Spg031870 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg031870
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S acidic ribosomal protein P1-like
Location	scaffold11: 44713266 .. 44714604 (-)
RNA-Seq Expression	Spg031870
Synteny	Spg031870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGGAGTGTTTGAAACCCTAGAACGCTTCCGTGTTGCGCAGCGAAGAACAGACTGTTTTGAGCCTCCGCCATCGCCCATTTCTTCTGGTCTGATATCTCTCTCCCTCAATCTTCAACTGTTATTCTTAATTTATTTTTCTCTAATGAATTCATTTTCTGGTGCTTCATGATATGTGTTGTCTTTCTGCTTTTCTTTTTCCGTAATTTTGCTCGCTTGTGAACGTGCAGCGAAAAATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCCCTGATCCTTTACGACGACAACATCCCTGTTACCGTATTCTTCTTCTCTTAAATCCTGTCATCCTTAATATTTAAATTCTTTCTTCGTAGTTACTTTTGGGATCTCGTTTACCAATTTCAAACTACTTAGTAGGGAGATTGTCGTGTTTTGTTCAAAGTGATTGGTGTAAGTATTAGTAATATCGACATTTCGCATGATTCCCATTTCAAATAGATAAAATACGAAACGTGGAGTATCATACTCTTGTTCGGTCTTTGACTTTTTTTCTTCATATATATTTATGAAACAATGCTTAAAAGCTAGATCTTGTTCTTCTTTTATTACTACTTTTCTGGTATGTTTATGCAATTTGTTCCAATTTGTGATTATTGTTTTTGCTTATGAACTTCTGTGATAACGTTTGCTATATGATTTGTATGGGAATAAGATTCGAAAATGTGCTTTCTTAAACAGTCAGAGAAGCTTGCCACGCTTGTTAACGCAGCTAAGGTGCCCAATGTGGAGTCCTACTGGTTCGGCCTTTTCACTAAGCTGGCTGAGAAGCGTAACATTGGGGATTTGATCCTGAATGTTGGGGCCGGTGGAGGTGCCCCAGCCGCTGCTGCTGCCCCAGTTGGTGGAGCTGCGGGTGGGGCTGCTGCCGCAGCTGCTCCTCCGCCAGAAGAGAAAAAGGTAAGCAATGGCCATTTCATTTCTAAGAATGACATTGTTGTCTTTCTTTCTTATCATGAGAGCTTGGTTTGGAGGCAGTTAATGTTCATCACCGTTACATGTGTTTATTTTTGTTACTTGCAGGAAGAACCAAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAAGTCAATATGGCTTTGCATATTTTGTACTAGGTTGATTATCTTTTAAATTCCAGAGGGCTCTCTTGTTATCTTACAGATATGTAATCTTGGACATCCGTGACAAAAGTTTTGATTTGAATATGATCTGATTGCGTCTTTTTGTTTGAGATATTTCTATATTACATGTCTTGTGTTCCCTCATTACGCTAGGTATAATATGTTGTCGAAGATTGTTTTTTC

mRNA sequence

ATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCCCTGATCCTTTACGACGACAACATCCCTGTTACCTCAGAGAAGCTTGCCACGCTTGTTAACGCAGCTAAGGTGCCCAATGTGGAGTCCTACTGGTTCGGCCTTTTCACTAAGCTGGCTGAGAAGCGTAACATTGGGGATTTGATCCTGAATGTTGGGGCCGGTGGAGGTGCCCCAGCCGCTGCTGCTGCCCCAGTTGGTGGAGCTGCGGGTGGGGCTGCTGCCGCAGCTGCTCCTCCGCCAGAAGAGAAAAAGGAAGAACCAAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAA

Coding sequence (CDS)

ATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCCCTGATCCTTTACGACGACAACATCCCTGTTACCTCAGAGAAGCTTGCCACGCTTGTTAACGCAGCTAAGGTGCCCAATGTGGAGTCCTACTGGTTCGGCCTTTTCACTAAGCTGGCTGAGAAGCGTAACATTGGGGATTTGATCCTGAATGTTGGGGCCGGTGGAGGTGCCCCAGCCGCTGCTGCTGCCCCAGTTGGTGGAGCTGCGGGTGGGGCTGCTGCCGCAGCTGCTCCTCCGCCAGAAGAGAAAAAGGAAGAACCAAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAA

Protein sequence

MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD

Homology

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BLAST of Spg031870 vs. NCBI nr
Match: XP_004133766.1 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical protein Csa_009966 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 9.3e-45
Identity = 100/113 (88.50%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIP+T+EK+ATLV AAKV +VESYW+GLF KLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGA  AAAAP GGAAGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Spg031870 vs. NCBI nr
Match: XP_038883955.1 (60S acidic ribosomal protein P1-like [Benincasa hispida])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIP+T+EK+AT+V AA VP+VESYWFGLF KLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATIVKAANVPDVESYWFGLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGA  AAA P  G AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPASGVAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

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BLAST of Spg031870 vs. NCBI nr
Match: XP_008437779.1 (PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa] >TYK20773.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 6.6e-43
Identity = 97/113 (85.84%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIP+T+EK+ATLV AA V +VESYW+ LF KLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGA  AAA P GGAA G AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Spg031870 vs. NCBI nr
Match: XP_022980127.1 (60S acidic ribosomal protein P1-like [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 5.6e-42
Identity = 100/113 (88.50%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MS GEIACSYA+LIL DD IP+T+EKLATLVNAAKV NVESYWF LF KLAEKRNI DLI
Sbjct: 1   MSIGEIACSYASLILCDDGIPITAEKLATLVNAAKVDNVESYWFNLFAKLAEKRNIEDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGA A AAAP GGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGA-AVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 112

[Close]

BLAST of Spg031870 vs. NCBI nr
Match: XP_023528725.1 (60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo] >KAG7020683.1 60S acidic ribosomal protein P1-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 98/113 (86.73%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MS GEIACSYA+LIL DD IP+T+EKLATLV AAKV  VESYWF LF KLAEKRNI DLI
Sbjct: 1   MSIGEIACSYASLILCDDGIPITAEKLATLVKAAKVDKVESYWFSLFAKLAEKRNIEDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGA A AAAP GGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGA-AVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 112

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BLAST of Spg031870 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-31
Identity = 81/114 (71.05%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           M++GE+AC YAALIL DD I +T+EK+AT+V AA +  VESYW  LF KL EKRN+ DLI
Sbjct: 1   MASGELACRYAALILSDDGIAITAEKIATIVKAANI-KVESYWPALFAKLLEKRNVEDLI 60

Query: 61  LNVGAGGG-APAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           L+VG+GGG AP AAAAP    AGGAAAAAAP  EEKKEE KEESDDDMGFSLFD
Sbjct: 61  LSVGSGGGAAPVAAAAP----AGGAAAAAAPAVEEKKEEAKEESDDDMGFSLFD 109

[Close]

BLAST of Spg031870 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-28
Identity = 77/117 (65.81%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I +TS+K+ATLV AA V  +ESYW  LF K+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGV-EIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA---GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA   GGGAP +AAAP   AA G AAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAP---AAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Spg031870 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-27
Identity = 78/117 (66.67%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I +T++K+ATLV AA V  +ESYW  LF K+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-TIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEE-KKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGAP AAAAP   AAGG AAAAAP  EE KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Spg031870 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 5.3e-27
Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I +T++K+ATLV AA V ++ESYW  LF K+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-SIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGAP AAAAP   AAGG AAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]

BLAST of Spg031870 vs. ExPASy Swiss-Prot
Match: Q9HGV0 (60S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_1G06830 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-25
Identity = 71/114 (62.28%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MST E+ACSYAALIL DD + +T++K+ TL+ AAKV +VE  W  LF K  E ++I DL+
Sbjct: 1   MSTAELACSYAALILADDGVEITADKIQTLLGAAKVADVEPIWTSLFAKALEGKDIKDLL 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAA-AAAPPPEEKKEEPKEESDDDMGFSLFD 114
            NVG+GG   AAA A VGGAA GAAA A A   EEKKEE KEESD+DMGF LFD
Sbjct: 61  TNVGSGG---AAAPAAVGGAAAGAAAPAEAAAAEEKKEEEKEESDEDMGFGLFD 111

[Close]

BLAST of Spg031870 vs. ExPASy TrEMBL
Match: A0A0A0L5M7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.5e-45
Identity = 100/113 (88.50%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIP+T+EK+ATLV AAKV +VESYW+GLF KLAEKR+IGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAAKVSDVESYWYGLFAKLAEKRSIGDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGA  AAAAP GGAAGG AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAAPAGGAAGGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Spg031870 vs. ExPASy TrEMBL
Match: A0A5D3DB57 (60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00330 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.2e-43
Identity = 97/113 (85.84%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIP+T+EK+ATLV AA V +VESYW+ LF KLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGA  AAA P GGAA G AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Spg031870 vs. ExPASy TrEMBL
Match: A0A1S3AUG9 (60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.2e-43
Identity = 97/113 (85.84%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MSTGEIACSYAALILYDDNIP+T+EK+ATLV AA V +VESYW+ LF KLAEKRNIGDLI
Sbjct: 1   MSTGEIACSYAALILYDDNIPITAEKIATLVKAANVSDVESYWYSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGA  AAA P GGAA G AAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGAAVAAAVPAGGAAAGGAAAAAPPPEEKKEEPKEESDDDMGFSLFD 113

[Close]

BLAST of Spg031870 vs. ExPASy TrEMBL
Match: A0A6J1IQJ8 (60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111479609 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-42
Identity = 100/113 (88.50%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MS GEIACSYA+LIL DD IP+T+EKLATLVNAAKV NVESYWF LF KLAEKRNI DLI
Sbjct: 1   MSIGEIACSYASLILCDDGIPITAEKLATLVNAAKVDNVESYWFNLFAKLAEKRNIEDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           LNVGAGGGA A AAAP GGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  LNVGAGGGA-AVAAAPAGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 112

[Close]

BLAST of Spg031870 vs. ExPASy TrEMBL
Match: A0A6J1ICK4 (60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.5e-40
Identity = 98/113 (86.73%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 1   MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLI 60
           MS GEIACSYAALILYDDNIPVT+EKLATLV AA V + ESYWF LF KLAEKRNIGDLI
Sbjct: 1   MSVGEIACSYAALILYDDNIPVTAEKLATLVKAAGV-DAESYWFSLFAKLAEKRNIGDLI 60

Query: 61  LNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           +NVGAGGGA  AAA P GG AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD
Sbjct: 61  MNVGAGGGAAVAAAVPAGG-AGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 111

[Close]

BLAST of Spg031870 vs. TAIR 10
Match: AT4G00810.1 (60S acidic ribosomal protein family )

HSP 1 Score: 125.2 bits (313), Expect = 3.4e-29
Identity = 77/117 (65.81%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I +TS+K+ATLV AA V  +ESYW  LF K+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGV-EIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA---GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA   GGGAP +AAAP   AA G AAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAP---AAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Spg031870 vs. TAIR 10
Match: AT4G00810.2 (60S acidic ribosomal protein family )

HSP 1 Score: 125.2 bits (313), Expect = 3.4e-29
Identity = 77/117 (65.81%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I +TS+K+ATLV AA V  +ESYW  LF K+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGV-EIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA---GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA   GGGAP +AAAP   AA G AAAAAP  EEKK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGGAPVSAAAP---AAAGGAAAAAPAKEEKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Spg031870 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 123.2 bits (308), Expect = 1.3e-28
Identity = 78/117 (66.67%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I +T++K+ATLV AA V  +ESYW  LF K+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-TIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEE-KKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGAP AAAAP   AAGG AAAAAP  EE KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Spg031870 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 123.2 bits (308), Expect = 1.3e-28
Identity = 78/117 (66.67%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I +T++K+ATLV AA V  +ESYW  LF K+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-TIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEE-KKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGAP AAAAP   AAGG AAAAAP  EE KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]

BLAST of Spg031870 vs. TAIR 10
Match: AT1G01100.1 (60S acidic ribosomal protein family )

HSP 1 Score: 121.7 bits (304), Expect = 3.8e-28
Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 1   MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDL 60
           MST GE+ACSYA +IL D+ I +T++K+ATLV AA V ++ESYW  LF K+AEKRN+ DL
Sbjct: 1   MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGV-SIESYWPMLFAKMAEKRNVTDL 60

Query: 61  ILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD 114
           I+NVGA  GGGAP AAAAP   AAGG AAAA    E+KK+EP EESD D+GF LFD
Sbjct: 61  IMNVGAGGGGGAPVAAAAP---AAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

The following BLAST results are available for this feature:

BLAST of Spg031870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133766.1	9.3e-45	88.50	60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical prote...	[more]
XP_038883955.1	1.2e-44	87.61	60S acidic ribosomal protein P1-like [Benincasa hispida]	[more]
XP_008437779.1	6.6e-43	85.84	PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S...	[more]
XP_022980127.1	5.6e-42	88.50	60S acidic ribosomal protein P1-like [Cucurbita maxima]	[more]
XP_023528725.1	1.4e-40	86.73	60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo] >KAG7020683.1 ...	[more]

BLAST of Spg031870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52855	2.1e-31	71.05	60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1	[more]
O23095	4.8e-28	65.81	60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ...	[more]
Q8LEQ0	1.8e-27	66.67	60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ...	[more]
Q8LCW9	5.3e-27	64.66	60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ...	[more]
Q9HGV0	1.0e-25	62.28	60S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / ...	[more]

BLAST of Spg031870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5M7	4.5e-45	88.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116860 PE=3 SV=1	[more]
A0A5D3DB57	3.2e-43	85.84	60S acidic ribosomal protein P1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3AUG9	3.2e-43	85.84	60S acidic ribosomal protein P1-like OS=Cucumis melo OX=3656 GN=LOC103483111 PE=...	[more]
A0A6J1IQJ8	2.7e-42	88.50	60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111479609...	[more]
A0A6J1ICK4	1.5e-40	86.73	60S acidic ribosomal protein P1-like OS=Cucurbita maxima OX=3661 GN=LOC111474378...	[more]

BLAST of Spg031870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00810.1	3.4e-29	65.81	60S acidic ribosomal protein family	[more]
AT4G00810.2	3.4e-29	65.81	60S acidic ribosomal protein family	[more]
AT5G47700.1	1.3e-28	66.67	60S acidic ribosomal protein family	[more]
AT5G47700.2	1.3e-28	66.67	60S acidic ribosomal protein family	[more]
AT1G01100.1	3.8e-28	64.66	60S acidic ribosomal protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038716	Ribosomal protein P1/P2, N-terminal domain	GENE3D	1.10.10.1410		coord: 1..64 e-value: 7.3E-28 score: 98.2
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 22..112 e-value: 2.5E-23 score: 82.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..107
None	No IPR available	PANTHER	PTHR45696:SF22	60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED	coord: 1..113
None	No IPR available	PANTHER	PTHR45696	60S ACIDIC RIBOSOMAL PROTEIN P1	coord: 1..113
None	No IPR available	CDD	cd05831	Ribosomal_P1	coord: 5..112 e-value: 4.12721E-23 score: 83.9103
IPR027534	Ribosomal protein L12/P1/P2 family	HAMAP	MF_01478	Ribosomal_L12_arch	coord: 6..113 score: 14.252887

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg031870.1	Spg031870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032147	activation of protein kinase activity
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0030295	protein kinase activator activity
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0003735	structural constituent of ribosome