Spg030923 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030923
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold11: 29995563 .. 29996431 (+)
RNA-Seq ExpressionSpg030923
SyntenySpg030923
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGCGGGTCTTGATGTGTGAGAAGGCATTCTCCACGAAGACAAGTCCTCTCCCAGCATTCATCGAAGATATTTTACACAAGTATGGCTAGGAGCGACTATGCAAGGAGCCAAAGGCTGCATCTATCTCATTGATACGTGAATTATATGGTCAAATAGGGGAAAAAGATGCAAACGACCATTCTTCTACGTGGTCGGGTGGTGGAGTTCTCGGTGAGGCAGATCAATTGGATTTTCTGATTGTCATCCCTCAGATGCCCAGCTGGCAACAAGGCCATTGAAGAACCAACAGATGAACAACTGGCAGAGGCCCTAAAGATGGTGGCCCACGAGGGAGTTAAGTGGCAGGAGTCCAAGACTGGAGTTAGGACTCTACTATCAGGGGATTTGAAGCCATAGGCAGCAGTCTTGCTGTACGTGATCAAGAATAGGATCATGCCAACAACACATGACACCACCATATCTCAGGAGCGTGTCATGTTGTTGTATAGCATGCACAGGGGATTGGATTTGAACCTTGGACGAATCATATGGATGAAGATCCTCTCTTGTTGGCACAAAAATGTGGGAAGGTTATTCTTCCCAACCTTGATCACCAAGATATGCAGGCTTGCAGGAGTGGAGCCAAAAATGAAAGAAGAGAAAGACACTGCCCGGACTTCGATTGACTTGAGCTTAATCTAGAAGCTCATAACCAAAGCAGAAGGTGACTTCTCCTGAAAAGAAGGCTCAATCAACCCCTCCTGTAGCTCAAACCTCGAAATCTCCTGAGGAAGCCACTGCTGCAAGAGAGGATGTGACTGCAAACCCATCGCATAATTCACCAGATGCGGCTGCAAATCTACAGCAACCTTCGGTCCCTTAG

mRNA sequence

ATGAAGAAGCGGGTCTTGATGTGTGAGAAGGCATTCTCCACGAAGACAAGTCCTCTCCCAGCATTCATCGAAGATATTTTACACAAATGCCCAGCTGGCAACAAGGCCATTGAAGAACCAACAGATGAACAACTGGCAGAGGCCCTAAAGATGGTGGCCCACGAGGGAGTTAAGTGGCAGGAGTCCAAGACTGGACATGCACAGGGGATTGGATTTGAACCTTGGACGAATCATATGGATGAAGATCCTCTCTTGTTGGCACAAAAATGTGGGAAGAAGGTGACTTCTCCTGAAAAGAAGGCTCAATCAACCCCTCCTGTAGCTCAAACCTCGAAATCTCCTGAGGAAGCCACTGCTGCAAGAGAGGATGTGACTGCAAACCCATCGCATAATTCACCAGATGCGGCTGCAAATCTACAGCAACCTTCGGTCCCTTAG

Coding sequence (CDS)

ATGAAGAAGCGGGTCTTGATGTGTGAGAAGGCATTCTCCACGAAGACAAGTCCTCTCCCAGCATTCATCGAAGATATTTTACACAAATGCCCAGCTGGCAACAAGGCCATTGAAGAACCAACAGATGAACAACTGGCAGAGGCCCTAAAGATGGTGGCCCACGAGGGAGTTAAGTGGCAGGAGTCCAAGACTGGACATGCACAGGGGATTGGATTTGAACCTTGGACGAATCATATGGATGAAGATCCTCTCTTGTTGGCACAAAAATGTGGGAAGAAGGTGACTTCTCCTGAAAAGAAGGCTCAATCAACCCCTCCTGTAGCTCAAACCTCGAAATCTCCTGAGGAAGCCACTGCTGCAAGAGAGGATGTGACTGCAAACCCATCGCATAATTCACCAGATGCGGCTGCAAATCTACAGCAACCTTCGGTCCCTTAG

Protein sequence

MKKRVLMCEKAFSTKTSPLPAFIEDILHKCPAGNKAIEEPTDEQLAEALKMVAHEGVKWQESKTGHAQGIGFEPWTNHMDEDPLLLAQKCGKKVTSPEKKAQSTPPVAQTSKSPEEATAAREDVTANPSHNSPDAAANLQQPSVP
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030923.1Spg030923.1mRNA