Homology
BLAST of Spg031939 vs. NCBI nr
Match:
XP_022147491.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momordica charantia] >XP_022147492.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momordica charantia])
HSP 1 Score: 1021.5 bits (2640), Expect = 2.9e-294
Identity = 510/602 (84.72%), Postives = 547/602 (90.86%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAIST-KTQTYYEDPVGFYAQRENVIAWTSKIT 60
MLCFSRCARNLFVKSPQRK Y I ++A S+ K Q YYEDPVGFYAQRE+VI+WTSKIT
Sbjct: 1 MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKIT 60
Query: 61 NLVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFES 120
NLVRTGQ ++AFG FKTMFANGHRPNHVT+LSV+RAIDA SWES E +HGGVIKMGFES
Sbjct: 61 NLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFES 120
Query: 121 EVAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQY 180
EVAVSTALLG YS DIG VWKLFYQIP KD+VLWSAMISACVKNGQ+IEA DL REMQY
Sbjct: 121 EVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQY 180
Query: 181 EGVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240
+GVQPNHVSIVS+LPACADSG + LGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA
Sbjct: 181 QGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240
Query: 241 SIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLL 300
SIRVLKMMRKKDMVSWRT+T+ACIQNN PSKAFKIFSRM+ GFELG+TMML IIAAVLL
Sbjct: 241 SIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAVLL 300
Query: 301 VEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAM 360
VEELLLGLAVHCYALK GFLCFI+VGTE+LQMYAKFG LGLAKLIFD+LVDKDIIAWSAM
Sbjct: 301 VEELLLGLAVHCYALKGGFLCFIAVGTEILQMYAKFGHLGLAKLIFDELVDKDIIAWSAM 360
Query: 361 ISAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGY 420
ISAYSHGEDPLNAIQTFKMMQSTNEK NEIT VS++NACSSLGAQELG SI AHI KSG
Sbjct: 361 ISAYSHGEDPLNAIQTFKMMQSTNEKPNEITFVSLVNACSSLGAQELGESIHAHIMKSGC 420
Query: 421 SSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSD 480
SSNTHLMSA VD YCTLGRIK GKHVFDEISTKDLICW MIKGYGMNG GNEAL+TFSD
Sbjct: 421 SSNTHLMSAFVDLYCTLGRIKQGKHVFDEISTKDLICWSTMIKGYGMNGCGNEALDTFSD 480
Query: 481 MLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKG 540
MLS GLKPNGVLF+SLLSACAQCG+EKEGW+WF SM+DKYN+TPTVAHYACMVDLL R+G
Sbjct: 481 MLSCGLKPNGVLFVSLLSACAQCGIEKEGWVWFRSMIDKYNITPTVAHYACMVDLLVRQG 540
Query: 541 KTREAVEFVKKILVESDTRIWGALFSGCKST----DIADSIVEQLTALKQNNSDFYAMLL 598
K REAVEFVKK+ VE DTRIWGALF+GCK T DI DSIVEQLTA++ NNS+FYAMLL
Sbjct: 541 KIREAVEFVKKMPVEPDTRIWGALFTGCKLTHGFPDIVDSIVEQLTAMEPNNSNFYAMLL 600
BLAST of Spg031939 vs. NCBI nr
Match:
XP_023538701.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023538702.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023538703.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023538704.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1017.7 bits (2630), Expect = 4.1e-293
Identity = 506/601 (84.19%), Postives = 546/601 (90.85%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAISTKTQTYYEDPVGFYAQRENVIAWTSKITN 60
MLCFSRCAR LFVKSPQRK YTI IDA S K Q YYEDPVGF+AQ+E+VI+WTSKITN
Sbjct: 1 MLCFSRCARYLFVKSPQRKNYTIGLVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFESE 120
LVRTGQPDSAFG FK MFANGHRPN+VT+LSV+RAIDA SWESTIE MHGGVIKMGFESE
Sbjct: 61 LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
Query: 121 VAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQYE 180
VAVSTALLG YSM DIGIVWKLFYQIP KDVVLWSA+ISACVK+GQ+IEAF L REMQY+
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFIEAFHLFREMQYQ 180
Query: 181 GVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEAS 240
GV PNHVSIVSILPACAD GAL LGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
Query: 241 IRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLLV 300
IRVLK MRKKDMVSWRT+THACIQNN PSKAFKIF+RM+ GFELGETMMLD IAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
Query: 301 EELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAMI 360
+ELLLGLAVHC+ALK GFLCFISVGTELLQMYAKFG+LGLAKL FD+LVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCHALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGYS 420
SAYSHGE+PL+AIQTFKMMQSTNE+ N IT VS++NACSSL AQELG SI AHITKSGYS
Sbjct: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
Query: 421 SNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSDM 480
SNT LMSALVDFYC L R+KLG+HVFDEI TKDL+CW MIKGYG NG GNEALNTFSDM
Sbjct: 421 SNTCLMSALVDFYCILRRVKLGEHVFDEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
Query: 481 LSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKGK 540
LSYGLKPNG LF+SLLSACAQCGLEKEGWMWF++M+D+YN+TPTVAHYACMV+LLAR+GK
Sbjct: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFNAMIDEYNITPTVAHYACMVELLARQGK 540
Query: 541 TREAVEFVKKILVESDTRIWGALFSGCKST----DIADSIVEQLTALKQNNSDFYAMLLN 598
REAVEFVKK+ VE DTRIWGALF+GCK T DIADSIV+QL AL+ NNSDF+AML N
Sbjct: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
BLAST of Spg031939 vs. NCBI nr
Match:
XP_022974593.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima] >XP_022974594.1 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1017.3 bits (2629), Expect = 5.4e-293
Identity = 505/601 (84.03%), Postives = 545/601 (90.68%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAISTKTQTYYEDPVGFYAQRENVIAWTSKITN 60
MLCFSRCARNLFVK+PQRK YTI IDA S K Q YYEDPVGF+AQ+E+VI+WTSKITN
Sbjct: 1 MLCFSRCARNLFVKNPQRKNYTIGPVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFESE 120
LVRTGQPDSAFG FK MFANGHRPNHVT+LSV+RAIDA SWESTIE MHGGVIKMGFESE
Sbjct: 61 LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
Query: 121 VAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQYE 180
VAVSTALLG YSM DIGIVWKLFYQIP KDVVLWSA+ISACVKNGQ+IEAF L REMQY+
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKNGQFIEAFHLFREMQYQ 180
Query: 181 GVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEAS 240
GV PNHVSIVSILPACAD GAL LGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
Query: 241 IRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLLV 300
IRVLK MRKKDMVSWRT+THACIQNN PSKAFKIF+RM+ GFELGETMMLD IAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
Query: 301 EELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAMI 360
+EL+LGLAVHCYALK GFLCFISVGTELLQMYAKFG+LGLAKL FD+LVDKDIIAWSAMI
Sbjct: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGYS 420
SAYSHGE+PL+ IQTFKMMQSTNE+ N IT VS++NACSSL AQELG SI AHITKSGYS
Sbjct: 361 SAYSHGEEPLSVIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
Query: 421 SNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSDM 480
SNT LMSALVDFYC L R+KLG+HVFDEI TKDL+CW MIKGYGMNG+GNEALNTFSDM
Sbjct: 421 SNTRLMSALVDFYCILRRVKLGEHVFDEILTKDLVCWSTMIKGYGMNGYGNEALNTFSDM 480
Query: 481 LSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKGK 540
LSYGLK NG LF+SLLSACAQCGLEKEGWMWF+SM+D+YN+TPTVAHYACMV+LLAR+GK
Sbjct: 481 LSYGLKLNGTLFVSLLSACAQCGLEKEGWMWFNSMIDEYNITPTVAHYACMVELLARQGK 540
Query: 541 TREAVEFVKKILVESDTRIWGALFSGCK----STDIADSIVEQLTALKQNNSDFYAMLLN 598
REAVEFV K+ VE DTRI GALF+GCK +DIADSIV+QL AL+ NNSDF+AML N
Sbjct: 541 IREAVEFVNKMAVEPDTRICGALFAGCKLNHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
BLAST of Spg031939 vs. NCBI nr
Match:
KAG7028589.1 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1013.4 bits (2619), Expect = 7.8e-292
Identity = 502/601 (83.53%), Postives = 544/601 (90.52%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAISTKTQTYYEDPVGFYAQRENVIAWTSKITN 60
MLCFSRCARNLFVKSPQRK YTI ID S K Q YYEDPVGF+A++E+VI+WTSKITN
Sbjct: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFESE 120
LVRTGQPDSAFG FK MFANGHRPNHVT+LSV+RAIDA SWESTIE MHGGVIKMGFESE
Sbjct: 61 LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
Query: 121 VAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQYE 180
VAVSTALLG YSM DIGIVWKLFYQIP KDVVLWSA+ISACVK+GQ+ EAF L REMQY+
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQFSEAFHLFREMQYQ 180
Query: 181 GVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEAS 240
GV PNHVSIVSILPACAD GAL LGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
Query: 241 IRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLLV 300
IRVLK MRKKDMVSWRT+THACIQNN PSKAFKIF+RM+ GFELGETMMLD IAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
Query: 301 EELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAMI 360
+EL+LGLAVHCYALK GFLCFISVGTELLQMYAKFG+LGLAKL FD+LVDKDIIAWSAMI
Sbjct: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGYS 420
SAYSHGE+PL+AIQ+FK+MQSTNE+ N IT VS++NACSSL AQELG SI AHITKSGYS
Sbjct: 361 SAYSHGEEPLSAIQSFKVMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
Query: 421 SNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSDM 480
SNT LMSAL+DFYC L R+KLG+HVF EI TKDL+CW MIKGYG NG GNEALNTFSDM
Sbjct: 421 SNTRLMSALLDFYCILRRVKLGEHVFYEIVTKDLVCWSTMIKGYGTNGCGNEALNTFSDM 480
Query: 481 LSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKGK 540
LSYGLKPNG LF+SLLSACAQCGLEKEGWMWF+SM+D+YN+TPTVAHYACMV+LLAR+GK
Sbjct: 481 LSYGLKPNGTLFVSLLSACAQCGLEKEGWMWFYSMIDEYNITPTVAHYACMVELLARQGK 540
Query: 541 TREAVEFVKKILVESDTRIWGALFSGCKST----DIADSIVEQLTALKQNNSDFYAMLLN 598
REAVEFVKK+ VE DTRIWGALF+GCK T DIADSIV+QL AL+ NNSDF+AML N
Sbjct: 541 IREAVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
BLAST of Spg031939 vs. NCBI nr
Match:
XP_022934182.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 978.8 bits (2529), Expect = 2.1e-281
Identity = 488/588 (82.99%), Postives = 528/588 (89.80%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAISTKTQTYYEDPVGFYAQRENVIAWTSKITN 60
MLCFSRCARNLFVKSPQRK YTI ID S K Q YYEDPVGF+A++E+VI+WTSKITN
Sbjct: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFESE 120
LVRTGQPDSAFG FK MFANGHRPN+VT+LSV+RAIDA SWESTIE MHGGVIKMGFESE
Sbjct: 61 LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
Query: 121 VAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQYE 180
VAVSTALLG YSM DIGIVWKLFYQIP KDVVLWSA+ISACVK+GQ EAF L REMQY+
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQCSEAFHLFREMQYQ 180
Query: 181 GVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEAS 240
GV+PNHVSIVSILPACAD GAL LGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVRPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
Query: 241 IRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLLV 300
IRVLK MRKKDMVSWRT+THACIQNN PSKAFKIF+RM+ GFELGETMMLD IAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
Query: 301 EELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAMI 360
+EL+LGLAVHCYALK GFLCFISVGTELLQMYAKFG+LGLAKL FD+LVDKDIIAWSAMI
Sbjct: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGYS 420
SAYSHGE+PL+AIQTFKMMQSTNE+ N IT S++NACSSL AQELG SI AHITKSGYS
Sbjct: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFGSLVNACSSLDAQELGESIHAHITKSGYS 420
Query: 421 SNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSDM 480
SNT LMSALVDFYC L R+KLG+HVF EI TKDL+CW MIKGYGMNG+G EALNTFSDM
Sbjct: 421 SNTRLMSALVDFYCILRRVKLGEHVFYEILTKDLVCWSTMIKGYGMNGYGKEALNTFSDM 480
Query: 481 LSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKGK 540
LSYGLKPNG LF+SLLSACAQCGLEK GWMWF+SM+D+YN+TPTVAHYACMV+LLAR+GK
Sbjct: 481 LSYGLKPNGTLFVSLLSACAQCGLEKAGWMWFNSMIDEYNITPTVAHYACMVELLARQGK 540
Query: 541 TREAVEFVKKILVESDTRIWGALFSGCKST----DIADSIVEQLTALK 585
VEFVKK+ VE DTRIWGALF+GCK T DIADSIV+QL A +
Sbjct: 541 ---IVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNAFR 585
