Spg031026 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg031026
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	mRNA decay activator protein ZFP36L2-like isoform X2
Location	scaffold10: 22161212 .. 22164613 (+)
RNA-Seq Expression	Spg031026
Synteny	Spg031026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTCCTACTCCACTCCCAAGCTCCGCATTCATGGTGATTTTCCCTCCTCTTGCCGTAGACGATGCCAAAGAAGAAATGTAACTCCAATTTCTCTCTCACTTTCGCAGCCTCTCAGCACCGGATTCTACTCTCTGAACCATTCCAACTCGCGATTTTGAGTTTCCAGGTACACGTTCTACTCTTTTCCTTGTGCAAAAAGGACCGTCTTTCTTTTCCTTCGTATCCGCGCTTGAAGATTTCAAATCAATCTTCAGGATCTTTTACTCTGTCAGTGTGAATTCGGATTGAAGTTCAGCGTTCACGGCTTCGATTATGAACTCTTCACTGCTCTCCACTTTCGTTTCAATTGATGTTCTTTCCACAATGTGTGCATGTTCGTTTGTGTTTTGAATCGAGCCCTAGCGTGTTTGATCCTCTCATTTTGAAAGAATTATTTGCTCTGGAACTGAATGTTTCTTCTCTGCTCTCCGTTTTTGCATCTGTAAGTTTAATTCACCGATTCTTTGGAGAGTACTGCATCATGATTTCCAACGATGAACAAATCTCTGTTTCGAATTGTTAGGATGATCAGCCTCAGCATTTATCCTGCGTCGCCGATGAACACATAGAAATGCTGATAGATTTTCTTTTCTCTGTGCATCAAATTGTTTTTAGTAATTCGGAAATTTCAGGTTCTTTTCCTGAATCATGGAAGATCGTCAGGGCAAGAGGAGCTCCAAAACGTCCATTATCAAAGGCCTAAACGCTACGGTTCCACCGATCAACATTCAGATGGACAATCACTTGGTAATCGGCGGGACCGGACACTATCACCAGGAAACAAACTCTAAAAGTCCTACGATCCTCGATCGTTCCACACCGATCGTAAGGTACTTCCGCTCTCGATCTCCGGTGGTCGGAAAATTACCATCCGTCGGCGACACATTCTCCCCTCCGGTAGCGGACGTCATCAATACCAACTACCGGTCCGCTATTATCAACCACTACGCTAGCAGCACTTCCGGAAGCAGTAGCTTCGGATCTCGTGGAGGAGGATCGTCGTTGTCACCACTTTCGGCTATAGAGAATTTGGAAACACCGCCTGTAAGGTCTCCGCAAATTTATGGAACTCCGGTGAAGGTCGATGAGGAAGTGATAGTAATGGATGCAATTTTGATCGCTTCGGTCCCTGGAGGAGTGAAGACCATAAGGTCTGCTGTAGATTCCGGAAGCGGCGGAGGTTCGTCGTTGGGCAAAAATCAATATAGAACGGACATTTGCCGCTCCTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGGTTAGTTATTTTGTCCCCACAGTAAAGATACGATCTGAATTATTGGCTCCACAAATTTATTGGCCACAATGCAGTATCATGTTTATTACTTAAAGGACACCTCTGTGGTATTCGATTATTATTTAGACAAATGGATCAAAAAGATATTCACTATTTCAAGGAATAGTCCGGTTAAAGATTAGAAGTTCGCGTTTAGTGGGTGAACTTATGAATTAAATTATTTCTTTATAATTTAACGTGGTTTAACTTTACAATTATTCATGTTTCATGTGAGTAGTTTTTTAAGTCAATTGAATGGATATGTACACCTCAATTAATAACTCATATTTCAATATCATATCTCAGCACCTTCATTTATAAATTTAACGTTTTCCTAAATAGATTGGCTTGATTGGAATACATTGACGCATTAAGAGAGCGGTACAGGAGGAATTAGTGTCTCTTAGAATCTGAAAATGTGTGCGCAATAAGAAAATTTGGAGACTGATTCAAGGATGGAATATATCCCACATCCATTTTTTTTTTTTGTTTGGAATATGGTCTCTTATATCAGGAACTCGGTTTTAATGTGTTTAGATTTAGAGTGAAACAGTAGGTTGGCTGCCAAGGTTGACGCATCACAAGTTATTAGAGTAGCTGATAAACCAACTTTTAACTTTTTCAGAAGTTGGATTAATCATAGATTTTGGTCATTCCCTTTCAGTCGTTGAATGAGTAGCAACATTGAGTTTCTAGAGCACAATGACCCGAATTCGGAGCCCGAAAACACAACACTACTAACTTTCTAGTGTCTATCATGAACATCAAGTGCTCTTGATGTCTAATAATGGATATATTATTGGATTGTTCTTTGTATTATAATTTATTAATAATTATTAGGTTGGCAGATATTATTCCTTAAATAGGACCAAGAACATGAATTTCGCAAAAGTTGTGTAGGATCCGTATATTAGCTAACAACTATACACCTGTAGAATCTGTGAGTCCAATGACCTAAAGTTTAATTAATTAAATATTCTGTTTAATTACTAATTTCATTAACAATAGCTATTTTGATAATATTGCTAAACTACCATTAGACTCAAAAGCTTAAGCATTATATGTTTAACTATCATTTACATGTTCGTATGTTTAATTTTTTGAATGATCTTCTCAATCAGCCATGTTTGAAATTAATGGGAGAAAGTTGATTTGTGCATTTATGCGGTGGTGGATTTGGTTTTTCTGATTTGAATTTTCTGTTTGCAGTTTGCACATGGCAAAGAGGAGCTTCGCCCAGCTCGTTTACCAGTTAAAAGCAAACCTAAGGTACCATTGACATCTGATAATTAAATAAACTGCAGATTTTGTTGGAATAATAGGCTTTTAGATTTGCATGTTCTTCACTACTACAGTTTGGCGAACTGTATTCTACACACGGTCCCAAGTTCCGCAACAGTCATTCACCAACAGGAATAGCTGCAACAAAAACAATGCAATCAAACTTAATAGATACAATCAACAAAACTGAACTTAGCAGAAGGGAAGGTCATACAACAACAACGTCCTTGACTTCGATACGACACATGAACACTAAGCCAACCCCCATCTCTACCATTTCCATCGTCGATTGGTCACCCGAAGATGATGGCATCAAAATCACTGTCCCCAAAACAGAGAGCACAAAAAGAGAAGATGTAAACCAACACATCCATGGAGTTCTTTATGGTTCCACCACTGAGAGGACCAAAAAGAGACTGCCAGTTTTCACTCAACTTTGCTCTGAAAAAACCCAACAAGAATAGGAGGGCCAGCGCCAAGCCTTTTCCCATGTTTACACCATTTTGTTTTGAAACACTCATCAGATTTGTAATAGGAGCGGGGGTGCATGTATATGCTTGTGCATGCAGAAAATTTTGTGTTTCACAGTTAGAACTTGGAAGCAACACGATATCCATAAAGATGGATGATGTTCAAAAGAAATTAACCAATAAGAGTAAAGAAACTTTAATCGCTTTCAGGTGCTTTTTGTTCTTTTAAACAAAAGTTTTCTTTTGTTAGTTAGTTGCTTCTATGTACAATGATGAACAACCTATTAAGGCATGGCTGC

mRNA sequence

ATGGAAGATCGTCAGGGCAAGAGGAGCTCCAAAACGTCCATTATCAAAGGCCTAAACGCTACGGTTCCACCGATCAACATTCAGATGGACAATCACTTGGTAATCGGCGGGACCGGACACTATCACCAGGAAACAAACTCTAAAAGTCCTACGATCCTCGATCGTTCCACACCGATCGTAAGGTACTTCCGCTCTCGATCTCCGGTGGTCGGAAAATTACCATCCGTCGGCGACACATTCTCCCCTCCGGTAGCGGACGTCATCAATACCAACTACCGGTCCGCTATTATCAACCACTACGCTAGCAGCACTTCCGGAAGCAGTAGCTTCGGATCTCGTGGAGGAGGATCGTCGTTGTCACCACTTTCGGCTATAGAGAATTTGGAAACACCGCCTGTAAGGTCTCCGCAAATTTATGGAACTCCGGTGAAGGTCGATGAGGAAGTGATAGTAATGGATGCAATTTTGATCGCTTCGGTCCCTGGAGGAGTGAAGACCATAAGGTCTGCTGTAGATTCCGGAAGCGGCGGAGGTTCGTCGTTGGGCAAAAATCAATATAGAACGGACATTTGCCGCTCCTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGCAAAGAGGAGCTTCGCCCAGCTCGTTTACCAGTTAAAAGCAAACCTAAGGTACCATTGACATCTGATAATTAA

Coding sequence (CDS)

ATGGAAGATCGTCAGGGCAAGAGGAGCTCCAAAACGTCCATTATCAAAGGCCTAAACGCTACGGTTCCACCGATCAACATTCAGATGGACAATCACTTGGTAATCGGCGGGACCGGACACTATCACCAGGAAACAAACTCTAAAAGTCCTACGATCCTCGATCGTTCCACACCGATCGTAAGGTACTTCCGCTCTCGATCTCCGGTGGTCGGAAAATTACCATCCGTCGGCGACACATTCTCCCCTCCGGTAGCGGACGTCATCAATACCAACTACCGGTCCGCTATTATCAACCACTACGCTAGCAGCACTTCCGGAAGCAGTAGCTTCGGATCTCGTGGAGGAGGATCGTCGTTGTCACCACTTTCGGCTATAGAGAATTTGGAAACACCGCCTGTAAGGTCTCCGCAAATTTATGGAACTCCGGTGAAGGTCGATGAGGAAGTGATAGTAATGGATGCAATTTTGATCGCTTCGGTCCCTGGAGGAGTGAAGACCATAAGGTCTGCTGTAGATTCCGGAAGCGGCGGAGGTTCGTCGTTGGGCAAAAATCAATATAGAACGGACATTTGCCGCTCCTGGGAGGATTCTGGAAGCTGCCGCTTCGGCCACAAATGCCAGTTTGCACATGGCAAAGAGGAGCTTCGCCCAGCTCGTTTACCAGTTAAAAGCAAACCTAAGGTACCATTGACATCTGATAATTAA

Protein sequence

MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTILDRSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSRGGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDSGSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPKVPLTSDN

Homology

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BLAST of Spg031026 vs. NCBI nr
Match: XP_022154583.1 (uncharacterized protein LOC111021811 [Momordica charantia] >XP_022154584.1 uncharacterized protein LOC111021811 [Momordica charantia])

HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105
Identity = 202/235 (85.96%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTI-------L 60
           ME RQGKRSSKTSIIKGLN TVPPINIQMDNHLVIGGTGHYHQETN KSPT+       L
Sbjct: 1   MEGRQGKRSSKTSIIKGLNVTVPPINIQMDNHLVIGGTGHYHQETNCKSPTMLDRYSEKL 60

Query: 61  DRSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
           DRST IVRYFRSRSPV+GKLPSVGDTFS PV DVIN NYRSAI+NHYASSTS SSSFGSR
Sbjct: 61  DRSTSIVRYFRSRSPVIGKLPSVGDTFSTPVPDVINANYRSAIMNHYASSTSRSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
           GGGSSLSPLSAIENLETP  RSPQIYGTPVKVDEEVIVMD ILI+SVPGG KT+RSA +S
Sbjct: 121 GGGSSLSPLSAIENLETPTARSPQIYGTPVKVDEEVIVMDGILISSVPGGAKTMRSASES 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPKV 229
            +GGGS  GKN YRTDICRSWEDSGSCR+GHKCQFAHGKEELRPARLPVK+KPKV
Sbjct: 181 VTGGGSLSGKNLYRTDICRSWEDSGSCRYGHKCQFAHGKEELRPARLPVKNKPKV 235

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BLAST of Spg031026 vs. NCBI nr
Match: XP_023536047.1 (mRNA decay activator protein ZFP36L2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.0 bits (1003), Expect = 7.4e-105
Identity = 201/234 (85.90%), Postives = 211/234 (90.17%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTILD------ 60
           MEDRQGKRSSK +IIKGLNATV PI IQMDNHLVIGGTGHYHQETNSK PTILD      
Sbjct: 1   MEDRQGKRSSKAAIIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  -RSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
            RSTPIV YFRSRSPVVGKLPSVGDTFS PVADVIN NYRS+IINH+ASSTSGSSSFGSR
Sbjct: 61  ERSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
            GGSSLSPLSAIENLET PVRSPQIYGTP+KV EEVIVMD ILI+SV GG KT++SA+DS
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPK 228
           GSGGGSSL KNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRP  LP+K+KPK
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK 234

[Close]

BLAST of Spg031026 vs. NCBI nr
Match: XP_023536031.1 (uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536040.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.0 bits (1003), Expect = 7.4e-105
Identity = 201/234 (85.90%), Postives = 211/234 (90.17%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTILD------ 60
           MEDRQGKRSSK +IIKGLNATV PI IQMDNHLVIGGTGHYHQETNSK PTILD      
Sbjct: 1   MEDRQGKRSSKAAIIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  -RSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
            RSTPIV YFRSRSPVVGKLPSVGDTFS PVADVIN NYRS+IINH+ASSTSGSSSFGSR
Sbjct: 61  ERSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
            GGSSLSPLSAIENLET PVRSPQIYGTP+KV EEVIVMD ILI+SV GG KT++SA+DS
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPK 228
           GSGGGSSL KNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRP  LP+K+KPK
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK 234

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BLAST of Spg031026 vs. NCBI nr
Match: KAG7032491.1 (mRNA decay activator protein ZFP36L3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.0 bits (998), Expect = 2.8e-104
Identity = 200/235 (85.11%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTIL------- 60
           MEDRQGKRSSK SIIKGLNATV PI IQMDNHLVIGGTGHY QETNSK PTIL       
Sbjct: 1   MEDRQGKRSSKASIIKGLNATVRPIKIQMDNHLVIGGTGHYQQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
           DRSTPIV YFRSRSPVVGKLPSVGDTFS PVADVIN NYRS+IINH+ASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
            GGSSLSPLSAIENLET PVRSPQIYGTP+KV EEVIVMD ILI+SV GG KT++SA+DS
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPKV 229
           GSGGGSSL KNQYRTDICRSWEDSGSCRFGHKCQFAHGKEE+RP  LP+K+KPK+
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEEIRPVHLPLKTKPKL 235

[Close]

BLAST of Spg031026 vs. NCBI nr
Match: XP_022974000.1 (mRNA decay activator protein ZFP36L2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 387.1 bits (993), Expect = 1.1e-103
Identity = 199/234 (85.04%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTIL------- 60
           MEDRQGKRSSK SIIKGLN TV PI IQMDNHLVIGGTGHYHQETNSK PTIL       
Sbjct: 1   MEDRQGKRSSKASIIKGLNPTVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
           DRSTPIV YFRSRSPVVGKLPS GDTFS PVADVIN +YRS+IINH+ASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSAGDTFSTPVADVINASYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
            GGSSLSPLSA+ENLET PVRSPQIYGTP+KV EEVIVMD ILI+SV GG KT++SA+DS
Sbjct: 121 RGGSSLSPLSALENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPK 228
           GSGGGSSL KNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRP  LPVK+KPK
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPVKTKPK 234

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BLAST of Spg031026 vs. ExPASy Swiss-Prot
Match: Q5ISE2 (mRNA decay activator protein ZFP36L3 OS=Mus musculus OX=10090 GN=Zfp36l3 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 175 SGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELR 217
           SG  S     +Y+T++CR +E+SG C++GHKCQFAHG  ELR
Sbjct: 112 SGSSSLATSERYKTELCRPFEESGICKYGHKCQFAHGYRELR 153

[Close]

BLAST of Spg031026 vs. ExPASy Swiss-Prot
Match: Q07352 (mRNA decay activator protein ZFP36L1 OS=Homo sapiens OX=9606 GN=ZFP36L1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.4e-07
Identity = 20/40 (50.00%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 177 GGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELR 217
           GG  +  ++Y+T++CR +E++G+C++G KCQFAHG  ELR
Sbjct: 106 GGGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145

[Close]

BLAST of Spg031026 vs. ExPASy Swiss-Prot
Match: Q7ZXW9 (mRNA decay activator protein ZFP36L2-A OS=Xenopus laevis OX=8355 GN=zfp36l2-A PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.7e-07
Identity = 20/39 (51.28%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 178 GSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELR 217
           G+ +   +Y+T++CR +E+SG+C++G KCQFAHG  ELR
Sbjct: 124 GAQVNSTRYKTELCRPFEESGACKYGEKCQFAHGFHELR 162

[Close]

BLAST of Spg031026 vs. ExPASy Swiss-Prot
Match: A4IIN5 (mRNA decay activator protein ZFP36L2 OS=Xenopus tropicalis OX=8364 GN=zfp36l2 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 9.7e-07
Identity = 20/39 (51.28%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 178 GSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELR 217
           G+ +   +Y+T++CR +E+SG+C++G KCQFAHG  ELR
Sbjct: 123 GAQVNSTRYKTELCRPFEESGACKYGEKCQFAHGFHELR 161

[Close]

BLAST of Spg031026 vs. ExPASy Swiss-Prot
Match: P23950 (mRNA decay activator protein ZFP36L1 OS=Mus musculus OX=10090 GN=Zfp36l1 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 162 GGVKTIRSAVDSGSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELR 217
           GG + + +    GSG    +  ++Y+T++CR +E++G+C++G KCQFAHG  ELR
Sbjct: 94  GGERLLPTQKQPGSG---QVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELR 145

[Close]

BLAST of Spg031026 vs. ExPASy TrEMBL
Match: A0A6J1DKP7 (uncharacterized protein LOC111021811 OS=Momordica charantia OX=3673 GN=LOC111021811 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.2e-106
Identity = 202/235 (85.96%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTI-------L 60
           ME RQGKRSSKTSIIKGLN TVPPINIQMDNHLVIGGTGHYHQETN KSPT+       L
Sbjct: 1   MEGRQGKRSSKTSIIKGLNVTVPPINIQMDNHLVIGGTGHYHQETNCKSPTMLDRYSEKL 60

Query: 61  DRSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
           DRST IVRYFRSRSPV+GKLPSVGDTFS PV DVIN NYRSAI+NHYASSTS SSSFGSR
Sbjct: 61  DRSTSIVRYFRSRSPVIGKLPSVGDTFSTPVPDVINANYRSAIMNHYASSTSRSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
           GGGSSLSPLSAIENLETP  RSPQIYGTPVKVDEEVIVMD ILI+SVPGG KT+RSA +S
Sbjct: 121 GGGSSLSPLSAIENLETPTARSPQIYGTPVKVDEEVIVMDGILISSVPGGAKTMRSASES 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPKV 229
            +GGGS  GKN YRTDICRSWEDSGSCR+GHKCQFAHGKEELRPARLPVK+KPKV
Sbjct: 181 VTGGGSLSGKNLYRTDICRSWEDSGSCRYGHKCQFAHGKEELRPARLPVKNKPKV 235

[Close]

BLAST of Spg031026 vs. ExPASy TrEMBL
Match: A0A6J1IEX1 (uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472616 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 199/234 (85.04%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTIL------- 60
           MEDRQGKRSSK SIIKGLN TV PI IQMDNHLVIGGTGHYHQETNSK PTIL       
Sbjct: 1   MEDRQGKRSSKASIIKGLNPTVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
           DRSTPIV YFRSRSPVVGKLPS GDTFS PVADVIN +YRS+IINH+ASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSAGDTFSTPVADVINASYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
            GGSSLSPLSA+ENLET PVRSPQIYGTP+KV EEVIVMD ILI+SV GG KT++SA+DS
Sbjct: 121 RGGSSLSPLSALENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPK 228
           GSGGGSSL KNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRP  LPVK+KPK
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPVKTKPK 234

[Close]

BLAST of Spg031026 vs. ExPASy TrEMBL
Match: A0A6J1EQM3 (uncharacterized protein LOC111436579 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436579 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 199/234 (85.04%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTIL------- 60
           MEDRQGKRSSK S IKGLNATV PI IQMDNHLVIGGTGHYHQETNSK PTIL       
Sbjct: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
           DRSTPIV YFRSRSPVVGKLPSVGDTFS PVADVIN NYRS+IINH+ASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
            GGSSLSPLSAIENLET PVRSPQIYGTP+KV EEVIVMD ILI+SV GG KT++SA++S
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPK 228
           G GGGSSL KNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRP  LP+K+KPK
Sbjct: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK 234

[Close]

BLAST of Spg031026 vs. ExPASy TrEMBL
Match: A0A6J1ICT5 (mRNA decay activator protein ZFP36L2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472616 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 199/234 (85.04%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTIL------- 60
           MEDRQGKRSSK SIIKGLN TV PI IQMDNHLVIGGTGHYHQETNSK PTIL       
Sbjct: 1   MEDRQGKRSSKASIIKGLNPTVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
           DRSTPIV YFRSRSPVVGKLPS GDTFS PVADVIN +YRS+IINH+ASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSAGDTFSTPVADVINASYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
            GGSSLSPLSA+ENLET PVRSPQIYGTP+KV EEVIVMD ILI+SV GG KT++SA+DS
Sbjct: 121 RGGSSLSPLSALENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALDS 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPK 228
           GSGGGSSL KNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRP  LPVK+KPK
Sbjct: 181 GSGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPVKTKPK 234

[Close]

BLAST of Spg031026 vs. ExPASy TrEMBL
Match: A0A6J1EW18 (mRNA decay activator protein ZFP36L2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436579 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 199/234 (85.04%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 1   MEDRQGKRSSKTSIIKGLNATVPPINIQMDNHLVIGGTGHYHQETNSKSPTIL------- 60
           MEDRQGKRSSK S IKGLNATV PI IQMDNHLVIGGTGHYHQETNSK PTIL       
Sbjct: 1   MEDRQGKRSSKASTIKGLNATVRPIKIQMDNHLVIGGTGHYHQETNSKIPTILDRYAEKH 60

Query: 61  DRSTPIVRYFRSRSPVVGKLPSVGDTFSPPVADVINTNYRSAIINHYASSTSGSSSFGSR 120
           DRSTPIV YFRSRSPVVGKLPSVGDTFS PVADVIN NYRS+IINH+ASSTSGSSSFGSR
Sbjct: 61  DRSTPIVSYFRSRSPVVGKLPSVGDTFSTPVADVINANYRSSIINHFASSTSGSSSFGSR 120

Query: 121 GGGSSLSPLSAIENLETPPVRSPQIYGTPVKVDEEVIVMDAILIASVPGGVKTIRSAVDS 180
            GGSSLSPLSAIENLET PVRSPQIYGTP+KV EEVIVMD ILI+SV GG KT++SA++S
Sbjct: 121 RGGSSLSPLSAIENLETTPVRSPQIYGTPLKVHEEVIVMDEILISSVHGGAKTLKSALES 180

Query: 181 GSGGGSSLGKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPARLPVKSKPK 228
           G GGGSSL KNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRP  LP+K+KPK
Sbjct: 181 GGGGGSSLSKNQYRTDICRSWEDSGSCRFGHKCQFAHGKEELRPVHLPLKTKPK 234

[Close]

BLAST of Spg031026 vs. TAIR 10
Match: AT1G66810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 48.9 bits (115), Expect = 6.4e-06
Identity = 16/31 (51.61%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 187 RTDICRSWEDSGSCRFGHKCQFAHGKEELRP 218
           +T++C  W+++G+C +G  CQFAHG +ELRP
Sbjct: 234 KTELCNKWQETGACCYGDNCQFAHGIDELRP 264

[Close]

BLAST of Spg031026 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 48.5 bits (114), Expect = 8.4e-06
Identity = 26/61 (42.62%), Postives = 32/61 (52.46%), Query Frame = 0


Query: 162 GGVKTIRSAVDSGSGGGSSLGK-------NQYRTDICRSWEDSGSCRFGHKCQFAHGKEE 216
           GG  +  + V  G GGGS  G        + ++T IC  WE +G C FG KC FAHG  E
Sbjct: 230 GGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAE 289

[Close]

BLAST of Spg031026 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 48.5 bits (114), Expect = 8.4e-06
Identity = 16/31 (51.61%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 187 RTDICRSWEDSGSCRFGHKCQFAHGKEELRP 218
           +T++C  W+++G+C +G  CQFAHG +ELRP
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELRP 254

[Close]

BLAST of Spg031026 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 48.5 bits (114), Expect = 8.4e-06
Identity = 16/31 (51.61%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 187 RTDICRSWEDSGSCRFGHKCQFAHGKEELRP 218
           +T++C  W+++G+C +G  CQFAHG +ELRP
Sbjct: 223 KTELCNKWQETGTCPYGDHCQFAHGIKELRP 253

The following BLAST results are available for this feature:

BLAST of Spg031026 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154583.1	1.5e-105	85.96	uncharacterized protein LOC111021811 [Momordica charantia] >XP_022154584.1 uncha...	[more]
XP_023536047.1	7.4e-105	85.90	mRNA decay activator protein ZFP36L2-like isoform X2 [Cucurbita pepo subsp. pepo...	[more]
XP_023536031.1	7.4e-105	85.90	uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG7032491.1	2.8e-104	85.11	mRNA decay activator protein ZFP36L3, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_022974000.1	1.1e-103	85.04	mRNA decay activator protein ZFP36L2-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Spg031026 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ISE2	3.3e-07	54.76	mRNA decay activator protein ZFP36L3 OS=Mus musculus OX=10090 GN=Zfp36l3 PE=1 SV...	[more]
Q07352	7.4e-07	50.00	mRNA decay activator protein ZFP36L1 OS=Homo sapiens OX=9606 GN=ZFP36L1 PE=1 SV=...	[more]
Q7ZXW9	9.7e-07	51.28	mRNA decay activator protein ZFP36L2-A OS=Xenopus laevis OX=8355 GN=zfp36l2-A PE...	[more]
A4IIN5	9.7e-07	51.28	mRNA decay activator protein ZFP36L2 OS=Xenopus tropicalis OX=8364 GN=zfp36l2 PE...	[more]
P23950	1.6e-06	41.82	mRNA decay activator protein ZFP36L1 OS=Mus musculus OX=10090 GN=Zfp36l1 PE=1 SV...	[more]

BLAST of Spg031026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKP7	7.2e-106	85.96	uncharacterized protein LOC111021811 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1IEX1	5.2e-104	85.04	uncharacterized protein LOC111472616 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EQM3	5.2e-104	85.04	uncharacterized protein LOC111436579 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ICT5	5.2e-104	85.04	mRNA decay activator protein ZFP36L2-like isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EW18	5.2e-104	85.04	mRNA decay activator protein ZFP36L2-like isoform X2 OS=Cucurbita moschata OX=36...	[more]

BLAST of Spg031026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66810.1	6.4e-06	51.61	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G32360.1	8.4e-06	42.62	Zinc finger (CCCH-type) family protein	[more]
AT1G68200.1	8.4e-06	51.61	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.2	8.4e-06	51.61	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 185..212 e-value: 5.1E-6 score: 36.0
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 186..212 e-value: 2.0E-7 score: 30.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 185..213 score: 15.422161
None	No IPR available	GENE3D	4.10.1000.10		coord: 180..218 e-value: 1.1E-16 score: 61.9
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 9..228
None	No IPR available	PANTHER	PTHR12547:SF142	ZINC FINGER C-X8-C-X5-C-X3-H TYPE PROTEIN	coord: 9..228
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 185..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg031026.1	Spg031026.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding