Spg030938 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030938
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationscaffold11: 24314187 .. 24317082 (+)
RNA-Seq ExpressionSpg030938
SyntenySpg030938
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACCTCCTCAGCCCACTCTTTCAAGATCGAAAGAAAAACCTTCTCCATCACTACTGACCAGAAGAACCCTAGTCTCTTCCGACTCACTGAAGCTAGCAAGGAAAAAAGCTTTACTCTGACACTCACAAATGAGACTCTATCTTGGCTCCAATCTTGTTTTGACAGACTTTGCAACCTTCCCCAGACTCAGAAGGTTTTTAACGAGATCAGAGTAGATGAAGCTTTTGGGTAGAAAAAATATCTAGTAGAAGAGGTCACTCAGCTGAAATAGCCAAGCTTGGACCAAATGGTGGCATTAATAAGCTCATTGTGCCTGTTGGTGAAAATCGAAAAGGATGGTGTAGTCTTACTGCCTGCATTAACTCCCGCAACACCATTTGGGTCAGCAAGGAACCACGGCTGTTTGGTAAAGGGACGGAAAATACCTCATACAAGGATGCATTAAAGACGTCTCAAAGGAAATGTGATCCACCCAACCACCAACAACCTCTGGATGTAGTCCCCACTCCTTCTAACCCACAGTTCGCTGCTTTATACCTGTCATCATCGGTCATTATCCAGAGAAAACACTTCCACGATAGTTGGTATGATATCTTGAGGGCTCTGCAACAACACTTATCAGATTTGTCTTTAGTCAGCCCCATCCAGCCAGACAAAGCCCTCCTGCTTGTAAAGATGAAGAACAAGCTCGGGTTATAGCCAATATTAAGGGGTGGTATAAGGTTGGAAACTTCCAAGTTCGCTTCTTCCCATGGAGTGCCGAAGCAATGCTGAGTGAACCAAAAGTACCCTCTTACGGTGGCTGGATAAAAGTCAGGAACTTACCATTAGGCAAATGGTCGATCGACATCTTCAAGAAAATAGGAGATGAATGTGGGGGCTATTTGGAAACAGCAAACAAAACCCTATCTCGTTTGGATATGATGGAGATAGGAATCAAGGTCAAGGAAAATCTTTTGGGCTTTCTTCCAGCGATAGTTCACCTCCCCTCAACCTCCAACAGTCCCATATCAGTATCCATCGACCCATTCTTCATGGAGGAATACAACATAGGTTATGTCATCGGTATTCATGGCAAGATACCATCATTTTCGATGGCTTCCAGTGCTACACGCGCCGATGAGAGAATATATGTTGCGGATAACGAACGGGTTTATAACCCACGCGCCACCACTCTGAATGATGAAACAAAAGGGGAAAAGAAACAGGCCACATACAGAAGCGACTTTCCACAGGCCCCAAATGATGTATTGGACACATCCACTGCTCTGATGTCTGCGTCTTTATTTGACAGGGACCCACTGGCGCCGTCTATCACCACAGAGCCCCAATCCCCAAATTCCTCTCTTGATAATCACTCGGTTAAAGTACCCAATAAAACCCTACCTTTTGACGGTAACCAGAGAGGCCCACTTGGCCCACCCAATACCAACCCATCTCACCCACCTGGCCCACCAAAAAGCCCTATCCAATGCTTAGCTGCTCATAGAAAGCCCATTGTTATCAACAATAAAAAAACCTATCTCATCATCGGAAACAAACACTCCACGAATACAGAGCTCCCTGTTTCAGACTCTGAAGGATTTTTATCCTCCTCATGTTCTACCGCCATGATTAGATCCTCAACCTCAACACCTGAAAGAGCGACACAGAACCAGACCTCCCCACCCACGATTAGCAGACTTTTCAAACACAATCAAGAACAAGAGCCTTTTATCGAAGATCCTATTCCCTTGCAAATAGAAGAGCCTCAATCCGATCAGCAGGGAATAGGTTTACAAGACACAGATCTCATTGAGGTTTTTGTGGAAGAAGACGTCTCGGTAGAGTTGTATCCCGAGGACACCAAAATTGACCCAGCTGTATATCTTCCCATGATCTTCCCCTGGCTGACTGAGCACGGAATGTGCATTATGCCCATGCCTAGTAAACAGAAGACATCTCTTATTGCCAAAAAAAAGGCAAAATGGGCCAAGGAACTTCAAAACTTACACTCCACGGTCAATTACGACAAGACTCCAGCAGGGTATCTTGTAGATGGGTCGCAAGAAGACACATGATTTTTATATCATGGAACGTTAGAGGATTGGGCTCATGGAAGAAGAGGGCCCTTATAAAAAATTCTCTCCTCACACAATTCATCTTTGGTGATCCTCCAGGAAACAAAGTTGACTAAGATTGATAGAAGAATGATCAAATCCATCTGGAGTTCTAGAAATATTGCTTGGGCTTCGCGCTATTCAGATGGTGCATCTGGGGGTATTGTCATAATATGGAACGAATCCACCTTCACTGTGTTAGAGGTTATTGAAGGTCTTTTCTCCCTCACCATCCACCTTTCTCTCGCTGATGGCTACTCTTTTTGGATTACAGGGATTTATGGACCTAACATCTCTCGAGACAGGAAGCTTTTTTGGGGAGAGCTTGCTGATTTAGAGGCCCTATGCTTACCTAAATGGATTATTGGTGGTGATTTCAACATCACTCGCTGGTCTTGGGAACGGTCTCCTCCCTCCTTCACCCCAACCCGTGCCACGAGGAAATTCAATCGCTTCATTGCCTCTGCCGCCTTACAAGACCTTCCCCTCTCAAACGGCAAGTTCACTTGGTCTAGTTTCAGGCCAAATCCATCGATGTCGCTTATTGATAGGTTCTTGATCACAGACGAATTATCTACAAAATTTGGAACAACAGTGGTTCGCAAGTTGGATAGAGCTACATCTGATCATTTCCGATTTGCCTCACTCTGGGGAATGAACGCTGGGGTCCTCCTCCATTCAGATTTGTCAATGCTTGGCTATCTCATGCCTCCTTCCTTCACACTGTTGAGTCATGGTGGAAGGCAAACCCATTGTCCGGATGGCCTGGCCATGGTTTTATTCAAAAGCTAA

mRNA sequence

ATGGCCACCTCCTCAGCCCACTCTTTCAAGATCGAAAGAAAAACCTTCTCCATCACTACTGACCAGAAGAACCCTAGTCTCTTCCGACTCACTGAAGCTAGCAAGGAAAAAAGCTTTACTCTGACACTCACAAATGAGACTCTATCTTGGCTCCAATCTTGTTTTGACAGACTTTGCAACCTTCCCCAGACTCAGAAGGATGGTGTAGTCTTACTGCCTGCATTAACTCCCGCAACACCATTTGGGTCAGCAAGGAACCACGGCTGTTTGGGCTCTGCAACAACACTTATCAGATTTGTCTTTAGTCAGCCCCATCCAGCCAGACAAAGCCCTCCTGCTTGTAAAGATGAAGAACAAGCTCGGGTTATAGCCAATATTAAGGGGTGGTATAAGGTTGGAAACTTCCAAGTTCGCTTCTTCCCATGGAGTGCCGAAGCAATGCTGAGTGAACCAAAAGTACCCTCTTACGGTGGCTGGATAAAAGTCAGGAACTTACCATTAGGCAAATGGTCGATCGACATCTTCAAGAAAATAGGAGATGAATGTGGGGGCTATTTGGAAACAGCAAACAAAACCCTATCTCGTTTGGATATGATGGAGATAGGAATCAAGGTCAAGGAAAATCTTTTGGGCTTTCTTCCAGCGATAGTTCACCTCCCCTCAACCTCCAACAGTCCCATATCAGTATCCATCGACCCATTCTTCATGGAGGAATACAACATAGGTTATGTCATCGGTATTCATGGCAAGATACCATCATTTTCGATGGCTTCCAGTGCTACACGCGCCGATGAGAGAATATATGTTGCGGATAACGAACGGGTTTATAACCCACGCGCCACCACTCTGAATGATGAAACAAAAGGGGAAAAGAAACAGGCCACATACAGAAGCGACTTTCCACAGGCCCCAAATGATGTATTGGACACATCCACTGCTCTGATGTCTGCGTCTTTATTTGACAGGGACCCACTGGCGCCGTCTATCACCACAGAGCCCCAATCCCCAAATTCCTCTCTTGATAATCACTCGGTTAAAGTACCCAATAAAACCCTACCTTTTGACGGTAACCAGAGAGGCCCACTTGGCCCACCCAATACCAACCCATCTCACCCACCTGGCCCACCAAAAAGCCCTATCCAATGCTTAGCTGCTCATAGAAAGCCCATTGTTATCAACAATAAAAAAACCTATCTCATCATCGGAAACAAACACTCCACGAATACAGAGCTCCCTGTTTCAGACTCTGAAGGATTTTTATCCTCCTCATGTTCTACCGCCATGATTAGATCCTCAACCTCAACACCTGAAAGAGCGACACAGAACCAGACCTCCCCACCCACGATTAGCAGACTTTTCAAACACAATCAAGAACAAGAGCCTTTTATCGAAGATCCTATTCCCTTGCAAATAGAAGAGCCTCAATCCGATCAGCAGGGAATAGGTTTACAAGACACAGATCTCATTGAGGTTTTTGTGGAAGAAGACGTCTCGGTAGAGTTGTATCCCGAGGACACCAAAATTGACCCAGCTGTATATCTTCCCATGATCTTCCCCTGGCTGACTGAGCACGGAATGTGCATTATGCCCATGCCTAGTAAACAGAAGACATCTCTTATTGCCAAAAAAAAGGCAAAATGGGCCAAGGAACTTCAAAACTTACACTCCACGGTCAATTACGACAAGACTCCAGCAGGGTATCTTGAAACAAAGTTGACTAAGATTGATAGAAGAATGATCAAATCCATCTGGAGTTCTAGAAATATTGCTTGGGCTTCGCGCTATTCAGATGGTGCATCTGGGGGTATTGTCATAATATGGAACGAATCCACCTTCACTGTGTTAGAGGTTATTGAAGGTCTTTTCTCCCTCACCATCCACCTTTCTCTCGCTGATGGCTACTCTTTTTGGATTACAGGGATTTATGGACCTAACATCTCTCGAGACAGGAAGCTTTTTTGGGGAGAGCTTGCTGATTTAGAGGCCCTATGCTTACCTAAATGGATTATTGGTGGTGATTTCAACATCACTCGCTGGTCTTGGGAACGGTCTCCTCCCTCCTTCACCCCAACCCGTGCCACGAGGAAATTCAATCGCTTCATTGCCTCTGCCGCCTTACAAGACCTTCCCCTCTCAAACGGCAAGTTCACTTGGTCTAGTTTCAGGCCAAATCCATCGATGTCGCTTATTGATAGGTTCTTGATCACAGACGAATTATCTACAAAATTTGGAACAACAGTGGTTCGCAAGTTGGATAGAGCTACATCTGATCATTTCCGATTTGCCTCACTCTGGGGAATGAACGCTGGGGTCCTCCTCCATTCAGATTTGTCAATGCTTGGCTATCTCATGCCTCCTTCCTTCACACTGTTGAGTCATGGTGGAAGGCAAACCCATTGTCCGGATGGCCTGGCCATGGTTTTATTCAAAAGCTAA

Coding sequence (CDS)

ATGGCCACCTCCTCAGCCCACTCTTTCAAGATCGAAAGAAAAACCTTCTCCATCACTACTGACCAGAAGAACCCTAGTCTCTTCCGACTCACTGAAGCTAGCAAGGAAAAAAGCTTTACTCTGACACTCACAAATGAGACTCTATCTTGGCTCCAATCTTGTTTTGACAGACTTTGCAACCTTCCCCAGACTCAGAAGGATGGTGTAGTCTTACTGCCTGCATTAACTCCCGCAACACCATTTGGGTCAGCAAGGAACCACGGCTGTTTGGGCTCTGCAACAACACTTATCAGATTTGTCTTTAGTCAGCCCCATCCAGCCAGACAAAGCCCTCCTGCTTGTAAAGATGAAGAACAAGCTCGGGTTATAGCCAATATTAAGGGGTGGTATAAGGTTGGAAACTTCCAAGTTCGCTTCTTCCCATGGAGTGCCGAAGCAATGCTGAGTGAACCAAAAGTACCCTCTTACGGTGGCTGGATAAAAGTCAGGAACTTACCATTAGGCAAATGGTCGATCGACATCTTCAAGAAAATAGGAGATGAATGTGGGGGCTATTTGGAAACAGCAAACAAAACCCTATCTCGTTTGGATATGATGGAGATAGGAATCAAGGTCAAGGAAAATCTTTTGGGCTTTCTTCCAGCGATAGTTCACCTCCCCTCAACCTCCAACAGTCCCATATCAGTATCCATCGACCCATTCTTCATGGAGGAATACAACATAGGTTATGTCATCGGTATTCATGGCAAGATACCATCATTTTCGATGGCTTCCAGTGCTACACGCGCCGATGAGAGAATATATGTTGCGGATAACGAACGGGTTTATAACCCACGCGCCACCACTCTGAATGATGAAACAAAAGGGGAAAAGAAACAGGCCACATACAGAAGCGACTTTCCACAGGCCCCAAATGATGTATTGGACACATCCACTGCTCTGATGTCTGCGTCTTTATTTGACAGGGACCCACTGGCGCCGTCTATCACCACAGAGCCCCAATCCCCAAATTCCTCTCTTGATAATCACTCGGTTAAAGTACCCAATAAAACCCTACCTTTTGACGGTAACCAGAGAGGCCCACTTGGCCCACCCAATACCAACCCATCTCACCCACCTGGCCCACCAAAAAGCCCTATCCAATGCTTAGCTGCTCATAGAAAGCCCATTGTTATCAACAATAAAAAAACCTATCTCATCATCGGAAACAAACACTCCACGAATACAGAGCTCCCTGTTTCAGACTCTGAAGGATTTTTATCCTCCTCATGTTCTACCGCCATGATTAGATCCTCAACCTCAACACCTGAAAGAGCGACACAGAACCAGACCTCCCCACCCACGATTAGCAGACTTTTCAAACACAATCAAGAACAAGAGCCTTTTATCGAAGATCCTATTCCCTTGCAAATAGAAGAGCCTCAATCCGATCAGCAGGGAATAGGTTTACAAGACACAGATCTCATTGAGGTTTTTGTGGAAGAAGACGTCTCGGTAGAGTTGTATCCCGAGGACACCAAAATTGACCCAGCTGTATATCTTCCCATGATCTTCCCCTGGCTGACTGAGCACGGAATGTGCATTATGCCCATGCCTAGTAAACAGAAGACATCTCTTATTGCCAAAAAAAAGGCAAAATGGGCCAAGGAACTTCAAAACTTACACTCCACGGTCAATTACGACAAGACTCCAGCAGGGTATCTTGAAACAAAGTTGACTAAGATTGATAGAAGAATGATCAAATCCATCTGGAGTTCTAGAAATATTGCTTGGGCTTCGCGCTATTCAGATGGTGCATCTGGGGGTATTGTCATAATATGGAACGAATCCACCTTCACTGTGTTAGAGGTTATTGAAGGTCTTTTCTCCCTCACCATCCACCTTTCTCTCGCTGATGGCTACTCTTTTTGGATTACAGGGATTTATGGACCTAACATCTCTCGAGACAGGAAGCTTTTTTGGGGAGAGCTTGCTGATTTAGAGGCCCTATGCTTACCTAAATGGATTATTGGTGGTGATTTCAACATCACTCGCTGGTCTTGGGAACGGTCTCCTCCCTCCTTCACCCCAACCCGTGCCACGAGGAAATTCAATCGCTTCATTGCCTCTGCCGCCTTACAAGACCTTCCCCTCTCAAACGGCAAGTTCACTTGGTCTAGTTTCAGGCCAAATCCATCGATGTCGCTTATTGATAGGTTCTTGATCACAGACGAATTATCTACAAAATTTGGAACAACAGTGGTTCGCAAGTTGGATAGAGCTACATCTGATCATTTCCGATTTGCCTCACTCTGGGGAATGAACGCTGGGGTCCTCCTCCATTCAGATTTGTCAATGCTTGGCTATCTCATGCCTCCTTCCTTCACACTGTTGAGTCATGGTGGAAGGCAAACCCATTGTCCGGATGGCCTGGCCATGGTTTTATTCAAAAGCTAA

Protein sequence

MATSSAHSFKIERKTFSITTDQKNPSLFRLTEASKEKSFTLTLTNETLSWLQSCFDRLCNLPQTQKDGVVLLPALTPATPFGSARNHGCLGSATTLIRFVFSQPHPARQSPPACKDEEQARVIANIKGWYKVGNFQVRFFPWSAEAMLSEPKVPSYGGWIKVRNLPLGKWSIDIFKKIGDECGGYLETANKTLSRLDMMEIGIKVKENLLGFLPAIVHLPSTSNSPISVSIDPFFMEEYNIGYVIGIHGKIPSFSMASSATRADERIYVADNERVYNPRATTLNDETKGEKKQATYRSDFPQAPNDVLDTSTALMSASLFDRDPLAPSITTEPQSPNSSLDNHSVKVPNKTLPFDGNQRGPLGPPNTNPSHPPGPPKSPIQCLAAHRKPIVINNKKTYLIIGNKHSTNTELPVSDSEGFLSSSCSTAMIRSSTSTPERATQNQTSPPTISRLFKHNQEQEPFIEDPIPLQIEEPQSDQQGIGLQDTDLIEVFVEEDVSVELYPEDTKIDPAVYLPMIFPWLTEHGMCIMPMPSKQKTSLIAKKKAKWAKELQNLHSTVNYDKTPAGYLETKLTKIDRRMIKSIWSSRNIAWASRYSDGASGGIVIIWNESTFTVLEVIEGLFSLTIHLSLADGYSFWITGIYGPNISRDRKLFWGELADLEALCLPKWIIGGDFNITRWSWERSPPSFTPTRATRKFNRFIASAALQDLPLSNGKFTWSSFRPNPSMSLIDRFLITDELSTKFGTTVVRKLDRATSDHFRFASLWGMNAGVLLHSDLSMLGYLMPPSFTLLSHGGRQTHCPDGLAMVLFKS
Homology
[Close]
BLAST of Spg030938 vs. NCBI nr
Match: TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 201.8 bits (512), Expect = 2.2e-47
Identity = 183/686 (26.68%), Postives = 295/686 (43.00%), Query Frame = 0 

Query: 120 ARVIANIKGWYKVGNFQVRFFPWSAEAMLSEPKVPSYGGWIKVRNLPLGKWSIDIFKKIG 179
           A ++   KGW  VG + VRF  WS     +   +PSYGGW   R +PL  W++  F++IG
Sbjct: 306 ANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIG 365

Query: 180 DECGGYLETANKTLSRLDMMEIGIKVKENLLGFLPAIVHLPSTSNSPISVSIDPFFMEEY 239
             C G ++ A +T S  +++E  IKV+ N  GFLPA V +     +   V +      ++
Sbjct: 366 KACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKW 425

Query: 240 NIGYVIGIHGKIPSFSMAS--SATRADERIYVADNERVYNPRATTLNDETKGEKKQATYR 299
            I   + +HG     + AS        E+ +   +E +     +T +D  K         
Sbjct: 426 LIERNVRLHGTFKRQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRK--------- 485

Query: 300 SDFPQAPNDVLDTSTALMSASLF-DRDPLAPSITTEPQSPNSSLDNHSVKVPNKTLPFDG 359
           S  P  P       +AL S  +  DR+   PS   E    +S+L  H+    +K     G
Sbjct: 486 SSTPDQP-------SALKSVIIKPDRNATLPSFLNEELVNDSNL--HATANKSKLEILSG 545

Query: 360 NQRGPLGPPNTNPSHPPGPPKSPIQCLAAHRKPIVINNKKTYLIIGNKHSTNTELPVSDS 419
                +             P S +    + RK           +  N  S  T +   DS
Sbjct: 546 ISNDGVLDKGKQKVDIQLQPNSALNLDKSKRK-----------VSFNSPSNKTNIFNPDS 605

Query: 420 EGFLSSSCSTAMIRSSTSTPERATQNQTSPPTISRLFKHNQEQEPFIEDPIPLQIEEPQS 479
                S    +  +    + ER+ + ++S    +   K NQ +  FI  PI +   +  +
Sbjct: 606 APANHSPSLNSPEKKQKVSRERSIKKKSSSTQPNS--KANQNKGVFITQPIQIVAHDRDA 665

Query: 480 DQQGIGL-------------------QDTDLIEVFVEEDVSVELYPEDTKIDPAVYLPMI 539
            ++G+ L                    ++D  EV   +  + E+ PE     P + +P+ 
Sbjct: 666 AKKGLSLTVDLGDLPALDPNKSLEDHHNSDNAEVV--DITNTEVVPE----TPEMKMPVN 725

Query: 540 F-------------PWLTEHGMCIMPMPSKQK---TSLIAKKKAKWAKELQNLHSTVNYD 599
                           + +          K+K   +    K+   W K+   L  + + D
Sbjct: 726 ENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKK-NGLKLSTDTD 785

Query: 600 KTPA--------GYLETKLTKIDRRMIKSIWSSRNIAWASRYSDGASGGIVIIWNESTFT 659
            + A          + + L   ++R+IKS+W S +I W ++ + G+SGGI+I+W+    +
Sbjct: 786 SSGATTSTNVLLNQMNSGLKITNKRIIKSLWPSNSINWIAKNASGSSGGILILWDAQNHS 845

Query: 660 VLEVIEGLFSLTIHLSLADGYSFWITGIYGPNISRDRKLFWGELADLEALCLPKWIIGGD 719
           +L   EGLFSL+ +  L +  S+W+TG+YGP   R+R  FW EL +L+ L    WI+GGD
Sbjct: 846 LLSQEEGLFSLSANFLLNNNSSWWLTGLYGPVKRRERIHFWAELHNLQHLNSFPWILGGD 905

Query: 720 FNITRWSWERSPPSFTPTRATRKFNRFIASAALQDLPLSNGKFTWSSFRPNPSMSLIDRF 760
            N+ R   E S    + +  +R  N FI++  L D PL+N +FTWS+ R  P+ S IDRF
Sbjct: 906 LNVIRMR-EESTSVLSSSHNSRMLNNFISNNLLIDPPLTNNRFTWSNLRNPPTFSRIDRF 952

[Close]
BLAST of Spg030938 vs. NCBI nr
Match: XP_022158956.1 (uncharacterized protein LOC111025405 [Momordica charantia])

HSP 1 Score: 191.0 bits (484), Expect = 3.9e-44
Identity = 91/200 (45.50%), Postives = 130/200 (65.00%), Query Frame = 0 

Query: 569 ETKLTKIDRRMIKSIWSSRNIAWASRYSDGASGGIVIIWNESTFTVLEVIEGLFSLTIHL 628
           ETKL+ +D  ++KS+WS+  I W++  + G + GI+I+WN+      E+IEG+FSLTI+ 
Sbjct: 36  ETKLSYMDILIVKSLWSAHGINWSALDASGMASGILILWNDPDLKAAEMIEGVFSLTINF 95

Query: 629 SLADGYSFWITGIYGPNISRDRKLFWGELADLEALCLPKWIIGGDFNITRWSWERSPPSF 688
            L+DG+ FW++GIYGP+ +    LFW EL DL  LC   WI+ GDFN+TRWSWE+S    
Sbjct: 96  CLSDGFLFWVSGIYGPSTTEFHYLFWQELLDLSDLCENHWILAGDFNVTRWSWEKS-NGR 155

Query: 689 TPTRATRKFNRFIASAALQDLPLSNGKFTWSSFRPNPSMSLIDRFLITDELSTKFGTTVV 748
             T++   FN FI  ++L D+PL+NG+ TWS    N S SLID FL+T+    K G  + 
Sbjct: 156 PLTKSMWLFNSFIEDSSLIDVPLTNGQHTWSR---NTSFSLIDCFLLTNGCIDKLGMPIA 215

Query: 749 RKLDRATSDHFRFASLWGMN 769
           +++ R TSDHF     +G N
Sbjct: 216 KRMTRTTSDHFPILLDFGQN 231

[Close]
BLAST of Spg030938 vs. NCBI nr
Match: XP_022145142.1 (uncharacterized protein LOC111014657 [Momordica charantia])

HSP 1 Score: 190.3 bits (482), Expect = 6.6e-44
Identity = 90/191 (47.12%), Postives = 129/191 (67.54%), Query Frame = 0 

Query: 569 ETKLTKIDRRMIKSIWSSRNIAWASRYSDGASGGIVIIWNESTFTVLEVIEGLFSLTIHL 628
           ETK + I+ + IKS+WSS +IAWAS  + GASGGI+++W++ + + +EVI G FS+++H 
Sbjct: 36  ETKSSSINNKFIKSLWSSISIAWASLDASGASGGIILLWDQLSTSAVEVICGHFSISVHF 95

