Spg030941 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030941
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Locationscaffold11: 25969911 .. 25971623 (+)
RNA-Seq ExpressionSpg030941
SyntenySpg030941
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTGCCCTTCACTGACGAGATAATGGGAGGGGAGGTGCCACATAAATTTAAGGTGTCAAACTTCCCACAGTATGATGGAAAGAAGGACCCGAAGCAGCATCTAGACGCATATTTAACGTGGATGGACTTCCATGGGGCGAATGAAGCAACAAGATGTCGGGCGTTCGCACTAACGCTTACTGGTTTGGCGAGACAATGGTTCAGCAAAATATCGCGGAAATCAATCGGCTCGTTCAAAGAATTGGCCCGAGCATTCGTTACGCAATTTTTAGGCGCCCGGAGCATGCAGAAGCCCTAGATCAACCTACTGACAGTAAAACAGGGGTTGCGGGAAAGCTTGAAGGATTACATTAACCGATTCAGCAACGAGGTTTTGCAGGTAGAAGGTTATGACGACGGAGTCGCCTTGACTGCAGTGATCTCGGGTTTGCAAGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAACCACGAACGTATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTCAAGTCCAAGCAGGAAGAAAGAGAGAGTCGAGGAGTTTCTTTATCCAACCGGCATCGAGAGGATCTGGCAAAGGGGCTCCAAGTCGATGATAGAAGCCGAGGTCGACATTAGTAGTCCTCGGCCAATGGTCGAGGCCGAGCAGAAGCCAAGGATCTGCGGGGCCGTGTAGAGCCGAAAGCCAAGTTCGACAGGTATACCCCACTAACGACTTCACTTGAACAGGTTTTGGCCGCGATACAGGATACGCACCTACTAAAACGTCTGAAAAGGCTGAGGTCGGACCCAGACAGGAGAAACCAAAACAAGTATTGCATGTTCCATGGAGACCACGGTCACACAACTCGAGAGTGCATACAGCTAAGGGATGAGATAGAAACCCTAATTCGAGAGGGTTACCTCAAGGAGTTCGTGGGACATGATAGGGGGAAGAGGCTAGCGCAGACAGAGCCAGGCAAGGGGGGCAACAACCCACCGCTGGAGATACGAACTATTCTTGGGGGACCCACCGGGGGAGAATCGAGCAGGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCCGGTGAGCAAGGTATGTACTCGCTCTTACTTGGTAGAAACTCACCAAACTTGGAGTTTTCAGAGAAAGAGGCAGCAGGCATACATCACCCACACAATGATGCGCTGGTGGTGACCCTAACAGTGGCCAACGTCAAGGTACATCGAATATTGATTGATGGGGGGAGTTCAGCTGATGTTCTCTCAGCCACCGCGTTCGATGCCATGAAGCTGGAAAGCGACCGCCTAAAGCCGAGTCTCACACCGCTGGTAGGCTTTGGCGGAGAAAGAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTCACTAGAATGATAAGCTTCCTAGTAGTGGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGTCTCAACCTACCATCAAGTCCTGAAGTTCCCAACCGAAGAAGGCGTAGGAGAGGTACGAGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATAGACAAGAAGGCCAAGGCAGCGCCCACCTCGGGAAATGGCCGAGGCCGAACATCCGAGGGGTTGGACCACCCAATAGAGCACTAA

mRNA sequence

ATGGAGCTGCCCTTCACTGACGAGATAATGGGAGGGGAGGTAGAAGGTTATGACGACGGAGTCGCCTTGACTGCAGTGATCTCGGGTTTGCAAGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAACCACGAACGTATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTCAAGTCCAAGCAGGAAGAAAGAGAGAGTCGAGGAGTTTCTTTATCCAACCGGCATCGAGAGGATCTGGCAAAGGGGCTCCAAGTCGATGATAGAAGCCGAGAGCCGAAAGCCAAGTTCGACAGGTATACCCCACTAACGACTTCACTTGAACAGGTTTTGGCCGCGATACAGGATACGCACCTACTAAAACGTCTGAAAAGGCTGAGGTCGGACCCAGACAGGAGAAACCAAAACAAGTATTGCATGTTCCATGGAGACCACGGTCACACAACTCGAGAGTGCATACAGCTAAGGGATGAGATAGAAACCCTAATTCGAGAGGGTTACCTCAAGGAGTTCGTGGGACATGATAGGGGGAAGAGGCTAGCGCAGACAGAGCCAGGCAAGGGGGGCAACAACCCACCGCTGGAGATACGAACTATTCTTGGGGGACCCACCGGGGGAGAATCGAGCAGGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCCGGTGAGCAAGGCTTTGGCGGAGAAAGAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTCACTAGAATGATAAGCTTCCTAGTAGTGGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGTCTCAACCTACCATCAAGTCCTGAAGTTCCCAACCGAAGAAGGCGTAGGAGAGGTACGAGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATAGACAAGAAGGCCAAGGCAGCGCCCACCTCGGGAAATGGCCGAGGCCGAACATCCGAGGGGTTGGACCACCCAATAGAGCACTAA

Coding sequence (CDS)

ATGGAGCTGCCCTTCACTGACGAGATAATGGGAGGGGAGGTAGAAGGTTATGACGACGGAGTCGCCTTGACTGCAGTGATCTCGGGTTTGCAAGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAACCACGAACGTATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTCAAGTCCAAGCAGGAAGAAAGAGAGAGTCGAGGAGTTTCTTTATCCAACCGGCATCGAGAGGATCTGGCAAAGGGGCTCCAAGTCGATGATAGAAGCCGAGAGCCGAAAGCCAAGTTCGACAGGTATACCCCACTAACGACTTCACTTGAACAGGTTTTGGCCGCGATACAGGATACGCACCTACTAAAACGTCTGAAAAGGCTGAGGTCGGACCCAGACAGGAGAAACCAAAACAAGTATTGCATGTTCCATGGAGACCACGGTCACACAACTCGAGAGTGCATACAGCTAAGGGATGAGATAGAAACCCTAATTCGAGAGGGTTACCTCAAGGAGTTCGTGGGACATGATAGGGGGAAGAGGCTAGCGCAGACAGAGCCAGGCAAGGGGGGCAACAACCCACCGCTGGAGATACGAACTATTCTTGGGGGACCCACCGGGGGAGAATCGAGCAGGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCCGGTGAGCAAGGCTTTGGCGGAGAAAGAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTCACTAGAATGATAAGCTTCCTAGTAGTGGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGTCTCAACCTACCATCAAGTCCTGAAGTTCCCAACCGAAGAAGGCGTAGGAGAGGTACGAGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATAGACAAGAAGGCCAAGGCAGCGCCCACCTCGGGAAATGGCCGAGGCCGAACATCCGAGGGGTTGGACCACCCAATAGAGCACTAA

Protein sequence

MELPFTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRGVSLSNRHREDLAKGLQVDDRSREPKAKFDRYTPLTTSLEQVLAAIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKRLAQTEPGKGGNNPPLEIRTILGGPTGGESSRKRKAAIREAHMEPGEQGFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTYHQVLKFPTEEGVGEVRGEQRTSRECYFMALKNIDKKAKAAPTSGNGRGRTSEGLDHPIEH
Homology
BLAST of Spg030941 vs. NCBI nr
Match: XP_030963320.1 (uncharacterized protein LOC115984434 [Quercus lobata])

HSP 1 Score: 228.8 bits (582), Expect = 7.3e-56
Identity = 130/336 (38.69%), Postives = 191/336 (56.85%), Query Frame = 0

Query: 14  VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
           V+  DD + L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+ +R  
Sbjct: 254 VDEMDDKLLLAAFHNGVHSDLFIHKLYEQEPQTMAELVHSAQNFMNAEDAIIAKKRKRIE 313

Query: 74  RGVSLSNRHRED---LAKGLQVD----DRSREPKAKFDRYTPLTTSLEQVLAAIQDTHLL 133
           +  +   RH E    L KG   D    DR   P A+  +YTPL    +QVL  I+D   L
Sbjct: 314 KMDANPTRHSEQGPRLKKGRTEDKKDRDRKAGPSARSQQYTPLNMPFDQVLMQIKDDPSL 373

Query: 134 KRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKRL 193
           K L++++ DP++ N+NKYC FH DHGH T EC  L+ +IE LIR+G L+ F+G D     
Sbjct: 374 KWLEKMKGDPNKCNRNKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLRSFLGRDHKDEK 433

Query: 194 AQTEPGKGGNNPPLEIRTILGGPTGGESSRK-----------------RKAAIREAHMEP 253
            + +  +    P  EIR I+GG +  +SSR+                 ++  +    + P
Sbjct: 434 LKGKAEESSRPPLGEIRVIVGGSSTVQSSRRVLVDNGSSADILYFPAFQQMKLGRDRLRP 493

Query: 254 GEQ---GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLK 313
                 GFGG +V P G++ LPV  G  PQ VT+ +SFLVVDC  +YNAI+GRPTL+  K
Sbjct: 494 VNSPLVGFGGMKVQPVGTVTLPVVVGAYPQQVTKDVSFLVVDCSSSYNAIIGRPTLNSWK 553

Query: 314 AVVSTYHQVLKFPTEEGVGEVRGEQRTSRECYFMAL 323
            V STYH  +KFPTE GVG+V+G+Q  +RECY   L
Sbjct: 554 VVTSTYHLSVKFPTEYGVGQVQGDQLAARECYLAML 589

BLAST of Spg030941 vs. NCBI nr
Match: XP_030958631.1 (uncharacterized protein LOC115980538 [Quercus lobata])

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-50
Identity = 132/404 (32.67%), Postives = 198/404 (49.01%), Query Frame = 0

Query: 14  VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
           V+  DD + L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+ +R  
Sbjct: 218 VDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAE 277

Query: 74  RGVSLSNRHREDL---AKGLQVDDRSRE-----PKAKFDRYTPLTTSLEQVLAAIQDTHL 133
           R  +   RH E      KG   D + R+     P  +   YTPL   L QVL  I+D   
Sbjct: 278 RMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLMQIKDDPS 337

Query: 134 LKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKR 193
           LK  ++++ DP++RN+NKYC FH DHGH T EC  L+ +IE LIR+G LK FVG DR   
Sbjct: 338 LKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDE 397

Query: 194 LAQTEPGKGGNNPPLEIRTILGGPTGGESSRKRKAAI----------REAHMEPGEQ--- 253
             + +  +    P  EIR I+GG   G+SS+ +K  +          R     P ++   
Sbjct: 398 KQKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRTPRTRPMDEPTI 457

Query: 254 ------------------------------------------------------------ 313
                                                                       
Sbjct: 458 SFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADVLYYPAFQQMRLGRDQLRA 517

Query: 314 ------GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLK 331
                 GFGG +V P G+I LPV  G  PQ +T+ ++FLVVDC  +YNAI+GRPTL+  K
Sbjct: 518 VCSPLIGFGGMKVQPVGTITLPVVVGSYPQQITKEVNFLVVDCTSSYNAIIGRPTLNSWK 577

BLAST of Spg030941 vs. NCBI nr
Match: XP_030958629.1 (uncharacterized protein LOC115980536 [Quercus lobata])

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-50
Identity = 132/404 (32.67%), Postives = 198/404 (49.01%), Query Frame = 0

Query: 14  VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
           V+  DD + L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+ +R  
Sbjct: 261 VDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAE 320

Query: 74  RGVSLSNRHREDL---AKGLQVDDRSRE-----PKAKFDRYTPLTTSLEQVLAAIQDTHL 133
           R  +   RH E      KG   D + R+     P  +   YTPL   L QVL  I+D   
Sbjct: 321 RMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLMQIKDDPS 380

Query: 134 LKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKR 193
           LK  ++++ DP++RN+NKYC FH DHGH T EC  L+ +IE LIR+G LK FVG DR   
Sbjct: 381 LKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDE 440

Query: 194 LAQTEPGKGGNNPPLEIRTILGGPTGGESSRKRKAAI----------REAHMEPGEQ--- 253
             + +  +    P  EIR I+GG   G+SS+ +K  +          R     P ++   
Sbjct: 441 KQKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRTPRTRPMDEPTI 500

Query: 254 ------------------------------------------------------------ 313
                                                                       
Sbjct: 501 SFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADVLYYPAFQQMRLGRDQLRA 560

Query: 314 ------GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLK 331
                 GFGG +V P G+I LPV  G  PQ +T+ ++FLVVDC  +YNAI+GRPTL+  K
Sbjct: 561 VCSPLIGFGGMKVQPVGTITLPVVVGSYPQQITKEVNFLVVDCTSSYNAIIGRPTLNSWK 620

BLAST of Spg030941 vs. NCBI nr
Match: XP_023916366.1 (uncharacterized protein LOC112027956 [Quercus suber])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-50
Identity = 134/395 (33.92%), Postives = 193/395 (48.86%), Query Frame = 0

Query: 14  VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
           V+  DD + L A  +G+  +  ++ + E  P+T  E +  AQ +++AE+ + +K+ +R  
Sbjct: 262 VDEVDDKLLLAAFHNGVHSDLFIHKLYEQAPQTMAELVHSAQNFMNAEDAIIAKKRKRLE 321

Query: 74  RGVSLSNRHRED---LAKGLQVDDRSRE----PKAKFDRYTPLTTSLEQVLAAIQDTHLL 133
           R  +   R  E      KG   D + R+    P A+  +YTPL   LEQVL  I+D   L
Sbjct: 322 RVEANPMRQSEQGPRPKKGRTKDRKDRDKKAGPSARNQQYTPLNMPLEQVLMQIKDEPSL 381

Query: 134 KRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKRL 193
           K  +++R DP++RN++KYC FH DHGH T EC  L+ +IE LIR+G LK F+G D     
Sbjct: 382 KWPEKMRGDPNKRNRSKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLKNFLGRDHKDEK 441

Query: 194 AQTEPGKGGNNPPLEIRTILGGPTGGESSRKRKAAIREA--------------------- 253
            + +  +    P  EIR I+GG + G+SS  +KA ++E                      
Sbjct: 442 LKGKIEESSRPPLGEIRVIIGGSSAGQSSETKKAYLKEVQSVQLFGRSPRARSTDEQTIT 501

Query: 254 ------------------------------------------------HMEPGEQ----- 313
                                                            M  G       
Sbjct: 502 FTDKEAERIHHPHDDAIVIALLIADYTTRRVLVDNGSSADILYYPAFQQMRVGRNQLRPV 561

Query: 314 -----GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKA 323
                GFGG +V P G++ LPV  G  P+ +T  ++FLVVDC  +YNAI+GRPTL+  KA
Sbjct: 562 HSPLVGFGGMKVQPVGTVTLPVVVGAYPRQLTTDVNFLVVDCSSSYNAIIGRPTLNRWKA 621

BLAST of Spg030941 vs. NCBI nr
Match: XP_023876176.1 (uncharacterized protein LOC111988620 [Quercus suber])

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-50
Identity = 139/402 (34.58%), Postives = 202/402 (50.25%), Query Frame = 0

Query: 14  VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
           ++  DD + + A  +GL+  + L S+ ++ P+T  E + RA +Y++AE+ L+++ ++   
Sbjct: 257 IDEADDKILVAAFTNGLRKGKFLFSLYKNDPKTMAEVLYRATKYMNAEDALQARDDKPRK 316

Query: 74  RGVSLSNRHREDLAKGLQVDD-----RSREPKAKFDRYTPLTTSLEQVLAAIQDTHLLKR 133
           R      R R+  +K  +VDD     RS+ P  +F  +TPLT  ++QVL  I+D   L  
Sbjct: 317 R-ERQEERQRDQGSKRPRVDDRRNERRSKPPGGRFTSFTPLTAPIDQVLMQIKDEGALTF 376

Query: 134 LKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKRLAQ 193
             +L+SDP +R+++KYC FH DHGH T EC  L+ +IE LIR+G L++FV  +R  +  Q
Sbjct: 377 PGKLKSDPSKRSRDKYCRFHRDHGHDTAECYDLKQQIEALIRQGKLQKFVRKERMDQPPQ 436

Query: 194 TEPGKGGN---NPPL-EIRTILGG-PTGGESSRKRKAAIREAH----------------- 253
               +  N    PP+ +IR I+GG  T G S + RK  +R                    
Sbjct: 437 EHQPRRDNERPRPPIGDIRMIVGGTSTTGSSKKARKTYLRMIQNVQLAGSVPKIARRDSP 496

Query: 254 -----------------------MEPGEQ------------------------------- 313
                                  ++ GE                                
Sbjct: 497 IVGFSEEDARRLHHPHDDALVVTLQVGEYNLHRVLVDNGSSADILYYPAFQQMMIDKERL 556

Query: 314 --------GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHG 327
                   GFGG RV P G+I L VT G+ PQ +TR ++FLVV+C  AYNAILGRPTL+ 
Sbjct: 557 TPMSAPLVGFGGTRVFPLGAITLTVTVGDYPQQITRDVTFLVVNCSSAYNAILGRPTLNS 616

BLAST of Spg030941 vs. ExPASy TrEMBL
Match: A0A2N9F5L1 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10315 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 7.4e-54
Identity = 134/367 (36.51%), Postives = 203/367 (55.31%), Query Frame = 0

Query: 5   FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
           F +E M  +++   + V +TA ++GL+    L  + +  P T  E M  A ++++AE+ L
Sbjct: 259 FNEEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 318

Query: 65  KSKQEERESRGVSLSNRH----REDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
           ++  +    R     +R     ++ + K  +  +R R   P  KF  +TPL T ++++L 
Sbjct: 319 EAMDDPPPKRRKETEDRKPEPAKQKVPKFTETPERKRTTAPPVKFSSFTPLNTPIDKLLL 378

Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
            IQD   L+   ++RSDP+ R +N YC FH DHGH T++C+ L +++ETLIR+G L+++V
Sbjct: 379 QIQDDPSLRWPGKIRSDPNNRPKNLYCRFHRDHGHLTKDCVALTEQVETLIRQGKLQKYV 438

Query: 185 GHDRGKRLA-------QTEPGKGGNNPPLEIRTILGGP-TGGESSRKRKAAIREAH---- 244
                 R A       Q EP +    P  EIRTI+GGP +GG S   R+A  R+AH    
Sbjct: 439 SRPANARPAKPPAEREQAEPNR--PEPVGEIRTIIGGPASGGTSRASRRAYARQAHNIMV 498

Query: 245 -----------------MEPGEQG--------------FGGERVSPRGSIELPVTFGEGP 304
                             E   +G                G++V P G + LP+T G  P
Sbjct: 499 VQRPPKNVRLDDQIISFSEEDARGTHQPHDDALVITVNIAGDKVCPVGIVTLPITVGTHP 558

Query: 305 QTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTYHQVLKFPTEEGVGEVRGEQRTSR 323
           +TV++ + FLVV+C  AYNAI+GRPTL+ L+AV STYH +LKFPTE G+GEVRG+Q  +R
Sbjct: 559 KTVSKTVDFLVVNCPSAYNAIIGRPTLNRLQAVTSTYHLLLKFPTEHGIGEVRGDQVAAR 618

BLAST of Spg030941 vs. ExPASy TrEMBL
Match: A0A2N9GNB7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28616 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.7e-53
Identity = 135/384 (35.16%), Postives = 202/384 (52.60%), Query Frame = 0

Query: 5   FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
           F +E M  +++   + V +TA ++GL+    L  + +  P T  E M  A ++++AE+ L
Sbjct: 315 FNEEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 374

Query: 65  KSKQEERESRGVSLSNRH----REDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
           ++  +    R     +R     ++ + K  +  +R R   P  KF  +TPL T ++++L 
Sbjct: 375 EAMDDPPPKRRKEAEDRKPEPAKQKVPKFSETPERKRTTAPPVKFSSFTPLNTPIDKLLL 434

Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
            IQD   L+   ++RSDP+ R +N YC FH DHGH T +C+ L++++ETLIR+G L+++V
Sbjct: 435 QIQDDPSLRWPGKIRSDPNNRPKNLYCRFHRDHGHLTEDCVALKEQVETLIRQGKLQKYV 494

Query: 185 GHDRGKR-------LAQTEPGKGGNNPPLEIRTILGGP-TGGESSRKRKAAIREAH---- 244
                 R         Q EP + G  P  EIRTI+GGP +GG S   RKA  R+ H    
Sbjct: 495 SRPANARPTKPPAQREQAEPNRPG--PVGEIRTIIGGPASGGTSRASRKAYARQVHNVMV 554

Query: 245 ------------------------------------------------MEPGEQGFGGER 304
                                                           M+    GF G++
Sbjct: 555 VQRPPKNIRLDDQGFTTRRVMIDNGSSADILYLPAYQQMRIDKDKLRPMDAPLVGFTGDK 614

Query: 305 VSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTYHQVLKF 323
           V P G + LP+T G  P+TV++ + FLVV+C  AYNAI+GRPTL+ L+AV STYH +LKF
Sbjct: 615 VCPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTYHLLLKF 674

BLAST of Spg030941 vs. ExPASy TrEMBL
Match: A0A2N9H7V3 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35602 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-52
Identity = 136/383 (35.51%), Postives = 204/383 (53.26%), Query Frame = 0

Query: 5   FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
           F +E M  +++   + V +TA ++GL+    L  + +  P T  E M  A ++++AE+ L
Sbjct: 286 FNEEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 345

Query: 65  KSKQEERESRGVSLSNRH----REDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
           ++ ++    R     +R     ++ + K  +  +R R   P  KF  +TPL T ++++L 
Sbjct: 346 EAMEDPPPKRRKEAEDRKPEPAKQKVPKFTETPERKRTTAPPVKFSSFTPLNTPIDKLLL 405

Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
            IQD   L+   ++RSDP+ R +N YC FH DHGH T EC+ L+++IETLIR+G L+++V
Sbjct: 406 QIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQIETLIRQGKLQKYV 465

Query: 185 GHDRGKR----LAQTEPGKGGNNPPL-EIRTILGGP-TGGESSRKRKAAIREAH------ 244
                 R     AQ E  +     P+ EIRTI+GGP +GG S   RKA  R+ H      
Sbjct: 466 SRPTNTRPSKPPAQREQAEHNRPGPVGEIRTIVGGPASGGTSRASRKAYARQVHNIMVVQ 525

Query: 245 -----------------------MEPGEQ------------------------GFGGERV 304
                                   +P +                         GF G++V
Sbjct: 526 RPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINIAGQIAPWMPLVDAPLVGFTGDKV 585

Query: 305 SPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTYHQVLKFP 323
            P G + LP+T G  P+TV++ + FLVV+C  AYNAI+GRPTL+ L+AV STYH +LKFP
Sbjct: 586 CPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTYHLLLKFP 645

BLAST of Spg030941 vs. ExPASy TrEMBL
Match: A0A2N9FYD5 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.0e-52
Identity = 139/425 (32.71%), Postives = 209/425 (49.18%), Query Frame = 0

Query: 5   FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
           F  E M  +++   + V +TA ++GL+    L  + +  P T  E M  A ++++AE+ L
Sbjct: 315 FNGEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 374

Query: 65  KSKQEERESRGVSLSNR----HREDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
           ++  +    R   + +R     ++ + K  +  +R R   P  KF  +TPL T ++++L 
Sbjct: 375 EAMDDPPPKRRKEVEDRKPEPSKQKVPKFTETPERKRTTAPPVKFSSFTPLNTPIDKLLL 434

Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
            IQD   L+   ++RSDP+ R +N YC FH DHGH T EC+ L++++ETLIR+G L+++V
Sbjct: 435 QIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQVETLIRQGKLQKYV 494

Query: 185 GHDRGKRLA-------QTEPGKGGNNPPLEIRTILGGP-TGGESSRKRKAAIREAH---- 244
                 R A       Q EP + G  P  EIRTI+GGP +GG S   RKA  R+ H    
Sbjct: 495 NRPTNTRPAKPPVQREQAEPNRPG--PVGEIRTIVGGPASGGTSRASRKAYARQVHNIMV 554

Query: 245 ------------------------------------------------------------ 304
                                                                       
Sbjct: 555 VQRPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINIAGFTTRRVMVDNGSSADILYL 614

Query: 305 ---------------MEPGEQGFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVP 337
                          M+    GF G+++ P G + LP+  G  P+TV++ + FLVV+C  
Sbjct: 615 PAYQQMQLDKDKLRPMDAPLVGFTGDKICPVGIVTLPIMVGTHPKTVSKTVDFLVVNCPS 674

BLAST of Spg030941 vs. ExPASy TrEMBL
Match: A0A2N9H0S8 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33092 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.6e-51
Identity = 134/390 (34.36%), Postives = 201/390 (51.54%), Query Frame = 0

Query: 5   FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
           F +E M  +++   + V +TA ++GL+    L  + +  P T  E M  A ++++AE+ L
Sbjct: 311 FNEEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 370

Query: 65  KSKQEERESRGVSLSNRH----REDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
           ++  +    R     +R     ++ + K  +  +R R   P  KF   TPL T ++++L 
Sbjct: 371 EAMDDPPPKRRKETEDRKPKPAKQKVPKFTETPERKRTTAPPVKFSSLTPLNTPIDKLLL 430

Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
            IQD   L+ L ++RSDP+ R +N YC FH DHGH T +C+ L++++ETLIR+G L+++V
Sbjct: 431 QIQDDPSLRWLGKIRSDPNNRPKNLYCRFHRDHGHLTEDCVALKEQVETLIRQGKLQKYV 490

Query: 185 GHDRGKRLA-------QTEPGKGGNNPPLEIRTILGGP-TGGESSRKRKAAIREAH---- 244
                   A       Q +P + G  P  EIRTI+GGP +GG S   RKA  R+ H    
Sbjct: 491 SRPANASPAKPSAQRGQAKPNRPG--PVGEIRTIIGGPASGGTSRASRKAYARQVHNIMV 550

Query: 245 ------------------------------------------------------MEPGEQ 304
                                                                 M+    
Sbjct: 551 VQRPLKNVRLDDQIISFSEEDARGTHQPHDDALVITVNIAAYQQMRLDKDKLCPMDAPLV 610

Query: 305 GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTY 323
           GF G++V P G + LP+T G   +TV++ + FLVV+C  AYNAI+GRPTL+ L+AV STY
Sbjct: 611 GFTGDKVCPVGIVTLPITVGTHSKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTY 670

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030963320.17.3e-5638.69uncharacterized protein LOC115984434 [Quercus lobata][more]
XP_030958631.11.2e-5032.67uncharacterized protein LOC115980538 [Quercus lobata][more]
XP_030958629.11.2e-5032.67uncharacterized protein LOC115980536 [Quercus lobata][more]
XP_023916366.11.6e-5033.92uncharacterized protein LOC112027956 [Quercus suber][more]
XP_023876176.12.7e-5034.58uncharacterized protein LOC111988620 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9F5L17.4e-5436.51RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10315 ... [more]
A0A2N9GNB73.7e-5335.16Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28616 PE=4 SV=1[more]
A0A2N9H7V31.4e-5235.51Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35602 PE=3 SV=1[more]
A0A2N9FYD59.0e-5232.71Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1[more]
A0A2N9H0S82.6e-5134.36Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33092 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..218
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 95..199
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 239..308
NoneNo IPR availablePANTHERPTHR33240OS08G0508500 PROTEINcoord: 239..308
coord: 95..199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030941.1Spg030941.1mRNA