Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTGCCCTTCACTGACGAGATAATGGGAGGGGAGGTGCCACATAAATTTAAGGTGTCAAACTTCCCACAGTATGATGGAAAGAAGGACCCGAAGCAGCATCTAGACGCATATTTAACGTGGATGGACTTCCATGGGGCGAATGAAGCAACAAGATGTCGGGCGTTCGCACTAACGCTTACTGGTTTGGCGAGACAATGGTTCAGCAAAATATCGCGGAAATCAATCGGCTCGTTCAAAGAATTGGCCCGAGCATTCGTTACGCAATTTTTAGGCGCCCGGAGCATGCAGAAGCCCTAGATCAACCTACTGACAGTAAAACAGGGGTTGCGGGAAAGCTTGAAGGATTACATTAACCGATTCAGCAACGAGGTTTTGCAGGTAGAAGGTTATGACGACGGAGTCGCCTTGACTGCAGTGATCTCGGGTTTGCAAGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAACCACGAACGTATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTCAAGTCCAAGCAGGAAGAAAGAGAGAGTCGAGGAGTTTCTTTATCCAACCGGCATCGAGAGGATCTGGCAAAGGGGCTCCAAGTCGATGATAGAAGCCGAGGTCGACATTAGTAGTCCTCGGCCAATGGTCGAGGCCGAGCAGAAGCCAAGGATCTGCGGGGCCGTGTAGAGCCGAAAGCCAAGTTCGACAGGTATACCCCACTAACGACTTCACTTGAACAGGTTTTGGCCGCGATACAGGATACGCACCTACTAAAACGTCTGAAAAGGCTGAGGTCGGACCCAGACAGGAGAAACCAAAACAAGTATTGCATGTTCCATGGAGACCACGGTCACACAACTCGAGAGTGCATACAGCTAAGGGATGAGATAGAAACCCTAATTCGAGAGGGTTACCTCAAGGAGTTCGTGGGACATGATAGGGGGAAGAGGCTAGCGCAGACAGAGCCAGGCAAGGGGGGCAACAACCCACCGCTGGAGATACGAACTATTCTTGGGGGACCCACCGGGGGAGAATCGAGCAGGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCCGGTGAGCAAGGTATGTACTCGCTCTTACTTGGTAGAAACTCACCAAACTTGGAGTTTTCAGAGAAAGAGGCAGCAGGCATACATCACCCACACAATGATGCGCTGGTGGTGACCCTAACAGTGGCCAACGTCAAGGTACATCGAATATTGATTGATGGGGGGAGTTCAGCTGATGTTCTCTCAGCCACCGCGTTCGATGCCATGAAGCTGGAAAGCGACCGCCTAAAGCCGAGTCTCACACCGCTGGTAGGCTTTGGCGGAGAAAGAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTCACTAGAATGATAAGCTTCCTAGTAGTGGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGTCTCAACCTACCATCAAGTCCTGAAGTTCCCAACCGAAGAAGGCGTAGGAGAGGTACGAGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATAGACAAGAAGGCCAAGGCAGCGCCCACCTCGGGAAATGGCCGAGGCCGAACATCCGAGGGGTTGGACCACCCAATAGAGCACTAA
mRNA sequence
ATGGAGCTGCCCTTCACTGACGAGATAATGGGAGGGGAGGTAGAAGGTTATGACGACGGAGTCGCCTTGACTGCAGTGATCTCGGGTTTGCAAGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAACCACGAACGTATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTCAAGTCCAAGCAGGAAGAAAGAGAGAGTCGAGGAGTTTCTTTATCCAACCGGCATCGAGAGGATCTGGCAAAGGGGCTCCAAGTCGATGATAGAAGCCGAGAGCCGAAAGCCAAGTTCGACAGGTATACCCCACTAACGACTTCACTTGAACAGGTTTTGGCCGCGATACAGGATACGCACCTACTAAAACGTCTGAAAAGGCTGAGGTCGGACCCAGACAGGAGAAACCAAAACAAGTATTGCATGTTCCATGGAGACCACGGTCACACAACTCGAGAGTGCATACAGCTAAGGGATGAGATAGAAACCCTAATTCGAGAGGGTTACCTCAAGGAGTTCGTGGGACATGATAGGGGGAAGAGGCTAGCGCAGACAGAGCCAGGCAAGGGGGGCAACAACCCACCGCTGGAGATACGAACTATTCTTGGGGGACCCACCGGGGGAGAATCGAGCAGGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCCGGTGAGCAAGGCTTTGGCGGAGAAAGAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTCACTAGAATGATAAGCTTCCTAGTAGTGGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGTCTCAACCTACCATCAAGTCCTGAAGTTCCCAACCGAAGAAGGCGTAGGAGAGGTACGAGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATAGACAAGAAGGCCAAGGCAGCGCCCACCTCGGGAAATGGCCGAGGCCGAACATCCGAGGGGTTGGACCACCCAATAGAGCACTAA
Coding sequence (CDS)
ATGGAGCTGCCCTTCACTGACGAGATAATGGGAGGGGAGGTAGAAGGTTATGACGACGGAGTCGCCTTGACTGCAGTGATCTCGGGTTTGCAAGATGAAAGGTTGCTCAACTCGATTGGCGAAAGCCAACCACGAACGTATGTGGAGTTCATGACCCGAGCACAGAGGTACATCAGTGCCGAGGAGTTGCTCAAGTCCAAGCAGGAAGAAAGAGAGAGTCGAGGAGTTTCTTTATCCAACCGGCATCGAGAGGATCTGGCAAAGGGGCTCCAAGTCGATGATAGAAGCCGAGAGCCGAAAGCCAAGTTCGACAGGTATACCCCACTAACGACTTCACTTGAACAGGTTTTGGCCGCGATACAGGATACGCACCTACTAAAACGTCTGAAAAGGCTGAGGTCGGACCCAGACAGGAGAAACCAAAACAAGTATTGCATGTTCCATGGAGACCACGGTCACACAACTCGAGAGTGCATACAGCTAAGGGATGAGATAGAAACCCTAATTCGAGAGGGTTACCTCAAGGAGTTCGTGGGACATGATAGGGGGAAGAGGCTAGCGCAGACAGAGCCAGGCAAGGGGGGCAACAACCCACCGCTGGAGATACGAACTATTCTTGGGGGACCCACCGGGGGAGAATCGAGCAGGAAGCGAAAAGCCGCAATTCGAGAGGCACATATGGAGCCCGGTGAGCAAGGCTTTGGCGGAGAAAGAGTAAGCCCAAGGGGAAGCATCGAGCTGCCGGTGACGTTTGGTGAAGGGCCGCAGACAGTCACTAGAATGATAAGCTTCCTAGTAGTGGACTGTGTCCCAGCATACAACGCAATCCTGGGACGGCCAACCCTACATGGGCTCAAAGCAGTAGTCTCAACCTACCATCAAGTCCTGAAGTTCCCAACCGAAGAAGGCGTAGGAGAGGTACGAGGGGAGCAGAGGACATCAAGAGAGTGCTATTTCATGGCGCTCAAGAATATAGACAAGAAGGCCAAGGCAGCGCCCACCTCGGGAAATGGCCGAGGCCGAACATCCGAGGGGTTGGACCACCCAATAGAGCACTAA
Protein sequence
MELPFTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRGVSLSNRHREDLAKGLQVDDRSREPKAKFDRYTPLTTSLEQVLAAIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKRLAQTEPGKGGNNPPLEIRTILGGPTGGESSRKRKAAIREAHMEPGEQGFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTYHQVLKFPTEEGVGEVRGEQRTSRECYFMALKNIDKKAKAAPTSGNGRGRTSEGLDHPIEH
Homology
BLAST of Spg030941 vs. NCBI nr
Match:
XP_030963320.1 (uncharacterized protein LOC115984434 [Quercus lobata])
HSP 1 Score: 228.8 bits (582), Expect = 7.3e-56
Identity = 130/336 (38.69%), Postives = 191/336 (56.85%), Query Frame = 0
Query: 14 VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
V+ DD + L A +G+ + ++ + E +P+T E + AQ +++AE+ + +K+ +R
Sbjct: 254 VDEMDDKLLLAAFHNGVHSDLFIHKLYEQEPQTMAELVHSAQNFMNAEDAIIAKKRKRIE 313
Query: 74 RGVSLSNRHRED---LAKGLQVD----DRSREPKAKFDRYTPLTTSLEQVLAAIQDTHLL 133
+ + RH E L KG D DR P A+ +YTPL +QVL I+D L
Sbjct: 314 KMDANPTRHSEQGPRLKKGRTEDKKDRDRKAGPSARSQQYTPLNMPFDQVLMQIKDDPSL 373
Query: 134 KRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKRL 193
K L++++ DP++ N+NKYC FH DHGH T EC L+ +IE LIR+G L+ F+G D
Sbjct: 374 KWLEKMKGDPNKCNRNKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLRSFLGRDHKDEK 433
Query: 194 AQTEPGKGGNNPPLEIRTILGGPTGGESSRK-----------------RKAAIREAHMEP 253
+ + + P EIR I+GG + +SSR+ ++ + + P
Sbjct: 434 LKGKAEESSRPPLGEIRVIVGGSSTVQSSRRVLVDNGSSADILYFPAFQQMKLGRDRLRP 493
Query: 254 GEQ---GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLK 313
GFGG +V P G++ LPV G PQ VT+ +SFLVVDC +YNAI+GRPTL+ K
Sbjct: 494 VNSPLVGFGGMKVQPVGTVTLPVVVGAYPQQVTKDVSFLVVDCSSSYNAIIGRPTLNSWK 553
Query: 314 AVVSTYHQVLKFPTEEGVGEVRGEQRTSRECYFMAL 323
V STYH +KFPTE GVG+V+G+Q +RECY L
Sbjct: 554 VVTSTYHLSVKFPTEYGVGQVQGDQLAARECYLAML 589
BLAST of Spg030941 vs. NCBI nr
Match:
XP_030958631.1 (uncharacterized protein LOC115980538 [Quercus lobata])
HSP 1 Score: 211.5 bits (537), Expect = 1.2e-50
Identity = 132/404 (32.67%), Postives = 198/404 (49.01%), Query Frame = 0
Query: 14 VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
V+ DD + L A +G+ + ++ + E +P+T E + AQ +++AE+ + +K+ +R
Sbjct: 218 VDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAE 277
Query: 74 RGVSLSNRHREDL---AKGLQVDDRSRE-----PKAKFDRYTPLTTSLEQVLAAIQDTHL 133
R + RH E KG D + R+ P + YTPL L QVL I+D
Sbjct: 278 RMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLMQIKDDPS 337
Query: 134 LKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKR 193
LK ++++ DP++RN+NKYC FH DHGH T EC L+ +IE LIR+G LK FVG DR
Sbjct: 338 LKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDE 397
Query: 194 LAQTEPGKGGNNPPLEIRTILGGPTGGESSRKRKAAI----------REAHMEPGEQ--- 253
+ + + P EIR I+GG G+SS+ +K + R P ++
Sbjct: 398 KQKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRTPRTRPMDEPTI 457
Query: 254 ------------------------------------------------------------ 313
Sbjct: 458 SFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADVLYYPAFQQMRLGRDQLRA 517
Query: 314 ------GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLK 331
GFGG +V P G+I LPV G PQ +T+ ++FLVVDC +YNAI+GRPTL+ K
Sbjct: 518 VCSPLIGFGGMKVQPVGTITLPVVVGSYPQQITKEVNFLVVDCTSSYNAIIGRPTLNSWK 577
BLAST of Spg030941 vs. NCBI nr
Match:
XP_030958629.1 (uncharacterized protein LOC115980536 [Quercus lobata])
HSP 1 Score: 211.5 bits (537), Expect = 1.2e-50
Identity = 132/404 (32.67%), Postives = 198/404 (49.01%), Query Frame = 0
Query: 14 VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
V+ DD + L A +G+ + ++ + E +P+T E + AQ +++AE+ + +K+ +R
Sbjct: 261 VDEVDDKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKKRKRAE 320
Query: 74 RGVSLSNRHREDL---AKGLQVDDRSRE-----PKAKFDRYTPLTTSLEQVLAAIQDTHL 133
R + RH E KG D + R+ P + YTPL L QVL I+D
Sbjct: 321 RMEAHPARHSEQAPRPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPLNQVLMQIKDDPS 380
Query: 134 LKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKR 193
LK ++++ DP++RN+NKYC FH DHGH T EC L+ +IE LIR+G LK FVG DR
Sbjct: 381 LKWPEKMKGDPNKRNKNKYCRFHRDHGHDTDECYDLKQQIENLIRQGKLKHFVGRDRTDE 440
Query: 194 LAQTEPGKGGNNPPLEIRTILGGPTGGESSRKRKAAI----------REAHMEPGEQ--- 253
+ + + P EIR I+GG G+SS+ +K + R P ++
Sbjct: 441 KQKGKMEESSRPPLGEIRIIVGGNPMGQSSKSKKTYLKAVQNVQLSGRTPRTRPMDEPTI 500
Query: 254 ------------------------------------------------------------ 313
Sbjct: 501 SFTNEDAERIHHPHDDAIVITLLIADYTTRRVLVDNGSSADVLYYPAFQQMRLGRDQLRA 560
Query: 314 ------GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLK 331
GFGG +V P G+I LPV G PQ +T+ ++FLVVDC +YNAI+GRPTL+ K
Sbjct: 561 VCSPLIGFGGMKVQPVGTITLPVVVGSYPQQITKEVNFLVVDCTSSYNAIIGRPTLNSWK 620
BLAST of Spg030941 vs. NCBI nr
Match:
XP_023916366.1 (uncharacterized protein LOC112027956 [Quercus suber])
HSP 1 Score: 211.1 bits (536), Expect = 1.6e-50
Identity = 134/395 (33.92%), Postives = 193/395 (48.86%), Query Frame = 0
Query: 14 VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
V+ DD + L A +G+ + ++ + E P+T E + AQ +++AE+ + +K+ +R
Sbjct: 262 VDEVDDKLLLAAFHNGVHSDLFIHKLYEQAPQTMAELVHSAQNFMNAEDAIIAKKRKRLE 321
Query: 74 RGVSLSNRHRED---LAKGLQVDDRSRE----PKAKFDRYTPLTTSLEQVLAAIQDTHLL 133
R + R E KG D + R+ P A+ +YTPL LEQVL I+D L
Sbjct: 322 RVEANPMRQSEQGPRPKKGRTKDRKDRDKKAGPSARNQQYTPLNMPLEQVLMQIKDEPSL 381
Query: 134 KRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKRL 193
K +++R DP++RN++KYC FH DHGH T EC L+ +IE LIR+G LK F+G D
Sbjct: 382 KWPEKMRGDPNKRNRSKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLKNFLGRDHKDEK 441
Query: 194 AQTEPGKGGNNPPLEIRTILGGPTGGESSRKRKAAIREA--------------------- 253
+ + + P EIR I+GG + G+SS +KA ++E
Sbjct: 442 LKGKIEESSRPPLGEIRVIIGGSSAGQSSETKKAYLKEVQSVQLFGRSPRARSTDEQTIT 501
Query: 254 ------------------------------------------------HMEPGEQ----- 313
M G
Sbjct: 502 FTDKEAERIHHPHDDAIVIALLIADYTTRRVLVDNGSSADILYYPAFQQMRVGRNQLRPV 561
Query: 314 -----GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKA 323
GFGG +V P G++ LPV G P+ +T ++FLVVDC +YNAI+GRPTL+ KA
Sbjct: 562 HSPLVGFGGMKVQPVGTVTLPVVVGAYPRQLTTDVNFLVVDCSSSYNAIIGRPTLNRWKA 621
BLAST of Spg030941 vs. NCBI nr
Match:
XP_023876176.1 (uncharacterized protein LOC111988620 [Quercus suber])
HSP 1 Score: 210.3 bits (534), Expect = 2.7e-50
Identity = 139/402 (34.58%), Postives = 202/402 (50.25%), Query Frame = 0
Query: 14 VEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERES 73
++ DD + + A +GL+ + L S+ ++ P+T E + RA +Y++AE+ L+++ ++
Sbjct: 257 IDEADDKILVAAFTNGLRKGKFLFSLYKNDPKTMAEVLYRATKYMNAEDALQARDDKPRK 316
Query: 74 RGVSLSNRHREDLAKGLQVDD-----RSREPKAKFDRYTPLTTSLEQVLAAIQDTHLLKR 133
R R R+ +K +VDD RS+ P +F +TPLT ++QVL I+D L
Sbjct: 317 R-ERQEERQRDQGSKRPRVDDRRNERRSKPPGGRFTSFTPLTAPIDQVLMQIKDEGALTF 376
Query: 134 LKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVGHDRGKRLAQ 193
+L+SDP +R+++KYC FH DHGH T EC L+ +IE LIR+G L++FV +R + Q
Sbjct: 377 PGKLKSDPSKRSRDKYCRFHRDHGHDTAECYDLKQQIEALIRQGKLQKFVRKERMDQPPQ 436
Query: 194 TEPGKGGN---NPPL-EIRTILGG-PTGGESSRKRKAAIREAH----------------- 253
+ N PP+ +IR I+GG T G S + RK +R
Sbjct: 437 EHQPRRDNERPRPPIGDIRMIVGGTSTTGSSKKARKTYLRMIQNVQLAGSVPKIARRDSP 496
Query: 254 -----------------------MEPGEQ------------------------------- 313
++ GE
Sbjct: 497 IVGFSEEDARRLHHPHDDALVVTLQVGEYNLHRVLVDNGSSADILYYPAFQQMMIDKERL 556
Query: 314 --------GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHG 327
GFGG RV P G+I L VT G+ PQ +TR ++FLVV+C AYNAILGRPTL+
Sbjct: 557 TPMSAPLVGFGGTRVFPLGAITLTVTVGDYPQQITRDVTFLVVNCSSAYNAILGRPTLNS 616
BLAST of Spg030941 vs. ExPASy TrEMBL
Match:
A0A2N9F5L1 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10315 PE=4 SV=1)
HSP 1 Score: 221.1 bits (562), Expect = 7.4e-54
Identity = 134/367 (36.51%), Postives = 203/367 (55.31%), Query Frame = 0
Query: 5 FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
F +E M +++ + V +TA ++GL+ L + + P T E M A ++++AE+ L
Sbjct: 259 FNEEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 318
Query: 65 KSKQEERESRGVSLSNRH----REDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
++ + R +R ++ + K + +R R P KF +TPL T ++++L
Sbjct: 319 EAMDDPPPKRRKETEDRKPEPAKQKVPKFTETPERKRTTAPPVKFSSFTPLNTPIDKLLL 378
Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
IQD L+ ++RSDP+ R +N YC FH DHGH T++C+ L +++ETLIR+G L+++V
Sbjct: 379 QIQDDPSLRWPGKIRSDPNNRPKNLYCRFHRDHGHLTKDCVALTEQVETLIRQGKLQKYV 438
Query: 185 GHDRGKRLA-------QTEPGKGGNNPPLEIRTILGGP-TGGESSRKRKAAIREAH---- 244
R A Q EP + P EIRTI+GGP +GG S R+A R+AH
Sbjct: 439 SRPANARPAKPPAEREQAEPNR--PEPVGEIRTIIGGPASGGTSRASRRAYARQAHNIMV 498
Query: 245 -----------------MEPGEQG--------------FGGERVSPRGSIELPVTFGEGP 304
E +G G++V P G + LP+T G P
Sbjct: 499 VQRPPKNVRLDDQIISFSEEDARGTHQPHDDALVITVNIAGDKVCPVGIVTLPITVGTHP 558
Query: 305 QTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTYHQVLKFPTEEGVGEVRGEQRTSR 323
+TV++ + FLVV+C AYNAI+GRPTL+ L+AV STYH +LKFPTE G+GEVRG+Q +R
Sbjct: 559 KTVSKTVDFLVVNCPSAYNAIIGRPTLNRLQAVTSTYHLLLKFPTEHGIGEVRGDQVAAR 618
BLAST of Spg030941 vs. ExPASy TrEMBL
Match:
A0A2N9GNB7 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28616 PE=4 SV=1)
HSP 1 Score: 218.8 bits (556), Expect = 3.7e-53
Identity = 135/384 (35.16%), Postives = 202/384 (52.60%), Query Frame = 0
Query: 5 FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
F +E M +++ + V +TA ++GL+ L + + P T E M A ++++AE+ L
Sbjct: 315 FNEEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 374
Query: 65 KSKQEERESRGVSLSNRH----REDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
++ + R +R ++ + K + +R R P KF +TPL T ++++L
Sbjct: 375 EAMDDPPPKRRKEAEDRKPEPAKQKVPKFSETPERKRTTAPPVKFSSFTPLNTPIDKLLL 434
Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
IQD L+ ++RSDP+ R +N YC FH DHGH T +C+ L++++ETLIR+G L+++V
Sbjct: 435 QIQDDPSLRWPGKIRSDPNNRPKNLYCRFHRDHGHLTEDCVALKEQVETLIRQGKLQKYV 494
Query: 185 GHDRGKR-------LAQTEPGKGGNNPPLEIRTILGGP-TGGESSRKRKAAIREAH---- 244
R Q EP + G P EIRTI+GGP +GG S RKA R+ H
Sbjct: 495 SRPANARPTKPPAQREQAEPNRPG--PVGEIRTIIGGPASGGTSRASRKAYARQVHNVMV 554
Query: 245 ------------------------------------------------MEPGEQGFGGER 304
M+ GF G++
Sbjct: 555 VQRPPKNIRLDDQGFTTRRVMIDNGSSADILYLPAYQQMRIDKDKLRPMDAPLVGFTGDK 614
Query: 305 VSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTYHQVLKF 323
V P G + LP+T G P+TV++ + FLVV+C AYNAI+GRPTL+ L+AV STYH +LKF
Sbjct: 615 VCPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTYHLLLKF 674
BLAST of Spg030941 vs. ExPASy TrEMBL
Match:
A0A2N9H7V3 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35602 PE=3 SV=1)
HSP 1 Score: 216.9 bits (551), Expect = 1.4e-52
Identity = 136/383 (35.51%), Postives = 204/383 (53.26%), Query Frame = 0
Query: 5 FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
F +E M +++ + V +TA ++GL+ L + + P T E M A ++++AE+ L
Sbjct: 286 FNEEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 345
Query: 65 KSKQEERESRGVSLSNRH----REDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
++ ++ R +R ++ + K + +R R P KF +TPL T ++++L
Sbjct: 346 EAMEDPPPKRRKEAEDRKPEPAKQKVPKFTETPERKRTTAPPVKFSSFTPLNTPIDKLLL 405
Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
IQD L+ ++RSDP+ R +N YC FH DHGH T EC+ L+++IETLIR+G L+++V
Sbjct: 406 QIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQIETLIRQGKLQKYV 465
Query: 185 GHDRGKR----LAQTEPGKGGNNPPL-EIRTILGGP-TGGESSRKRKAAIREAH------ 244
R AQ E + P+ EIRTI+GGP +GG S RKA R+ H
Sbjct: 466 SRPTNTRPSKPPAQREQAEHNRPGPVGEIRTIVGGPASGGTSRASRKAYARQVHNIMVVQ 525
Query: 245 -----------------------MEPGEQ------------------------GFGGERV 304
+P + GF G++V
Sbjct: 526 RPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINIAGQIAPWMPLVDAPLVGFTGDKV 585
Query: 305 SPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTYHQVLKFP 323
P G + LP+T G P+TV++ + FLVV+C AYNAI+GRPTL+ L+AV STYH +LKFP
Sbjct: 586 CPVGIVTLPITVGTHPKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTYHLLLKFP 645
BLAST of Spg030941 vs. ExPASy TrEMBL
Match:
A0A2N9FYD5 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1)
HSP 1 Score: 214.2 bits (544), Expect = 9.0e-52
Identity = 139/425 (32.71%), Postives = 209/425 (49.18%), Query Frame = 0
Query: 5 FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
F E M +++ + V +TA ++GL+ L + + P T E M A ++++AE+ L
Sbjct: 315 FNGEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 374
Query: 65 KSKQEERESRGVSLSNR----HREDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
++ + R + +R ++ + K + +R R P KF +TPL T ++++L
Sbjct: 375 EAMDDPPPKRRKEVEDRKPEPSKQKVPKFTETPERKRTTAPPVKFSSFTPLNTPIDKLLL 434
Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
IQD L+ ++RSDP+ R +N YC FH DHGH T EC+ L++++ETLIR+G L+++V
Sbjct: 435 QIQDDPSLRWPGKIRSDPNSRPKNLYCRFHRDHGHLTEECVALKEQVETLIRQGKLQKYV 494
Query: 185 GHDRGKRLA-------QTEPGKGGNNPPLEIRTILGGP-TGGESSRKRKAAIREAH---- 244
R A Q EP + G P EIRTI+GGP +GG S RKA R+ H
Sbjct: 495 NRPTNTRPAKPPVQREQAEPNRPG--PVGEIRTIVGGPASGGTSRASRKAYARQVHNIMV 554
Query: 245 ------------------------------------------------------------ 304
Sbjct: 555 VQRPPKNIRLDDQIISFSEEDARGTHQPHDDALVITINIAGFTTRRVMVDNGSSADILYL 614
Query: 305 ---------------MEPGEQGFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVP 337
M+ GF G+++ P G + LP+ G P+TV++ + FLVV+C
Sbjct: 615 PAYQQMQLDKDKLRPMDAPLVGFTGDKICPVGIVTLPIMVGTHPKTVSKTVDFLVVNCPS 674
BLAST of Spg030941 vs. ExPASy TrEMBL
Match:
A0A2N9H0S8 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33092 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 2.6e-51
Identity = 134/390 (34.36%), Postives = 201/390 (51.54%), Query Frame = 0
Query: 5 FTDEIMGGEVEGYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELL 64
F +E M +++ + V +TA ++GL+ L + + P T E M A ++++AE+ L
Sbjct: 311 FNEEAM--KIDRPKEDVTVTAFMAGLRKGDFLYELCKDPPETMSELMYEATKHMNAEDAL 370
Query: 65 KSKQEERESRGVSLSNRH----REDLAKGLQVDDRSR--EPKAKFDRYTPLTTSLEQVLA 124
++ + R +R ++ + K + +R R P KF TPL T ++++L
Sbjct: 371 EAMDDPPPKRRKETEDRKPKPAKQKVPKFTETPERKRTTAPPVKFSSLTPLNTPIDKLLL 430
Query: 125 AIQDTHLLKRLKRLRSDPDRRNQNKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFV 184
IQD L+ L ++RSDP+ R +N YC FH DHGH T +C+ L++++ETLIR+G L+++V
Sbjct: 431 QIQDDPSLRWLGKIRSDPNNRPKNLYCRFHRDHGHLTEDCVALKEQVETLIRQGKLQKYV 490
Query: 185 GHDRGKRLA-------QTEPGKGGNNPPLEIRTILGGP-TGGESSRKRKAAIREAH---- 244
A Q +P + G P EIRTI+GGP +GG S RKA R+ H
Sbjct: 491 SRPANASPAKPSAQRGQAKPNRPG--PVGEIRTIIGGPASGGTSRASRKAYARQVHNIMV 550
Query: 245 ------------------------------------------------------MEPGEQ 304
M+
Sbjct: 551 VQRPLKNVRLDDQIISFSEEDARGTHQPHDDALVITVNIAAYQQMRLDKDKLCPMDAPLV 610
Query: 305 GFGGERVSPRGSIELPVTFGEGPQTVTRMISFLVVDCVPAYNAILGRPTLHGLKAVVSTY 323
GF G++V P G + LP+T G +TV++ + FLVV+C AYNAI+GRPTL+ L+AV STY
Sbjct: 611 GFTGDKVCPVGIVTLPITVGTHSKTVSKTVDFLVVNCPSAYNAIIGRPTLNRLRAVTSTY 670
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9F5L1 | 7.4e-54 | 36.51 | RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10315 ... | [more] |
A0A2N9GNB7 | 3.7e-53 | 35.16 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28616 PE=4 SV=1 | [more] |
A0A2N9H7V3 | 1.4e-52 | 35.51 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35602 PE=3 SV=1 | [more] |
A0A2N9FYD5 | 9.0e-52 | 32.71 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1 | [more] |
A0A2N9H0S8 | 2.6e-51 | 34.36 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33092 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |