Spg031023 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg031023
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold10: 22637495 .. 22642489 (+)
RNA-Seq ExpressionSpg031023
SyntenySpg031023
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCACTGAAGAAGCCAATAGACAAAAAGATAAGCTGAATTCTCAAACTTTGAATTCAGTTTATGCTAACCTTGTTGAATCTTCTACTGCATCAAAATACAGGTTTAAAAATAAAAACAAACAAGGTAATAAAGACAGATCATCGCATAAGAAGAACCATCATACAAGTCTCCTAACGGAAAAATAGAGAAGTTCAAGTTGATATGTGATGTCTGCGAAAAATCGGGGCACAAATCCTATCAGTGTAGCCAGAGGAAAGGGAAACCAGATCAGAAATCTGTTGGTGCACAAGCTAACGTTGTTGAAGCATACAATATCATTGTTGCAGTGGTGGTAGAAGTAAACTTGGTGGAAAACAAATCTGACTGGATTCTTGACACTGGTGTTTCAAGACACTTTTGCTCAAACTGAGGCCTGTTCCACGACTTCCAGGACACTGTTGACTGCGAATGCGTATACATGGGGAACTCAACCACAACTAGAGTACTTGGGAAATGGAAGGTTCTCTTGAAACTTACATCTGGAAAGACTTTATGTGAAAGGAGAGGCCAATGTGGCCCATTCCAAGAAGAAGTTCCTGAAGGGTTCATCCTCAGGAACTAAATCTGTACCTCAGGCTTCTTCATCGAAGCAAATTCAAAAGAGGAAGGGTGATAAGGGGAAGTCTCCTGCTCAGGCTGTTCAAGGTAAAGGAAAGGTCAAGGTCGTGGCTGATAAGGGCAAGTGCTTCCACTGCAATGTGGATGGTCACTAGAAGAGGAACTGTCGTCGTTACCTTGTTGAAAAGAAGAGAGAAAAGGAAGGTAAATACGATTTACTTGTTTTAGAAACTTGCCTTGTAGAATATGATGAGTTTGCCTGGATATTAGATTCTGGAGCCACTAATCATGTTTGTTCTTCTTTTCAGGGAAATGATTTCCAGCAGCGGAAAGATGGTGAAATGTCTCTCAAGGTTGGAACGGGAGAAGTCATTTCAGCAAGAGCTGTGGGAGCTGCTAAATTGTTTTTTAGGAATAAGTTTTTAATTTTGGAGGACTTGTATTTGGTTCCTAAAATTAAAAGGAATCTTATTTCTTTTTCTGCTTTGTTGGAACAAAGTTACTCTATTTCCTTTGTGATTAATGAAGCGATCATTTCAAGAAATGGTGTTCTTATATGTTCTGCTAAGGGTGAAAAGAATTTATGTGTTAAGACCTACCGATACTAAAGCTATTTTAAATCATGAGATGTTTAAAACCGCTGAAACTCAAAATAAAAGGCAAAAGATTTCTCTGTTAAGTAACAATACATATCTTTGGCACTTATTTCTTGGTCATATTAACATCGATCGGATCGGTCGTTTGGTGAAGAATGGACTTCTAACCGATTTAGAAGATGATTTTTTACCACCCTGTGGATCGTGTCTCGAGGGTAAAATGACTAAGAGGCCTTTTACTGGAAAAGGTTATCGTGCCAAAGAACCTCTTGAACTAATACATTCGGATCTTTGTGGTCTAATGAATGTAAAAGCTCGAGGAGGTTATGAATATTTCATCTCTTTCATAGATGATTATTCACGATATGATTACTTATACCTAATGGGTCATAAGTCTGAAGCTCTTGAAAAGTTTAAAGAGTTTAAGATTGAAGTAGAAAATCTATTAGGTAAAACAATTAAAACACTTCGATTAGATCGAGGTGGAGAGTATATGGATCAAAGATTCCAAGACTATATGATAGAACATGGAATCCAATCCCAACTCTTTGCACCTGGTACACCTCAGCAAAATGGTATATCAGAAAGGAGAAATAGAACCTTGTTAGACATGATTCGTTCAATGATGAGCTATGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATTCTAAACAATGTTCCCTCAAAAAGTGTTTTTGAAACACCTTTTGAGTTATGAAGGGGGCATAAACCTAGTTTGTGTTACTTCCGTATCTGGGGTTGTCCTGCACACGAGCTAATGACAAATCCTAAGAAACTGGAACCCCGTTCTAGAGTATGCATATTTTTGGATACCCTAAAGAAACGAGAGGTGGTCTTTTCTACGACCCTCAAGATAACAAAGTGTTTGTATCGACAAACGCTACTTTCTTGGAGGAAGACCACAATAGAGATCACAAACCACGTAGTTGCACGGATAAAAGGCTTAGCGCAACAGAAATGTTCAGAACCTTAACTCAGATTTTAATTTAGATTAAAATACCGATACGTTGGGAATAATATCACAGCAGTAAAATAAATTTAGGCTATTGTACAGCATGTATAAAGCATGCAAAATTCATCATAAAATCCTCTAGATCTAATCTAGAATGGATCCTAATGATCCAAGATCAAGAAACACATACCGTAGATGAAGTTCTTGATCGTTTCGCCAAATTCCCTTGGTTTTCCACCCAAAAACAGCAGCAAAAACACACCTTTTCTTGCTGGAAAAATATCACGAACACCACCAATAGATTGCACCGGTATCCTCTTGAAGGATATGCGTTAGGAGTGTTGGGTTTTATGCCCTAAAGCTCGTAGATAGTAAATGTAACTTTTTTCCGAACATTAACAAAATAGTTTATTTTGTTTGTATTTAGTAGATCTTGTCTTATTAACCCTAATCCAATAAACTAAACATCCTAGGCTGATAGTATGAGGCTTGAACTAGTATGTAGGGACATACGGGGATCAATGTTCAAGATTTAGCCTAAAGGGTCTATAGTATAGGGATAAGGCTGGGTACCTTATCGTGGTGACATTATGGATACAACCCGCTTTGTATCATGATACAAACGCAATGATCCAACGCGTTCATGTAGTTGACATGCGAGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACTGGATCGCGAAATAGTTAACCACTAATTGTAACACCGTTAGTTGGCTTGGTTTCTATTTCACTAGGATGACTTAGACAACTCGGTCTCAATCCTGAGTGGATTATGGACTCCTGTTCACAAGGGGTTGTCCTTTGATTTGTATGGGTGAGAGTGGCCAGCACGCCGACTCAATAAGCCTACCATTTTGGGGACAATACCGAGTGGGGAGCTGGGAACATAATCACACAAGATGGAATTCACTCCTTCCCGACTCTAGGGTAAGTAGAGGTGTGTTCCTTTAAGTGGTGTCTTCGGGACTTGAACAATGGGCCCAACCCTCTCTATGGCACGAGAGGGACTTCTGTTTGTTGGTTGGACCTCAAACAGGTTGTTCATTAGAGGAGCACTGGGGACTTAAGGACATAAATGTAAACCAGGGGTAAAACGAAAATTTGACCCAGCTGGCATACGAACACATGTGAAGGACTGACTTGTAGTATTGATCGATATCCGTGGATACAGAAATATTCTGCAGTGAGAAGAGTGCAGATGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATAGAAACTAACTTGGTTAATGAGTTTAAGCCGATTAGTCTCGTATCGTTGGAGCTTCTGATCTGCAGGTCCATTAGGTCCCACTGGTAGCTCGTAAAAAGACTTGAAACAAATAAATATAAATTGTAAATTGAAAGTGTTCAATTTATTTGGGAATCATATAATGTATATTGATGCATAAGAATATAAAGTTTATGAAACTGTATAATATATTTTTTGAATTAATTTCAAAAATTAATTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGAATTCATATTAATTTTAATTTTAATGAAATCCCTAAGATTAAATATATGATATTTAATTGGGTAATTAATTAATTATTTATTAAAATTAGAGACCTTTTCCTATTAGGAAAATGTCTTCCTTTTCCTATTAGGAAAAAGGTCTTGGCTTTTACTATATATAGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTGCTTCTCCTTCTCTCAGAGATCTCTCCCAAAAGACTCCCACAAGTCTCCTGCTTCAAGAAGTCTTAGAGATATACCGGTGTAGCCGATTGGTGGTGTTCGCACAAGAGGGTTGCTGCGTTTTCAATCTTATTGGCAAGAAAAGGCGAATTGATCAAGGCTTTCTACAAAAGTAAGTTTTCTATGAAATCCTTGATCACTAGGATCAATCTAGTTGATCATTTAGCATGTTTATAGCCTATATACAACCCATTAAATATAGATTTATTGCTGTAATATTTTGCAAATTGTATTGGTATTTCAATTAGAATCTAAGACTCTAAGTAGGTTCGGCAATTCCTTCCGCTGCGCAGGGCTTTTATCCCTTCAATTGGTATCAGAGCCAGCTGAGTTGTTCTTGATTTTTAATTGAAATTTGCAATTTGTTTATGTTAGGATTTGCATTATGAATGTTTAAATTTTGCTATGAACTAGAGGTTAATTGGCTTGAGATTTACAATTCTTGATTTGATCAAATGTAAAGGCCCCTGCGTTTTTGGGCATTTAAATTGTAAATTTCAAGTCTCTGTAAGTCCGGGTCTAGTATAGGTTGAAGAATGATGAAGATCGGGACCAAATTTGGCCAAAAACGACAGAAAACGACGAAGAACAGCGGCTGGAAATCGCAGAAAATCGAAAAAAAAAAATCGCGCTTCAGGATCAGGGCTGACTTCAGCGGAGGACTTGCTGATGTCATGAGGCGCGGTCCAGGTGAGGCGGTCCGATTTTTTGTGCGTGGTCCAGCGGTCCAGTGAAGGGGTTCGATTTTACGCGTGGTTCAGACGTCTAGAGAGCGGTTCGTTGACTGGTTTAGGCGGTTCGTTGACCAGGCGCGTGGTTCATTGAATTCTGGGTGGTTTTATGGCTGGTTCGTTGTCTGGGCAGCGGTTTTTGACTGGTTCAGTGTTTTTCCAGCTAGTTCAAGCGGTTTTGACCCATTTTTTGGTGGTTTTGACCCGGTTTGGACGTTTTTGGCACGTTTGGAGCGGTTTTGGTCCGGTTCGGAGATGCATAAGGCTGAATAG

mRNA sequence

ATGCGCACTGAAGAAGCCAATAGACAAAAAGATAAGCTGAATTCTCAAACTTTGAATTCAGTTTATGCTAACCTTGTTGAATCTTCTACTGCATCAAAATACAGGGATAAGGCTGGGTACCTTATCGTGGTGACATTATGGATACAACCCGCTTTGTATCATGATACAAACGCAATGATCCAACGCGTTCATGTAGTTGACATGCGAGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACTGGATCGCGAAATAGTCCATTAGGTCCCACTGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTGCTTCTCCTTCTCTCAGAGATCTCTCCCAAAAGACTCCCACAAGTCTCCTGCTTCAAGAAGTCTTAGAGATATACCGGTGTAGCCGATTGGTGGTGTTCGCACAAGAGGGTTGCTGCGTTTTCAATCTTATTGGCAAGAAAAGGCGAATTGATCAAGGCTTTCTACAAAAGATCAGGGCTGACTTCAGCGGAGGACTTGCTGATGTCATGAGGCGCGGTCCAGCGGTTTTTGACTGGTTCAGTGTTTTTCCAGCTAGTTCAAGCGGTTTTGACCCATTTTTTGGTGGTTTTGACCCGGTTTGGACGTTTTTGGCACGTTTGGAGCGGTTTTGGTCCGGTTCGGAGATGCATAAGGCTGAATAG

Coding sequence (CDS)

ATGCGCACTGAAGAAGCCAATAGACAAAAAGATAAGCTGAATTCTCAAACTTTGAATTCAGTTTATGCTAACCTTGTTGAATCTTCTACTGCATCAAAATACAGGGATAAGGCTGGGTACCTTATCGTGGTGACATTATGGATACAACCCGCTTTGTATCATGATACAAACGCAATGATCCAACGCGTTCATGTAGTTGACATGCGAGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACTGGATCGCGAAATAGTCCATTAGGTCCCACTGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTGCTTCTCCTTCTCTCAGAGATCTCTCCCAAAAGACTCCCACAAGTCTCCTGCTTCAAGAAGTCTTAGAGATATACCGGTGTAGCCGATTGGTGGTGTTCGCACAAGAGGGTTGCTGCGTTTTCAATCTTATTGGCAAGAAAAGGCGAATTGATCAAGGCTTTCTACAAAAGATCAGGGCTGACTTCAGCGGAGGACTTGCTGATGTCATGAGGCGCGGTCCAGCGGTTTTTGACTGGTTCAGTGTTTTTCCAGCTAGTTCAAGCGGTTTTGACCCATTTTTTGGTGGTTTTGACCCGGTTTGGACGTTTTTGGCACGTTTGGAGCGGTTTTGGTCCGGTTCGGAGATGCATAAGGCTGAATAG

Protein sequence

MRTEEANRQKDKLNSQTLNSVYANLVESSTASKYRDKAGYLIVVTLWIQPALYHDTNAMIQRVHVVDMRVGVSYAMSLHKTGSRNSPLGPTGPLGWGERHPIASPSLRDLSQKTPTSLLLQEVLEIYRCSRLVVFAQEGCCVFNLIGKKRRIDQGFLQKIRADFSGGLADVMRRGPAVFDWFSVFPASSSGFDPFFGGFDPVWTFLARLERFWSGSEMHKAE
Homology
[Close]
BLAST of Spg031023 vs. ExPASy TrEMBL
Match: A0A6J1DXB7 (uncharacterized protein LOC111024362 OS=Momordica charantia OX=3673 GN=LOC111024362 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.5e-04
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 1   MRTEEANRQKDKLNSQTLNSVYANLVESSTASKYRDK 38
           MRTEEANRQKDKL+SQ+LNSV ANLVESS+A K R K
Sbjct: 190 MRTEEANRQKDKLSSQSLNSVKANLVESSSAFKDRFK 226

The following BLAST results are available for this feature:
BLAST of Spg031023 vs.
Match NameE-valueIdentityDescription
BLAST of Spg031023 vs.
Match NameE-valueIdentityDescription
BLAST of Spg031023 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DXB77.5e-0481.08uncharacterized protein LOC111024362 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
BLAST of Spg031023 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg031023.1Spg031023.1mRNA