Spg031022 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg031022
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein of unknown function (DUF3511)
Location	scaffold10: 22957994 .. 22958546 (-)
RNA-Seq Expression	Spg031022
Synteny	Spg031022

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGGAAGGGATCCACCGTCGCCCGAACAAGGGCGGCAGGAGCCTGGAAATCATAGACGTGAGGAAACTAAGTGAAAACAAGATGTCCTTGGACCAATCACGTGAAAACAAGATGTCCTTGGACCAATCACGCCCACGAGCCATCTCGAATCGATTGCCGGAGAAACGACATGTGATCAAGTCATCAGAATCGTCGAAAAGCTCAAGAAATTTATGGTGGAAGAACTCGGAAATGAAGAGACGACAACGCGTCGCAAAGTACAAGTATTATACAGTGGAAGGGAAGGTAAAGGATTCCCTAAAGAAAGGGATCAACTGGTTCAAGATCAGGTGTTGCAGAATCATATCTGGGTTTTGATAGAATCTTAATGATGTTTTTTTTCTTTTGTGAGGAAAAAGCTTCAACTTCCATGGCCTTTTCTTGTTCTCTTTTTATGGATATGGTTTTGAAACATAGGACGGTTCATCATGAAGTTATCAATGCTTTGTCTTTCGTTGTCTACATGCCCTTGTGTTTGTTTGGTTTGTTATCCTCTATTTGGATATGA

mRNA sequence

ATGTCGATGGAAGGGATCCACCGTCGCCCGAACAAGGGCGGCAGGAGCCTGGAAATCATAGACGTGAGGAAACTAAGTGAAAACAAGATGTCCTTGGACCAATCACGTGAAAACAAGATGTCCTTGGACCAATCACGCCCACGAGCCATCTCGAATCGATTGCCGGAGAAACGACATGTGATCAAGTCATCAGAATCGTCGAAAAGCTCAAGAAATTTATGGTGGAAGAACTCGGAAATGAAGAGACGACAACGCGTCGCAAAGTACAAGTATTATACAGTGGAAGGGAAGGTAAAGGATTCCCTAAAGAAAGGGATCAACTGGTTCAAGATCAGGACGGTTCATCATGAAGTTATCAATGCTTTGTCTTTCGTTGTCTACATGCCCTTGTGTTTGTTTGGTTTGTTATCCTCTATTTGGATATGA

Coding sequence (CDS)

ATGTCGATGGAAGGGATCCACCGTCGCCCGAACAAGGGCGGCAGGAGCCTGGAAATCATAGACGTGAGGAAACTAAGTGAAAACAAGATGTCCTTGGACCAATCACGTGAAAACAAGATGTCCTTGGACCAATCACGCCCACGAGCCATCTCGAATCGATTGCCGGAGAAACGACATGTGATCAAGTCATCAGAATCGTCGAAAAGCTCAAGAAATTTATGGTGGAAGAACTCGGAAATGAAGAGACGACAACGCGTCGCAAAGTACAAGTATTATACAGTGGAAGGGAAGGTAAAGGATTCCCTAAAGAAAGGGATCAACTGGTTCAAGATCAGGACGGTTCATCATGAAGTTATCAATGCTTTGTCTTTCGTTGTCTACATGCCCTTGTGTTTGTTTGGTTTGTTATCCTCTATTTGGATATGA

Protein sequence

MSMEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQSRENKMSLDQSRPRAISNRLPEKRHVIKSSESSKSSRNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIRTVHHEVINALSFVVYMPLCLFGLLSSIWI

Homology

[Close]

BLAST of Spg031022 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 7.0e-26
Identity = 72/110 (65.45%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 3   MEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQSRENKMSLDQSRPRAISNRLPEKRHVIK 62
           MEGIHRRP KGGRSLEIIDVR LSENK+SL QSR        SR     +   +++ + K
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSR--------SRAAVDPSPSTKRQAIKK 60

Query: 63  SSESSKSSRNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
            SESSKSS   WWKN EMKRR+RVAKYK YTVEGKVK+S+KKGI WFK R
Sbjct: 61  PSESSKSSVKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTR 102

[Close]

BLAST of Spg031022 vs. NCBI nr
Match: KAA0032381.1 (hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ96369.1 hypothetical protein E5676_scaffold1159G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 2.0e-25
Identity = 73/115 (63.48%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   MSMEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQSRENKMSLDQS--RPRAISNRLPEKR 60
           M+ME +HRRPNKG R+L+IIDVRKLSENKM L+QSR +  ++D S  +PRAI        
Sbjct: 1   MTMERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHS-TIDPSSMKPRAIKT------ 60

Query: 61  HVIKSSESSKSSR-NLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
               +SESSK+S   LWWKNSEMKRR+RVAKYK YTVEG+VK+S++KGINWFK R
Sbjct: 61  ----TSESSKASTVKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCR 104

[Close]

BLAST of Spg031022 vs. NCBI nr
Match: KAG7017168.1 (hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115.2 bits (287), Expect = 4.7e-22
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 3   MEGIHRRPNK-GGRSLEIIDVRKLSENKMSLDQSRENKMSLDQSRPRAISNRLPEKRHVI 62
           MEG+HRRP+K GGRSLE+IDVRKLSEN++ L QSR         RP A+     + R V+
Sbjct: 1   MEGVHRRPSKGGGRSLEVIDVRKLSENQVHLSQSR---------RPAAMDPSAVKPR-VV 60

Query: 63  KSSESSK-SSRNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
           K+ E S+  S N WWKN EMKR++RVAKYK YTVEG+VKDS+KKG+ WFK R
Sbjct: 61  KTGEGSRGGSGNSWWKNPEMKRQRRVAKYKLYTVEGRVKDSIKKGMRWFKSR 102

[Close]

BLAST of Spg031022 vs. NCBI nr
Match: KGN61447.1 (hypothetical protein Csa_006051 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 8.9e-21
Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 3   MEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQS-RENKMSLDQSRPRAISNRLPEKRHVI 62
           MEG+HRRPNKG R+L IIDVRKLSENK+ L+QS R++ M+    +PR +           
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKT--------- 98

Query: 63  KSSESSKSS-RNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
            +SESSK+S    W K  E+KRR+RVAKYK YTVEGKVKDS++KGINWFK +
Sbjct: 99  -ASESSKTSGGKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCK 140

[Close]

BLAST of Spg031022 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 9.8e-20
Identity = 62/111 (55.86%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 3   MEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQSRENKMSLDQSRPRAISNRLPEKRHVIK 62
           MEG+H  PNKGGRSLE+IDVRKLS NK+ L+QS+           R + +    K++V K
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQR----------RTVVDPSFVKQYVTK 60

Query: 63  SSESSKS-SRNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
           +SE SKS  +  WWK  EM+RRQRVAKYK Y VEGKVK S+KKGI W K +
Sbjct: 61  TSEPSKSCMKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTK 101

[Close]

BLAST of Spg031022 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.4e-26
Identity = 72/110 (65.45%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 3   MEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQSRENKMSLDQSRPRAISNRLPEKRHVIK 62
           MEGIHRRP KGGRSLEIIDVR LSENK+SL QSR        SR     +   +++ + K
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSR--------SRAAVDPSPSTKRQAIKK 60

Query: 63  SSESSKSSRNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
            SESSKSS   WWKN EMKRR+RVAKYK YTVEGKVK+S+KKGI WFK R
Sbjct: 61  PSESSKSSVKSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTR 102

[Close]

BLAST of Spg031022 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 9.9e-26
Identity = 73/115 (63.48%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   MSMEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQSRENKMSLDQS--RPRAISNRLPEKR 60
           M+ME +HRRPNKG R+L+IIDVRKLSENKM L+QSR +  ++D S  +PRAI        
Sbjct: 1   MTMERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHS-TIDPSSMKPRAIKT------ 60

Query: 61  HVIKSSESSKSSR-NLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
               +SESSK+S   LWWKNSEMKRR+RVAKYK YTVEG+VK+S++KGINWFK R
Sbjct: 61  ----TSESSKASTVKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCR 104

[Close]

BLAST of Spg031022 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 4.3e-21
Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 3   MEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQS-RENKMSLDQSRPRAISNRLPEKRHVI 62
           MEG+HRRPNKG R+L IIDVRKLSENK+ L+QS R++ M+    +PR +           
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKT--------- 98

Query: 63  KSSESSKSS-RNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
            +SESSK+S    W K  E+KRR+RVAKYK YTVEGKVKDS++KGINWFK +
Sbjct: 99  -ASESSKTSGGKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCK 140

