Spg031049 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg031049
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold10: 22736075 .. 22736695 (+)
RNA-Seq ExpressionSpg031049
SyntenySpg031049
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAACAGAAAACCAGAAAAAAATATTCAGTGCTTTCCCAAGAAGCAGCAGCAGCAGCAGCTTCTCCATCTTACAACATTGCCGATTTCTACGTCGATCCACCTGCAAGCCACGTGCTTCCTTCACAGTCCTTCTCTATCGACGACACTCGCGGCGCCCGGGCTCACCGGAGATTTAACTCCTTCAGCGGATCTACGGAGGAGCAGCGGTGGAGAAGTGGCGGCGCCGCCGGGAAGTTCGGGGTCGGGCATGGGCCACCGCCGGCGCAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTGGACTGGGCAGTGAAATTGATGGGTTTGTCGTTGAATTTCGACTCTACAATGTGTACAGCATAATAACGTTAGCTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTGCATCAAAGGTTTTGTTTAGATTGCAATTTGGCATCCAGATTCAGGCTGATTGAGTTCATGTTTTGTCTTTGTTTTTGCATTTTTTTAAAAAAAAAAAAGAAATGGAAAATTATGTATTATTATTATTATTATTATTATTTTGGTTGTTATATTGTGGTGCAGAACGAGCCAAATTGGGATTGCTGGACACAGCCATCTTGTTTGA

mRNA sequence

ATGAAGAAACAGAAAACCAGAAAAAAATATTCAGTGCTTTCCCAAGAAGCAGCAGCAGCAGCAGCTTCTCCATCTTACAACATTGCCGATTTCTACGTCGATCCACCTGCAAGCCACGTGCTTCCTTCACAGTCCTTCTCTATCGACGACACTCGCGGCGCCCGGGCTCACCGGAGATTTAACTCCTTCAGCGGATCTACGGAGGAGCAGCGGTGGAGAAGTGGCGGCGCCGCCGGGAAGTTCGGGGTCGGGCATGGGCCACCGCCGGCGCAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCAACGAGCCAAATTGGGATTGCTGGACACAGCCATCTTGTTTGA

Coding sequence (CDS)

ATGAAGAAACAGAAAACCAGAAAAAAATATTCAGTGCTTTCCCAAGAAGCAGCAGCAGCAGCAGCTTCTCCATCTTACAACATTGCCGATTTCTACGTCGATCCACCTGCAAGCCACGTGCTTCCTTCACAGTCCTTCTCTATCGACGACACTCGCGGCGCCCGGGCTCACCGGAGATTTAACTCCTTCAGCGGATCTACGGAGGAGCAGCGGTGGAGAAGTGGCGGCGCCGCCGGGAAGTTCGGGGTCGGGCATGGGCCACCGCCGGCGCAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCAACGAGCCAAATTGGGATTGCTGGACACAGCCATCTTGTTTGA

Protein sequence

MKKQKTRKKYSVLSQEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARAHRRFNSFSGSTEEQRWRSGGAAGKFGVGHGPPPAQLVRFRSQRILSTSQIGIAGHSHLV
Homology
[Close]
BLAST of Spg031049 vs. NCBI nr
Match: KAG7017171.1 (hypothetical protein SDJN02_22283, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-19
Identity = 64/106 (60.38%), Postives = 74/106 (69.81%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLSQEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARAHRRF 60
           MKK + R +YSVLS EAAAAAASPS+NIADFYVDPP++HV P+     +D    RAHRR+
Sbjct: 12  MKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTS--KSEDPGATRAHRRY 71

Query: 61  NSFSGSTEEQRWR----SGGAAGKFGVGHGPPPAQLVRFRSQRILS 103
           NSF GST E+ WR    +  AA      HGP   QLVRFRSQRILS
Sbjct: 72  NSFGGSTPEE-WRRTTSAAAAAAAAKSSHGP---QLVRFRSQRILS 111

[Close]
BLAST of Spg031049 vs. NCBI nr
Match: KAG6579722.1 (hypothetical protein SDJN03_24170, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-19
Identity = 64/106 (60.38%), Postives = 74/106 (69.81%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLSQEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARAHRRF 60
           MKK + R +YSVLS EAAAAAASPS+NIADFYVDPP++HV P+     +D    RAHRR+
Sbjct: 12  MKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTS--KSEDPGATRAHRRY 71

Query: 61  NSFSGSTEEQRWR----SGGAAGKFGVGHGPPPAQLVRFRSQRILS 103
           NSF GST E+ WR    +  AA      HGP   QLVRFRSQRILS
Sbjct: 72  NSFGGSTPEE-WRRTTSAAAAAAAAKSSHGP---QLVRFRSQRILS 111

[Close]
BLAST of Spg031049 vs. NCBI nr
Match: XP_023551320.1 (uncharacterized protein LOC111809172 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 100.9 bits (250), Expect = 7.5e-18
Identity = 64/105 (60.95%), Postives = 73/105 (69.52%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLSQEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARAHRRF 60
           MKK + R +YSVLS E AAAAASPS+NIADFYVDPP++HV P+     +D    RAHRR+
Sbjct: 12  MKKTRIRSQYSVLSPE-AAAAASPSFNIADFYVDPPSTHVFPTS--KSEDPGATRAHRRY 71

Query: 61  NSFSGSTEEQRWR---SGGAAGKFGVGHGPPPAQLVRFRSQRILS 103
           NSF GST E+ WR   S  AA      HGP   QLVRFRSQRILS
Sbjct: 72  NSFGGSTPEE-WRRTTSAAAAAAAKSSHGP---QLVRFRSQRILS 109

[Close]
BLAST of Spg031049 vs. NCBI nr
Match: XP_022929072.1 (uncharacterized protein LOC111435769 [Cucurbita moschata])

HSP 1 Score: 100.5 bits (249), Expect = 9.8e-18
Identity = 61/102 (59.80%), Postives = 71/102 (69.61%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLSQEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARAHRRF 60
           MKK + R +YSVLS E AAAA SPS+NIADFYVDPP++HV P+     +D    RAHRR+
Sbjct: 12  MKKTRIRSQYSVLSPE-AAAAPSPSFNIADFYVDPPSTHVFPTS--KSEDPGATRAHRRY 71

Query: 61  NSFSGSTEEQRWRSGGAAGKFGVGHGPPPAQLVRFRSQRILS 103
           NSF GST E+  R+  AA      HGP   QLVRFRSQRILS
Sbjct: 72  NSFGGSTPEEWRRTTSAAAAAKSSHGP---QLVRFRSQRILS 107

[Close]
BLAST of Spg031049 vs. NCBI nr
Match: KAG7017165.1 (hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 61/102 (59.80%), Postives = 71/102 (69.61%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLSQEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARAHRRF 60
           MKK + R +YSVLS E AAAA SPS+NIADFYVDPP++HV P+     +D    RAHRR+
Sbjct: 12  MKKTRIRSQYSVLSPE-AAAAPSPSFNIADFYVDPPSTHVFPTS--KSEDPGATRAHRRY 71

Query: 61  NSFSGSTEEQRWRSGGAAGKFGVGHGPPPAQLVRFRSQRILS 103
           NSF GST E+ WR   +A      HGP   QLVRFRSQRILS
Sbjct: 72  NSFGGSTPEE-WRRTTSAAAAKSSHGP---QLVRFRSQRILS 106

[Close]
BLAST of Spg031049 vs. ExPASy TrEMBL
Match: A0A6J1ELR2 (uncharacterized protein LOC111435769 OS=Cucurbita moschata OX=3662 GN=LOC111435769 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.8e-18
Identity = 61/102 (59.80%), Postives = 71/102 (69.61%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLSQEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARAHRRF 60
           MKK + R +YSVLS E AAAA SPS+NIADFYVDPP++HV P+     +D    RAHRR+
Sbjct: 12  MKKTRIRSQYSVLSPE-AAAAPSPSFNIADFYVDPPSTHVFPTS--KSEDPGATRAHRRY 71

Query: 61  NSFSGSTEEQRWRSGGAAGKFGVGHGPPPAQLVRFRSQRILS 103
           NSF GST E+  R+  AA      HGP   QLVRFRSQRILS
Sbjct: 72  NSFGGSTPEEWRRTTSAAAAAKSSHGP---QLVRFRSQRILS 107

[Close]
BLAST of Spg031049 vs. ExPASy TrEMBL
Match: A0A6J1I2E5 (uncharacterized protein LOC111468990 OS=Cucurbita maxima OX=3661 GN=LOC111468990 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-17
Identity = 62/103 (60.19%), Postives = 72/103 (69.90%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLSQEAAAAAA-SPSYNIADFYVDPPASHVLPSQSFSIDDTRGARAHRR 60
           MKK + R +YSVLS EAAAAAA SPS+NIADFYVDPP++HV P+     +D    RA RR
Sbjct: 12  MKKTRIRSQYSVLSPEAAAAAAPSPSFNIADFYVDPPSTHVFPTS--KSEDPGAPRARRR 71

Query: 61  FNSFSGSTEEQRWRSGGAAGKFGVGHGPPPAQLVRFRSQRILS 103
           +NSF GST E+ WR   +A      HGP   QLVRFRSQRILS
Sbjct: 72  YNSFGGSTPEE-WRRTTSAAAGKSSHGP---QLVRFRSQRILS 108

[Close]
BLAST of Spg031049 vs. ExPASy TrEMBL
Match: A0A0A0LL24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-13
Identity = 58/107 (54.21%), Postives = 72/107 (67.29%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLS----QEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARA 60
           MKK + R++Y+VLS     EA   AAS S+NIADFYVDPP+   + S+          RA
Sbjct: 12  MKKNRRRRQYTVLSTKAESEAETEAASLSFNIADFYVDPPS---IKSE---------GRA 71

Query: 61  HRRFNSFSGSTEEQRWRSGGAAGKFGVGHGPPP-AQLVRFRSQRILS 103
           +RR+NS++GST ++  RSG AAGK    HGPPP  QLVRFRSQRILS
Sbjct: 72  YRRYNSYAGSTTQEWRRSGVAAGK-SSSHGPPPEQQLVRFRSQRILS 105

[Close]
BLAST of Spg031049 vs. ExPASy TrEMBL
Match: A0A5A7ST27 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00090 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11
Identity = 53/106 (50.00%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLS----QEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARA 60
           MKK + R++Y+VLS     E+   AAS S+NIADFYVDPP+   + S+          R 
Sbjct: 12  MKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPS---IKSE---------GRG 71

Query: 61  HRRFNSFSGSTEEQRWRSGGAAGKFGVGHGPPPAQLVRFRSQRILS 103
           +RR+NS+ GST ++  RSG AAGK      PP  QLVRFRSQRILS
Sbjct: 72  YRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILS 105

[Close]
BLAST of Spg031049 vs. ExPASy TrEMBL
Match: A0A1S3B4K9 (uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11
Identity = 53/106 (50.00%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 1   MKKQKTRKKYSVLS----QEAAAAAASPSYNIADFYVDPPASHVLPSQSFSIDDTRGARA 60
           MKK + R++Y+VLS     E+   AAS S+NIADFYVDPP+   + S+          R 
Sbjct: 12  MKKNRRRRQYTVLSTKAESESEGEAASLSFNIADFYVDPPS---IKSE---------GRG 71

Query: 61  HRRFNSFSGSTEEQRWRSGGAAGKFGVGHGPPPAQLVRFRSQRILS 103
           +RR+NS+ GST ++  RSG AAGK      PP  QLVRFRSQRILS
Sbjct: 72  YRRYNSYGGSTPQEWRRSGVAAGKSRSHGQPPEQQLVRFRSQRILS 105

The following BLAST results are available for this feature:
BLAST of Spg031049 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7017171.13.1e-1960.38hypothetical protein SDJN02_22283, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6579722.13.1e-1960.38hypothetical protein SDJN03_24170, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023551320.17.5e-1860.95uncharacterized protein LOC111809172 [Cucurbita pepo subsp. pepo][more]
XP_022929072.19.8e-1859.80uncharacterized protein LOC111435769 [Cucurbita moschata][more]
KAG7017165.11.7e-1759.80hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Spg031049 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg031049 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ELR24.8e-1859.80uncharacterized protein LOC111435769 OS=Cucurbita moschata OX=3662 GN=LOC1114357... [more]
A0A6J1I2E51.1e-1760.19uncharacterized protein LOC111468990 OS=Cucurbita maxima OX=3661 GN=LOC111468990... [more]
A0A0A0LL241.6e-1354.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1[more]
A0A5A7ST271.1e-1150.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B4K91.1e-1150.00uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=... [more]
BLAST of Spg031049 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg031049.1Spg031049.1mRNA