Spg031929 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg031929
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionHeparan-alpha-glucosaminide n-acetyltransferase
Locationscaffold11: 37298759 .. 37299028 (-)
RNA-Seq ExpressionSpg031929
SyntenySpg031929
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCTGAAGAACCCAATTCCAGAGCATTCGATCTCGCCACCGCCACCGGCGGAAATCAACCGACAAAGTCAGAGAAGAATTCCAACTCGAAAGCCGCCGCCGCCGTCTGCTCCAATAATATGGGGAAGGCTTTGGCACAGAGGGCAGTTTATGGATCTCAACAGCGGCGGACAGGAAGAAGAAAAAACCTCATCCATGGCGTCCGGCTGCTGCCTAGCAGGCTGAGCAAAGTTTCTTTAGCTGATAACTCCTCAGGCTCTGATTAA

mRNA sequence

ATGAGTTCTGAAGAACCCAATTCCAGAGCATTCGATCTCGCCACCGCCACCGGCGGAAATCAACCGACAAAGTCAGAGAAGAATTCCAACTCGAAAGCCGCCGCCGCCGTCTGCTCCAATAATATGGGGAAGGCTTTGGCACAGAGGGCAGTTTATGGATCTCAACAGCGGCGGACAGGAAGAAGAAAAAACCTCATCCATGGCGTCCGGCTGCTGCCTAGCAGGCTGAGCAAAGTTTCTTTAGCTGATAACTCCTCAGGCTCTGATTAA

Coding sequence (CDS)

ATGAGTTCTGAAGAACCCAATTCCAGAGCATTCGATCTCGCCACCGCCACCGGCGGAAATCAACCGACAAAGTCAGAGAAGAATTCCAACTCGAAAGCCGCCGCCGCCGTCTGCTCCAATAATATGGGGAAGGCTTTGGCACAGAGGGCAGTTTATGGATCTCAACAGCGGCGGACAGGAAGAAGAAAAAACCTCATCCATGGCGTCCGGCTGCTGCCTAGCAGGCTGAGCAAAGTTTCTTTAGCTGATAACTCCTCAGGCTCTGATTAA

Protein sequence

MSSEEPNSRAFDLATATGGNQPTKSEKNSNSKAAAAVCSNNMGKALAQRAVYGSQQRRTGRRKNLIHGVRLLPSRLSKVSLADNSSGSD
Homology
BLAST of Spg031929 vs. NCBI nr
Match: KAG6597562.1 (hypothetical protein SDJN03_10742, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-20
Identity = 66/94 (70.21%), Postives = 74/94 (78.72%), Query Frame = 0

Query: 1  MSSEEPNSRAFD-----LATATGGNQPTKSEKNSNSKAAAAVCSNNMGKALAQRAVYGSQ 60
          MSSE P+SR FD      AT   GNQPTK EKN +SKAAA   S+N+GKALA RAVYG+Q
Sbjct: 1  MSSERPDSRGFDPAITMPATGVTGNQPTKPEKNPSSKAAA---SSNVGKALAHRAVYGAQ 60

Query: 61 QRRTGRRKNLIHGVRLLPSRLSKVSLADNSSGSD 90
          +R TGRR+N +HGVRLLPSRLSKVSLADNSS SD
Sbjct: 61 KRWTGRRRNPVHGVRLLPSRLSKVSLADNSSPSD 91

BLAST of Spg031929 vs. NCBI nr
Match: KGN57150.1 (hypothetical protein Csa_011148 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 9.3e-16
Identity = 65/95 (68.42%), Postives = 70/95 (73.68%), Query Frame = 0

Query: 8   SRAFDLATATGGNQ-PTKSEKNSNSKAA-----AAVCSNNMGKALAQRAVYGSQQRRTG- 67
           S AFD A  TGG Q PTK+EKN NSKA+     A   SNN+GKALA+RAVYGSQQRRTG 
Sbjct: 12  SSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGR 71

Query: 68  RRKNLIH---GVRLLPSRLSKVSLAD---NSSGSD 90
           RR+NLIH     RLLPSRLSKVSLAD   NSS SD
Sbjct: 72  RRRNLIHEHGATRLLPSRLSKVSLADHHYNSSPSD 106

BLAST of Spg031929 vs. NCBI nr
Match: KAA0049530.1 (hypothetical protein E6C27_scaffold171G007850 [Cucumis melo var. makuwa] >TYK16208.1 hypothetical protein E5676_scaffold209G001370 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 3.0e-14
Identity = 56/89 (62.92%), Postives = 64/89 (71.91%), Query Frame = 0

Query: 8   SRAFDLATATGGNQPTKSEKNSNSKAAAAVCSNNMGKALAQRAVYGSQQRRTG-RRKNLI 67
           S AFD A+ TGG QP +   NS +  AA   SNNMGKALA+RAVYG+QQRRTG RR+NLI
Sbjct: 12  SSAFDPASTTGGIQPAEKNPNSKAATAATAASNNMGKALAERAVYGTQQRRTGRRRRNLI 71

Query: 68  H---GVRLLPSRLSKVSLAD---NSSGSD 90
           H    +RLLPS LS+VSLAD   NS  SD
Sbjct: 72  HEHGAIRLLPSTLSRVSLADHHYNSPPSD 100

BLAST of Spg031929 vs. NCBI nr
Match: KAG2726969.1 (hypothetical protein I3760_01G138000 [Carya illinoinensis])

HSP 1 Score: 73.6 bits (179), Expect = 9.9e-10
Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 0

Query: 1  MSSEEPNSRAFDLATATGGNQPTKSEKNSNSKAAAAVCSNNMGKALAQRAVYGSQQRRTG 60
          M+SE+ N+   DL   T  NQ T  +K  ++K AA   ++N+GKALAQRA+YGS  RR G
Sbjct: 1  MASEKANANGSDLDARTSSNQATTIDKKPDTKGAA---NSNLGKALAQRALYGSHNRRVG 60

Query: 61 RRKNLIHGVRLLPSRLSKVSLADNSS 87
           RK    G RLLPSRLSKVSL ++S+
Sbjct: 61 GRKITNSGARLLPSRLSKVSLGEDSA 83

BLAST of Spg031929 vs. NCBI nr
Match: KAG6668024.1 (hypothetical protein CIPAW_01G142300 [Carya illinoinensis])

HSP 1 Score: 72.0 bits (175), Expect = 2.9e-09
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 0

Query: 1  MSSEEPNSRAFDLATATGGNQPTKSEKNSNSKAAAAVCSNNMGKALAQRAVYGSQQRRTG 60
          M+SE+ N+   DL   T  NQ T  +K  ++K  A   ++N+GKALAQRA+YGS  RR G
Sbjct: 1  MASEKANANGSDLDARTSSNQATTIDKKPDTKGTA---NSNLGKALAQRALYGSHNRRVG 60

Query: 61 RRKNLIHGVRLLPSRLSKVSLADNSS 87
           RK    G RLLPSRLSKVSL ++S+
Sbjct: 61 GRKVTNSGARLLPSRLSKVSLGEDSA 83

BLAST of Spg031929 vs. ExPASy TrEMBL
Match: A0A0A0L5C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165670 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.5e-16
Identity = 65/95 (68.42%), Postives = 70/95 (73.68%), Query Frame = 0

Query: 8   SRAFDLATATGGNQ-PTKSEKNSNSKAA-----AAVCSNNMGKALAQRAVYGSQQRRTG- 67
           S AFD A  TGG Q PTK+EKN NSKA+     A   SNN+GKALA+RAVYGSQQRRTG 
Sbjct: 12  SSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGR 71

Query: 68  RRKNLIH---GVRLLPSRLSKVSLAD---NSSGSD 90
           RR+NLIH     RLLPSRLSKVSLAD   NSS SD
Sbjct: 72  RRRNLIHEHGATRLLPSRLSKVSLADHHYNSSPSD 106

BLAST of Spg031929 vs. ExPASy TrEMBL
Match: A0A5A7U2I2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001370 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.4e-14
Identity = 56/89 (62.92%), Postives = 64/89 (71.91%), Query Frame = 0

Query: 8   SRAFDLATATGGNQPTKSEKNSNSKAAAAVCSNNMGKALAQRAVYGSQQRRTG-RRKNLI 67
           S AFD A+ TGG QP +   NS +  AA   SNNMGKALA+RAVYG+QQRRTG RR+NLI
Sbjct: 12  SSAFDPASTTGGIQPAEKNPNSKAATAATAASNNMGKALAERAVYGTQQRRTGRRRRNLI 71

Query: 68  H---GVRLLPSRLSKVSLAD---NSSGSD 90
           H    +RLLPS LS+VSLAD   NS  SD
Sbjct: 72  HEHGAIRLLPSTLSRVSLADHHYNSPPSD 100

BLAST of Spg031929 vs. ExPASy TrEMBL
Match: A0A7J7CSF0 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G01191 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 43/86 (50.00%), Postives = 54/86 (62.79%), Query Frame = 0

Query: 1  MSSEEPNSRAFDLATATGGNQPTKSEKNSNSKAAAAVCSNNMGKALAQRAVYGSQQRRTG 60
          M+SE+  ++  +L T+T  NQ   +EK  N K    + +N+ GKALAQRA+YG   RR  
Sbjct: 1  MASEQ--AKTGNLETSTSSNQEIPAEKEPNRK---GITNNSPGKALAQRALYGPHHRRAK 60

Query: 61 RRKNLIHGVRLLPSRLSKVSLADNSS 87
           RK    G R LPSRLSKVSLADN S
Sbjct: 61 GRKVANTGARSLPSRLSKVSLADNPS 81

BLAST of Spg031929 vs. ExPASy TrEMBL
Match: A0A5C7IRA7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_000217 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05
Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 0

Query: 1  MSSEEPNSRAFDLATATGGNQPTKSEKNSNSKAAAAVCSNNMGKALAQRAVYGSQQRRTG 60
          M+SE+ N+R  DL  +T  NQ  +     N+K AA+  ++N+GKALA+RA+ GSQ RR+ 
Sbjct: 6  MASEKGNAR--DLEASTSSNQVIQ----PNTKGAAS--NSNVGKALARRALSGSQNRRSH 65

Query: 61 RRKNLIHGVRLLPSRLSKVSLADNSS 87
           RK    G R+LPSRLSKVSLA+  S
Sbjct: 66 GRKVANSGARMLPSRLSKVSLAEEDS 83

BLAST of Spg031929 vs. ExPASy TrEMBL
Match: A0A5N6RCW1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015479 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.1e-05
Identity = 39/81 (48.15%), Postives = 48/81 (59.26%), Query Frame = 0

Query: 1  MSSEEPNSRAFDLATATGGNQPTKSEKNSNSKAAAAVCSNNMGKALAQRAVYGSQQRRTG 60
          M+S++ N+   D    T  NQ T  +K  N+K  A   +NN+GK LAQRA+YGS   R G
Sbjct: 1  MASDKGNANNID--ACTNSNQSTSLDKKPNTKGGA---NNNLGKTLAQRALYGSHNHRVG 60

Query: 61 RRKNLIHGVRLLPSRLSKVSL 82
           RK      R LPSRLSKVSL
Sbjct: 61 GRKITNSSARSLPSRLSKVSL 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6597562.11.6e-2070.21hypothetical protein SDJN03_10742, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN57150.19.3e-1668.42hypothetical protein Csa_011148 [Cucumis sativus][more]
KAA0049530.13.0e-1462.92hypothetical protein E6C27_scaffold171G007850 [Cucumis melo var. makuwa] >TYK162... [more]
KAG2726969.19.9e-1052.33hypothetical protein I3760_01G138000 [Carya illinoinensis][more]
KAG6668024.12.9e-0951.16hypothetical protein CIPAW_01G142300 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L5C04.5e-1668.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165670 PE=4 SV=1[more]
A0A5A7U2I21.4e-1462.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A7J7CSF05.0e-0750.00Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G01191 ... [more]
A0A5C7IRA71.2e-0550.00Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_000217 PE=4 SV=1[more]
A0A5N6RCW12.1e-0548.15Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015479 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg031929.1Spg031929.1mRNA