Spg030969 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030969
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase
Location	scaffold10: 22182930 .. 22186304 (+)
RNA-Seq Expression	Spg030969
Synteny	Spg030969

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGAGAGTGCTGGGCGGGCCCCACTTGTAAACCCGAGAGTTTCCCTTAGATAATTTTCTCTTATCATCTATTGTGGCTTCTTGGTTGAATCTAAGTTGTTGGAAATTATACACTTAAAAAGAAAGGAGATGGGAAAGAAGAAAAGAAAATAAATGGAAAAGGAAAAGGAAAAGGAAAAAGGAAAAAAAAAAAAAAGAAAAGAAATGAAGTGGGAATGGACAGCAAGAAGGGCACCACCGACTAGCATTCTTATCAGCCCATTATCAGCCTCATTTCTCATCCTTTTCCACTAAAACTTTCAGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAATCAAGAGGTGAGGTTTGATTTTCTTGAACGTTAGTTCATTTTCTAACAAATTGCATGAAGGAAGCTTGACCTAAATCGTATGAGAAGTTGATGGTTTTTGGAATGGAAAACAGAGCACAGGATTGTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGAGTATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTATCTACAACTTTCATGAAGAATTCGTGAGCCAAAAATGACTTGAAGTAGGTTTAATTTCAGGAGGAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGAAACATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAGTAGAATATGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTCTTGGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGAACTAGATAAGACAGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTGCTCATGTTTAGACGTTTTATATGCTTTACCATGAATGATATATGATTTTTATGAACGATTTCAAGCATAAGTTCTGAGCTCAGATTTTCTAACGAGGTTTATATATGAGCACGTGGCTAATGGCTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGTAAAGTATGGATTAGCAAGTACTTTTAAACGATTTCCAGTTTTCCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGAAAAGCAGGCATGTTTTAATGTTTCCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATATACTTGATATGCCTTGCTAGATTTTAATGACGAACTTGCGAGATATTTTAGAAAGCCTTTTTCATTACACGTTTATGTTAAACGCTTGAATTGAACATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCAGATTTAGAGTTTTAAAATTAGTCACTCACTGGGCTTCGTAGCTCATTTTTCAAAATGTTTTCCACTTTTCAGGTAGAGATCGAGCTCTCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTATAATATCGTCCTAGAGGTCGTGGATGTATAAACCCTAGTTGTATATGTTTTTGGTTGTGACATCTATATCAGGTTATTATCCGAACCAAGTTATGTCAGGGCGGCACCTCGTGTTTGTTGGGAGTTTTTTTCCAGGGATTCCGCTGTGTTCTGTTTCATGTAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAGCGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTTGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACACCACTACATCGTAGGACTAGTAAACATTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGATACCTTGCTAGATTTTTAATGACGAACTTGCGAGATATTTTAGAAAGCCTTTTTCATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTGACTTCCAGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATCGGATAATATAGCCCTAGAGGTCGTGGTTGTATAAACCCTAGTTGTATATGATTTTGGTTGTGATACCTATATCAGGTTATTATCCGAACCAAGTTATGTCAGGGCGGCACCTCATGTTTGTTAAAAGTTTTTTTCCAGGGATTCCGCTGTGTTCTGTTTCATGTAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGAACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAACAGGTGGTCCGGGAGGGGGTGTGACATGTGTGCCGCAACCCTCTCTTGCCAGCTTGCACATCAATCATACGTCAGGGCAACCATCGCTCCAGCTATCATTGTACGAATTATGCTCTGGGATCTGCGCCTATGTTGAAGAAAACTTGGGCAAGGAAACAACTACAATTTCATGCGTTAGCGGGTAA

mRNA sequence

ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTAGAGATCGAGCTCTCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTCAGCGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTTGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACACCACTACATCGTAGGACTAGTAAACATTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGAACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAACAGGTGGTCCGGGAGGGGGTGTGACATGTGTGCCGCAACCCTCTCTTGCCAGCTTGCACATCAATCATACGTCAGGGCAACCATCGCTCCAGCTATCATTGTACGAATTATGCTCTGGGATCTGCGCCTATGTTGAAGAAAACTTGGGCAAGGAAACAACTACAATTTCATGCGTTAGCGGGTAA

Coding sequence (CDS)

ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTAGAGATCGAGCTCTCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTCAGCGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTTGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACACCACTACATCGTAGGACTAGTAAACATTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGAACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAACAGGTGGTCCGGGAGGGGGTGTGACATGTGTGCCGCAACCCTCTCTTGCCAGCTTGCACATCAATCATACGTCAGGGCAACCATCGCTCCAGCTATCATTGTACGAATTATGCTCTGGGATCTGCGCCTATGTTGAAGAAAACTTGGGCAAGGAAACAACTACAATTTCATGCGTTAGCGGGTAA

Protein sequence

MTEILSPRLYGTVCTQVSCRVFENEEFDVYFINFGSVLRKLWVLEVRVEIELSVPDTLPTSAESSRSSSSTWFSVQEGQRVSLEEDDVRWLHAIFWAKLAGGPGGGVTPLHRRTSKHWLYWACPTQRRSVMLVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEENDVRWLHAIFRAKLTGGPGGGVTCVPQPSLASLHINHTSGQPSLQLSLYELCSGICAYVEENLGKETTTISCVSG

Homology

[Close]

BLAST of Spg030969 vs. NCBI nr
Match: KAA0065516.1 (uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-20
Identity = 68/128 (53.12%), Postives = 72/128 (56.25%), Query Frame = 0


Query: 100 AGGP------GGGV-TPLHRRTSKHWLYWACPTQRRSVML----------VEIELPVPDT 159
           AGGP      G  V  PLHRRTSK WLYWACPT RRSVML          VEIEL VPDT
Sbjct: 555 AGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDT 614

Query: 160 LPTSAESSRSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEENDVRWLHAIFRAKLTGGP 211
           LPTSAESS S+S         S  IV                +DV WLH +FRAK TGGP
Sbjct: 615 LPTSAESSESNS--------RSAGIV--------------RGDDVCWLHVVFRAKTTGGP 660

[Close]

BLAST of Spg030969 vs. NCBI nr
Match: TYJ98800.1 (uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-20
Identity = 68/128 (53.12%), Postives = 72/128 (56.25%), Query Frame = 0


Query: 100 AGGP------GGGV-TPLHRRTSKHWLYWACPTQRRSVML----------VEIELPVPDT 159
           AGGP      G  V  PLHRRTSK WLYWACPT RRSVML          VEIEL VPDT
Sbjct: 141 AGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDT 200

Query: 160 LPTSAESSRSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEENDVRWLHAIFRAKLTGGP 211
           LPTSAESS S+S         S  IV                +DV WLH +FRAK TGGP
Sbjct: 201 LPTSAESSESNS--------RSAGIV--------------RGDDVCWLHVVFRAKTTGGP 246

[Close]

BLAST of Spg030969 vs. NCBI nr
Match: TYK27998.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-19
Identity = 84/210 (40.00%), Postives = 104/210 (49.52%), Query Frame = 0


Query: 1   MTEILSPRLYGTVCTQVSCRVFENEEFDVYFINFGSVLRKLWVLEVRVEIELSVPDTLPT 60
           MTEILSPRLYGTVCTQV           ++ ++  SVLR     +  VEIEL VPDTLPT
Sbjct: 1   MTEILSPRLYGTVCTQV-----------IFPLSTLSVLRD---NDAVVEIELPVPDTLPT 60

Query: 61  SAESSRSSSSTWFSVQ-EGQRVSL-------EEDDVRWLHAIFWAKLAGGPGGGVTPLHR 120
           SAESS S+SSTW  +  E   V +        EDDV WLHA+F AK AGGPGGGV P   
Sbjct: 61  SAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGGVMP--- 120

Query: 121 RTSKHWLYWACPTQRRSVMLVEIELPVPDTL--PTSAESSRSSSSTWVELYIESVHIVNV 180
                      PT +R         P  D +  PT  +S R SS+   +  +ES      
Sbjct: 121 ----------PPTSKR-------RRPNQDGMQYPTQGQSERGSSTPRGQNEVESERFARS 174

Query: 181 LFNVQEGQRVSLEENDVRWLHAIFRAKLTG 201
              +   +R     +D   ++ I R K  G
Sbjct: 181 AQEISRPERA--RPSDPEKMYGIERLKKLG 174

[Close]

BLAST of Spg030969 vs. NCBI nr
Match: KAA0066851.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-19
Identity = 84/210 (40.00%), Postives = 104/210 (49.52%), Query Frame = 0


Query: 1   MTEILSPRLYGTVCTQVSCRVFENEEFDVYFINFGSVLRKLWVLEVRVEIELSVPDTLPT 60
           MTEILSPRLYGTVCTQV           ++ ++  SVLR     +  VEIEL VPDTLPT
Sbjct: 1   MTEILSPRLYGTVCTQV-----------IFPLSTLSVLRD---NDAVVEIELPVPDTLPT 60

Query: 61  SAESSRSSSSTWFSVQ-EGQRVSL-------EEDDVRWLHAIFWAKLAGGPGGGVTPLHR 120
           SAESS S+SSTW  +  E   V +        EDDV WLHA+F AK AGGPGGGV P   
Sbjct: 61  SAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGGVMP--- 120

Query: 121 RTSKHWLYWACPTQRRSVMLVEIELPVPDTL--PTSAESSRSSSSTWVELYIESVHIVNV 180
                      PT +R         P  D +  PT  +S R SS+   +  +ES      
Sbjct: 121 ----------PPTSKR-------RRPNQDGMQYPTQGQSERGSSTPRGQNEVESERFARS 174

Query: 181 LFNVQEGQRVSLEENDVRWLHAIFRAKLTG 201
              +   +R     +D   ++ I R K  G
Sbjct: 181 AQEISRPERA--RPSDPEKMYGIERLKKLG 174

[Close]

BLAST of Spg030969 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 2.0e-18
Identity = 76/202 (37.62%), Postives = 97/202 (48.02%), Query Frame = 0


Query: 40  KLWVLEVRVEIELSVPDTLPTSAESSRSSSSTWFSVQEGQRVSLEEDDVRWLHAIFWAKL 99
           +LWVLEVR+                   S+     +  G R+SL+ +++        + L
Sbjct: 66  QLWVLEVRI-------------------SNLENLEMPRGNRLSLQTEEIDKTVIFPLSTL 125

Query: 100 A------GGPGGGVTPLHRRTSKHWLYWACPT-------QRRSVMLVEIELPVPDTLPTS 159
           +           G  PL +R       W C T       +  S  LVEIELPVPD LPTS
Sbjct: 126 SVLSDNDAVVSAGQAPLRQRR------WECRTGPTTSFFKMFSTFLVEIELPVPDILPTS 185

Query: 160 AESSRSSSSTWVELYIESVHI---VNVLFNVQEGQRVSL------EENDVRWLHAIFRAK 219
           AESSRS+SSTW+ELY ESVH+     V+   +  Q   L        +DV WLHAIFRAK
Sbjct: 186 AESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVRGDDVCWLHAIFRAK 242

[Close]

BLAST of Spg030969 vs. ExPASy TrEMBL
Match: A0A5A7VGQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00090 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-20
Identity = 68/128 (53.12%), Postives = 72/128 (56.25%), Query Frame = 0


Query: 100 AGGP------GGGV-TPLHRRTSKHWLYWACPTQRRSVML----------VEIELPVPDT 159
           AGGP      G  V  PLHRRTSK WLYWACPT RRSVML          VEIEL VPDT
Sbjct: 555 AGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDT 614

Query: 160 LPTSAESSRSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEENDVRWLHAIFRAKLTGGP 211
           LPTSAESS S+S         S  IV                +DV WLH +FRAK TGGP
Sbjct: 615 LPTSAESSESNS--------RSAGIV--------------RGDDVCWLHVVFRAKTTGGP 660

[Close]

BLAST of Spg030969 vs. ExPASy TrEMBL
Match: A0A5D3BG85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1625G00140 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-20
Identity = 68/128 (53.12%), Postives = 72/128 (56.25%), Query Frame = 0


Query: 100 AGGP------GGGV-TPLHRRTSKHWLYWACPTQRRSVML----------VEIELPVPDT 159
           AGGP      G  V  PLHRRTSK WLYWACPT RRSVML          VEIEL VPDT
Sbjct: 141 AGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDT 200

Query: 160 LPTSAESSRSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEENDVRWLHAIFRAKLTGGP 211
           LPTSAESS S+S         S  IV                +DV WLH +FRAK TGGP
Sbjct: 201 LPTSAESSESNS--------RSAGIV--------------RGDDVCWLHVVFRAKTTGGP 246

[Close]

BLAST of Spg030969 vs. ExPASy TrEMBL
Match: A0A5D3DX39 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002140 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 84/210 (40.00%), Postives = 104/210 (49.52%), Query Frame = 0


Query: 1   MTEILSPRLYGTVCTQVSCRVFENEEFDVYFINFGSVLRKLWVLEVRVEIELSVPDTLPT 60
           MTEILSPRLYGTVCTQV           ++ ++  SVLR     +  VEIEL VPDTLPT
Sbjct: 1   MTEILSPRLYGTVCTQV-----------IFPLSTLSVLRD---NDAVVEIELPVPDTLPT 60

Query: 61  SAESSRSSSSTWFSVQ-EGQRVSL-------EEDDVRWLHAIFWAKLAGGPGGGVTPLHR 120
           SAESS S+SSTW  +  E   V +        EDDV WLHA+F AK AGGPGGGV P   
Sbjct: 61  SAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGGVMP--- 120

Query: 121 RTSKHWLYWACPTQRRSVMLVEIELPVPDTL--PTSAESSRSSSSTWVELYIESVHIVNV 180
                      PT +R         P  D +  PT  +S R SS+   +  +ES      
Sbjct: 121 ----------PPTSKR-------RRPNQDGMQYPTQGQSERGSSTPRGQNEVESERFARS 174

Query: 181 LFNVQEGQRVSLEENDVRWLHAIFRAKLTG 201
              +   +R     +D   ++ I R K  G
Sbjct: 181 AQEISRPERA--RPSDPEKMYGIERLKKLG 174

[Close]

BLAST of Spg030969 vs. ExPASy TrEMBL
Match: A0A5A7VMG9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002220 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 84/210 (40.00%), Postives = 104/210 (49.52%), Query Frame = 0


Query: 1   MTEILSPRLYGTVCTQVSCRVFENEEFDVYFINFGSVLRKLWVLEVRVEIELSVPDTLPT 60
           MTEILSPRLYGTVCTQV           ++ ++  SVLR     +  VEIEL VPDTLPT
Sbjct: 1   MTEILSPRLYGTVCTQV-----------IFPLSTLSVLRD---NDAVVEIELPVPDTLPT 60

Query: 61  SAESSRSSSSTWFSVQ-EGQRVSL-------EEDDVRWLHAIFWAKLAGGPGGGVTPLHR 120
           SAESS S+SSTW  +  E   V +        EDDV WLHA+F AK AGGPGGGV P   
Sbjct: 61  SAESSESNSSTWLELYVEFVHVEMFWLAGIVREDDVCWLHAVFRAKTAGGPGGGVMP--- 120

Query: 121 RTSKHWLYWACPTQRRSVMLVEIELPVPDTL--PTSAESSRSSSSTWVELYIESVHIVNV 180
                      PT +R         P  D +  PT  +S R SS+   +  +ES      
Sbjct: 121 ----------PPTSKR-------RRPNQDGMQYPTQGQSERGSSTPRGQNEVESERFARS 174

Query: 181 LFNVQEGQRVSLEENDVRWLHAIFRAKLTG 201
              +   +R     +D   ++ I R K  G
Sbjct: 181 AQEISRPERA--RPSDPEKMYGIERLKKLG 174

[Close]

BLAST of Spg030969 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.7e-19
Identity = 76/202 (37.62%), Postives = 97/202 (48.02%), Query Frame = 0


Query: 40  KLWVLEVRVEIELSVPDTLPTSAESSRSSSSTWFSVQEGQRVSLEEDDVRWLHAIFWAKL 99
           +LWVLEVR+                   S+     +  G R+SL+ +++        + L
Sbjct: 66  QLWVLEVRI-------------------SNLENLEMPRGNRLSLQTEEIDKTVIFPLSTL 125

Query: 100 A------GGPGGGVTPLHRRTSKHWLYWACPT-------QRRSVMLVEIELPVPDTLPTS 159
           +           G  PL +R       W C T       +  S  LVEIELPVPD LPTS
Sbjct: 126 SVLSDNDAVVSAGQAPLRQRR------WECRTGPTTSFFKMFSTFLVEIELPVPDILPTS 185

Query: 160 AESSRSSSSTWVELYIESVHI---VNVLFNVQEGQRVSL------EENDVRWLHAIFRAK 219
           AESSRS+SSTW+ELY ESVH+     V+   +  Q   L        +DV WLHAIFRAK
Sbjct: 186 AESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWIVRGDDVCWLHAIFRAK 242

The following BLAST results are available for this feature:

BLAST of Spg030969 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065516.1	3.6e-20	53.13	uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]	[more]
TYJ98800.1	3.6e-20	53.13	uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]	[more]
TYK27998.1	2.4e-19	40.00	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0066851.1	2.4e-19	40.00	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0037581.1	2.0e-18	37.62	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Spg030969 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg030969 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGQ5	1.8e-20	53.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BG85	1.8e-20	53.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DX39	1.1e-19	40.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38...	[more]
A0A5A7VMG9	1.1e-19	40.00	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5D3BTP3	9.7e-19	37.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]

BLAST of Spg030969 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030969.1	Spg030969.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016740	transferase activity