Spg031967 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACTGCCATTTCTCTGAAATTTTTCATCTCTCTCACGGCGGTTCTCCTCCTTTTCCCGGCCGCATTTTCGTCCATTCCGGTCGCCCACCGCCGCACCTCCGCCGGCGCCAAGTACCAAATCGAATGCACAATGTGCTCTGCTTGCGACAATCCCTGCGGCCAGTATCTCTCTCCGCCGCCGCCTCCGCCATCCCCTCCTCCGCCCGTCAACTGCCCGCCGCCGCCTTCTCCGCCCAGCTCCGGTAACTACTACTACTACTCTCCTCCACCGCCTGCTCAACCCACCTACACATACTCCTCCCCGCCGCCGCCGCGTGGTATCATCGGCGGATTCTACCAGCCGCCGCCGTACAGTAATTACCCAGCACCGCCGCCGCCGAACCCGATTGTGCCGTATTTCCCGTTTTACTACCACACCCCACCGCCGGGCTCCTCCGCCGCCGCCGGCCGCCTCACGAGCTCTGTTCTTACCGTTGCTCTGTTTACCTTTTTACTTGCTTTGGTTTAA ATGGAAACTGCCATTTCTCTGAAATTTTTCATCTCTCTCACGGCGGTTCTCCTCCTTTTCCCGGCCGCATTTTCGTCCATTCCGGTCGCCCACCGCCGCACCTCCGCCGGCGCCAAGTACCAAATCGAATGCACAATGTGCTCTGCTTGCGACAATCCCTGCGGCCAGTATCTCTCTCCGCCGCCGCCTCCGCCATCCCCTCCTCCGCCCGTCAACTGCCCGCCGCCGCCTTCTCCGCCCAGCTCCGGTAACTACTACTACTACTCTCCTCCACCGCCTGCTCAACCCACCTACACATACTCCTCCCCGCCGCCGCCGCGTGGTATCATCGGCGGATTCTACCAGCCGCCGCCGTACAGTAATTACCCAGCACCGCCGCCGCCGAACCCGATTGTGCCGTATTTCCCGTTTTACTACCACACCCCACCGCCGGGCTCCTCCGCCGCCGCCGGCCGCCTCACGAGCTCTGTTCTTACCGTTGCTCTGTTTACCTTTTTACTTGCTTTGGTTTAA ATGGAAACTGCCATTTCTCTGAAATTTTTCATCTCTCTCACGGCGGTTCTCCTCCTTTTCCCGGCCGCATTTTCGTCCATTCCGGTCGCCCACCGCCGCACCTCCGCCGGCGCCAAGTACCAAATCGAATGCACAATGTGCTCTGCTTGCGACAATCCCTGCGGCCAGTATCTCTCTCCGCCGCCGCCTCCGCCATCCCCTCCTCCGCCCGTCAACTGCCCGCCGCCGCCTTCTCCGCCCAGCTCCGGTAACTACTACTACTACTCTCCTCCACCGCCTGCTCAACCCACCTACACATACTCCTCCCCGCCGCCGCCGCGTGGTATCATCGGCGGATTCTACCAGCCGCCGCCGTACAGTAATTACCCAGCACCGCCGCCGCCGAACCCGATTGTGCCGTATTTCCCGTTTTACTACCACACCCCACCGCCGGGCTCCTCCGCCGCCGCCGGCCGCCTCACGAGCTCTGTTCTTACCGTTGCTCTGTTTACCTTTTTACTTGCTTTGGTTTAA METAISLKFFISLTAVLLLFPAAFSSIPVAHRRTSAGAKYQIECTMCSACDNPCGQYLSPPPPPPSPPPPVNCPPPPSPPSSGNYYYYSPPPPAQPTYTYSSPPPPRGIIGGFYQPPPYSNYPAPPPPNPIVPYFPFYYHTPPPGSSAAAGRLTSSVLTVALFTFLLALV Homology
BLAST of Spg031967 vs. NCBI nr
Match: XP_038906774.1 (leucine-rich repeat extensin-like protein 6 [Benincasa hispida]) HSP 1 Score: 276.6 bits (706), Expect = 1.5e-70 Identity = 150/174 (86.21%), Postives = 156/174 (89.66%), Query Frame = 0
BLAST of Spg031967 vs. NCBI nr
Match: KGN57146.1 (hypothetical protein Csa_010613 [Cucumis sativus]) HSP 1 Score: 271.2 bits (692), Expect = 6.2e-69 Identity = 146/175 (83.43%), Postives = 156/175 (89.14%), Query Frame = 0
BLAST of Spg031967 vs. NCBI nr
Match: XP_022955565.1 (leucine-rich repeat extensin-like protein 6 [Cucurbita moschata]) HSP 1 Score: 269.2 bits (687), Expect = 2.4e-68 Identity = 148/175 (84.57%), Postives = 154/175 (88.00%), Query Frame = 0
BLAST of Spg031967 vs. NCBI nr
Match: KAG6582188.1 (hypothetical protein SDJN03_22190, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 265.8 bits (678), Expect = 2.6e-67 Identity = 146/175 (83.43%), Postives = 153/175 (87.43%), Query Frame = 0
BLAST of Spg031967 vs. NCBI nr
Match: XP_022137790.1 (leucine-rich repeat extensin-like protein 3 [Momordica charantia]) HSP 1 Score: 263.8 bits (673), Expect = 9.9e-67 Identity = 143/176 (81.25%), Postives = 149/176 (84.66%), Query Frame = 0
BLAST of Spg031967 vs. ExPASy Swiss-Prot
Match: Q9LUI1 (Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=LRX6 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06 Identity = 48/107 (44.86%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of Spg031967 vs. ExPASy Swiss-Prot
Match: P06599 (Extensin OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 6.6e-05 Identity = 44/102 (43.14%), Postives = 54/102 (52.94%), Query Frame = 0
BLAST of Spg031967 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 8.6e-05 Identity = 45/96 (46.88%), Postives = 49/96 (51.04%), Query Frame = 0
BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A0A0LAN7 (Nutrient reservoir OS=Cucumis sativus OX=3659 GN=Csa_3G165630 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 3.0e-69 Identity = 146/175 (83.43%), Postives = 156/175 (89.14%), Query Frame = 0
BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A6J1GVF6 (leucine-rich repeat extensin-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111457543 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68 Identity = 148/175 (84.57%), Postives = 154/175 (88.00%), Query Frame = 0
BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A6J1IXZ9 (leucine-rich repeat extensin-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111479480 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.8e-67 Identity = 146/175 (83.43%), Postives = 153/175 (87.43%), Query Frame = 0
BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A6J1C7N8 (leucine-rich repeat extensin-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111009142 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.8e-67 Identity = 143/176 (81.25%), Postives = 149/176 (84.66%), Query Frame = 0
BLAST of Spg031967 vs. ExPASy TrEMBL
Match: A0A5A7U5R9 (Nutrient reservoir OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G007810 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 2.4e-66 Identity = 144/176 (81.82%), Postives = 153/176 (86.93%), Query Frame = 0
BLAST of Spg031967 vs. TAIR 10
Match: AT5G49280.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27 Identity = 79/134 (58.96%), Postives = 87/134 (64.93%), Query Frame = 0
BLAST of Spg031967 vs. TAIR 10
Match: AT4G16140.1 (proline-rich family protein ) HSP 1 Score: 105.1 bits (261), Expect = 5.5e-23 Identity = 72/134 (53.73%), Postives = 83/134 (61.94%), Query Frame = 0
BLAST of Spg031967 vs. TAIR 10
Match: AT3G06750.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 99.4 bits (246), Expect = 3.0e-21 Identity = 71/129 (55.04%), Postives = 79/129 (61.24%), Query Frame = 0
BLAST of Spg031967 vs. TAIR 10
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 54.7 bits (130), Expect = 8.5e-08 Identity = 48/107 (44.86%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of Spg031967 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 48.5 bits (114), Expect = 6.1e-06 Identity = 45/96 (46.88%), Postives = 49/96 (51.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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