Query: 629 SLADGYSFWITGIYGPNISRDRKLFWGELADLEALCLPKWIIGGDFNITRWSWERSPPSF 688
            LAD +++W+TG+Y P   + RKLFW EL DL  LC P W++G DFNI RWS E S  + 
Sbjct: 96  KLADNFTWWLTGVYSPVKQKKRKLFWQELFDLNGLCGPIWLLGEDFNIYRWSHETSSAN- 155

Query: 689 TPTRATRKFNRFIASAALQDLPLSNGKFTWSSFRPNPSMSLIDRFLITDELSTKFGTTVV 748
            P     KFN FI  A L D  ++NG++TWS+ RP+  +S I+RFL +   S KF    +
Sbjct: 156 PPQTGMNKFNHFIDFAGLIDPFMNNGQYTWSNLRPHIVLSRINRFLYSKGWSDKFSHHHI 215

Query: 749 RKLDRATSDHF 760
           ++L RA SDH+
Sbjct: 216 KRLPRACSDHY 225

[Close]
BLAST of Spg030938 vs. NCBI nr
Match: KAA0044449.1 (hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa])

HSP 1 Score: 181.8 bits (460), Expect = 2.4e-41
Identity = 164/653 (25.11%), Postives = 285/653 (43.64%), Query Frame = 0 

Query: 115 KDEEQARVIANIKGWYKVGNFQVRFFPWSAEAMLSEPKVPSYGGWIKVRNLPLGKWSIDI 174
           KD+E A+++    GW  VG F V+F  WS  A      +PSYGGW + R +PL  W+++ 
Sbjct: 237 KDKELAKLLCKNIGWTTVGPFYVKFEKWSKNAHADTKVIPSYGGWTRFRGIPLHIWNLNT 296

Query: 175 FKKIGDECGGYLETANKTLSRLDMMEIGIKVKENLLGFLPAIVHLPSTSNSPISVSIDPF 234
           F +IG+  GG+++ A +++++L++ E  IKVKEN  GFLPA + +         +     
Sbjct: 297 FIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQTVTH 356

Query: 235 FMEEYNIGYVIGIHGKIPSFSMASSATRADERIYVADNERVYNPRATTLNDETKGEKKQA 294
              ++       IHG   SF+  +           A+N   +NP A           +Q 
Sbjct: 357 PKGKWLRERNPSIHG---SFTKTA-----------AENFNEFNPYA-----------EQY 416

Query: 295 TYRSDFPQAPNDVLDTSTALMSASLFDRDPLAPSITTEPQSPNSSLDNHSVKVPNKTLPF 354
           T+R +        L  S+   S  + +   + P+ T              +K  NKT+ F
Sbjct: 417 TFRRNLAVIAKPDLPESSKKGSKQMNNDRKMGPTKT--------------IKKFNKTVSF 476

Query: 355 -DGNQRGPLGPPNTNPSHPPGPPKSPIQCLAAHRKPIVINNKKTYLIIGNKHSTNTELPV 414
            + N  G     N++        +S +      ++       +    I  K   +   P 
Sbjct: 477 LNLNYEGDSDNSNSSEKIQKKDHRSEMTEKKKGKQICCGEYNQKISPINTKRKVSFSSPK 536

Query: 415 SDSEGFLSSSCSTAMIRSSTSTPERATQNQTSPPT------ISRLFKHNQEQEPFIEDPI 474
           +++  F + S  T  ++  +       + ++  PT      + R+   + E+E       
Sbjct: 537 NETFLFSAHSAPTKTLKLGSPMSYAKMEAKSKRPTQSIKKKVYRVKSRSMERE---TSQT 596

Query: 475 PLQIEEPQSDQQGIGL-QDTDLIEVFVEEDVSVELYPEDTKIDPAVYLPMIFPWLTEHGM 534
             Q ++ + D     L  D   I +  + D S    PE     P+   P     + +   
Sbjct: 597 SRQKDKGKIDPNEFELVVDLGHISLLSDTDFSC---PESPSYIPSPTSPTESDIVKDSLA 656

Query: 535 CIMPMPSKQKTSLIAKKKAKWAKELQNLHSTVNYDKTPAGYLETKLTKIDRRMIKSIWSS 594
            +M    + +     KKK    +E ++    V++ +    +L+    ++         S 
Sbjct: 657 SMMTCAHEDREK---KKKENIREETED--DEVSFKRKLTDWLKENNLRLAADFNSQFNSV 716

Query: 595 RNIAWASRYSDGASGGIVIIWNESTFTVLEVIEGLFSLTIHLSLADGYSFWITGIYGPNI 654
            N    S  +   + G+  +         +VI+G FS++I +   +G S+W++ IYGP  
Sbjct: 717 TNDRMISILNGPPNVGVENVSE-------DVIDGAFSVSIQVDSNNGASWWLSAIYGPAK 776

Query: 655 SRDRKLFWGELADLEALCLPKWIIGGDFNITRWSWERSPPSFTPTRATRKFNRFIASAAL 714
            ++R LFW EL +L+++C P WI+GGDFN+ RW  E S  +   + + ++FN FI++  L
Sbjct: 777 RKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKN-PASLSMKRFNTFISNCNL 831

Query: 715 QDLPLSNGKFTWSSFRPNPSMSLIDRFLITDELSTKFGTTVVRKLDRATSDHF 760
            D PL+N KFTWS+ R   ++S +DRFL +      F     + L R TSDHF
Sbjct: 837 IDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHF 831

[Close]
BLAST of Spg030938 vs. NCBI nr
Match: KAA0056838.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ99341.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 1.4e-38
Identity = 165/673 (24.52%), Postives = 280/673 (41.60%), Query Frame = 0 

Query: 116 DEEQARVIANIK---GWYKVGNFQVRFFPWSAEAMLSEPKVPSYGGWIKVRNLPLGKWSI 175
           + + A+++ + K   GW  VGN+QV+F  W +        +PSYGGW++ R +PL  W+ 
Sbjct: 224 NSDHAKLLCSNKGANGWSTVGNYQVKFESWDSNLHSFHSVIPSYGGWLRFRGIPLHLWNY 283

Query: 176 DIFKKIGDECGGYLETANKTLSRLDMMEIGIKVKENLLGFLPAIVHLPSTSNSPISVSID 235
           + F+ IG  CGG+L+ A +T+    +++  IKV+ N  GF+PA + +         V   
Sbjct: 284 NTFQHIGSACGGFLDVAKETMQMDKLIDAKIKVRYNYTGFVPASILITDNQGENFIV--- 343

Query: 236 PFFMEEYNIGYVIGIHGKIPSFSMASSATRADERIYVADNERVYNPRATTLNDETKGEKK 295
                                    ++   A+ R  V  N RV+    T   DE      
Sbjct: 344 -------------------------TTVQPAEARWLVERNVRVHGSFRTKAADEFDQHNH 403

Query: 296 QA-TYR-SDFPQAPNDVLDTSTALMSASLFDRDPLAPSITTEPQSPNSSLDNHSVKVPNK 355
            A TY  + F   P +   T       S+ + D  + S  T+ +  NSS   +       
Sbjct: 404 LAETYTYNGFQAIPPEPTRTHG---DYSIHNSDKHSISYHTQAKKNNSSESEYD------ 463

Query: 356 TLPFD---GNQRGPLGPP-----NTNPSHPPGPPKSPIQCLAAHRKPIVINNKKTYLIIG 415
             PFD    ++R   G       + N  H             + R   + N K ++L  G
Sbjct: 464 --PFDQQLSDRRKEKGKAILIINDQNHGH------------YSKRSKRISNRKVSFLSPG 523

Query: 416 NKHSTNTELPVSDSEGFLSSSCSTAMIRSSTSTPERATQNQTSPPTISRLFKHNQEQEPF 475
              S ++   ++     L  S          S P + T+ + +     R+ K  QE    
Sbjct: 524 GIQSNSSNTEINTKGKSLEISTINDQFEKRWS-PRQKTKTKLT----YRIKKDPQESTED 583

Query: 476 IEDPIPLQIEEPQSDQQGIGLQDTDLIEVFVEED-------VSVELYPEDTKIDPAVYLP 535
               +    E  +     + +     +E  ++ +       ++ +    ++K   +    
Sbjct: 584 HNLSLKETGEGSKQMNLSVDMGPISPLESMIQSENNHGLDTLNNQTPDGNSKSTDSAEAK 643

Query: 536 MIFPWLTEHGMCIMPMPSKQKTSLIAKKKAKWAKELQNLHSTVNYDKTPAGYLETKLTKI 595
            +   + E         +K  +   A+  +K AK    +     + +    +L+    K+
Sbjct: 644 NLTVSVKEGA-----DQNKSASRSTAEGNSKDAKTGSEMEIDRAFKEKLVIWLKENELKL 703

Query: 596 DRRMIKSIWSS---------RNIAWASRYSDGASGGIVIIWNESTFTVLEVIEGLFSLTI 655
             +    + SS         +N+  A     G  GGI+++W+++ F V ++  G +S+++
Sbjct: 704 SPKYTNDVPSSSSFPVIVSDQNMDIAGHGPLGDKGGILVLWDDTKFKVNDIKVGNYSISL 763

Query: 656 HLSLADGYSFWITGIYGPNISRDRKLFWGELADLEALCLPKWIIGGDFNITRWSWERSPP 715
           ++   +G ++W+T +YGP    DR   W EL  L++LCLP W+I GDFNI RW  E +  
Sbjct: 764 NILNTNG-NWWLTSVYGPYKYNDRTKLWPELEILQSLCLPNWLIAGDFNIVRWERETNAK 823

Query: 716 SFTPTRATRKFNRFIASAALQDLPLSNGKFTWSSFRPNPSMSLIDRFLITDELSTKFGTT 760
           S    R    FN FI+   L D PL N  FTWS+ R NP+ S +DRFL++      FG  
Sbjct: 824 SL-DKRNMANFNNFISVNELIDPPLLNNNFTWSNLRVNPTYSRLDRFLLSKGWENAFGLH 833

[Close]
BLAST of Spg030938 vs. ExPASy TrEMBL
Match: A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-47
Identity = 183/686 (26.68%), Postives = 295/686 (43.00%), Query Frame = 0 

Query: 120 ARVIANIKGWYKVGNFQVRFFPWSAEAMLSEPKVPSYGGWIKVRNLPLGKWSIDIFKKIG 179
           A ++   KGW  VG + VRF  WS     +   +PSYGGW   R +PL  W++  F++IG
Sbjct: 306 ANLLCQNKGWSTVGKYSVRFEKWSPVYHATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIG 365

Query: 180 DECGGYLETANKTLSRLDMMEIGIKVKENLLGFLPAIVHLPSTSNSPISVSIDPFFMEEY 239
             C G ++ A +T S  +++E  IKV+ N  GFLPA V +     +   V +      ++
Sbjct: 366 KACEGLIKVAEETRSAKNLIEARIKVRYNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKW 425

Query: 240 NIGYVIGIHGKIPSFSMAS--SATRADERIYVADNERVYNPRATTLNDETKGEKKQATYR 299
            I   + +HG     + AS        E+ +   +E +     +T +D  K         
Sbjct: 426 LIERNVRLHGTFKRQAAASFDDFNPESEQFFFEGSEAISPDFLSTSSDGRK--------- 485

Query: 300 SDFPQAPNDVLDTSTALMSASLF-DRDPLAPSITTEPQSPNSSLDNHSVKVPNKTLPFDG 359
           S  P  P       +AL S  +  DR+   PS   E    +S+L  H+    +K     G
Sbjct: 486 SSTPDQP-------SALKSVIIKPDRNATLPSFLNEELVNDSNL--HATANKSKLEILSG 545

Query: 360 NQRGPLGPPNTNPSHPPGPPKSPIQCLAAHRKPIVINNKKTYLIIGNKHSTNTELPVSDS 419
                +             P S +    + RK           +  N  S  T +   DS
Sbjct: 546 ISNDGVLDKGKQKVDIQLQPNSALNLDKSKRK-----------VSFNSPSNKTNIFNPDS 605

Query: 420 EGFLSSSCSTAMIRSSTSTPERATQNQTSPPTISRLFKHNQEQEPFIEDPIPLQIEEPQS 479
                S    +  +    + ER+ + ++S    +   K NQ +  FI  PI +   +  +
Sbjct: 606 APANHSPSLNSPEKKQKVSRERSIKKKSSSTQPNS--KANQNKGVFITQPIQIVAHDRDA 665

Query: 480 DQQGIGL-------------------QDTDLIEVFVEEDVSVELYPEDTKIDPAVYLPMI 539
            ++G+ L                    ++D  EV   +  + E+ PE     P + +P+ 
Sbjct: 666 AKKGLSLTVDLGDLPALDPNKSLEDHHNSDNAEVV--DITNTEVVPE----TPEMKMPVN 725

Query: 540 F-------------PWLTEHGMCIMPMPSKQK---TSLIAKKKAKWAKELQNLHSTVNYD 599
                           + +          K+K   +    K+   W K+   L  + + D
Sbjct: 726 ENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKK-NGLKLSTDTD 785

Query: 600 KTPA--------GYLETKLTKIDRRMIKSIWSSRNIAWASRYSDGASGGIVIIWNESTFT 659
            + A          + + L   ++R+IKS+W S +I W ++ + G+SGGI+I+W+    +
Sbjct: 786 SSGATTSTNVLLNQMNSGLKITNKRIIKSLWPSNSINWIAKNASGSSGGILILWDAQNHS 845

Query: 660 VLEVIEGLFSLTIHLSLADGYSFWITGIYGPNISRDRKLFWGELADLEALCLPKWIIGGD 719
           +L   EGLFSL+ +  L +  S+W+TG+YGP   R+R  FW EL +L+ L    WI+GGD
Sbjct: 846 LLSQEEGLFSLSANFLLNNNSSWWLTGLYGPVKRRERIHFWAELHNLQHLNSFPWILGGD 905

Query: 720 FNITRWSWERSPPSFTPTRATRKFNRFIASAALQDLPLSNGKFTWSSFRPNPSMSLIDRF 760
            N+ R   E S    + +  +R  N FI++  L D PL+N +FTWS+ R  P+ S IDRF
Sbjct: 906 LNVIRMR-EESTSVLSSSHNSRMLNNFISNNLLIDPPLTNNRFTWSNLRNPPTFSRIDRF 952

[Close]
BLAST of Spg030938 vs. ExPASy TrEMBL
Match: A0A6J1E2G6 (uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025405 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-44
Identity = 91/200 (45.50%), Postives = 130/200 (65.00%), Query Frame = 0 

Query: 569 ETKLTKIDRRMIKSIWSSRNIAWASRYSDGASGGIVIIWNESTFTVLEVIEGLFSLTIHL 628
           ETKL+ +D  ++KS+WS+  I W++  + G + GI+I+WN+      E+IEG+FSLTI+ 
Sbjct: 36  ETKLSYMDILIVKSLWSAHGINWSALDASGMASGILILWNDPDLKAAEMIEGVFSLTINF 95

Query: 629 SLADGYSFWITGIYGPNISRDRKLFWGELADLEALCLPKWIIGGDFNITRWSWERSPPSF 688
            L+DG+ FW++GIYGP+ +    LFW EL DL  LC   WI+ GDFN+TRWSWE+S    
Sbjct: 96  CLSDGFLFWVSGIYGPSTTEFHYLFWQELLDLSDLCENHWILAGDFNVTRWSWEKS-NGR 155

Query: 689 TPTRATRKFNRFIASAALQDLPLSNGKFTWSSFRPNPSMSLIDRFLITDELSTKFGTTVV 748
             T++   FN FI  ++L D+PL+NG+ TWS    N S SLID FL+T+    K G  + 
Sbjct: 156 PLTKSMWLFNSFIEDSSLIDVPLTNGQHTWSR---NTSFSLIDCFLLTNGCIDKLGMPIA 215

Query: 749 RKLDRATSDHFRFASLWGMN 769
           +++ R TSDHF     +G N
Sbjct: 216 KRMTRTTSDHFPILLDFGQN 231

[Close]
BLAST of Spg030938 vs. ExPASy TrEMBL
Match: A0A6J1CVN2 (uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014657 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.2e-44
Identity = 90/191 (47.12%), Postives = 129/191 (67.54%), Query Frame = 0 

Query: 569 ETKLTKIDRRMIKSIWSSRNIAWASRYSDGASGGIVIIWNESTFTVLEVIEGLFSLTIHL 628
           ETK + I+ + IKS+WSS +IAWAS  + GASGGI+++W++ + + +EVI G FS+++H 
Sbjct: 36  ETKSSSINNKFIKSLWSSISIAWASLDASGASGGIILLWDQLSTSAVEVICGHFSISVHF 95

Query: 629 SLADGYSFWITGIYGPNISRDRKLFWGELADLEALCLPKWIIGGDFNITRWSWERSPPSF 688
            LAD +++W+TG+Y P   + RKLFW EL DL  LC P W++G DFNI RWS E S  + 
Sbjct: 96  KLADNFTWWLTGVYSPVKQKKRKLFWQELFDLNGLCGPIWLLGEDFNIYRWSHETSSAN- 155

Query: 689 TPTRATRKFNRFIASAALQDLPLSNGKFTWSSFRPNPSMSLIDRFLITDELSTKFGTTVV 748
            P     KFN FI  A L D  ++NG++TWS+ RP+  +S I+RFL +   S KF    +
Sbjct: 156 PPQTGMNKFNHFIDFAGLIDPFMNNGQYTWSNLRPHIVLSRINRFLYSKGWSDKFSHHHI 215

Query: 749 RKLDRATSDHF 760
           ++L RA SDH+
Sbjct: 216 KRLPRACSDHY 225

[Close]
BLAST of Spg030938 vs. ExPASy TrEMBL
Match: A0A5A7TTA1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001820 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-41
Identity = 164/653 (25.11%), Postives = 285/653 (43.64%), Query Frame = 0 

Query: 115 KDEEQARVIANIKGWYKVGNFQVRFFPWSAEAMLSEPKVPSYGGWIKVRNLPLGKWSIDI 174
           KD+E A+++    GW  VG F V+F  WS  A      +PSYGGW + R +PL  W+++ 
Sbjct: 237 KDKELAKLLCKNIGWTTVGPFYVKFEKWSKNAHADTKVIPSYGGWTRFRGIPLHIWNLNT 296

Query: 175 FKKIGDECGGYLETANKTLSRLDMMEIGIKVKENLLGFLPAIVHLPSTSNSPISVSIDPF 234
           F +IG+  GG+++ A +++++L++ E  IKVKEN  GFLPA + +         +     
Sbjct: 297 FIQIGEAYGGFIDAAPESVNKLELTEALIKVKENYTGFLPAFIQIHDEEGHDFIIQTVTH 356

Query: 235 FMEEYNIGYVIGIHGKIPSFSMASSATRADERIYVADNERVYNPRATTLNDETKGEKKQA 294
              ++       IHG   SF+  +           A+N   +NP A           +Q 
Sbjct: 357 PKGKWLRERNPSIHG---SFTKTA-----------AENFNEFNPYA-----------EQY 416

Query: 295 TYRSDFPQAPNDVLDTSTALMSASLFDRDPLAPSITTEPQSPNSSLDNHSVKVPNKTLPF 354
           T+R +        L  S+   S  + +   + P+ T              +K  NKT+ F
Sbjct: 417 TFRRNLAVIAKPDLPESSKKGSKQMNNDRKMGPTKT--------------IKKFNKTVSF 476

Query: 355 -DGNQRGPLGPPNTNPSHPPGPPKSPIQCLAAHRKPIVINNKKTYLIIGNKHSTNTELPV 414
            + N  G     N++        +S +      ++       +    I  K   +   P 
Sbjct: 477 LNLNYEGDSDNSNSSEKIQKKDHRSEMTEKKKGKQICCGEYNQKISPINTKRKVSFSSPK 536

Query: 415 SDSEGFLSSSCSTAMIRSSTSTPERATQNQTSPPT------ISRLFKHNQEQEPFIEDPI 474
           +++  F + S  T  ++  +       + ++  PT      + R+   + E+E       
Sbjct: 537 NETFLFSAHSAPTKTLKLGSPMSYAKMEAKSKRPTQSIKKKVYRVKSRSMERE---TSQT 596

Query: 475 PLQIEEPQSDQQGIGL-QDTDLIEVFVEEDVSVELYPEDTKIDPAVYLPMIFPWLTEHGM 534
             Q ++ + D     L  D   I +  + D S    PE     P+   P     + +   
Sbjct: 597 SRQKDKGKIDPNEFELVVDLGHISLLSDTDFSC---PESPSYIPSPTSPTESDIVKDSLA 656

Query: 535 CIMPMPSKQKTSLIAKKKAKWAKELQNLHSTVNYDKTPAGYLETKLTKIDRRMIKSIWSS 594
            +M    + +     KKK    +E ++    V++ +    +L+    ++         S 
Sbjct: 657 SMMTCAHEDREK---KKKENIREETED--DEVSFKRKLTDWLKENNLRLAADFNSQFNSV 716

Query: 595 RNIAWASRYSDGASGGIVIIWNESTFTVLEVIEGLFSLTIHLSLADGYSFWITGIYGPNI 654
            N    S  +   + G+  +         +VI+G FS++I +   +G S+W++ IYGP  
Sbjct: 717 TNDRMISILNGPPNVGVENVSE-------DVIDGAFSVSIQVDSNNGASWWLSAIYGPAK 776

Query: 655 SRDRKLFWGELADLEALCLPKWIIGGDFNITRWSWERSPPSFTPTRATRKFNRFIASAAL 714
            ++R LFW EL +L+++C P WI+GGDFN+ RW  E S  +   + + ++FN FI++  L
Sbjct: 777 RKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKN-PASLSMKRFNTFISNCNL 831

Query: 715 QDLPLSNGKFTWSSFRPNPSMSLIDRFLITDELSTKFGTTVVRKLDRATSDHF 760
            D PL+N KFTWS+ R   ++S +DRFL +      F     + L R TSDHF
Sbjct: 837 IDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHF 831

[Close]
BLAST of Spg030938 vs. ExPASy TrEMBL
Match: A0A2N9FVR5 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19092 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.1e-39
Identity = 94/231 (40.69%), Postives = 135/231 (58.44%), Query Frame = 0 

Query: 537 TSLIAKKKAKWAKELQNLHSTVNYDKTPA------GYLETKLTKIDRRMIKSIWSSRNIA 596
           T  +AK K + ++EL++L STVNYD   A         ETKL  I R +++S+W   ++ 
Sbjct: 432 TVRMAKSKGRGSRELRSLVSTVNYDTRSARKRVEPRERETKLDLITRSIVRSLWGIHHVD 491

Query: 597 WASRYSDGASGGIVIIWNESTFTVLEVIEGLFSLTIHL-SLADGYSFWITGIYGPNISRD 656
           W+   SDGASGGI+++W+      ++   G FSL+     + D Y +  +G+YGP   R+
Sbjct: 492 WSYLGSDGASGGILLMWDRRVVEKVDEAVGHFSLSCKFRCVEDQYEWAFSGVYGPQTGRE 551

Query: 657 RKLFWGELADLEALCLPKWIIGGDFNITRWSWER-SPPSFTPTRATRKFNRFIASAALQD 716
           R+  W EL+ L +     W +GGDFN+TR+  ER     FTP  A   F+ FI+S  L D
Sbjct: 552 RREMWDELSGLSSWWSSPWCVGGDFNVTRFPSERMGATHFTP--AMNDFSDFISSLGLMD 611

Query: 717 LPLSNGKFTWSSFRPNPSMSLIDRFLITDELSTKFGTTVVRKLDRATSDHF 760
           +PL  G++TWS+ R N +MS IDRFL T E   ++ T V R+L R  SDHF
Sbjct: 612 IPLEGGRYTWSNNRENAAMSRIDRFLYTGEWEDRYPTVVQRRLSRLLSDHF 660

The following BLAST results are available for this feature:
BLAST of Spg030938 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ99315.12.2e-4726.68LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
XP_022158956.13.9e-4445.50uncharacterized protein LOC111025405 [Momordica charantia][more]
XP_022145142.16.6e-4447.12uncharacterized protein LOC111014657 [Momordica charantia][more]
KAA0044449.12.4e-4125.11hypothetical protein E6C27_scaffold46G001820 [Cucumis melo var. makuwa][more]
KAA0056838.11.4e-3824.52LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ993... [more]
BLAST of Spg030938 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg030938 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BLV71.1e-4726.68LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A6J1E2G61.9e-4445.50uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1CVN23.2e-4447.12uncharacterized protein LOC111014657 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A5A7TTA11.1e-4125.11DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A2N9FVR53.1e-3940.69Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
BLAST of Spg030938 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 544..762
e-value: 1.6E-23
score: 85.7
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 569..759
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 127..195
e-value: 9.3E-11
score: 41.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..346
NoneNo IPR availablePANTHERPTHR22748:SF11DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE CHLOROPLASTICcoord: 569..698
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 569..698

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030938.1Spg030938.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
molecular_function GO:0004518 nuclease activity