[Close]

BLAST of Spg031022 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 4.8e-20
Identity = 62/111 (55.86%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 3   MEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQSRENKMSLDQSRPRAISNRLPEKRHVIK 62
           MEG+H  PNKGGRSLE+IDVRKLS NK+ L+QS+           R + +    K++V K
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQR----------RTVVDPSFVKQYVTK 60

Query: 63  SSESSKS-SRNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
           +SE SKS  +  WWK  EM+RRQRVAKYK Y VEGKVK S+KKGI W K +
Sbjct: 61  TSEPSKSCMKKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTK 101

[Close]

BLAST of Spg031022 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 6.2e-20
Identity = 61/110 (55.45%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 3   MEGIHRRPNKGGRSLEIIDVRKLSENKMSLDQSRENKMSLDQSRPRAISNRLPEKRHVIK 62
           MEG+H   NKGGRSLE++DVRKLSENKM L+QS+           R + +    KR+V K
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQR----------RTVVDPSFVKRYVTK 60

Query: 63  SSESSKSSRNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
           + E SK  ++ WWK  EMKRRQRVAKYK Y VEGKVK S+KKG  W K +
Sbjct: 61  TWEPSKMKKS-WWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTK 99

[Close]

BLAST of Spg031022 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 48.5 bits (114), Expect = 5.1e-06
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 64  SESSKSSRNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFK 111
           S +S S R     ++EMKR++R+A+YK YTVEGKVK +LK G  W K
Sbjct: 54  SNASSSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIK 100

[Close]

BLAST of Spg031022 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 48.1 bits (113), Expect = 6.6e-06
Identity = 35/103 (33.98%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 12  KGGRSLEIIDVR--KLSENKMSLDQSRENKMSLDQSRPRAISNRLPEKRHVIKSSESSKS 71
           +G R+L++++    KL      + +SR N+  +     R +S +    R    SS S+  
Sbjct: 16  EGDRNLQLVNPADLKLVRGIYVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLF 75

Query: 72  SRNLWWKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIR 113
               WW + E+KR++RVAKYK Y+ EGK+K +L+K   W KI+
Sbjct: 76  KG--WWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQ 116

[Close]

BLAST of Spg031022 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 45.8 bits (107), Expect = 3.3e-05
Identity = 20/39 (51.28%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 77  NSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFKIRTVH 116
           ++E KR++R+A YK Y +EGKVK ++KKG +W K R  H
Sbjct: 68  DAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSH 106

[Close]

BLAST of Spg031022 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 42.4 bits (98), Expect = 3.6e-04
Identity = 24/59 (40.68%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 53  RLPEKRHVIKSSESSKSSRNLW-WKNSEMKRRQRVAKYKYYTVEGKVKDSLKKGINWFK 111
           R+PE ++  K   SS SS   W + + +++R++RV  Y+ YTVEGK+K S +K   W K
Sbjct: 53  RIPEDQNPKKGRSSSSSS---WGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIK 108

The following BLAST results are available for this feature:

BLAST of Spg031022 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151002.1	7.0e-26	65.45	uncharacterized protein LOC111019023 [Momordica charantia]	[more]
KAA0032381.1	2.0e-25	63.48	hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ963...	[more]
KAG7017168.1	4.7e-22	59.82	hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN61447.1	8.9e-21	58.04	hypothetical protein Csa_006051 [Cucumis sativus]	[more]
KGN56136.1	9.8e-20	55.86	hypothetical protein Csa_009524 [Cucumis sativus]	[more]

BLAST of Spg031022 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg031022 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCB3	3.4e-26	65.45	uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5D3BBI7	9.9e-26	63.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LL30	4.3e-21	58.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1	[more]
A0A0A0L7N5	4.8e-20	55.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1	[more]
A0A5D3BTT8	6.2e-20	55.45	DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9...	[more]

BLAST of Spg031022 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47480.1	5.1e-06	53.19	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	6.6e-06	33.98	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	3.3e-05	51.28	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	3.6e-04	40.68	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 75..114 e-value: 3.1E-17 score: 62.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..49
None	No IPR available	PANTHER	PTHR33193:SF33	BNAANNG02720D PROTEIN	coord: 10..114
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 10..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg031022.1	Spg031022.1	mRNA