BLAST of Spg031939 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 307.8 bits (787), Expect = 2.8e-82
Identity = 173/556 (31.12%), Postives = 299/556 (53.78%), Query Frame = 0
Query: 49 ENVIAWTSKITNLVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAM 108
E + W + L ++G + GLFK M ++G + T V ++ + E +
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 217
Query: 109 HGGVIKMGFESEVAVSTALLGVY-SMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQY 168
HG ++K GF +V +L+ Y + K+F ++ +DV+ W+++I+ V NG
Sbjct: 218 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 169 IEAFDLIREMQYEGVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSL 228
+ + +M G++ + +IVS+ CADS + LG+ +H ++ F N+L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 229 MDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFE--- 288
+DMYSKC +L+++ V + M + +VS+ ++ + +A K+F M+ G
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 289 LGETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLI 348
T +L+ A L++E G VH + ++ I V L+ MYAK G + A+L+
Sbjct: 398 YTVTAVLNCCARYRLLDE---GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 457
Query: 349 FDDLVDKDIIAWSAMISAYSHGEDPLNAIQTFK-MMQSTNEKANEITLVSVMNACSSLGA 408
F ++ KDII+W+ +I YS A+ F +++ +E T+ V+ AC+SL A
Sbjct: 458 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 517
Query: 409 QELGGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKG 468
+ G I +I ++GY S+ H+ ++LVD Y G + L +FD+I++KDL+ W MI G
Sbjct: 518 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 577
Query: 469 YGMNGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTP 528
YGM+G+G EA+ F+ M G++ + + F+SLL AC+ GL EGW +F+ M + + P
Sbjct: 578 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 637
Query: 529 TVAHYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGCK---STDIADSIVEQL 588
TV HYAC+VD+LAR G +A F++ + + D IWGAL GC+ +A+ + E++
Sbjct: 638 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 697
Query: 589 TALKQNNSDFYAMLLN 597
L+ N+ +Y ++ N
Sbjct: 698 FELEPENTGYYVLMAN 710
BLAST of Spg031939 vs. ExPASy Swiss-Prot
Match:
Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)
HSP 1 Score: 300.4 bits (768), Expect = 4.4e-80
Identity = 168/566 (29.68%), Postives = 296/566 (52.30%), Query Frame = 0
Query: 37 YYEDPVGFYAQRENVIAWTSKITNLVRTGQPDSAFGLFKTM-FANGHRPNHVTILSVMRA 96
YY + QR +V + + P S+ +F + + +PN T + A
Sbjct: 69 YYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 97 IDASSWESTIEAMHGGVIKMGFESEVAVSTALLGVY-SMLDIGIVWKLFYQIPCKDVVLW 156
+ +HG + G +SE+ + + ++ +Y + K+F ++P KD +LW
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 157 SAMISACVKNGQYIEAFDLIREMQYEG-VQPNHVSIVSILPACADSGALCLGKEIHGFSM 216
+ MIS KN Y+E+ + R++ E + + +++ ILPA A+ L LG +IH +
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 217 RRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFK 276
+ YS + + +YSKC ++ + + RK D+V++ + H N +
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 277 IFSRMKFSGFELGETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYA 336
+F + SG L + ++ ++ + L+L A+H Y LKS FL SV T L +Y+
Sbjct: 309 LFKELMLSGARLRSSTLVSLVP---VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 368
Query: 337 KFGDLGLAKLIFDDLVDKDIIAWSAMISAYSHGEDPLNAIQTFKMMQSTNEKANEITLVS 396
K ++ A+ +FD+ +K + +W+AMIS Y+ +AI F+ MQ + N +T+
Sbjct: 369 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 428
Query: 397 VMNACSSLGAQELGGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKD 456
+++AC+ LGA LG + + + + S+ ++ +AL+ Y G I + +FD ++ K+
Sbjct: 429 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 488
Query: 457 LICWGAMIKGYGMNGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFH 516
+ W MI GYG++G G EALN F +ML+ G+ P V FL +L AC+ GL KEG F+
Sbjct: 489 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 548
Query: 517 SMVDKYNVTPTVAHYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGC---KST 576
SM+ +Y P+V HYACMVD+L R G + A++F++ + +E + +W L C K T
Sbjct: 549 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 608
Query: 577 DIADSIVEQLTALKQNNSDFYAMLLN 597
++A ++ E+L L +N ++ +L N
Sbjct: 609 NLARTVSEKLFELDPDNVGYHVLLSN 631
BLAST of Spg031939 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 297.0 bits (759), Expect = 4.9e-79
Identity = 158/493 (32.05%), Postives = 279/493 (56.59%), Query Frame = 0
Query: 108 MHGGVIKMGFESEVAVSTALLGVYSML-DIGIVWKLFYQIPCKDVVLWSAMISACVKNGQ 167
+HG ++K GF ++ T L +Y+ + K+F ++P +D+V W+ +++ +NG
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM 216
Query: 168 YIEAFDLIREMQYEGVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNS 227
A ++++ M E ++P+ ++IVS+LPA + + +GKEIHG++MR F SLVNI +
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 228 LMDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELG 287
L+DMY+KC +LE + ++ M ++++VSW ++ A +QN NP +A IF +M G +
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 288 ETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFD 347
+ ++ + A + +L G +H +++ G +SV L+ MY K ++ A +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 348 DLVDKDIIAWSAMISAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQEL 407
L + +++W+AMI ++ P++A+ F M+S K + T VSV+ A + L
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 408 GGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGM 467
I + +S N + +ALVD Y G I + + +FD +S + + W AMI GYG
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 468 NGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVA 527
+G+G AL F +M +KPNGV FLS++SAC+ GL + G F+ M + Y++ ++
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 528 HYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGC---KSTDIADSIVEQLTAL 587
HY MVDLL R G+ EA +F+ ++ V+ ++GA+ C K+ + A+ E+L L
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 588 KQNNSDFYAMLLN 597
++ ++ +L N
Sbjct: 637 NPDDGGYHVLLAN 649
BLAST of Spg031939 vs. ExPASy Swiss-Prot
Match:
P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)
HSP 1 Score: 295.4 bits (755), Expect = 1.4e-78
Identity = 178/559 (31.84%), Postives = 297/559 (53.13%), Query Frame = 0
Query: 49 ENVIAWTSKITNLVRTGQPDSAF---GLFKTMFANGHRPNHVTILSVMRAIDASSWESTI 108
++V++W S IT + G S++ LF+ M A PN T+ + +A ++S ST+
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA-ESSLQSSTV 137
Query: 109 -EAMHGGVIKMGFESEVAVSTALLGVY---SMLDIGIVWKLFYQIPCKDVVLWSAMISAC 168
H V+KM ++ V T+L+G+Y +++ G+ K+F +P ++ WS M+S
Sbjct: 138 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL--KVFAYMPERNTYTWSTMVSGY 197
Query: 169 VKNGQYIEA---FDLIREMQYEGVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFY 228
G+ EA F+L + EG ++V ++L + A + + LG++IH +++
Sbjct: 198 ATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLL 257
Query: 229 SLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRM 288
V + N+L+ MYSKC +L + ++ ++ ++W + QN +A K+FSRM
Sbjct: 258 GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 317
Query: 289 KFSGFELGETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDL 348
+G + E ++ ++ A + L G +H + LK GF + T L+ MYAK G L
Sbjct: 318 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 377
Query: 349 GLAKLIFDDLVDKDIIAWSAMISAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNAC 408
A+ FD L ++D+ W+++IS Y D A+ ++ M++ N+ T+ SV+ AC
Sbjct: 378 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 437
Query: 409 SSLGAQELGGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWG 468
SSL ELG + H K G+ + SAL Y G ++ G VF KD++ W
Sbjct: 438 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWN 497
Query: 469 AMIKGYGMNGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDK 528
AMI G NG G+EAL F +ML+ G++P+ V F++++SAC+ G + GW +F+ M D+
Sbjct: 498 AMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQ 557
Query: 529 YNVTPTVAHYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGCKS---TDIADS 588
+ P V HYACMVDLL+R G+ +EA EF++ ++ +W L S CK+ ++
Sbjct: 558 IGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVY 617
Query: 589 IVEQLTALKQNNSDFYAML 595
E+L AL S Y L
Sbjct: 618 AGEKLMALGSRESSTYVQL 632
BLAST of Spg031939 vs. ExPASy Swiss-Prot
Match:
Q9XE98 (Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E99 PE=3 SV=1)
HSP 1 Score: 285.8 bits (730), Expect = 1.1e-75
Identity = 170/556 (30.58%), Postives = 294/556 (52.88%), Query Frame = 0
Query: 47 QRENVIAWTSKITNLVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIE 106
+ +V+ WT+ I R G A L M G +P VT+L ++ + + ++
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEI---TQLQ 167
Query: 107 AMHGGVIKMGFESEVAVSTALLGVYSMLD-IGIVWKLFYQIPCKDVVLWSAMISACVKNG 166
+H + GF+ ++AV ++L +Y D +G LF Q+ +D+V W+ MIS G
Sbjct: 168 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 227
Query: 167 QYIEAFDLIREMQYEGVQPNHVSIVSILPACADSGALC---LGKEIHGFSMRRDFYSLVN 226
E L+ M+ +G++P+ + + L SG +C +G+ +H ++ F ++
Sbjct: 228 NMSEILKLLYRMRGDGLRPDQQTFGASLSV---SGTMCDLEMGRMLHCQIVKTGFDVDMH 287
Query: 227 IQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSG 286
++ +L+ MY KC EAS RVL+ + KD+V W + ++ KA +FS M SG
Sbjct: 288 LKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSG 347
Query: 287 FELGETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAK 346
+L + ++A+ + LG +VH Y L+ G+ L+ MYAK G L +
Sbjct: 348 SDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSL 407
Query: 347 LIFDDLVDKDIIAWSAMISAYSHGEDPLNAIQTFKMMQ-STNEKANEITLVSVMNACSSL 406
+IF+ + ++D+++W+A+IS Y+ D A+ F+ M+ T ++ + T+VS++ ACSS
Sbjct: 408 VIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSA 467
Query: 407 GAQELGGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMI 466
GA +G I + +S + + +ALVD Y G ++ + FD IS KD++ WG +I
Sbjct: 468 GALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILI 527
Query: 467 KGYGMNGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNV 526
GYG +G G+ AL +S+ L G++PN V+FL++LS+C+ G+ ++G F SMV + V
Sbjct: 528 AGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV 587
Query: 527 TPTVAHYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGCKS---TDIADSIVE 586
P H AC+VDLL R + +A +F K+ + G + C++ T++ D I E
Sbjct: 588 EPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICE 647
Query: 587 QLTALKQNNSDFYAML 595
+ LK ++ Y L
Sbjct: 648 DMIELKPGDAGHYVKL 657
BLAST of Spg031939 vs. ExPASy TrEMBL
Match:
A0A6J1D2H4 (pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016401 PE=4 SV=1)
HSP 1 Score: 1021.5 bits (2640), Expect = 1.4e-294
Identity = 510/602 (84.72%), Postives = 547/602 (90.86%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAIST-KTQTYYEDPVGFYAQRENVIAWTSKIT 60
MLCFSRCARNLFVKSPQRK Y I ++A S+ K Q YYEDPVGFYAQRE+VI+WTSKIT
Sbjct: 1 MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKIT 60
Query: 61 NLVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFES 120
NLVRTGQ ++AFG FKTMFANGHRPNHVT+LSV+RAIDA SWES E +HGGVIKMGFES
Sbjct: 61 NLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFES 120
Query: 121 EVAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQY 180
EVAVSTALLG YS DIG VWKLFYQIP KD+VLWSAMISACVKNGQ+IEA DL REMQY
Sbjct: 121 EVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQY 180
Query: 181 EGVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240
+GVQPNHVSIVS+LPACADSG + LGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA
Sbjct: 181 QGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240
Query: 241 SIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLL 300
SIRVLKMMRKKDMVSWRT+T+ACIQNN PSKAFKIFSRM+ GFELG+TMML IIAAVLL
Sbjct: 241 SIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAVLL 300
Query: 301 VEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAM 360
VEELLLGLAVHCYALK GFLCFI+VGTE+LQMYAKFG LGLAKLIFD+LVDKDIIAWSAM
Sbjct: 301 VEELLLGLAVHCYALKGGFLCFIAVGTEILQMYAKFGHLGLAKLIFDELVDKDIIAWSAM 360
Query: 361 ISAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGY 420
ISAYSHGEDPLNAIQTFKMMQSTNEK NEIT VS++NACSSLGAQELG SI AHI KSG
Sbjct: 361 ISAYSHGEDPLNAIQTFKMMQSTNEKPNEITFVSLVNACSSLGAQELGESIHAHIMKSGC 420
Query: 421 SSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSD 480
SSNTHLMSA VD YCTLGRIK GKHVFDEISTKDLICW MIKGYGMNG GNEAL+TFSD
Sbjct: 421 SSNTHLMSAFVDLYCTLGRIKQGKHVFDEISTKDLICWSTMIKGYGMNGCGNEALDTFSD 480
Query: 481 MLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKG 540
MLS GLKPNGVLF+SLLSACAQCG+EKEGW+WF SM+DKYN+TPTVAHYACMVDLL R+G
Sbjct: 481 MLSCGLKPNGVLFVSLLSACAQCGIEKEGWVWFRSMIDKYNITPTVAHYACMVDLLVRQG 540
Query: 541 KTREAVEFVKKILVESDTRIWGALFSGCKST----DIADSIVEQLTALKQNNSDFYAMLL 598
K REAVEFVKK+ VE DTRIWGALF+GCK T DI DSIVEQLTA++ NNS+FYAMLL
Sbjct: 541 KIREAVEFVKKMPVEPDTRIWGALFTGCKLTHGFPDIVDSIVEQLTAMEPNNSNFYAMLL 600
BLAST of Spg031939 vs. ExPASy TrEMBL
Match:
A0A6J1IGR3 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473280 PE=4 SV=1)
HSP 1 Score: 1017.3 bits (2629), Expect = 2.6e-293
Identity = 505/601 (84.03%), Postives = 545/601 (90.68%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAISTKTQTYYEDPVGFYAQRENVIAWTSKITN 60
MLCFSRCARNLFVK+PQRK YTI IDA S K Q YYEDPVGF+AQ+E+VI+WTSKITN
Sbjct: 1 MLCFSRCARNLFVKNPQRKNYTIGPVIDATSAKKQAYYEDPVGFFAQQEDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFESE 120
LVRTGQPDSAFG FK MFANGHRPNHVT+LSV+RAIDA SWESTIE MHGGVIKMGFESE
Sbjct: 61 LVRTGQPDSAFGFFKMMFANGHRPNHVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
Query: 121 VAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQYE 180
VAVSTALLG YSM DIGIVWKLFYQIP KDVVLWSA+ISACVKNGQ+IEAF L REMQY+
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKNGQFIEAFHLFREMQYQ 180
Query: 181 GVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEAS 240
GV PNHVSIVSILPACAD GAL LGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVHPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
Query: 241 IRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLLV 300
IRVLK MRKKDMVSWRT+THACIQNN PSKAFKIF+RM+ GFELGETMMLD IAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
Query: 301 EELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAMI 360
+EL+LGLAVHCYALK GFLCFISVGTELLQMYAKFG+LGLAKL FD+LVDKDIIAWSAMI
Sbjct: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGYS 420
SAYSHGE+PL+ IQTFKMMQSTNE+ N IT VS++NACSSL AQELG SI AHITKSGYS
Sbjct: 361 SAYSHGEEPLSVIQTFKMMQSTNERPNAITFVSLVNACSSLDAQELGESIHAHITKSGYS 420
Query: 421 SNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSDM 480
SNT LMSALVDFYC L R+KLG+HVFDEI TKDL+CW MIKGYGMNG+GNEALNTFSDM
Sbjct: 421 SNTRLMSALVDFYCILRRVKLGEHVFDEILTKDLVCWSTMIKGYGMNGYGNEALNTFSDM 480
Query: 481 LSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKGK 540
LSYGLK NG LF+SLLSACAQCGLEKEGWMWF+SM+D+YN+TPTVAHYACMV+LLAR+GK
Sbjct: 481 LSYGLKLNGTLFVSLLSACAQCGLEKEGWMWFNSMIDEYNITPTVAHYACMVELLARQGK 540
Query: 541 TREAVEFVKKILVESDTRIWGALFSGCK----STDIADSIVEQLTALKQNNSDFYAMLLN 598
REAVEFV K+ VE DTRI GALF+GCK +DIADSIV+QL AL+ NNSDF+AML N
Sbjct: 541 IREAVEFVNKMAVEPDTRICGALFAGCKLNHGFSDIADSIVQQLNALEPNNSDFHAMLHN 600
BLAST of Spg031939 vs. ExPASy TrEMBL
Match:
A0A6J1F1Z2 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441423 PE=4 SV=1)
HSP 1 Score: 978.8 bits (2529), Expect = 1.0e-281
Identity = 488/588 (82.99%), Postives = 528/588 (89.80%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAISTKTQTYYEDPVGFYAQRENVIAWTSKITN 60
MLCFSRCARNLFVKSPQRK YTI ID S K Q YYEDPVGF+A++E+VI+WTSKITN
Sbjct: 1 MLCFSRCARNLFVKSPQRKNYTIGSVIDDTSAKKQAYYEDPVGFFAKQEDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFESE 120
LVRTGQPDSAFG FK MFANGHRPN+VT+LSV+RAIDA SWESTIE MHGGVIKMGFESE
Sbjct: 61 LVRTGQPDSAFGFFKMMFANGHRPNYVTMLSVLRAIDALSWESTIEVMHGGVIKMGFESE 120
Query: 121 VAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQYE 180
VAVSTALLG YSM DIGIVWKLFYQIP KDVVLWSA+ISACVK+GQ EAF L REMQY+
Sbjct: 121 VAVSTALLGFYSMRDIGIVWKLFYQIPYKDVVLWSAVISACVKHGQCSEAFHLFREMQYQ 180
Query: 181 GVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEAS 240
GV+PNHVSIVSILPACAD GAL LGKEIH FSMRRDFYS+VNIQNSLMDMYSKCRNLEAS
Sbjct: 181 GVRPNHVSIVSILPACADFGALSLGKEIHAFSMRRDFYSIVNIQNSLMDMYSKCRNLEAS 240
Query: 241 IRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLLV 300
IRVLK MRKKDMVSWRT+THACIQNN PSKAFKIF+RM+ GFELGETMMLD IAAVLLV
Sbjct: 241 IRVLKTMRKKDMVSWRTVTHACIQNNCPSKAFKIFTRMRSFGFELGETMMLDFIAAVLLV 300
Query: 301 EELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAMI 360
+EL+LGLAVHCYALK GFLCFISVGTELLQMYAKFG+LGLAKL FD+LVDKDIIAWSAMI
Sbjct: 301 DELVLGLAVHCYALKGGFLCFISVGTELLQMYAKFGELGLAKLTFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGYS 420
SAYSHGE+PL+AIQTFKMMQSTNE+ N IT S++NACSSL AQELG SI AHITKSGYS
Sbjct: 361 SAYSHGEEPLSAIQTFKMMQSTNERPNAITFGSLVNACSSLDAQELGESIHAHITKSGYS 420
Query: 421 SNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSDM 480
SNT LMSALVDFYC L R+KLG+HVF EI TKDL+CW MIKGYGMNG+G EALNTFSDM
Sbjct: 421 SNTRLMSALVDFYCILRRVKLGEHVFYEILTKDLVCWSTMIKGYGMNGYGKEALNTFSDM 480
Query: 481 LSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKGK 540
LSYGLKPNG LF+SLLSACAQCGLEK GWMWF+SM+D+YN+TPTVAHYACMV+LLAR+GK
Sbjct: 481 LSYGLKPNGTLFVSLLSACAQCGLEKAGWMWFNSMIDEYNITPTVAHYACMVELLARQGK 540
Query: 541 TREAVEFVKKILVESDTRIWGALFSGCKST----DIADSIVEQLTALK 585
VEFVKK+ VE DTRIWGALF+GCK T DIADSIV+QL A +
Sbjct: 541 ---IVEFVKKMAVEPDTRIWGALFAGCKLTHGFSDIADSIVQQLNAFR 585
BLAST of Spg031939 vs. ExPASy TrEMBL
Match:
A0A6J1D1G5 (pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016401 PE=4 SV=1)
HSP 1 Score: 956.4 bits (2471), Expect = 5.5e-275
Identity = 484/602 (80.40%), Postives = 520/602 (86.38%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAIST-KTQTYYEDPVGFYAQRENVIAWTSKIT 60
MLCFSRCARNLFVKSPQRK Y I ++A S+ K Q YYEDPVGFYAQRE+VI+WTSKIT
Sbjct: 1 MLCFSRCARNLFVKSPQRKNYMIDPMVEATSSNKKQAYYEDPVGFYAQREDVISWTSKIT 60
Query: 61 NLVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFES 120
NLVRTGQ ++AFG FKTMFANGHRPNHVT+LSV+RAIDA SWES E +HGGVIKMGFES
Sbjct: 61 NLVRTGQSEAAFGFFKTMFANGHRPNHVTMLSVIRAIDALSWESMNEVVHGGVIKMGFES 120
Query: 121 EVAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQY 180
EVAVSTALLG YS DIG VWKLFYQIP KD+VLWSAMISACVKNGQ+IEA DL REMQY
Sbjct: 121 EVAVSTALLGFYSNRDIGTVWKLFYQIPYKDIVLWSAMISACVKNGQFIEALDLFREMQY 180
Query: 181 EGVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240
+GVQPNHVSIVS+LPACADSG + LGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA
Sbjct: 181 QGVQPNHVSIVSVLPACADSGVISLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEA 240
Query: 241 SIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLL 300
SIRVLKMMRKKDMVSWRT+T+ACIQNN PSKAFKIFSRM+ GFELG+TMML IIAAVLL
Sbjct: 241 SIRVLKMMRKKDMVSWRTVTNACIQNNCPSKAFKIFSRMRSFGFELGKTMMLAIIAAVLL 300
Query: 301 VEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAM 360
VEELLLGLAVHCYALK GFLCFI+VGTE+LQMYAKFG LGLAKLIFD+LVDKDIIAWSAM
Sbjct: 301 VEELLLGLAVHCYALKGGFLCFIAVGTEILQMYAKFGHLGLAKLIFDELVDKDIIAWSAM 360
Query: 361 ISAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGY 420
ISAYSH +NACSSLGAQELG SI AHI KSG
Sbjct: 361 ISAYSH-----------------------------VNACSSLGAQELGESIHAHIMKSGC 420
Query: 421 SSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSD 480
SSNTHLMSA VD YCTLGRIK GKHVFDEISTKDLICW MIKGYGMNG GNEAL+TFSD
Sbjct: 421 SSNTHLMSAFVDLYCTLGRIKQGKHVFDEISTKDLICWSTMIKGYGMNGCGNEALDTFSD 480
Query: 481 MLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKG 540
MLS GLKPNGVLF+SLLSACAQCG+EKEGW+WF SM+DKYN+TPTVAHYACMVDLL R+G
Sbjct: 481 MLSCGLKPNGVLFVSLLSACAQCGIEKEGWVWFRSMIDKYNITPTVAHYACMVDLLVRQG 540
Query: 541 KTREAVEFVKKILVESDTRIWGALFSGCKST----DIADSIVEQLTALKQNNSDFYAMLL 598
K REAVEFVKK+ VE DTRIWGALF+GCK T DI DSIVEQLTA++ NNS+FYAMLL
Sbjct: 541 KIREAVEFVKKMPVEPDTRIWGALFTGCKLTHGFPDIVDSIVEQLTAMEPNNSNFYAMLL 573
BLAST of Spg031939 vs. ExPASy TrEMBL
Match:
A0A1S4DSI8 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo OX=3656 GN=LOC103484166 PE=4 SV=1)
HSP 1 Score: 925.2 bits (2390), Expect = 1.3e-265
Identity = 459/570 (80.53%), Postives = 501/570 (87.89%), Query Frame = 0
Query: 1 MLCFSRCARNLFVKSPQRKFYTIAQKIDAISTKTQTYYEDPVGFYAQRENVIAWTSKITN 60
MLCFSRCARNLFV SP RK YTI +DA STK + Y+EDPV FYAQRE+VI+WTSKITN
Sbjct: 1 MLCFSRCARNLFVISPNRKNYTIRSMMDATSTKKRGYFEDPVEFYAQREDVISWTSKITN 60
Query: 61 LVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAMHGGVIKMGFESE 120
LVR GQP+SAFG FK MF+NGHRPN+VT+LSV+RAIDA SW+S IE MHG IKMGFESE
Sbjct: 61 LVRAGQPESAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVTIKMGFESE 120
Query: 121 VAVSTALLGVYSMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQYIEAFDLIREMQYE 180
VAVSTALLG YS+ DI VWKLF QIPCKDVV WSA+ISACVKNGQY EAFDL+REMQ +
Sbjct: 121 VAVSTALLGFYSIRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQ 180
Query: 181 GVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSLMDMYSKCRNLEAS 240
GVQPN VSIVSILPACAD G L LGKE+H FSMR+DFYS+V+IQNSLMDMYSKCR EAS
Sbjct: 181 GVQPNQVSIVSILPACADFGVLSLGKELHAFSMRKDFYSMVDIQNSLMDMYSKCRMFEAS 240
Query: 241 IRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELGETMMLDIIAAVLLV 300
I+VLK+MRKKD VSW+ ITHACIQNN PS+ FKIFSRM+ GFEL ETM+LD+I+AVLLV
Sbjct: 241 IKVLKLMRKKDAVSWKIITHACIQNNYPSEVFKIFSRMRSLGFELSETMVLDMISAVLLV 300
Query: 301 EELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFDDLVDKDIIAWSAMI 360
+ELLLGLAVHCYALK GFLCFI VGTELLQMYAKFGDL LAKL+FD+LVDKDIIAWSAMI
Sbjct: 301 DELLLGLAVHCYALKGGFLCFILVGTELLQMYAKFGDLRLAKLVFDELVDKDIIAWSAMI 360
Query: 361 SAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQELGGSIQAHITKSGYS 420
S YSHGEDPLNAIQTFKMMQSTNEK NE T VS+M+ACSSLGA+ELG SIQAH K GY+
Sbjct: 361 SVYSHGEDPLNAIQTFKMMQSTNEKPNERTFVSLMDACSSLGAKELGESIQAHTIKCGYT 420
Query: 421 SNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGMNGWGNEALNTFSDM 480
SNTHLMSALV FYCTLGRIKLG+HVFDEISTKDLICW AMIKGYG+NG GN+ALNTFSDM
Sbjct: 421 SNTHLMSALVGFYCTLGRIKLGEHVFDEISTKDLICWNAMIKGYGLNGCGNKALNTFSDM 480
Query: 481 LSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVAHYACMVDLLARKGK 540
LSYGLKPNGV+F SLLSACAQCGLEKE MWF SM+DKY +TPT AHYAC+VDLL RKGK
Sbjct: 481 LSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMIDKYGITPTEAHYACIVDLLVRKGK 540
Query: 541 TREAVEFVKKILVESDTRIWGALFSGCKST 571
EAVEFVK + VE DTRIWGAL GCK T
Sbjct: 541 IGEAVEFVKXMPVEPDTRIWGALLLGCKLT 570
BLAST of Spg031939 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 307.8 bits (787), Expect = 2.0e-83
Identity = 173/556 (31.12%), Postives = 299/556 (53.78%), Query Frame = 0
Query: 49 ENVIAWTSKITNLVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIEAM 108
E + W + L ++G + GLFK M ++G + T V ++ + E +
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 217
Query: 109 HGGVIKMGFESEVAVSTALLGVY-SMLDIGIVWKLFYQIPCKDVVLWSAMISACVKNGQY 168
HG ++K GF +V +L+ Y + K+F ++ +DV+ W+++I+ V NG
Sbjct: 218 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 169 IEAFDLIREMQYEGVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNSL 228
+ + +M G++ + +IVS+ CADS + LG+ +H ++ F N+L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 229 MDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFE--- 288
+DMYSKC +L+++ V + M + +VS+ ++ + +A K+F M+ G
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 289 LGETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLI 348
T +L+ A L++E G VH + ++ I V L+ MYAK G + A+L+
Sbjct: 398 YTVTAVLNCCARYRLLDE---GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 457
Query: 349 FDDLVDKDIIAWSAMISAYSHGEDPLNAIQTFK-MMQSTNEKANEITLVSVMNACSSLGA 408
F ++ KDII+W+ +I YS A+ F +++ +E T+ V+ AC+SL A
Sbjct: 458 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 517
Query: 409 QELGGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKG 468
+ G I +I ++GY S+ H+ ++LVD Y G + L +FD+I++KDL+ W MI G
Sbjct: 518 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 577
Query: 469 YGMNGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTP 528
YGM+G+G EA+ F+ M G++ + + F+SLL AC+ GL EGW +F+ M + + P
Sbjct: 578 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 637
Query: 529 TVAHYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGCK---STDIADSIVEQL 588
TV HYAC+VD+LAR G +A F++ + + D IWGAL GC+ +A+ + E++
Sbjct: 638 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 697
Query: 589 TALKQNNSDFYAMLLN 597
L+ N+ +Y ++ N
Sbjct: 698 FELEPENTGYYVLMAN 710
BLAST of Spg031939 vs. TAIR 10
Match:
AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 300.4 bits (768), Expect = 3.1e-81
Identity = 168/566 (29.68%), Postives = 296/566 (52.30%), Query Frame = 0
Query: 37 YYEDPVGFYAQRENVIAWTSKITNLVRTGQPDSAFGLFKTM-FANGHRPNHVTILSVMRA 96
YY + QR +V + + P S+ +F + + +PN T + A
Sbjct: 69 YYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 97 IDASSWESTIEAMHGGVIKMGFESEVAVSTALLGVY-SMLDIGIVWKLFYQIPCKDVVLW 156
+ +HG + G +SE+ + + ++ +Y + K+F ++P KD +LW
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 157 SAMISACVKNGQYIEAFDLIREMQYEG-VQPNHVSIVSILPACADSGALCLGKEIHGFSM 216
+ MIS KN Y+E+ + R++ E + + +++ ILPA A+ L LG +IH +
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 217 RRDFYSLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFK 276
+ YS + + +YSKC ++ + + RK D+V++ + H N +
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 277 IFSRMKFSGFELGETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYA 336
+F + SG L + ++ ++ + L+L A+H Y LKS FL SV T L +Y+
Sbjct: 309 LFKELMLSGARLRSSTLVSLVP---VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYS 368
Query: 337 KFGDLGLAKLIFDDLVDKDIIAWSAMISAYSHGEDPLNAIQTFKMMQSTNEKANEITLVS 396
K ++ A+ +FD+ +K + +W+AMIS Y+ +AI F+ MQ + N +T+
Sbjct: 369 KLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITC 428
Query: 397 VMNACSSLGAQELGGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKD 456
+++AC+ LGA LG + + + + S+ ++ +AL+ Y G I + +FD ++ K+
Sbjct: 429 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 488
Query: 457 LICWGAMIKGYGMNGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFH 516
+ W MI GYG++G G EALN F +ML+ G+ P V FL +L AC+ GL KEG F+
Sbjct: 489 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 548
Query: 517 SMVDKYNVTPTVAHYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGC---KST 576
SM+ +Y P+V HYACMVD+L R G + A++F++ + +E + +W L C K T
Sbjct: 549 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 608
Query: 577 DIADSIVEQLTALKQNNSDFYAMLLN 597
++A ++ E+L L +N ++ +L N
Sbjct: 609 NLARTVSEKLFELDPDNVGYHVLLSN 631
BLAST of Spg031939 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 297.0 bits (759), Expect = 3.5e-80
Identity = 158/493 (32.05%), Postives = 279/493 (56.59%), Query Frame = 0
Query: 108 MHGGVIKMGFESEVAVSTALLGVYSML-DIGIVWKLFYQIPCKDVVLWSAMISACVKNGQ 167
+HG ++K GF ++ T L +Y+ + K+F ++P +D+V W+ +++ +NG
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM 216
Query: 168 YIEAFDLIREMQYEGVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFYSLVNIQNS 227
A ++++ M E ++P+ ++IVS+LPA + + +GKEIHG++MR F SLVNI +
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 228 LMDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSGFELG 287
L+DMY+KC +LE + ++ M ++++VSW ++ A +QN NP +A IF +M G +
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 288 ETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAKLIFD 347
+ ++ + A + +L G +H +++ G +SV L+ MY K ++ A +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 348 DLVDKDIIAWSAMISAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNACSSLGAQEL 407
L + +++W+AMI ++ P++A+ F M+S K + T VSV+ A + L
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 408 GGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMIKGYGM 467
I + +S N + +ALVD Y G I + + +FD +S + + W AMI GYG
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 468 NGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNVTPTVA 527
+G+G AL F +M +KPNGV FLS++SAC+ GL + G F+ M + Y++ ++
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 528 HYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGC---KSTDIADSIVEQLTAL 587
HY MVDLL R G+ EA +F+ ++ V+ ++GA+ C K+ + A+ E+L L
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 588 KQNNSDFYAMLLN 597
++ ++ +L N
Sbjct: 637 NPDDGGYHVLLAN 649
BLAST of Spg031939 vs. TAIR 10
Match:
AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 295.4 bits (755), Expect = 1.0e-79
Identity = 178/559 (31.84%), Postives = 297/559 (53.13%), Query Frame = 0
Query: 49 ENVIAWTSKITNLVRTGQPDSAF---GLFKTMFANGHRPNHVTILSVMRAIDASSWESTI 108
++V++W S IT + G S++ LF+ M A PN T+ + +A ++S ST+
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA-ESSLQSSTV 137
Query: 109 -EAMHGGVIKMGFESEVAVSTALLGVY---SMLDIGIVWKLFYQIPCKDVVLWSAMISAC 168
H V+KM ++ V T+L+G+Y +++ G+ K+F +P ++ WS M+S
Sbjct: 138 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL--KVFAYMPERNTYTWSTMVSGY 197
Query: 169 VKNGQYIEA---FDLIREMQYEGVQPNHVSIVSILPACADSGALCLGKEIHGFSMRRDFY 228
G+ EA F+L + EG ++V ++L + A + + LG++IH +++
Sbjct: 198 ATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLL 257
Query: 229 SLVNIQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRM 288
V + N+L+ MYSKC +L + ++ ++ ++W + QN +A K+FSRM
Sbjct: 258 GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 317
Query: 289 KFSGFELGETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDL 348
+G + E ++ ++ A + L G +H + LK GF + T L+ MYAK G L
Sbjct: 318 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 377
Query: 349 GLAKLIFDDLVDKDIIAWSAMISAYSHGEDPLNAIQTFKMMQSTNEKANEITLVSVMNAC 408
A+ FD L ++D+ W+++IS Y D A+ ++ M++ N+ T+ SV+ AC
Sbjct: 378 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 437
Query: 409 SSLGAQELGGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWG 468
SSL ELG + H K G+ + SAL Y G ++ G VF KD++ W
Sbjct: 438 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWN 497
Query: 469 AMIKGYGMNGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDK 528
AMI G NG G+EAL F +ML+ G++P+ V F++++SAC+ G + GW +F+ M D+
Sbjct: 498 AMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQ 557
Query: 529 YNVTPTVAHYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGCKS---TDIADS 588
+ P V HYACMVDLL+R G+ +EA EF++ ++ +W L S CK+ ++
Sbjct: 558 IGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVY 617
Query: 589 IVEQLTALKQNNSDFYAML 595
E+L AL S Y L
Sbjct: 618 AGEKLMALGSRESSTYVQL 632
BLAST of Spg031939 vs. TAIR 10
Match:
AT4G04370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 285.8 bits (730), Expect = 8.0e-77
Identity = 170/556 (30.58%), Postives = 294/556 (52.88%), Query Frame = 0
Query: 47 QRENVIAWTSKITNLVRTGQPDSAFGLFKTMFANGHRPNHVTILSVMRAIDASSWESTIE 106
+ +V+ WT+ I R G A L M G +P VT+L ++ + + ++
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEI---TQLQ 167
Query: 107 AMHGGVIKMGFESEVAVSTALLGVYSMLD-IGIVWKLFYQIPCKDVVLWSAMISACVKNG 166
+H + GF+ ++AV ++L +Y D +G LF Q+ +D+V W+ MIS G
Sbjct: 168 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 227
Query: 167 QYIEAFDLIREMQYEGVQPNHVSIVSILPACADSGALC---LGKEIHGFSMRRDFYSLVN 226
E L+ M+ +G++P+ + + L SG +C +G+ +H ++ F ++
Sbjct: 228 NMSEILKLLYRMRGDGLRPDQQTFGASLSV---SGTMCDLEMGRMLHCQIVKTGFDVDMH 287
Query: 227 IQNSLMDMYSKCRNLEASIRVLKMMRKKDMVSWRTITHACIQNNNPSKAFKIFSRMKFSG 286
++ +L+ MY KC EAS RVL+ + KD+V W + ++ KA +FS M SG
Sbjct: 288 LKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSG 347
Query: 287 FELGETMMLDIIAAVLLVEELLLGLAVHCYALKSGFLCFISVGTELLQMYAKFGDLGLAK 346
+L + ++A+ + LG +VH Y L+ G+ L+ MYAK G L +
Sbjct: 348 SDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSL 407
Query: 347 LIFDDLVDKDIIAWSAMISAYSHGEDPLNAIQTFKMMQ-STNEKANEITLVSVMNACSSL 406
+IF+ + ++D+++W+A+IS Y+ D A+ F+ M+ T ++ + T+VS++ ACSS
Sbjct: 408 VIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSA 467
Query: 407 GAQELGGSIQAHITKSGYSSNTHLMSALVDFYCTLGRIKLGKHVFDEISTKDLICWGAMI 466
GA +G I + +S + + +ALVD Y G ++ + FD IS KD++ WG +I
Sbjct: 468 GALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILI 527
Query: 467 KGYGMNGWGNEALNTFSDMLSYGLKPNGVLFLSLLSACAQCGLEKEGWMWFHSMVDKYNV 526
GYG +G G+ AL +S+ L G++PN V+FL++LS+C+ G+ ++G F SMV + V
Sbjct: 528 AGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV 587
Query: 527 TPTVAHYACMVDLLARKGKTREAVEFVKKILVESDTRIWGALFSGCKS---TDIADSIVE 586
P H AC+VDLL R + +A +F K+ + G + C++ T++ D I E
Sbjct: 588 EPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICE 647
Query: 587 QLTALKQNNSDFYAML 595
+ LK ++ Y L
Sbjct: 648 DMIELKPGDAGHYVKL 657
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022147491.1 | 2.9e-294 | 84.72 | pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 [Momo... | [more] |
XP_023538701.1 | 4.1e-293 | 84.19 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... | [more] |
XP_022974593.1 | 5.4e-293 | 84.03 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... | [more] |
KAG7028589.1 | 7.8e-292 | 83.53 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic, partial [Cucurb... | [more] |
XP_022934182.1 | 2.1e-281 | 82.99 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9SN39 | 2.8e-82 | 31.12 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q9SUH6 | 4.4e-80 | 29.68 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... | [more] |
Q3E6Q1 | 4.9e-79 | 32.05 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
P93005 | 1.4e-78 | 31.84 | Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX... | [more] |
Q9XE98 | 1.1e-75 | 30.58 | Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D2H4 | 1.4e-294 | 84.72 | pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X1 OS=Mo... | [more] |
A0A6J1IGR3 | 2.6e-293 | 84.03 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbit... | [more] |
A0A6J1F1Z2 | 1.0e-281 | 82.99 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbit... | [more] |
A0A6J1D1G5 | 5.5e-275 | 80.40 | pentatricopeptide repeat-containing protein DOT4, chloroplastic isoform X2 OS=Mo... | [more] |
A0A1S4DSI8 | 1.3e-265 | 80.53 | LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56... | [more] |
Match Name | E-value | Identity | Description | |
AT4G18750.1 | 2.0e-83 | 31.12 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G30700.1 | 3.1e-81 | 29.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G11290.1 | 3.5e-80 | 32.05 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G33680.1 | 1.0e-79 | 31.84 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G04370.1 | 8.0e-77 | 30.58 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |