Spg030868 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030868
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold11: 26807784 .. 26813547 (+)
RNA-Seq ExpressionSpg030868
SyntenySpg030868
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCAGCCGAAGGCCAGCGTCGAGACGCTAGGTCGCAGCGTCTCAACGCTGCAATGTCGTGGGCACCAAGTTATTCGAGGGCAAGCATCGAAACGCGAGCCAACAACGTTTCAAAGCTGAGGGGGATTGAGACACTATAAATAGGATGTTTGGCTACAAGAATTTTCATCAAGCAAGAAATGAAGCAAGGCTCAAAGAGCTGATTTTTTGTTGGGAAGAGAGTGAGAGAGAGTAGTTTTTAGAGATAGTTTTTGGGCATTCTTGGGGAGGATCAGGAGTTTGCTCGGGTTTCGATCGAGGCTTAGATCGTGACGGATCAAGGGCGTAAGTAAGGGATTTGTCATCGATTTAATTTGTATTCCATACTCTTGTCCATTTACTGTTTTTACAATGTATATGCTGTAAATTTTGGTGCTCATAGTGACAATTTATAGCAAAACTCCCAGCATTTGGGTCTTGAATGAAGAAATACAATTGAAATGTTGTTTTGATTACTCTCTATTGTGTCCATATTACTAGTTATTTGTTTGGGTGCTCTTAATGCTTTATAAATTTGGCCAGAATTCTGGCCAAGTTTATGATGAATTGTTACTTAGTTGAAACTCGACGGAGAGAAGCTAGGTTAGAACGTAGCCCATGGCACTAGGCTTAATTGCTCGAAGTGACAACGAGATTAGTTGGTTAGATTTAGAGATCGATAATTAACCAGAACTTATTAATTAACCCATTTAATGGCGCTAAGGACACTTAGATTGTTAAAATGAGTTAATTAGAATTAGGGGAAACCTACAGAAGAACCTATGTTTACCAGGAGGTTCTAGATTAATAATTAGATTCGACATGATATTTAGTGATTAGAATAAATGTTTAATTGTATTTTGGAATTCAAGACCCCGCCACTCATTTAACTTGACCTCCTTCACTTGTTACCGAATTTCTTGATCAAATTTACCTCTATTGTTTTATTGTTTTTGATAAGGGCAAAAAATATACCTATTTTGCCCTTAGATTTAGCTTATTTCCTTGTGAAACTCGTATGTTTTAGATAAAAAACACTATTCTCGAGCTTAAAATTGTTAAAGTTGATAAATTAGGAAGTTGAGAGTCATGTGTGTCAAATTATGCATATTTGTGTTTAAAAGAACTCATTTTGGTGTGAATTTGACTTGGTTTTGGTGTTTTGCAGAAAACAAAGGAATCAGGCAAAATTCTCAGAAATGCGACCGCATTTCTGGCAAGGCTAAAGTGATATGCGACCACATTTCTGGACAGAGGCAGACAGTTCCGAGTTCATCGTGGGTTGTTTTGAACGAGCTTTTTGTGCACCTAACCGGCTGTTTTGACTCCGAAACTGACTGAGGCACCTGCAAGCACCATTTTTGTGACTCCGCAACCACTTCCCACGCTATAAAAGGCCACGATTCGAAGGCAAATTCAAGCAGAACTCACTGGGAAGAAGAGAGTTGTGACAGAACCCTAGTAGACACCTATGAGTAGGGATGCTCGAGGTCCTTGCTTGAAGACAAAATTCTAACCTTAGTTAGACATCAAACCCGAGTGTTTGTAGAGATTTCACCCTATTTCCACCTTGTAAAAGGAGAGTAGAGTGTCGTGAGAACTCTAAAAGGATTGGATAAAAGTAAAAAACCCTAGTTTTATTTTCGAGCACTTGTTCTTTTCATTATTTTTGTATTCCATATTAATTATTTCAATGAAAAGTTATTCATTTGCATTATTATCCATCATGCATAGCTAAGTTCCATTGAGGGGTTCGATATAGTGAATTCCCCTTATAGTTTAAATGGCTTGAAAGTTGCTTATTTGCCTAAGTTCTATTTATCGCATGTCATCCTTTATTGATTATCACTCTAACCTTGCTAAGTTTAACTTGATCACGTAGACTTTGCATTTTATGTGAATTTGATATTGAAAGTGTAAACCCGAGACCTTCCTTGGATTATTTGCTCTTGTCACATATTGTAGGAAGTTGGATTAAAGTTGTTGTTTCATTGTTGAAGAAAAATGACAAAGCTTTTGGTTGAGGTTGTCTTTGATAATTTTGGAGTTTATTTAAAGGAAAAAGAAAATAAAGGAAACAAAGAAAATGAAAGGAAAAGAGAAGAAAATAGGAAAAGAAAAAAGAAAAAAAAAAAGAAAATGAAATGAAAAAAAACAAACGGTGCTTAGTGGTTAAATACCCATTTTCGGTGCTAGAAGAATCCACCACCGCCTAAAGTGATTCCCACCCATTTTCTTTATCATTTCCCATCAAAATTTCAGAACCTTTCGAGAGAGAGAGTGAAGGAAGAAGGAGAGGGAGCTTGCTGGAGTTTTGAGGTTGAAGAAGAGAAGGGAAAGCTCATGCAAGTGCAACCATGACAGAATCTTGGTTCAATCTGCCTATCTCTGGTTTTTAATTCGGTTTGAGCTACACTAGAAGAACTAAGAGGTGAGGCTTGACTTTCTTGAGAGTTAATTCATTTTTTTTTATCAAATTTCATGAAGAAAGCTTGAGCTAATTCTGATGTTAAGTTAATGATTTTTGAAGAGGAAAACAGAGCGCAAAATTTTCGTGCAAATCTGAACTGTCTCTGGTTTTCTCTGGTTTTTCGAACGTTCTGGGGTGTACAAATTGAATTAGAAGCTCACTTTGGTATGGTTGGAAATCATATTTAATTTCCTATGACTTTCATGAAGAATTCGTGAGCCACAAATGACTGGAAGTAGGTTTAATTTCAGGAGAAAAGTAGAAGGTAGCAGGAAGCACGAATTTGGAATAGCTGTGTTCGGGGGATTTCTGGACAAATCCATTAGGAATCTCATTTTCATTCTTTGCAGTAAGTTGTACAGGGTTCCAAAATTAAGAGTTTGATATATAGTACATTAATTTTGGTCAAGTATTGAGGAAGTTATGAGTGTTTGAAGTTAGGGTATTGAATCTGGAAAATCTGGAAAAGTGTGGAATGTGATTTTAATTATAGAGTTGAGAATTCATGAGCATAGAAAGTGATAACTCTTAGAAATAAGAGTTATTGGCCATTCTTTTAGGGCTTTTAGGCTTGAGTTTACCTTAAGTTGATGCTATTTGAGTTGGGTATTGATGAATTTTTTGGTGTTTAATGAAAATGCTTATTGATGGCTTTAAGTGTTTAATTTCCCGTTAATTTCGGATTTAAACTGATTTGGAGTTCCAGTTTTCTTTGCAGACTATGCTGTAGCATGAGCTGGAAAAGGCAGAATAGCAGCTGGAGCTGATTTACACGTGGAAGGCTTCATTAATTGATGTGGCATTCCCAGCTGGAGGCTGAAGCTATTTTCAGCCATTAGAATGATTTCCAAGTGGGCAAGGCTTGTCTAATCAGCCCTGAATCCCACAAATATGGCTGGGTATAAAAGAAAAGAGGCCCTAATTAGGAAAGCAAGCTGAAAAGAGGGGAGACTGACCATTGGGAGCTGATTTTGGAGCAAAAACAGAGGAAAAGAAGAGGAGGGCTGCCGTGGAGCTATTATTCAGCTTGGGAAAGCTGGATTTTATCTTGGGCACTTCTTCTTTAGTCTTTTCTTCTCATCTTTTATCTCCCTATTGAAATTAGTTGTGGTAGAGGCTGAAAACATGTTGTGTATGAGCATTTTCTGCTATATTGAACTTGTTTCTTCTTTGATCATGAACTAATCCTCTTTGGGTGAGGATTAGGGAGCTTATATTGTAACGAGGGGTTGTTGTAGTTGAACCATGCTAATTTCATCTTAAAGTAGAGTGTGTTTCATTGTTAAAGCTGGAATTTCGTTTGGCCAACCATTTTCTAGCATTGTTATTGATTGTTTGGGAAAACATTTAATAACCGATTACTTTACTTTACCTTAGTCTTTGATGATCATGAAAATGAGTGGGTATTTAGGGATAAATCACCACCTAGGGCACTAATCAGATTGAGCTAATAATAAGGGGTTAAATGGGAGTTTAATCGCCTTAATCTTTGGAGAGTTGGAAAATTCCCATTGAAAAATCTGGGTGAGATGGATTAACACAGTTTTTGCTATAGCAATCCCTGGAAACAATACAGAGTATCCCTAATCCGAGCCTTAATTCTCCTCTGCTTTCAGCCGTTTTTCTTGCATTATTTGCTTTCAATACTCTTTAATTTCATCCAAGTTAGTTTACATTTGTGCACTTTAGTTAGTAAATGATATTTTTGTCCTTGGTTACTTGAATTTCGCCGAAAATCACGCTTAGAAGTAGTAAATTTCATTAACTTAATCCCTGTGGAGACGATCTCGAATTACTTATCACTTGCTACCATGATGTGTATACTTGCACGTTTTTGAGCTATTTGTGAAGATTTCTTGCATAATTATAATCACATTGCACAAGGCAACACGTTTTTGACAAGACTATTTAAGGTTCTGATTCACGGTTTTGGTTTGTTTGACAGGCCAAGAGGAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGACTGTGAGTGAAAAAACAAATTTCGAAAATGATTTCTAAACTGTTCTTATGCTTAAATGGTTTACATGCTTGAATCTGAACTTATGAATGATACATGTTTTCTATGAATGGTTTCAAGCATATGTTTTGAGCTTAGATTTTCTAATGAGGTTTATATATGAGCACGTGGTTATTGACTTTCTGAAAAGTAGTTGAAACGATATCATTTTAAGCAAAGTATGTATTAGCGAGTATTGTTTAAAGATTTTCAGTTTTTCACGAGCAAGCTGAGTAAGATTGAGTTTTACGAAAGATAAAGATAAGCAGACATGTTTTAATGTTTTCATGTGATTTTCTGAGACTTCTAATGACTACATGACTGAGATATTGAGCCCGAGGCTAGATGGTACCGTGTGCACACAAGTTATATTCCGTTGTTGACGTTGAGTGTACTTCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGACGGGCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTATTGGGCGTGCCCTACACAACATAGATCTGTCATGTTAGTTAAAATGTTTGATATACTTGATATGCCTTGCTAGATTTTAATGACATACTTGCAGAGTATTTGAGAAAGCTTTTATGATTACACGTTTATGCTTAACGCTTTGATTAAAAAAATTTATATGCTTAAGGTTTACCATGTGTTCTGATTTGTGGATTAACAATTTTAAATCTAGTCACTCACTGGGCTTCATAGCTCACTCTTTCAAAATGTTTTCCCACTTTTCAGGTAGAGATCGAGCTCTCGATGCCTGATAAACTACCAAAGTCTGCTAAAAGCTTCCAGGCCAAGCTCCAGTACGTGGGTGGAGTTGTACATCGAGTTTGTTTATATTGTAAATGTCTTTGTAAGGATTGGATAGTTTACGGCTTGTGTAAGCTCTAGATGTTGTGGTTTTATAAACCCTAGTTGGATATGTTTTTGGTTGTGATGTCTCTATCAGGTTTATTTTCCAAAGTGAATTAATTCAGGACTGCACTTCATGTATGTTTAAAGGTTATCAAGGTTCCATTGTGTTGTGTTGCATGTAAAGTATTCCATATCTAAGAATAGCATGTTTATCAGGTTCAACGATTCAGCAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTTCTGGACTAAGCTAGTAGGTAGTTCGGGAGGAGGTGTGACAAAAAGGGTCAAACAACATCGGTTCTCATAA

mRNA sequence

ATGTTCCAGCCGAAGGCCAGCGTCGAGACGCTAGGTCGCAGCGTCTCAACGCTGCAATGTCGTGGGCACCAAATCGTGACGGATCAAGGGCAAAACAAAGGAATCAGGCAAAATTCTCAGAAATGCGACCGCATTTCTGGCAAGGCTAAAGTGATATGCGACCACATTTCTGGACAGAGGCAGACAGTTCCGAGTTCATCAATTCGTGAGCCACAAATGACTGGAAGTAGGTTTAATTTCAGGAGAAAAGTAGAAGGTAGCAGGAAGCACGAATTTGGAATAGCTGTGTTCGGGGGATTTCTGGACAAATCCATTAGGAATCTCATTTTCATTCTTTGCAGTAAGTTGTACAGGGGTATTGAATCTGGAAAATCTGGAAAAGTGTGGAATGTGATTTTAATTATAGAGTTGAGAATTCATGAGCATAGAAAGCCAAGAGGAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGACTGTAGAGATCGAGCTCTCGATGCCTGATAAACTACCAAAGTCTGCTAAAAGCTTCCAGGCCAAGCTCCAGTTTATTTTCCAAAGTGAATTAATTCAGGACTGCACTTCATGTTCAACGATTCAGCAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTTCTGGACTAAGCTAGTAGGTAGTTCGGGAGGAGGTGTGACAAAAAGGGTCAAACAACATCGGTTCTCATAA

Coding sequence (CDS)

ATGTTCCAGCCGAAGGCCAGCGTCGAGACGCTAGGTCGCAGCGTCTCAACGCTGCAATGTCGTGGGCACCAAATCGTGACGGATCAAGGGCAAAACAAAGGAATCAGGCAAAATTCTCAGAAATGCGACCGCATTTCTGGCAAGGCTAAAGTGATATGCGACCACATTTCTGGACAGAGGCAGACAGTTCCGAGTTCATCAATTCGTGAGCCACAAATGACTGGAAGTAGGTTTAATTTCAGGAGAAAAGTAGAAGGTAGCAGGAAGCACGAATTTGGAATAGCTGTGTTCGGGGGATTTCTGGACAAATCCATTAGGAATCTCATTTTCATTCTTTGCAGTAAGTTGTACAGGGGTATTGAATCTGGAAAATCTGGAAAAGTGTGGAATGTGATTTTAATTATAGAGTTGAGAATTCATGAGCATAGAAAGCCAAGAGGAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGACTGTAGAGATCGAGCTCTCGATGCCTGATAAACTACCAAAGTCTGCTAAAAGCTTCCAGGCCAAGCTCCAGTTTATTTTCCAAAGTGAATTAATTCAGGACTGCACTTCATGTTCAACGATTCAGCAGGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTTCTGGACTAAGCTAGTAGGTAGTTCGGGAGGAGGTGTGACAAAAAGGGTCAAACAACATCGGTTCTCATAA

Protein sequence

MFQPKASVETLGRSVSTLQCRGHQIVTDQGQNKGIRQNSQKCDRISGKAKVICDHISGQRQTVPSSSIREPQMTGSRFNFRRKVEGSRKHEFGIAVFGGFLDKSIRNLIFILCSKLYRGIESGKSGKVWNVILIIELRIHEHRKPRGNRPSLQTRELAKTVEIELSMPDKLPKSAKSFQAKLQFIFQSELIQDCTSCSTIQQGQQVSLEEDDVCWLHAIFWTKLVGSSGGGVTKRVKQHRFS
Homology
[Close]
BLAST of Spg030868 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-11
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 0 

Query: 145 PRGNRPSLQTRELAKTVEIELSMPDKLPKSAKSFQAK----LQFIFQSELIQ-------D 204
           PRGNRP+L T +L KTVEIEL +PD LP SA+S ++     L+  F+S  ++       D
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHVEMLFYKPSD 138

Query: 205 CTSCSTI-QQGQQVSLEEDDVCWLHAIFWTKLVGSSGGGV 233
               S +  +G    +  DD+CWLHA+FW K  GS GGGV
Sbjct: 139 VRVASYVCWEGSAGIVRGDDLCWLHAVFWAKTAGSPGGGV 178

[Close]
BLAST of Spg030868 vs. NCBI nr
Match: KAA0064296.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01032.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 4.9e-11
Identity = 53/136 (38.97%), Postives = 66/136 (48.53%), Query Frame = 0 

Query: 115 KLYRGIESGKSGKVWNVILIIELRIHEHRKPRGNRPSLQTRELAKT-------------- 174
           KLY  IESGKSG                 KPRGN+PSLQT EL KT              
Sbjct: 542 KLYLDIESGKSG-----------------KPRGNKPSLQTGELDKTVIFPLSTFSVLHDN 601

Query: 175 ---VEIELSMPDKLPKSAKSFQAKLQFIFQSELIQDCTSCSTIQQGQQVSLEEDDVCWLH 234
              VEIELS+PD LP SA+S+ +   + F ++++        +  G    +  DDVC LH
Sbjct: 602 DAVVEIELSVPDTLPTSAESYGSNSSY-FTNQVMSGLHLVFNVSVGSTGIVRGDDVCCLH 659

[Close]
BLAST of Spg030868 vs. NCBI nr
Match: TYK15867.1 (hypothetical protein E5676_scaffold637G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-10
Identity = 59/150 (39.33%), Postives = 68/150 (45.33%), Query Frame = 0 

Query: 115 KLYRGIESGKSGKVWNVILIIELRIHEHRKPRGNRPSLQTRELAKT-------------- 174
           KLY  IESGKSGK W+V+            PRGNRPSLQT +L KT              
Sbjct: 49  KLYWDIESGKSGK-WDVV------------PRGNRPSLQTGKLDKTVIFLLSMLSVLRDN 108

Query: 175 ---VEIELSMPDKLPKSAKS--------FQAKLQFIFQSELIQDCTSCSTIQQGQQVSLE 232
              VEIEL +PD LP SAKS        +   L        ++     S ++    V  E
Sbjct: 109 NTVVEIELPVPDTLPTSAKSSRQTPVRGWSCILSMFMLKCFVRLFYKPSDVRAASYVCWE 168

[Close]
BLAST of Spg030868 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-10
Identity = 57/151 (37.75%), Postives = 73/151 (48.34%), Query Frame = 0 

Query: 115 KLYRGIESGKSGKVWNVILIIELRIHEHRKPRGNRPSLQTRELAKT-------------- 174
           KLY  IESGKSGK W+V+L            RGNR SLQ+ EL  T              
Sbjct: 44  KLYLDIESGKSGK-WDVML------------RGNRSSLQSGELDTTVIFPLSTLSVLRDN 103

Query: 175 ---VEIELSMPDKLPKSAKSFQAK----LQFIFQS-----------ELIQDCTSCSTIQQ 234
              VEIEL +PD LP SA+S ++     L+  F+S           +++       ++  
Sbjct: 104 DAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLV 163

[Close]
BLAST of Spg030868 vs. NCBI nr
Match: TYK26572.1 (putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-10
Identity = 57/151 (37.75%), Postives = 73/151 (48.34%), Query Frame = 0 

Query: 115 KLYRGIESGKSGKVWNVILIIELRIHEHRKPRGNRPSLQTRELAKT-------------- 174
           KLY  IESGKSGK W+V+L            RGNR SLQ+ EL  T              
Sbjct: 44  KLYLDIESGKSGK-WDVML------------RGNRSSLQSGELDTTVIFPLSTLSVLRDN 103

Query: 175 ---VEIELSMPDKLPKSAKSFQAK----LQFIFQS-----------ELIQDCTSCSTIQQ 234
              VEIEL +PD LP SA+S ++     L+  F+S           +++       ++  
Sbjct: 104 DAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLV 163

[Close]
BLAST of Spg030868 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-11
Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 0 

Query: 145 PRGNRPSLQTRELAKTVEIELSMPDKLPKSAKSFQAK----LQFIFQSELIQ-------D 204
           PRGNRP+L T +L KTVEIEL +PD LP SA+S ++     L+  F+S  ++       D
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHVEMLFYKPSD 138

Query: 205 CTSCSTI-QQGQQVSLEEDDVCWLHAIFWTKLVGSSGGGV 233
               S +  +G    +  DD+CWLHA+FW K  GS GGGV
Sbjct: 139 VRVASYVCWEGSAGIVRGDDLCWLHAVFWAKTAGSPGGGV 178

[Close]
BLAST of Spg030868 vs. ExPASy TrEMBL
Match: A0A5A7VD33 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00370 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-11
Identity = 53/136 (38.97%), Postives = 66/136 (48.53%), Query Frame = 0 

Query: 115 KLYRGIESGKSGKVWNVILIIELRIHEHRKPRGNRPSLQTRELAKT-------------- 174
           KLY  IESGKSG                 KPRGN+PSLQT EL KT              
Sbjct: 542 KLYLDIESGKSG-----------------KPRGNKPSLQTGELDKTVIFPLSTFSVLHDN 601

Query: 175 ---VEIELSMPDKLPKSAKSFQAKLQFIFQSELIQDCTSCSTIQQGQQVSLEEDDVCWLH 234
              VEIELS+PD LP SA+S+ +   + F ++++        +  G    +  DDVC LH
Sbjct: 602 DAVVEIELSVPDTLPTSAESYGSNSSY-FTNQVMSGLHLVFNVSVGSTGIVRGDDVCCLH 659

[Close]
BLAST of Spg030868 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-10
Identity = 57/151 (37.75%), Postives = 73/151 (48.34%), Query Frame = 0 

Query: 115 KLYRGIESGKSGKVWNVILIIELRIHEHRKPRGNRPSLQTRELAKT-------------- 174
           KLY  IESGKSGK W+V+L            RGNR SLQ+ EL  T              
Sbjct: 44  KLYLDIESGKSGK-WDVML------------RGNRSSLQSGELDTTVIFPLSTLSVLRDN 103

Query: 175 ---VEIELSMPDKLPKSAKSFQAK----LQFIFQS-----------ELIQDCTSCSTIQQ 234
              VEIEL +PD LP SA+S ++     L+  F+S           +++       ++  
Sbjct: 104 DAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLV 163

[Close]
BLAST of Spg030868 vs. ExPASy TrEMBL
Match: A0A5D3DSY7 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001810 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-10
Identity = 57/151 (37.75%), Postives = 73/151 (48.34%), Query Frame = 0 

Query: 115 KLYRGIESGKSGKVWNVILIIELRIHEHRKPRGNRPSLQTRELAKT-------------- 174
           KLY  IESGKSGK W+V+L            RGNR SLQ+ EL  T              
Sbjct: 44  KLYLDIESGKSGK-WDVML------------RGNRSSLQSGELDTTVIFPLSTLSVLRDN 103

Query: 175 ---VEIELSMPDKLPKSAKSFQAK----LQFIFQS-----------ELIQDCTSCSTIQQ 234
              VEIEL +PD LP SA+S ++     L+  F+S           +++       ++  
Sbjct: 104 DAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVMSRLHLVFSVLV 163

[Close]
BLAST of Spg030868 vs. ExPASy TrEMBL
Match: A0A5D3CVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00440 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-10
Identity = 59/150 (39.33%), Postives = 68/150 (45.33%), Query Frame = 0 

Query: 115 KLYRGIESGKSGKVWNVILIIELRIHEHRKPRGNRPSLQTRELAKT-------------- 174
           KLY  IESGKSGK W+V+            PRGNRPSLQT +L KT              
Sbjct: 49  KLYWDIESGKSGK-WDVV------------PRGNRPSLQTGKLDKTVIFLLSMLSVLRDN 108

Query: 175 ---VEIELSMPDKLPKSAKS--------FQAKLQFIFQSELIQDCTSCSTIQQGQQVSLE 232
              VEIEL +PD LP SAKS        +   L        ++     S ++    V  E
Sbjct: 109 NTVVEIELPVPDTLPTSAKSSRQTPVRGWSCILSMFMLKCFVRLFYKPSDVRAASYVCWE 168

The following BLAST results are available for this feature:
BLAST of Spg030868 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052218.12.9e-1145.00uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0064296.14.9e-1138.97putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK... [more]
TYK15867.14.2e-1039.33hypothetical protein E5676_scaffold637G00440 [Cucumis melo var. makuwa][more]
KAA0062409.14.2e-1037.75reverse transcriptase [Cucumis melo var. makuwa][more]
TYK26572.14.2e-1037.75putative Retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of Spg030868 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg030868 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UAH61.4e-1145.00CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7VD332.4e-1138.97Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=... [more]
A0A5A7V9N32.0e-1037.75Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
A0A5D3DSY72.0e-1037.75Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5D3CVC02.0e-1039.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Spg030868 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030868.1Spg030868.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity