Spg031523 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg031523
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold11: 38499707 .. 38502490 (+)
RNA-Seq Expression	Spg031523
Synteny	Spg031523

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGAGGAAGCAGAGAAATGGAGTCTGCTTTTGCCGTGGCTCGAAGATTTTCGTCCACAGCGATGAGAGAATCCGTGTCTGGAAATGGGCGGGAACAGTCGGATATTGAAATTGCAAAAAATAAAAAATAATAATAATTTGATTTAAAATAAAAACTGAACGTTAAATTTTTTTAGTGGATGACGTGGCAGTGTAGTACGTTCAAAATTTTAAAACGGTCATGTGACTGGCAGGTGGCCTCTATTTCGACCGTTAATGCCGTCTTTTTGCTTCATGTAATAATTTGCATTTTTTTTTAGGACCGTAATAATTTGCATCTAGATTGATAATTTATTTACGTTTAAATACAACTTTAGCCTATTTCAAAAAAAAAAAAAAATACAACTTTAGTCCCCATCAAAAATAAAAAATAAAAAAATACTACTTTAGTCATTGTATTTCAGTCCCTATGTTTTTTAAATATTCATTGTGTTTCATGTATTTTGGACTTTAGTTCGTTTTGGTTTTTGTATTTTAAAATATTCATTTTGGTCATTGTACTTTTAAAAAGTAACAAACGTAGTTTCTATTTGTAAATTTTATACACAATGGAAAACCCTTCAATCACGTTTTTTACTACATTTCAATAAATTTAGTGATCGAAATGTCATGCTAAAATCGTGATGGAAAAATGAGAAAGTTTGAAAAAAAAGTACATTGATTGAAATTAACATTTTGAAAGTACATGACTAAAATGAACCAAAGTGAAAGTACATGACATGTACTTTTAACCAATAGGTCAGATGTTTGAATCCTTCATCCCAGATATTGCGAACAAAAGAAGAAGAAGAAAAATTTAAGATTTATTGTGTTTTAAATTCGTTCTCCAATTTAAAAGGTCATGTTTTGTTTCTTCCAGTTTTATCCATTGAGCTTCAAACTTAACCATTCTCGTTTAAAAACAAAACTCTATATTTTAAATTTTATTTATAATTTGTAGATTATTATCAAGCATCGAGAAAATGTTTTAAACGCTTTTTTTTTTTTTGTCATATTTGTCATTGGGTACAAATTATCTCATACGTGTGAGACTAATCATATGCCACGACATAGTTGACTCGAGATGGGCTAAATTTCAAACAACATTGATTACCTTAATAAATGTGACATTGTTCAGGATATTGTTATGGGTAATTCTGGACCATTCTGGAATATGAGGAACAAACAAGGACAACGCAACACCAACCCAAGGACACGATCAGGAAGTGGACCCCAGAGGAGAGGTAGGCCAAAAGAAATTGGGTCGAGGCCGAGTTTTTCCGCCTCCGTTAGGTCCCTGGTGCCCCGAGACGCCCCGGTTCCACCTGGTTTAGCCTAAATCATCTCCGAAAGCCTAGAAAGCCTAGGGCTAGAAAAGGTATTTAAACCTTTTTTCGCCATGGGAGAAGGGATCTGAAAACTATTGTCGACTCTCTTGCTCTTGCTCTCTACTTGCTTCCCATCTTACTTCTTGTTGACTTAAGCATCAGAGGCGGTGTGGCAAGCACCACACCGGTGTGTAGTTTTCCCTGTCTTGCAGGCCACGTCTTCCCCCTCTCATACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTCCTCCCGACCAAAGTTGACCATCAACAGTTGGCACCGTCTGTGGAGAAGAAAGTTTGCTAGTTGAATCTGCGCATCGGTTGTTCAATGAGTAAGAGGATGGAAAAGGGAAACCGAAATCCAAGCCCATAAACTTCGAAAAATAACCGTCAACCGCAGAAGTCACGAGACGATGATAACATCCAAAGGTTACCGAGACGAACAGGTTAGGGAGCCGAGGCCGAGGAGAAGAAGTTGACGCCAAAATTGTTGCCCTTGAGGATAAGGTGAGGGGAATGGATCAGAGTTTGTCCAAGATACTTAAATTTTGGATAAACCTGGTCCTAGCACCAAATTCCGAGAGGAAGGCTTGATTAGAGACCCAAGGAAGGGGAAGGAGCCAGTCGAGCACGTGGAAGAGTCGAAGACAAGACCAAAGGGAAAAGAGACCAACAGCGCAACCAGTAAGGTCAGGGGGCTGAAGATTGCAGAACGCACAATTCTGAGGAGTCCAGAACCAAGTACCAGTCGTAGAACAGACTTGAGAAACCTGATTGAAGAGAAACGCAAAATGGCCAGAGTTGTCGAGGCTGAGGCCGAGACTAGATTGGCCGAGGCCGGGGCCAAAAAGGACAATCTCCCTTGAAAGACTGAGCTTCTGAACACGCTAAAAGAGCTCGGAAATCCTCGGGGAGACCTGCAGAAGTCAAAGGACCCTAGAGAACAAGACTTGGAAAAACTGATCGATCAAGTCGACCTGTCCTTCACGGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTAAAACCGTATGATGGCAGGAAAGACCTCGTGCAACATCTAAACGCCTACAAAAACTGGATGGACTTCCACGACGTCTCAGATGCAATCAGGTGTCGCACATTCTTTTTCACTCTGACAGGATCAGCCAAGCATTGGTTTGAAAGGTTGAAAAAGAGATCAATCAACTCTTTAAAGGAATTAGCCCGAGCGTTCCTCGCTCAGTTTATGGGAGCCAGAGAACATCGCAAGCCTCACATCAACCTCTTAACCGTCAAACAGCAGCCAGGTAAGAGCTTGCGCGATTATATAACACGTTTTAACGAGGAAGCGCTGCAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAAGAGGA

mRNA sequence

ATGGCGGAGAGGAAGCAGAGAAATGGAGTCTGCTTTTGCCGTGGCTCGAAGATTTTCGTCCACAGCGATGAGAGAATCCGTGTCTGGAAATGGGCGGGAACAGATATTGTTATGGGTAATTCTGGACCATTCTGGAATATGAGGAACAAACAAGGACAACGCAACACCAACCCAAGGACACGATCAGGAAGTGGACCCCAGAGGAGAGCATCAGAGGCGGTGTGGCAAGCACCACACCGGTGTGTAGTTTTCCCTGTCTTGCAGGCCACGTCTTCCCCCTCTCATACAAATTTACCGTTGGTGGCACGTGAAGGTCAGACGAACAGGTTAGGGAGCCGAGGCCGAGGAGAAGAAGTTGACGCCAAAATTGTTGCCCTTGAGGATAAGGAAGGCTTGATTAGAGACCCAAGGAAGGGGAAGGAGCCAGTCGAGCACGTGGAAGAGTCGAAGACAAGACCAAAGGGAAAAGAGACCAACAGCGCAACCAGTAAGGTCAGGGGGCTGAAGATTGCAGAACGCACAATTCTGAGGAGTCCAGAACCAAAGCTCGGAAATCCTCGGGGAGACCTGCAGAAGTCAAAGGACCCTAGAGAACAAGACTTGGAAAAACTGATCGATCAAGTCGACCTGTCCTTCACGGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTAAAACCGTATGATGGCAGGAAAGACCTCGTGCAACATCTAAACGCCTACAAAAACTGGATGGACTTCCACGACGTCTCAGATGCAATCAGGTGTCGCACATTCTTTTTCACTCTGACAGGATCAGCCAAGCATTGGTTTGAAAGGTTGAAAAAGAGATCAATCAACTCTTTAAAGGAATTAGCCCGAGCGTTCCTCGCTCAGTTTATGGGAGCCAGAGAACATCGCAAGCCTCACATCAACCTCTTAACCGTCAAACAGCAGCCAGGTAAGAGCTTGCGCGATTATATAACACGTTTTAACGAGGAAGCGCTGCAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAAGAGGA

Coding sequence (CDS)

ATGGCGGAGAGGAAGCAGAGAAATGGAGTCTGCTTTTGCCGTGGCTCGAAGATTTTCGTCCACAGCGATGAGAGAATCCGTGTCTGGAAATGGGCGGGAACAGATATTGTTATGGGTAATTCTGGACCATTCTGGAATATGAGGAACAAACAAGGACAACGCAACACCAACCCAAGGACACGATCAGGAAGTGGACCCCAGAGGAGAGCATCAGAGGCGGTGTGGCAAGCACCACACCGGTGTGTAGTTTTCCCTGTCTTGCAGGCCACGTCTTCCCCCTCTCATACAAATTTACCGTTGGTGGCACGTGAAGGTCAGACGAACAGGTTAGGGAGCCGAGGCCGAGGAGAAGAAGTTGACGCCAAAATTGTTGCCCTTGAGGATAAGGAAGGCTTGATTAGAGACCCAAGGAAGGGGAAGGAGCCAGTCGAGCACGTGGAAGAGTCGAAGACAAGACCAAAGGGAAAAGAGACCAACAGCGCAACCAGTAAGGTCAGGGGGCTGAAGATTGCAGAACGCACAATTCTGAGGAGTCCAGAACCAAAGCTCGGAAATCCTCGGGGAGACCTGCAGAAGTCAAAGGACCCTAGAGAACAAGACTTGGAAAAACTGATCGATCAAGTCGACCTGTCCTTCACGGAAGAAGTCATGAAAGCTGAGGTGCCCCAGAAGTTCAAGGTACCTACATTAAAACCGTATGATGGCAGGAAAGACCTCGTGCAACATCTAAACGCCTACAAAAACTGGATGGACTTCCACGACGTCTCAGATGCAATCAGGTGTCGCACATTCTTTTTCACTCTGACAGGATCAGCCAAGCATTGGTTTGAAAGGTTGAAAAAGAGATCAATCAACTCTTTAAAGGAATTAGCCCGAGCGTTCCTCGCTCAGTTTATGGGAGCCAGAGAACATCGCAAGCCTCACATCAACCTCTTAACCGTCAAACAGCAGCCAGGTAAGAGCTTGCGCGATTATATAACACGTTTTAACGAGGAAGCGCTGCAGGTTGAGGGATACAGTGAGGGAGCAACCCTAGTAGCCATCACAAGAGGA

Protein sequence

MAERKQRNGVCFCRGSKIFVHSDERIRVWKWAGTDIVMGNSGPFWNMRNKQGQRNTNPRTRSGSGPQRRASEAVWQAPHRCVVFPVLQATSSPSHTNLPLVAREGQTNRLGSRGRGEEVDAKIVALEDKEGLIRDPRKGKEPVEHVEESKTRPKGKETNSATSKVRGLKIAERTILRSPEPKLGNPRGDLQKSKDPREQDLEKLIDQVDLSFTEEVMKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAIRCRTFFFTLTGSAKHWFERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPGKSLRDYITRFNEEALQVEGYSEGATLVAITRG

Homology

[Close]

BLAST of Spg031523 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 185.7 bits (470), Expect = 7.1e-43
Identity = 115/272 (42.28%), Postives = 153/272 (56.25%), Query Frame = 0


Query: 117 EEVDAKIVALEDKEG----LIRDPRKGKEPVEHVEESKTRPKGKETNSATSKVR-GLKIA 176
           E    +   LEDKE     L+RDP+KGK P E   E       + TNS  SK+R G    
Sbjct: 55  EPFQKQFAVLEDKESDEVPLVRDPKKGKGPTESDTE-------ESTNSVGSKLRIGGNTR 114

Query: 177 ERTIL----------RSPEPKLG----------------NPRGDLQKSKDPREQ------ 236
           +RT +          +SP P  G                    D  +S + R        
Sbjct: 115 QRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGF 174

Query: 237 DLEKLIDQVDLSFTEEVMKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAI 296
           DLE+L+DQ D  FTEE+M+ +VP KFK+PT+K +D   D V HL+AY+ WMD + VS+A+
Sbjct: 175 DLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAV 234

Query: 297 RCRTFFFTLTGSAKHWFERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPG 352
           RCR F  TL GSA+ WF +LK+ SI+S K LARAF+ QF+G R   +P   LLT+KQ+  
Sbjct: 235 RCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTT 294

[Close]

BLAST of Spg031523 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 176.4 bits (446), Expect = 4.3e-40
Identity = 83/152 (54.61%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 200 DLEKLIDQVDLSFTEEVMKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAI 259
           DLE+L+ Q D  FTEE+M+ +VP KFK+PT+KP+DG  + V HL+AY+ WMD + VSDAI
Sbjct: 73  DLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAI 132

Query: 260 RCRTFFFTLTGSAKHWFERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPG 319
           RCR F  TL GSA+ WF +LK+ SI+S K LARAF+ QF+G R   +P   LLT+KQ+  
Sbjct: 133 RCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTA 192

Query: 320 KSLRDYITRFNEEALQVEGYSEGATLVAITRG 352
           +SL DY+ RFNEE LQ+EG ++  +L+A   G
Sbjct: 193 ESLHDYVARFNEEKLQLEGLTDAVSLLAFMSG 224

[Close]

BLAST of Spg031523 vs. NCBI nr
Match: XP_022150035.1 (uncharacterized protein LOC111018307 [Momordica charantia])

HSP 1 Score: 159.1 bits (401), Expect = 7.1e-35
Identity = 73/134 (54.48%), Postives = 100/134 (74.63%), Query Frame = 0


Query: 214 EEVMKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAIRCRTFFFTLTGSAK 273
           EE+MK +VP KFK+PT+K +DG  DLV HL+AY+ WMD + VS+A++CR F  TL+GSA+
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 274 HWFERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPGKSLRDYITRFNEEA 333
            WF +LK+ SI+S K LA+AF+ QF+G R   +P   LLT+KQ+  +SL DY+ RFNEE 
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

Query: 334 LQVEGYSEGATLVA 348
           LQVEG +   +L+A
Sbjct: 122 LQVEGLTNAVSLMA 135

[Close]

BLAST of Spg031523 vs. NCBI nr
Match: XP_022158344.1 (uncharacterized protein LOC111024851 [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 2.3e-33
Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 217 MKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAIRCRTFFFTLTGSAKHWF 276
           MK +   KFK+P +  YDG  D + HL+AY+ W D +D+ +AIRCR F FTLTGSA++WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 277 ERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPGKSLRDYITRFNEEALQV 336
            +LK+ SI+S KELA AF+ QF+G R   KP   LLT+KQ+  +SL++Y+ RFNEE LQV
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 337 EGYSEGATLVAITRG 352
           EG ++   L+A   G
Sbjct: 121 EGLTDAVALIAFVSG 135

[Close]

BLAST of Spg031523 vs. NCBI nr
Match: XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia])

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-32
Identity = 68/135 (50.37%), Postives = 94/135 (69.63%), Query Frame = 0


Query: 217 MKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAIRCRTFFFTLTGSAKHWF 276
           MK +VP KFK+P +K YDG  D + HL+ Y  W D + +++AIRCR F FTLTGS + WF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 277 ERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPGKSLRDYITRFNEEALQV 336
           ++LK++SI+S KELARAF+ QF G     +P   LLT+KQ+  +SL+DY+ RFN+E LQV
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 337 EGYSEGATLVAITRG 352
           EG ++   L+    G
Sbjct: 121 EGLTDAVVLLVFISG 135

[Close]

BLAST of Spg031523 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.4e-43
Identity = 115/272 (42.28%), Postives = 153/272 (56.25%), Query Frame = 0


Query: 117 EEVDAKIVALEDKEG----LIRDPRKGKEPVEHVEESKTRPKGKETNSATSKVR-GLKIA 176
           E    +   LEDKE     L+RDP+KGK P E   E       + TNS  SK+R G    
Sbjct: 55  EPFQKQFAVLEDKESDEVPLVRDPKKGKGPTESDTE-------ESTNSVGSKLRIGGNTR 114

Query: 177 ERTIL----------RSPEPKLG----------------NPRGDLQKSKDPREQ------ 236
           +RT +          +SP P  G                    D  +S + R        
Sbjct: 115 QRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGF 174

Query: 237 DLEKLIDQVDLSFTEEVMKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAI 296
           DLE+L+DQ D  FTEE+M+ +VP KFK+PT+K +D   D V HL+AY+ WMD + VS+A+
Sbjct: 175 DLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAV 234

Query: 297 RCRTFFFTLTGSAKHWFERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPG 352
           RCR F  TL GSA+ WF +LK+ SI+S K LARAF+ QF+G R   +P   LLT+KQ+  
Sbjct: 235 RCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTT 294

[Close]

BLAST of Spg031523 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.1e-40
Identity = 83/152 (54.61%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 200 DLEKLIDQVDLSFTEEVMKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAI 259
           DLE+L+ Q D  FTEE+M+ +VP KFK+PT+KP+DG  + V HL+AY+ WMD + VSDAI
Sbjct: 73  DLEELLGQADSPFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAI 132

Query: 260 RCRTFFFTLTGSAKHWFERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPG 319
           RCR F  TL GSA+ WF +LK+ SI+S K LARAF+ QF+G R   +P   LLT+KQ+  
Sbjct: 133 RCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTA 192

Query: 320 KSLRDYITRFNEEALQVEGYSEGATLVAITRG 352
           +SL DY+ RFNEE LQ+EG ++  +L+A   G
Sbjct: 193 ESLHDYVARFNEEKLQLEGLTDAVSLLAFMSG 224

[Close]

BLAST of Spg031523 vs. ExPASy TrEMBL
Match: A0A6J1D7D2 (uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018307 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.4e-35
Identity = 73/134 (54.48%), Postives = 100/134 (74.63%), Query Frame = 0


Query: 214 EEVMKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAIRCRTFFFTLTGSAK 273
           EE+MK +VP KFK+PT+K +DG  DLV HL+AY+ WMD + VS+A++CR F  TL+GSA+
Sbjct: 2   EEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSAR 61

Query: 274 HWFERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPGKSLRDYITRFNEEA 333
            WF +LK+ SI+S K LA+AF+ QF+G R   +P   LLT+KQ+  +SL DY+ RFNEE 
Sbjct: 62  VWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNEEK 121

Query: 334 LQVEGYSEGATLVA 348
           LQVEG +   +L+A
Sbjct: 122 LQVEGLTNAVSLMA 135

[Close]

BLAST of Spg031523 vs. ExPASy TrEMBL
Match: A0A6J1DZ49 (uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024851 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-33
Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 217 MKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAIRCRTFFFTLTGSAKHWF 276
           MK +   KFK+P +  YDG  D + HL+AY+ W D +D+ +AIRCR F FTLTGSA++WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 277 ERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPGKSLRDYITRFNEEALQV 336
            +LK+ SI+S KELA AF+ QF+G R   KP   LLT+KQ+  +SL++Y+ RFNEE LQV
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQKATESLKEYVARFNEEKLQV 120

Query: 337 EGYSEGATLVAITRG 352
           EG ++   L+A   G
Sbjct: 121 EGLTDAVALIAFVSG 135

[Close]

BLAST of Spg031523 vs. ExPASy TrEMBL
Match: A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-32
Identity = 68/135 (50.37%), Postives = 94/135 (69.63%), Query Frame = 0


Query: 217 MKAEVPQKFKVPTLKPYDGRKDLVQHLNAYKNWMDFHDVSDAIRCRTFFFTLTGSAKHWF 276
           MK +VP KFK+P +K YDG  D + HL+ Y  W D + +++AIRCR F FTLTGS + WF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 277 ERLKKRSINSLKELARAFLAQFMGAREHRKPHINLLTVKQQPGKSLRDYITRFNEEALQV 336
           ++LK++SI+S KELARAF+ QF G     +P   LLT+KQ+  +SL+DY+ RFN+E LQV
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQV 120

Query: 337 EGYSEGATLVAITRG 352
           EG ++   L+    G
Sbjct: 121 EGLTDAVVLLVFISG 135

The following BLAST results are available for this feature:

BLAST of Spg031523 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	7.1e-43	42.28	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159109.1	4.3e-40	54.61	uncharacterized protein LOC111025548 [Momordica charantia]	[more]
XP_022150035.1	7.1e-35	54.48	uncharacterized protein LOC111018307 [Momordica charantia]	[more]
XP_022158344.1	2.3e-33	51.85	uncharacterized protein LOC111024851 [Momordica charantia]	[more]
XP_022147761.1	2.5e-32	50.37	uncharacterized protein LOC111016619 [Momordica charantia]	[more]

BLAST of Spg031523 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg031523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	3.4e-43	42.28	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1E1E7	2.1e-40	54.61	uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D7D2	3.4e-35	54.48	uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DZ49	1.1e-33	51.85	uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1D3B7	1.2e-32	50.37	uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of Spg031523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 264..351 e-value: 4.4E-13 score: 49.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg031523.1	Spg031523.1	mRNA