Spg031198 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg031198
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold8: 29854684 .. 29857144 (-)
RNA-Seq ExpressionSpg031198
SyntenySpg031198
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCATATTGTTCTCGCCGGCGCTGTCTTCTCCATCCGTGACCGTTCAAGTCCTCTCCTTCATTCGTGTTTCGTCGGCAACGTCTTCTTCTTCCCTTGTTCGACCAACTGCTTCTCTCCCTCTCCCGCTCCTGCTTGTTTTCGGCTTTAGAACACCCAAGTTGCGAGACCCATGAAGCCCGCACTCTCAATCCCTCTCTTTTAGTTTGCGTTCGTCAGTAGCGAGACCCGCGAGCAAGGTCATGTGTTTCTCTTCCTCTCGAGCGCGTAGACTAGTTACTCGAACTCCCTCACTCTTCCGTTTTCGTTCTCCAGTGACTCTCTCTCTCTTGCTCCTTCTCGTTCTCCCTTGCGTGCGAAGACCCACGAGCCGACAACTTCTAGCACCATTCGGTGTCTGCAACAAATCGCGAACAGAAGGTCCTCGATAACAGCCTCGACCAGTGGCGTTGGCTTCCTTCGCTCGAACCTCAGCCTCGTTTTGCCTTCAAACTGTGAGTTCCAGCCCGATTCTCCTCGTGTCGGTAAGATTAAGCTCCTACCCATAGTTCGTTTGGCTCTAAATCAAATTGCCCACTTTCTAACGACTCCAATTTGCAGGATTAGGCCTTTTGAATCAAGTTCCAGCAAGCTGTTAGGTTCGAATCTGGCCTTTGACGTTTACCCATAGCCCGAAAGGTCTTATATCGGATTGCCCATAGTCTTGCGGCTTTAGATCAATGTTTTTGGAGCTTTTCAGTCACTGTCCAGCAAGGATTCAAGTCTTTTGGGTAAGATTCAGCAATTTCCAGCATGCTTTAGACCTTTCGAACTCATTAAAAGTATTTTAAAGTTTGTTAGATCGATTCCTAACGCTTGGAAACTCATCATTTATAGGTTCTCACTCCTTTGAGCAGTTTCGAGCGAACGTTGAATGCTTGTTAACTTAGGAAGTTTGATCTAGCTTCTATAGTTGCCTTTTGGTAAAGTTTCCCCTCTTAAATACCTTTCCTAGCTTCAACTAAGTTTTAGAATTGAGTTTAGCCTTGAATCTTGTATTCTATATTGCAGGAGCTAGTTAGACTAATTTAGGAGCGCCTTAGAACATTCAGTAAGTGGATTTCTACCTGTTGGGTCTGCTTGCTTGTATGCTAGTATGTTGTGTACTCTACTTGTTTGGTTATAATATATGTTGTTACATGTATGTGTTGTTATATTTATGATGAGTTTGAGCATGTTGAAACGCTTTGTTGCTTTGATATATTGAATTGTTGTGTTGAGCATGTTGAATGTGGTGAGACGATATTGATGTTCATGTCCTCATTTCATTGTGGATGTTTAGAAATCATGTTTAAAACGCATTCTGGATTGTGAGGATGTCATTGGCATAAACCATGGTCTAGAAGCATGATGAGTAGGATTCATGCATTCTAGTGAGATTGTGAGGTCAGAGGACCTTGTGCATTGAAAAGGAAAGTTAGGTGAATACCAAGTGCCTCGAGTAAAAATGGTCGAGGGGTGGTATGCCACTAATGGATTAAGAGGAGCATCGGGTGCCTTGGGTAATATGGCCAAGGGGTGATGTGATGAGTCTATATATTGTGAAAGTCATCGGGTGCCTTGGGTAATATGGCCAAGGGGTGATGTACAGTTTGATTGTGAAGTCATCTTGTGCCTTGGGTAATATGGCCAAGGGGCGATGCACAGTTCGAGGCCTTGGGTAATATGGTCAAGGGTCGAACGCTGAGCGCCGTAGAGAAACGTCGAGGCCCTGGGTAATATGGTCAGGGGTCGGCGTGACTCGAAGGAGTCAGTCTTAGAGAGCTTTATGAGGGCTATGAGTGTTGAGCGAGCTCATGGAGCTTAAGAGGAGATTGAGTTGCATGGCATGATACGGAATTCATGTGTTTTGAGTATGCATGACATGGTGTGGAATTCATGTGTTAGGTGCATGGTTGTTGCACGATTGTATTAGTTGAGTATGTTCTATGTGTTGATTGCTCACTTTGTATATAAGGCATGTTATTGTGATTGAAAAGCATGATGTTTGCCTTGTATGTTGCACGTTGTTTGATGGCTCTTCAGGTGTGAGCCACTTACTCAGTACCGCTGTTTTGTACTGATCCACCACCAGATTTGCAGGTGATGAAGAATACTACGAGCCTGGTGATGCTGAGGAGCAGGCTTGAGAAAGCAAAGTTTATGAGTTTAATTCATTAATATGTTCTGGTTGTTTAAACATTGTTAGGAGAGATAGAATTTTGTGTTAGTCAGGAGGTGTTGTTTAGAATAATGGTTATCGATATACTTCGTTTAGTACTTCGAATTAGACTTAATTTGAATTGTGTTAACTGAATGAGAATGGTTACGAGATCTAACTCGTAATCGTGTTGCAACTTTATTTAGTGGTATGTAATGCTTTATCAGGTTGTAAAATTTTGGTTTAAGCAAAATTACGTCGTTATGCTGCCGAATTTTCGG

mRNA sequence

ATGACCATATTGTTCTCGCCGGCGCTGTCTTCTCCATCCGTGACCGTTCAAGTCCTCTCCTTCATTCGTGTTTCGTCGGCAACTGACTCTCTCTCTCTTGCTCCTTCTCGTTCTCCCTTGCGTGCGAAGACCCACGAGCCGACAACTTCTAGCACCATTCGGTGTCTGCAACAAATCGCGAACAGAAGGTCCTCGATAACAGCCTCGACCAGTGGCGTTGGCTTCCTTCGCTCGAACCTCAGCCTCGTTTTGCCTTCAAACTGTGAGTTCCAGCCCGATTCTCCTCGTGTCGCCCGAAAGGTCTTATATCGGATTGCCCATAGTCTTGCGGCTTTAGATCAATGTTTTTGGAGCTTTTCAGTCACTGTCCAGCAAGGATTCAAGTCTTTTGGGGGCGATGCACAGTTCGAGGCCTTGGGTAATATGGTCAAGGGTCGAACGCTGAGCGCCGTAGAGAAACGTCGAGGCCCTGGATTTGCAGGTGATGAAGAATACTACGAGCCTGGTGATGCTGAGGAGCAGGCTTGA

Coding sequence (CDS)

ATGACCATATTGTTCTCGCCGGCGCTGTCTTCTCCATCCGTGACCGTTCAAGTCCTCTCCTTCATTCGTGTTTCGTCGGCAACTGACTCTCTCTCTCTTGCTCCTTCTCGTTCTCCCTTGCGTGCGAAGACCCACGAGCCGACAACTTCTAGCACCATTCGGTGTCTGCAACAAATCGCGAACAGAAGGTCCTCGATAACAGCCTCGACCAGTGGCGTTGGCTTCCTTCGCTCGAACCTCAGCCTCGTTTTGCCTTCAAACTGTGAGTTCCAGCCCGATTCTCCTCGTGTCGCCCGAAAGGTCTTATATCGGATTGCCCATAGTCTTGCGGCTTTAGATCAATGTTTTTGGAGCTTTTCAGTCACTGTCCAGCAAGGATTCAAGTCTTTTGGGGGCGATGCACAGTTCGAGGCCTTGGGTAATATGGTCAAGGGTCGAACGCTGAGCGCCGTAGAGAAACGTCGAGGCCCTGGATTTGCAGGTGATGAAGAATACTACGAGCCTGGTGATGCTGAGGAGCAGGCTTGA

Protein sequence

MTILFSPALSSPSVTVQVLSFIRVSSATDSLSLAPSRSPLRAKTHEPTTSSTIRCLQQIANRRSSITASTSGVGFLRSNLSLVLPSNCEFQPDSPRVARKVLYRIAHSLAALDQCFWSFSVTVQQGFKSFGGDAQFEALGNMVKGRTLSAVEKRRGPGFAGDEEYYEPGDAEEQA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg031198.1Spg031198.1mRNA