Spg031225 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg031225
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic
Location	scaffold8: 30112684 .. 30114788 (-)
RNA-Seq Expression	Spg031225
Synteny	Spg031225

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAAGCAGCTCCTCGCGCTGAGCCTGAGCCAAACGCACGCAGCAGCGTGCTATGGGGCAGCATCCACACGCTGAACGAACAACCTCCTCTCGCAAACCGCAGAACCCCAATTCACAACCACAAAAATAAACGAAAAACAAACCCCCCCAATCCAAAAAAATCGAGATAATCCGACTCAAAATCCCACGAAAGGCTCACAACAATCCACGCAGCGGCAGATCTTTTTCCAAAACCCCAAATCTCCAATGGGCTGCACCCATTTTTCTTCTCCGAGAAGCACTGCAATCGGAGAAGAGACAAGTAGATGCTCAGGCTGAATGTTTACTGCAGCAGTTGCTGCTCTCTGATTCGGAACGGCAGAGATGTGAGGACCGACTTCGGATTTGCGCCGTCGCTGGTGATCCGATTGAGGCGAAATCGGAGGCTGAATCGAGGGGTTCTGGCGAAGGCCTTGAAGGATGATCAGACCGACGGCGCCGGCGGCAGATTCTCCGGGCAGAAATGGGACCCTGGCTTGGAAATCGAAGTCCCTTTTGAACAACGGCCGGTATGGATTGGTTGTATTAGTATAATTTATTGATCATTGATGCTGTTTCTCTTTTTCGTATTTCCATAAGCATGTTCATTATTCTTTGCGAATTTCGGAGAGATGAAACATTCTTCTGTTTCATGTTGGGATAAACATTGTCAAAATTCTAAAACAATTGTCATGGGAAAGAGTGACAGATGAAAAGTAGGATGAATATGAATAACAATAGTATTCCTACTTCTGTAAAGTGCTTAAAACCACTGGTTTAGATTCAGACTAGGTTCATTTTGATAACTAATATTATTTAAACCTTAATAAAGAAGTAGTTTTCAAATTTTATTTAATATTGTAGAACATAGCCATCAACTAGTGATTAATATAACTCTAGTTTATTTTGATCTGGCTTAACCATCGATTCTGTTATCAATTAAAATAATGGACATTATTAAAGCAAATAAATGATGAATGGCTTGAGTACTATATTTTAATATTTATAACTTTTTTTAATAACAAACTGCATATATACAAATATTTTTTCTTTTTTATTCTTAAAATCGGGCTAAGATCTCGGAAATTGTTTGTAAAAGTTGAAAACCTAAAAAAAAGGGATACAAAACTAGAAGACGAGGTGTCTCAACCATGTTAATGGAAAATTATTTAATATATTTGGCCCAATGTGGTAGTGTTTCATGTGCATGAGAGAAATCTTAAAAAAAAAGGTTTTAATAATATTTGTAACAATTGGTTTGGACTTAGTTTCAATTTCATCCCTACCATGATAAAATTTTCAATTTGGTGCCTATGATAATTTGGTTCAACCTCATAAATTATCTCTAAATCATGTTTAAACTACTTGAAAAATCCATTTGTTTCCTTGTATTTTTTACTACGTCCTCATTCTTAATATGGTCAACTAATCCAAATTGAACATATTAACTCACGGTCAGGTAAAGAAAAAAAGTGTCAATGTGATATCGACTTGGACGACTTGTGAAGTCTTACTAAACTAGAGGGATAAAATTGAAACTTTTGGAACATAGAGACCAATTAGGAATTGTAACCAAATCATGGAGATCAAATTGAAACTAAGACTAAATCTGAAAACTTTTAAAATCTAACCGACCAAATTCAATCCCATTGAATAAGGTGGATGATTTAGAAGCATTATGTGTGAGAGTGCAGGTGAATGAATACTCATCTCTAAAAGACTCGGCACTGTATTCATGGGGGGAGCTGGGAGCAGGGCCTTTCTTCCTTCGCCTCGGAGGGCTTTGGTTAGTAAGTTTCACAGTCTTGGGAGTTCCCGTTGCAGCCGCAAGCTTCAATCCTTCGAGGGTACCTAACAAACTAAATATCCAATCTAATAATATTGAATTTGAAGGAGACTTTTAATTTATCAACCCATCATTAATTTCTGTGCTTACCCTTTTGTTTGTTTCAGGAACCTCTGCGATTCGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTCTCCTTGATTGTCTTGAGAATATATCTGGCAAGCTTCTCCATTATCCATTATTATAGTTCTTGCTTAGGTGAAAGCATTTGA

mRNA sequence

ATGCTCAGGCTGAATGTTTACTGCAGCAGTTGCTGCTCTCTGATTCGGAACGGCAGAGATGTGAGGACCGACTTCGGATTTGCGCCGTCGCTGGTGATCCGATTGAGGCGAAATCGGAGGCTGAATCGAGGGGTTCTGGCGAAGGCCTTGAAGGATGATCAGACCGACGGCGCCGGCGGCAGATTCTCCGGGCAGAAATGGGACCCTGGCTTGGAAATCGAAGTCCCTTTTGAACAACGGCCGGTGAATGAATACTCATCTCTAAAAGACTCGGCACTGTATTCATGGGGGGAGCTGGGAGCAGGGCCTTTCTTCCTTCGCCTCGGAGGGCTTTGGTTAGTAAGTTTCACAGTCTTGGGAGTTCCCGTTGCAGCCGCAAGCTTCAATCCTTCGAGGGAACCTCTGCGATTCGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTCTCCTTGATTGTCTTGAGAATATATCTGGCAAGCTTCTCCATTATCCATTATTATAGTTCTTGCTTAGGTGAAAGCATTTGA

Coding sequence (CDS)

ATGCTCAGGCTGAATGTTTACTGCAGCAGTTGCTGCTCTCTGATTCGGAACGGCAGAGATGTGAGGACCGACTTCGGATTTGCGCCGTCGCTGGTGATCCGATTGAGGCGAAATCGGAGGCTGAATCGAGGGGTTCTGGCGAAGGCCTTGAAGGATGATCAGACCGACGGCGCCGGCGGCAGATTCTCCGGGCAGAAATGGGACCCTGGCTTGGAAATCGAAGTCCCTTTTGAACAACGGCCGGTGAATGAATACTCATCTCTAAAAGACTCGGCACTGTATTCATGGGGGGAGCTGGGAGCAGGGCCTTTCTTCCTTCGCCTCGGAGGGCTTTGGTTAGTAAGTTTCACAGTCTTGGGAGTTCCCGTTGCAGCCGCAAGCTTCAATCCTTCGAGGGAACCTCTGCGATTCGTGCTTGCTGCTGGAATTGGAACTCTTCTCCTCGTCTCCTTGATTGTCTTGAGAATATATCTGGCAAGCTTCTCCATTATCCATTATTATAGTTCTTGCTTAGGTGAAAGCATTTGA

Protein sequence

MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGGRFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASFSIIHYYSSCLGESI

Homology

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BLAST of Spg031225 vs. NCBI nr
Match: KAG7035179.1 (putative protein ycf36 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.5 bits (807), Expect = 3.0e-82
Identity = 163/175 (93.14%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASFSIIHYYSSCLGESI 176
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLAS SII Y+SS LGE I
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASSSIIDYWSSGLGEII 175

[Close]

BLAST of Spg031225 vs. NCBI nr
Match: XP_023006930.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita maxima])

HSP 1 Score: 298.1 bits (762), Expect = 4.9e-77
Identity = 151/158 (95.57%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 159
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 158

[Close]

BLAST of Spg031225 vs. NCBI nr
Match: XP_022947583.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita moschata] >KAG6605201.1 Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.1 bits (762), Expect = 4.9e-77
Identity = 151/158 (95.57%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 159
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 158

[Close]

BLAST of Spg031225 vs. NCBI nr
Match: XP_023534221.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023534222.1 protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 150/158 (94.94%), Postives = 150/158 (94.94%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIR RRNRRLNR VLAKALKDDQ DGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRFRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 159
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 158

[Close]

BLAST of Spg031225 vs. NCBI nr
Match: XP_038900298.1 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Benincasa hispida])

HSP 1 Score: 268.5 bits (685), Expect = 4.1e-68
Identity = 138/158 (87.34%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           M RLNVYCSSCCSLIRN +DVRT F F      +LR NRRLN  VLAKALKDDQTDG GG
Sbjct: 1   MFRLNVYCSSCCSLIRNSKDVRTSFRF------QLRPNRRLNPRVLAKALKDDQTDGGGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDS LYSWGELGAGPFFLRLGGLWL SF VLG
Sbjct: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSVLYSWGELGAGPFFLRLGGLWLGSFIVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 159
           +PVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL
Sbjct: 121 IPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 152

[Close]

BLAST of Spg031225 vs. ExPASy Swiss-Prot
Match: Q9FN15 (Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CGLD27 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-41
Identity = 88/123 (71.54%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 37  RNRRLNRGVLAKALKDDQTDGAGG-RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYS 96
           + + L   V  KA++D   +G G   FSGQ WDP  EIEVP +QRPVNEYSSLK+  LYS
Sbjct: 47  KKQELFLSVSVKAVEDKGNNGGGSMSFSGQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYS 106

Query: 97  WGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLR 156
           WGELG   FF+RLGGLWLV+FTVLGVPVAAASFNPSREPLRF+LAAG GTL LVSLIVLR
Sbjct: 107 WGELGPSEFFIRLGGLWLVTFTVLGVPVAAASFNPSREPLRFILAAGTGTLFLVSLIVLR 166

Query: 157 IYL 159
           IYL
Sbjct: 167 IYL 169

[Close]

BLAST of Spg031225 vs. ExPASy Swiss-Prot
Match: P51273 (Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.2e-05
Identity = 29/84 (34.52%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 75  VPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREP 134
           VP EQ+PVNEY+SLK+S  + W  L +  +  ++  + L++   L  PV  + F  ++ P
Sbjct: 10  VPLEQQPVNEYNSLKNSWFFCWPTLSSHSYNKKI-TITLIATCFLVSPVLLSIFPIAKLP 69

Query: 135 LRFVLAAGIGTLLLVSLIVLRIYL 159
           L+F  +  I + L+   I++R+YL
Sbjct: 70  LKFFFSEFIISSLITCFILIRLYL 92

[Close]

BLAST of Spg031225 vs. ExPASy TrEMBL
Match: A0A6J1L1J9 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499573 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.4e-77
Identity = 151/158 (95.57%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 159
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 158

[Close]

BLAST of Spg031225 vs. ExPASy TrEMBL
Match: A0A6J1G705 (protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451407 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.4e-77
Identity = 151/158 (95.57%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           MLRLNVYCSSCCSLI  GRDVRT FGF PSLVIRLRRNRRLNR VLAKALKDDQ DGAGG
Sbjct: 1   MLRLNVYCSSCCSLIPEGRDVRTGFGFGPSLVIRLRRNRRLNRRVLAKALKDDQKDGAGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF GQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG
Sbjct: 61  RFPGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 159
           VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL
Sbjct: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 158

[Close]

BLAST of Spg031225 vs. ExPASy TrEMBL
Match: A0A6J1D5Q7 (uncharacterized protein LOC111017873 OS=Momordica charantia OX=3673 GN=LOC111017873 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.6e-68
Identity = 134/158 (84.81%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           MLRLN+YCS C  LIR+GRDVR  FG+  S VIRLR NRRL+ GV AKALKDDQ DG GG
Sbjct: 1   MLRLNLYCSGCGCLIRSGRDVRGGFGYGSSWVIRLRGNRRLSPGVSAKALKDDQRDGGGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RF G+ WDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELG GPFFLRLGGLWL SFT+LG
Sbjct: 61  RFPGRSWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGTGPFFLRLGGLWLASFTLLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 159
           VP+AAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL
Sbjct: 121 VPIAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 158

[Close]

BLAST of Spg031225 vs. ExPASy TrEMBL
Match: A0A5A7TRK5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003010 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 8.4e-67
Identity = 134/161 (83.23%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           MLRLN+YC+SCCSLIRN ++V T F F      +LR NRRLN  VLAKALKDDQTDG GG
Sbjct: 1   MLRLNLYCTSCCSLIRNNKNVTTSFRF------QLRPNRRLNPRVLAKALKDDQTDGGGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDS  YSWGELGAGPFF+RLGGLWL SF VLG
Sbjct: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSTFYSWGELGAGPFFIRLGGLWLGSFIVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLASF 162
           +PVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLA++
Sbjct: 121 IPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYLATW 155

[Close]

BLAST of Spg031225 vs. ExPASy TrEMBL
Match: A0A5D3BLA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00680 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.2e-66
Identity = 133/158 (84.18%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 1   MLRLNVYCSSCCSLIRNGRDVRTDFGFAPSLVIRLRRNRRLNRGVLAKALKDDQTDGAGG 60
           MLRLN+YC+SCCSLIRN ++V T F F      +LR NRRLN  VLAKALKDDQTDG GG
Sbjct: 1   MLRLNLYCTSCCSLIRNNKNVTTSFRF------QLRPNRRLNPRVLAKALKDDQTDGGGG 60

Query: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYSWGELGAGPFFLRLGGLWLVSFTVLG 120
           RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDS  YSWGELGAGPFF+RLGGLWL SF VLG
Sbjct: 61  RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSTFYSWGELGAGPFFIRLGGLWLGSFIVLG 120

Query: 121 VPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 159
           +PVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL
Sbjct: 121 IPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 152

[Close]

BLAST of Spg031225 vs. TAIR 10
Match: AT5G67370.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 171.0 bits (432), Expect = 8.4e-43
Identity = 88/123 (71.54%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 37  RNRRLNRGVLAKALKDDQTDGAGG-RFSGQKWDPGLEIEVPFEQRPVNEYSSLKDSALYS 96
           + + L   V  KA++D   +G G   FSGQ WDP  EIEVP +QRPVNEYSSLK+  LYS
Sbjct: 47  KKQELFLSVSVKAVEDKGNNGGGSMSFSGQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYS 106

Query: 97  WGELGAGPFFLRLGGLWLVSFTVLGVPVAAASFNPSREPLRFVLAAGIGTLLLVSLIVLR 156
           WGELG   FF+RLGGLWLV+FTVLGVPVAAASFNPSREPLRF+LAAG GTL LVSLIVLR
Sbjct: 107 WGELGPSEFFIRLGGLWLVTFTVLGVPVAAASFNPSREPLRFILAAGTGTLFLVSLIVLR 166

Query: 157 IYL 159
           IYL
Sbjct: 167 IYL 169

[Close]

BLAST of Spg031225 vs. TAIR 10
Match: AT5G11840.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 36/93 (38.71%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 69  PGLEIEVPFEQRPVNEYSSLKDSALYSW--GELGAGPFFLRLGGLWLVSFTVLGVPVA-A 128
           P  +  VP EQ+P+NEY SL  S  +SW  G+L      L L G     F  +G+PV+  
Sbjct: 57  PETDCPVPPEQQPINEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFF--VGLPVSWF 116

Query: 129 ASFNPSREPLRFVLAAGIGTLLLVSLIVLRIYL 159
            S  P  EP++ +LAA    + +V+L V+R+YL
Sbjct: 117 GSIGPEYEPVKRILAASSSGIFVVTLAVVRMYL 147

The following BLAST results are available for this feature:

BLAST of Spg031225 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035179.1	3.0e-82	93.14	putative protein ycf36 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023006930.1	4.9e-77	95.57	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita ...	[more]
XP_022947583.1	4.9e-77	95.57	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita ...	[more]
XP_023534221.1	1.4e-76	94.94	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Cucurbita ...	[more]
XP_038900298.1	4.1e-68	87.34	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic [Benincasa ...	[more]

BLAST of Spg031225 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN15	1.2e-41	71.54	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidop...	[more]
P51273	5.2e-05	34.52	Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1	[more]

BLAST of Spg031225 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L1J9	2.4e-77	95.57	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbit...	[more]
A0A6J1G705	2.4e-77	95.57	protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Cucurbit...	[more]
A0A6J1D5Q7	7.6e-68	84.81	uncharacterized protein LOC111017873 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5A7TRK5	8.4e-67	83.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BLA1	3.2e-66	84.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Spg031225 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67370.1	8.4e-43	71.54	Protein of unknown function (DUF1230)	[more]
AT5G11840.1	1.7e-06	38.71	Protein of unknown function (DUF1230)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 175..175
None	No IPR available	PANTHER	PTHR34214:SF3	PROTEIN CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, CHLOROPLASTIC	coord: 1..158
IPR009631	CGLD27-like	PFAM	PF06799	DUF1230	coord: 74..159 e-value: 2.9E-21 score: 76.1
IPR009631	CGLD27-like	PANTHER	PTHR34214	FAMILY NOT NAMED	coord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg031225.1	Spg031225.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990641	response to iron ion starvation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid