCTGCGGCCAGTATCTCTCTCCGCCGCCGCCTCCGCCATCCCCTCCTCCGCCCGTCAACTGCCCGCCGCCGCCTTCTCCGCCCAGCTCCGGTAACTACTACTACTACTCTCCTCCACCGCCTGCTCAACCCACCTACACATACTCCTCCCCGCCGCCGCCGCGTGGTATCATCGGCGGATTCTACCAGCCGCCGCCGTACAGTAATTACCCAGCACCGCCGCCGCCGAACCCGATTGTGCCGTATTTCCCGTTTTACTACCACACCCCACCGCCGGGCTCCTCCGCCGCCGCCGGCCGCCTCACGAGCTCTGTTCTTACCGTTGCTCTGTTTACCTTTTTACTTGCTTTGGTTTAA

Coding sequence (CDS)

ATGGAAACTGCCATTTCTCTGAAATTTTTCATCTCTCTCACGGCGGTTCTCCTCCTTTTCCCGGCCGCATTTTCGTCCATTCCGGTCGCCCACCGCCGCACCTCCGCCGGCGCCAAGTACCAAATCGAATGCACAATGTGCTCTGCTTGCGACAATCCCTGCGGCCAGTATCTCTCTCCGCCGCCGCCTCCGCCATCCCCTCCTCCGCCCGTCAACTGCCCGCCGCCGCCTTCTCCGCCCAGCTCCGGTAACTACTACTACTACTCTCCTCCACCGCCTGCTCAACCCACCTACACATACTCCTCCCCGCCGCCGCCGCGTGGTATCATCGGCGGATTCTACCAGCCGCCGCCGTACAGTAATTACCCAGCACCGCCGCCGCCGAACCCGATTGTGCCGTATTTCCCGTTTTACTACCACACCCCACCGCCGGGCTCCTCCGCCGCCGCCGGCCGCCTCACGAGCTCTGTTCTTACCGTTGCTCTGTTTACCTTTTTACTTGCTTTGGTTTAA

Protein sequence

METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGIIGGFYQPPPYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTSSVLTVALFTFLLALV
Homology
BLAST of Spg031967 vs. NCBI nr
Match: XP_038906774.1 (leucine-rich repeat extensin-like protein 6 [Benincasa hispida])

HSP 1 Score: 276.6 bits (706), Expect = 1.5e-70
Identity = 150/174 (86.21%), Postives = 156/174 (89.66%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSP 60
           METAISL+FFISLTAVLLLFPA FSS+PVA RR SAGAKYQIECTMCSACDNPCGQYLSP
Sbjct: 1   METAISLRFFISLTAVLLLFPAGFSSLPVADRRISAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGII-GGFYQPPPY 120
           PP    PPPPVNCPPPPSPPSSG YYYYSPPPP QPTYTYSSPPPPRGI  GG+YQPPPY
Sbjct: 61  PP----PPPPVNCPPPPSPPSSGTYYYYSPPPPTQPTYTYSSPPPPRGINGGGYYQPPPY 120

Query: 121 SNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           +NYPAPPPPNPIVPYFPFYYHTPPPGSSAA G LT+    SVLTVALF+FLL L
Sbjct: 121 NNYPAPPPPNPIVPYFPFYYHTPPPGSSAAVGCLTNSLAYSVLTVALFSFLLTL 170

BLAST of Spg031967 vs. NCBI nr
Match: KGN57146.1 (hypothetical protein Csa_010613 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 6.2e-69
Identity = 146/175 (83.43%), Postives = 156/175 (89.14%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSP 60
           MET I L+F ISLTA+LLLFP+  SS+PV H R+SAGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGII--GGFYQPPP 120
           PPPPPSPPPPVNCPPPPSPPSSG Y YYSPPPPAQP+YTYSSPPPP GII  GG+YQPPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           YSNYPAPPPPNPIVPYFPF+YHTPPPGSSAA  RLT+    SVLTVALF+FLLAL
Sbjct: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLAL 175

BLAST of Spg031967 vs. NCBI nr
Match: XP_022955565.1 (leucine-rich repeat extensin-like protein 6 [Cucurbita moschata])

HSP 1 Score: 269.2 bits (687), Expect = 2.4e-68
Identity = 148/175 (84.57%), Postives = 154/175 (88.00%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSP 60
           METAISLKFFISLTAVLL FPA FSS+P A RRT AGAKYQIECTMCSACDNPCGQYLSP
Sbjct: 1   METAISLKFFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGIIG--GFYQPPP 120
           PPPPPSPPP +NCPPPPSPPSSG YYY  PPPP+QPTYTYSSPPPP G  G  G+YQPPP
Sbjct: 61  PPPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSPPPPPGNYGPSGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           YSNYPAPPPPNPIVPYFPFY+HTPPPG SAAAGRLT+    SVLTV LF FLLAL
Sbjct: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPG-SAAAGRLTNSWACSVLTVPLFLFLLAL 174

BLAST of Spg031967 vs. NCBI nr
Match: KAG6582188.1 (hypothetical protein SDJN03_22190, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.8 bits (678), Expect = 2.6e-67
Identity = 146/175 (83.43%), Postives = 153/175 (87.43%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSP 60
           METAISLKFF+SLTAVLL FPA FSS+  A RRT AGAKYQIECTMCSACDNPCGQYLSP
Sbjct: 1   METAISLKFFVSLTAVLLSFPAGFSSLQTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGIIG--GFYQPPP 120
           PPPPPSPPP +NCPPPPSPPSSG YYY  PPPP+QPTYTYSSPPPP G  G  G+YQPPP
Sbjct: 61  PPPPPSPPPAINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSPPPPPGNYGPSGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           YSNYPAPPPPNPIVPYFPFY+HTPPPG SAAAGRLT+    SVLTV LF FLLAL
Sbjct: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPG-SAAAGRLTNSWACSVLTVPLFLFLLAL 174

BLAST of Spg031967 vs. NCBI nr
Match: XP_022137790.1 (leucine-rich repeat extensin-like protein 3 [Momordica charantia])

HSP 1 Score: 263.8 bits (673), Expect = 9.9e-67
Identity = 143/176 (81.25%), Postives = 149/176 (84.66%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGA---KYQIECTMCSACDNPCGQY 60
           ME    L+F + L AVLL+FPA   S+P   RRTSAGA   KYQIECTMCSACDNPCGQY
Sbjct: 1   MENGAPLRFLLPLAAVLLIFPATLWSLPATDRRTSAGAVSSKYQIECTMCSACDNPCGQY 60

Query: 61  LSPPPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGIIGGFYQPP 120
           LSPPPPPPSPPPPVNCPPPPSPPSSG YYYYSPPPPAQPTYTYSSPPPPRGIIGG+YQPP
Sbjct: 61  LSPPPPPPSPPPPVNCPPPPSPPSSGTYYYYSPPPPAQPTYTYSSPPPPRGIIGGYYQPP 120

Query: 121 PYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           PYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAA  LT+    SV T  LFT LLAL
Sbjct: 121 PYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAA-HLTATSACSVFTATLFTLLLAL 175

BLAST of Spg031967 vs. ExPASy Swiss-Prot
Match: Q9LUI1 (Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=LRX6 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 48/107 (44.86%), Postives = 53/107 (49.53%), Query Frame = 0

Query: 38  AKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPT 97
           + Y I+C     C  P     SPPPPPP PPPP   PPPP PP         PPPP  P 
Sbjct: 363 SSYPIDCA-SFGCSPP-----SPPPPPPPPPPPPPPPPPPPPP---------PPPPPPPP 422

Query: 98  YTYSSPPPPRGIIGGFYQPPPYSNYPAPPPPNPIVPYFPFYYHTPPP 145
           Y Y SPPPP      +  PPP   Y  PPPP+P     P+ Y  PPP
Sbjct: 423 YVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSP-----PYVYPPPPP 449

BLAST of Spg031967 vs. ExPASy Swiss-Prot
Match: P06599 (Extensin OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 6.6e-05
Identity = 44/102 (43.14%), Postives = 54/102 (52.94%), Query Frame = 0

Query: 57  YLSPPPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQ------PTYTYSSPPPPRGII 116
           Y SPPPP  SPPPP + PPPP       Y+Y SPPPP        P Y Y SPPPP    
Sbjct: 36  YSSPPPPEHSPPPPEHSPPPP-------YHYESPPPPKHSPPPPTPVYKYKSPPPP---- 95

Query: 117 GGFYQPPPYSNYPAPPPP--NPIVPYFPFYYHTPPPGSSAAA 151
              + PPP  ++ +PPPP  +P  P   + Y +PPP   + A
Sbjct: 96  --MHSPPPPYHFESPPPPKHSPPPPTPVYKYKSPPPPKHSPA 124

BLAST of Spg031967 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 8.6e-05
Identity = 45/96 (46.88%), Postives = 49/96 (51.04%), Query Frame = 0

Query: 53  PCGQYLSPP----PPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRG 112
           P   + +PP    PPPPSPPPPV  PPPP PP    Y    PPPP  P   YS PPPP  
Sbjct: 413 PAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPP- 472

Query: 113 IIGGFYQPPPYSNYPAPPPPNPIVPYFPFYYHTPPP 145
                  PPP     +PPPP+P  P  P Y   PPP
Sbjct: 473 ------PPPPPPPVYSPPPPSPPPPPPPVYSPPPPP 501

BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A0A0LAN7 (Nutrient reservoir OS=Cucumis sativus OX=3659 GN=Csa_3G165630 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.0e-69
Identity = 146/175 (83.43%), Postives = 156/175 (89.14%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSP 60
           MET I L+F ISLTA+LLLFP+  SS+PV H R+SAGAKYQIECTMCSACDNPC QYLSP
Sbjct: 1   METPIPLQFLISLTALLLLFPSGISSLPVFHPRSSAGAKYQIECTMCSACDNPCAQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGII--GGFYQPPP 120
           PPPPPSPPPPVNCPPPPSPPSSG Y YYSPPPPAQP+YTYSSPPPP GII  GG+YQPPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPSSGTYDYYSPPPPAQPSYTYSSPPPPGGIIGPGGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           YSNYPAPPPPNPIVPYFPF+YHTPPPGSSAA  RLT+    SVLTVALF+FLLAL
Sbjct: 121 YSNYPAPPPPNPIVPYFPFFYHTPPPGSSAAVPRLTNSLPCSVLTVALFSFLLAL 175

BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A6J1GVF6 (leucine-rich repeat extensin-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111457543 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 148/175 (84.57%), Postives = 154/175 (88.00%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSP 60
           METAISLKFFISLTAVLL FPA FSS+P A RRT AGAKYQIECTMCSACDNPCGQYLSP
Sbjct: 1   METAISLKFFISLTAVLLSFPAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGIIG--GFYQPPP 120
           PPPPPSPPP +NCPPPPSPPSSG YYY  PPPP+QPTYTYSSPPPP G  G  G+YQPPP
Sbjct: 61  PPPPPSPPPSINCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSPPPPPGNYGPSGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           YSNYPAPPPPNPIVPYFPFY+HTPPPG SAAAGRLT+    SVLTV LF FLLAL
Sbjct: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPG-SAAAGRLTNSWACSVLTVPLFLFLLAL 174

BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A6J1IXZ9 (leucine-rich repeat extensin-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111479480 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.8e-67
Identity = 146/175 (83.43%), Postives = 153/175 (87.43%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSP 60
           METAISLKFFISLTAVLL F A FSS+P A RRT AGAKYQIECTMCSACDNPCGQYLSP
Sbjct: 1   METAISLKFFISLTAVLLSFTAGFSSLPTADRRTLAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGIIG--GFYQPPP 120
           PPPPPSPPP ++CPPPPSPPSSG YYY  PPPP+QPTYTYSSPPPP G  G  G+YQPPP
Sbjct: 61  PPPPPSPPPSIDCPPPPSPPSSGTYYYSPPPPPSQPTYTYSSPPPPPGNYGPSGYYQPPP 120

Query: 121 YSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           YSNYPAPPPPNPIVPYFPFY+HTPPPG SAAAGRLT+    SVLTV LF FLLAL
Sbjct: 121 YSNYPAPPPPNPIVPYFPFYFHTPPPG-SAAAGRLTNSWACSVLTVPLFFFLLAL 174

BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A6J1C7N8 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111009142 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.8e-67
Identity = 143/176 (81.25%), Postives = 149/176 (84.66%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGA---KYQIECTMCSACDNPCGQY 60
           ME    L+F + L AVLL+FPA   S+P   RRTSAGA   KYQIECTMCSACDNPCGQY
Sbjct: 1   MENGAPLRFLLPLAAVLLIFPATLWSLPATDRRTSAGAVSSKYQIECTMCSACDNPCGQY 60

Query: 61  LSPPPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGIIGGFYQPP 120
           LSPPPPPPSPPPPVNCPPPPSPPSSG YYYYSPPPPAQPTYTYSSPPPPRGIIGG+YQPP
Sbjct: 61  LSPPPPPPSPPPPVNCPPPPSPPSSGTYYYYSPPPPAQPTYTYSSPPPPRGIIGGYYQPP 120

Query: 121 PYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           PYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAA  LT+    SV T  LFT LLAL
Sbjct: 121 PYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAA-HLTATSACSVFTATLFTLLLAL 175

BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A5A7U5R9 (Nutrient reservoir OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G007810 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.4e-66
Identity = 144/176 (81.82%), Postives = 153/176 (86.93%), Query Frame = 0

Query: 1   METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSP 60
           ME  ISL+  ISLT +LLL     SS+PV H R+SAGAKYQIECTMCSACDNPCGQYLSP
Sbjct: 1   MEAPISLQILISLTPLLLLLLPRTSSLPVFHPRSSAGAKYQIECTMCSACDNPCGQYLSP 60

Query: 61  PPPPPSPPPPVNCPPPPSPPSSGNYYYYS-PPPPAQPTYTYSSPPPPRGII--GGFYQPP 120
           PPPPPSPPPPVNCPPPPSPP+SG Y YYS PPPPAQPTYTYSSPPPPRGII  GG+YQPP
Sbjct: 61  PPPPPSPPPPVNCPPPPSPPTSGTYDYYSPPPPPAQPTYTYSSPPPPRGIIGPGGYYQPP 120

Query: 121 PYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTS----SVLTVALFTFLLAL 170
           PY+NYPAPPPPNPIVPYFPFYYHTPPPGSSAA GRLT+    SVLTVALF+FLL L
Sbjct: 121 PYNNYPAPPPPNPIVPYFPFYYHTPPPGSSAAVGRLTNSLPCSVLTVALFSFLLVL 176

BLAST of Spg031967 vs. TAIR 10
Match: AT5G49280.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 79/134 (58.96%), Postives = 87/134 (64.93%), Query Frame = 0

Query: 42  IECTMCSACDNPCGQYLSPPPPPPSPPPP----VNCPPPPSPPSSGNYYYYSPPPPAQPT 101
           + CTMCS+CDNPC    S  PPPPSPPPP      CPPPPSPPSSG    Y  PPP+Q  
Sbjct: 31  VSCTMCSSCDNPCSPVQS-SPPPPSPPPPSTPTTACPPPPSPPSSGGGSSYYYPPPSQSG 90

Query: 102 YTYSSPPPPRGIIGGFYQPPPYS-NYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTSS 161
                PPP  G   G+Y PPPYS NYP PPPPNPIVPYFPFYYHTPPPGS +     + S
Sbjct: 91  GGSKYPPPYGGGGQGYYYPPPYSGNYPTPPPPNPIVPYFPFYYHTPPPGSGSDRFMSSYS 150

Query: 162 VLTVALFTFLLALV 171
           ++  ALF   L LV
Sbjct: 151 II-FALFAVFLCLV 162

BLAST of Spg031967 vs. TAIR 10
Match: AT4G16140.1 (proline-rich family protein )

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-23
Identity = 72/134 (53.73%), Postives = 83/134 (61.94%), Query Frame = 0

Query: 43  ECTMCSACDNPCGQYLSPPPPP--PSPPPP----VNCPPPPSPPSSGNYYYYSPPPPAQP 102
           +CTMC++CDNPC    SPPPPP  PSPPPP      CPPPPS    G YYYY   PPA  
Sbjct: 30  DCTMCTSCDNPCQPNPSPPPPPSNPSPPPPSPTTTACPPPPSSSGGGPYYYY---PPASQ 89

Query: 103 TYTYSSPPPPRGIIGGFYQPPPYS--NYPAPPPPNPIVPYFPFYYHTPPPGS----SAAA 162
           + +Y   PPP    GG+Y PPP S  NYP  PPPNPIVPYFPFYY+ PPP S    S A 
Sbjct: 90  SGSYR--PPPSSSSGGYYYPPPKSGGNYPYTPPPNPIVPYFPFYYYNPPPQSVMSGSDAK 149

Query: 163 GRLTSSVLTVALFT 165
            R +  V  + +F+
Sbjct: 150 IRFSYGVSFILIFS 158

BLAST of Spg031967 vs. TAIR 10
Match: AT3G06750.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-21
Identity = 71/129 (55.04%), Postives = 79/129 (61.24%), Query Frame = 0

Query: 42  IECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYS 101
           + CTMCS+CDNPC    +P P   SPP     PPPPS    G  YYYSPPPP+       
Sbjct: 30  VSCTMCSSCDNPC----NPVPSSYSPP-----PPPPSSSGGGGSYYYSPPPPSSSGGVKY 89

Query: 102 SPPPPRGIIGGFYQPPPYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTSSVLTVA 161
            PP      GG+Y PP Y NY  PPPPNPIVPYFPFYYHTPP G S +A RL +S+L  A
Sbjct: 90  PPPYGGDGYGGYYPPPYYGNYGTPPPPNPIVPYFPFYYHTPPQGYSGSA-RLQNSLL-FA 147

Query: 162 LFTFLLALV 171
           LF  LL  V
Sbjct: 150 LFAVLLCFV 147

BLAST of Spg031967 vs. TAIR 10
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 54.7 bits (130), Expect = 8.5e-08
Identity = 48/107 (44.86%), Postives = 53/107 (49.53%), Query Frame = 0

Query: 38  AKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPT 97
           + Y I+C     C  P     SPPPPPP PPPP   PPPP PP         PPPP  P 
Sbjct: 363 SSYPIDCA-SFGCSPP-----SPPPPPPPPPPPPPPPPPPPPP---------PPPPPPPP 422

Query: 98  YTYSSPPPPRGIIGGFYQPPPYSNYPAPPPPNPIVPYFPFYYHTPPP 145
           Y Y SPPPP      +  PPP   Y  PPPP+P     P+ Y  PPP
Sbjct: 423 YVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSP-----PYVYPPPPP 449

BLAST of Spg031967 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 48.5 bits (114), Expect = 6.1e-06
Identity = 45/96 (46.88%), Postives = 49/96 (51.04%), Query Frame = 0

Query: 53  PCGQYLSPP----PPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRG 112
           P   + +PP    PPPPSPPPPV  PPPP PP    Y    PPPP  P   YS PPPP  
Sbjct: 413 PAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPP- 472

Query: 113 IIGGFYQPPPYSNYPAPPPPNPIVPYFPFYYHTPPP 145
                  PPP     +PPPP+P  P  P Y   PPP
Sbjct: 473 ------PPPPPPPVYSPPPPSPPPPPPPVYSPPPPP 501

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906774.11.5e-7086.21leucine-rich repeat extensin-like protein 6 [Benincasa hispida][more]
KGN57146.16.2e-6983.43hypothetical protein Csa_010613 [Cucumis sativus][more]
XP_022955565.12.4e-6884.57leucine-rich repeat extensin-like protein 6 [Cucurbita moschata][more]
KAG6582188.12.6e-6783.43hypothetical protein SDJN03_22190, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022137790.19.9e-6781.25leucine-rich repeat extensin-like protein 3 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q9LUI11.2e-0644.86Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=L... [more]
P065996.6e-0543.14Extensin OS=Daucus carota OX=4039 PE=2 SV=1[more]
Q9T0K58.6e-0546.88Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L... [more]
Match NameE-valueIdentityDescription
A0A0A0LAN73.0e-6983.43Nutrient reservoir OS=Cucumis sativus OX=3659 GN=Csa_3G165630 PE=4 SV=1[more]
A0A6J1GVF61.1e-6884.57leucine-rich repeat extensin-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1IXZ94.8e-6783.43leucine-rich repeat extensin-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1C7N84.8e-6781.25leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A5A7U5R92.4e-6681.82Nutrient reservoir OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G0... [more]
Match NameE-valueIdentityDescription
AT5G49280.12.2e-2758.96hydroxyproline-rich glycoprotein family protein [more]
AT4G16140.15.5e-2353.73proline-rich family protein [more]
AT3G06750.13.0e-2155.04hydroxyproline-rich glycoprotein family protein [more]
AT3G22800.18.5e-0844.86Leucine-rich repeat (LRR) family protein [more]
AT4G13340.16.1e-0646.88Leucine-rich repeat (LRR) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 58..79
score: 45.45
coord: 89..105
score: 49.41
coord: 113..130
score: 41.11
NoneNo IPR availablePANTHERPTHR37702PROLINE-RICH FAMILY PROTEINcoord: 14..169
NoneNo IPR availablePANTHERPTHR37702:SF8RESERVOIR, PUTATIVE-RELATEDcoord: 14..169

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg031967.1Spg031967.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane