Spg030824 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030824
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold11: 27244525 .. 27249252 (+)
RNA-Seq ExpressionSpg030824
SyntenySpg030824
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAGACTCACGAAGGCCCACGGTTAAGACCTCGGAGCAGACCCACGGTGAAGACCCACCTTGCGCGCGAAGACCCACAAGTCTTCCTCTTAACTTCGATTCTCTCCTCGCACGAAGACCGACGCCTTCTTCACTGGTTTTTTTTTAAAAAAAGGAGGTGGGGTTTCCCCCTTCGAATCCAGCTGAAACGAGCCCAGATCTGGGCTCGTTCCAGATCTGGAACAGCTGGATTCGAAGGGGGATTCACCGTTTTGTCGCAATATGCGAGGGCGAGGTTGACGAGACCAGCGAGCGAGTTCAGAGGGGAGAAAGGGGCGGAGCTGCTCAACTATTTTTTTTGTTCGAACGGGTCGCAGACGGGGACGACAAGGGAGAAGAACAAACAGTGAGTCGAGAAGGTTTGGTGGTGCTGACGACGGTGGTGTTTGTAGCTTACATGTGCGGTCCCTCCCTCCTCGTTTCGTCTTTTTTTTTTAAAAAAATAGAAACTTTAGAGAATATGAAAGAAGGAAGAAGAAGAGAAGAGAGAGAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTGGCCGCTGGCAACCAGCAGTTGCCGGCGGTAGGGTTGGGAAAGAAGATGGGATATGAGATATGGAGAAGAAGATGAAAAAGGGGTATGGAGAAGAAGAATGAAGAAGAAGGAAAAGAAAAGAAATACTAATAAAAATATATATTTTTTAATTAATTTATTATTATTTTATTAAAAAATAAAAAAATAATTTTTTATTAAAAAATAGTACCACGTCAGCAAACTGTTAGGGTTTAATAGAAAATTTGACGGAGGGACCAAAAGTGTAATGAAATCCAAACCTAAGGGGCTAAATTGTTGAGTTTGAAAACTTAGGGACCGAAATGAAACCTAACCCAAACCTCAGGGACTAAAAGTGTATTTTTCCCTTTTTTTAAAGAGTTTTAAAATATAACATTGATCTTTTCAAACTTATGAGCGTAACCCATATGTTTTCAGTTTAATATTTTTGAGCTGCATGTGATAATTTTGTGTGAGCCAAGGAGGTAAATGAGCAAAATGAGCTTAGCTACGCTATTTTGCAAGTTAAGCAACTATTTGGAGTGCAGAGTTGGTTATAATAGTATGTAGTTATTATTGTTTGAAGGTTATAACAGTTGGAGTTGAATAATCTGTTTGGGGCAGAATATTTTAGTCTGTTTGGGGTGTAGAGTTGGTTATAATAGTCGGGGGTTATAACTATTTATTTCTTTTTCTATTGTTATTATTTTTATGATGAGAATAGTAAATATGACAATCAATTTTGCTATCTATTCTAATTTTTGAAAAAAATAACTCCTAAAATGTATTAATTATAAAAAAGTCATTAAATGCCAACATATAGAGTGAGACATCTTATTTTAACCCCAACAAAAAAAAAAAAAAAAAAAAAATAGACCATTAAATAAAAATTTCAAACTTTTCTAATGTTTAACATCTAATTAAAAAAAAACTCAATCAAAAAGCAAGATATGCAATTGTTGGGTTTTATGTCCTAAAACTCATAGTTTGTAATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAGAAACAAAATTCATTAATTAGAAATAGAAATGTTTAAAGAGGTATCACCAATGGGACAGGAACCCCCATTATTGTGATGAACACAACTAGTGTCTACAGCATTGGTAGACAGAATCCAATTTGGAAACGAATTAGCCCATGTATTGGAGCTATTTTCCTCACAAGCCCTGCAGGCCATAATGTGGGCCATTTGATTTCATTACAAGTTTTCATCTCCAGACTGATGGTCAGACAGAGAGGTTGAATCAGACATTAGAAGGCATGTTGCGAGCGTGTGCACTAGACTTTGCAAGTAGTTGGTACAACCACTTGCATATTATGAAGTTTGCTTATAACAACAATTATCGAGCAATTATTGGCATGGCACTACTGGGCTAAAGTAGGGGAGCATAAGTTCTCGGGACTTAGGTTGGTCCAAGTTTCTATTGAATTAATCTAGAAGATTAGAACGAGGATGAAGACGGCTCAGAGCAGGCAAAAAAAAAAAGTTATGCAGACACCAGATGTAGAGACTTAGAGGTTGCAGTTGGAGACTTTGTGTTTCTGAAAGTTGCACCTATGAAGGAAGTTTTGAGGTTTGGAAGGAAAGGGAAGTTAAGTCCCAGGTTTATAGGTCCATTTGAGATTTTGGAGAGTTGGTCCAGTGGCTTATCGTTTGGCCTTACCACCATCCCTCTCTCCAGTTCATAACGTGTTCCATGTATCTATGCTGCGAAGATACATGGCAGACCCGTCTCATGTGATTGATTTTGAGCCTTTGAGACTGGATGAAGACTTGAGTTATGAAGGGAAACCAGTTCAAATCCTTGCTAGAGATCGTAAGACCCTTCGTAATAAGGAGACAACACTAGTCAAAGTGCTTTGGCAAAACCACCTTATTCAGGAAGCAACGTGGGAAAGAGAAGGTGAGATGAGATCGAAGTATCCCGAGCTCTTTCGAGATTAGCAACTTTCGAGGACGAAAGTTTTTAAGGAGGGAAGATTGTAACGTCGGCAAATCTGTAAAGCTTGATTTTTCCTAATTTTGTGTTTAATTAGGTTTAAATTAAGAGTTTAAGTGAAGGTATGCTACAAATTGATGGGTTTTTGTTAATTGGTATAGTTGAGGGGCATTTTCGTAGTTTCCTCAAAGTTGAAGTTAGCCCTAGTCCCTCCTTAACTTTGAGCCAAGCCGCCATCCCCCTTTTTCAGCAGCCTTCATTTTCTTCTTCGGGAGCCTCCCTCTACAGCAAACCGTCCCCTTCTTCGATTCGGCCAACCTTCATCCCACATCTCCCTCGTTTCTTGCGTTTTCCGACCAGTCTCCAAACTCCAGTAGGTCGCGTCTCCGTTCGTCTTCCCTTCTCCGGCGGCGTGGGCAGCAGACGCAGCGGAAGTTCGTTTCTTCGGCCAGCAGCAGGTGAGTTTTTCCGCTTTCGTTTCTCTTTGGGCGTTTATCTCGCGAATATCTCTTCCCTCACGCCCGACCTCTCTCTCCCGGAATCTCTCTTATCTGTGTTGCGTGTTGTAGCAGCCTAGGTGTGGTCGGATTGCATCGTCTCTCCTGCAGCAGTGTCGTTAGGCGCAACCAGCATTGTTCGAGAGCATGTCTCTTCGTTTTCGGCGATTCTCATAGTGGGTCTTCAAGTTTCAGTGTCGTGGAGCTTTACCGGCAGTGGGTAAGCGTTATAAGCTTGAGTTTTGTTGGTTTTATGGTGCTAGAGGCTTACCCATTCATTGTGGAAATTGTTTCCAAGGTTTTCGTGGCATTCAAGATCGTATTTGTCGTTTTGGAGCATAATTTGGAGGACTTGGACAACAAGCTTAGTTTCTGTTTAGTTGGTTAAAGGCTTGGAGGCTAAGGGAGTTGTCGATGGGTCGAGCAGCTAATCAACTAAGGTAAGTAGCTATTGGATCTTACTTTTAAGCTTAGTCCCCATTGTATGTATTTAGTTGTGAGCCTTGAACTTGCTTTTGGATTTCAATTTGTATGATAGTTTATTGCATTGTGAAACATGTTGTGGCGTAAAAGTTGAGTATTTCATTGGCATATCTGGCACTGTTCTGGGTGGATTAGTACCTTTTAGTTGTTTGAAAGCATGCTTGATTGTATGGTTTGGTTGCTCTGCATATCCGGATGGTTATGGATGCGAGGCCTGTCTCGCTCTGGTTGTGATATTTCGAAGTGCTTTGTAGCTTGTGGTTGGGCAGTGTAGAATATAGGAGTGTTTATCTGCTTTTCAGATGAGTAGGAAAATTTTGGTTTCCTTTTACGTATGTCGTTATACTGCCGAATTTTCGGTAGAATAGTGATGTTCCTAAAACTAAGTTTAAATACCTACCTTTGGGTATGAGTGCACTAGAGGACCACATGGTTGTTTAGGGCTGATCCTAGTGTAGGGACCTTAGACTCGATTAGGGCCTCAGATGGACTTAAAAGATCCTTAAGTCTTATGTTAACTAGAGTGTTTTCCTTCCCCATCTTAGGGCTGATAGAACCCAATTTTCAGGCACGTTATCGTGCGCTCTCTCAGTTCAAGACGGTGTTGAGCCCATGTTCAGGCACATTTTCGTGCACCAGTTGCTCCATCGAGTTTTCGATGTTGAGCTCATATTCAGGCACGTTTTCGTACACCAGTCGCTCCATCAAGTTTTCGATGTTGAGCTTATACTCAGACATGTTTTCATGCACCAGATTTCTCCGCCGTATTTTTCATGATTCAGGGGTGTTGTGTTAGGATAGGTATAGTTCTGCTAGAGGTTGCCAACTAGTCTCTAGTATACTTGCCTTACCCGACTGACCCACACAACACTCTAGTTGGCACAGGTTGGGGATAGGTAATCACCCTAGACAGAACATTTCATGAACCCAGTTATGGCCCTAGGGTTAGAAACCCAAATGACTGTTCCAGTTAGGTCCCTATGATGTTAAAACCCAAACTCAAGTTTTATGCTAATAGATTTCATGTTATCAGATCTCATGCTTTCAGTTTCAGCCTTTAAGTGGGCTACTTACTGAGTATATTCTTATATACTCACCCATGCTACATGACTTTCCTTTTCAGGTGGTACTTGACGACATCAGGCGAGTGGCGAGAGCAGTGGCTTGGCTAGACTATGGGATGCAGCTGCAAACCATGTCTTTAGAAGTCTAG

mRNA sequence

ATGGAGCAGACTCACGAAGGCCCACGGTTAAGACCTCGGAGCAGACCCACGGTGAAGACCCACCTTGCGCGCGAAGACCCACAAGTCTTCCTCTTAACTTCGATTCTCTCCTCGCACGAAGACCGACGCCTTCTTCACTGGTTTTTTTTTAAAAAAAGGAGGTGGGGTTTCCCCCTTCGAATCCAGCTGAAACGAGCCCAGATCTGGGCTCGTTCCAGATCTGGAACAGCTGGATTCGAAGGGGGATTCACCGTTTTGTCGCAATATGCGAGGGCGAGGTTGACGAGACCAGCGAGCGAGTTCAGAGGGGAGAAAGGGGCGGAGCTGCTCAACTATTTTTTTTGTTCGAACGGGTCGCAGACGGGGACGACAAGGGAGAAGAACAAACACCTCCCTCTACAGCAAACCGTCCCCTTCTTCGATTCGGCCAACCTTCATCCCACATCTCCCTCGTTTCTTGCGTTTTCCGACCAGTCTCCAAACTCCAGTAGGTCGCGTCTCCGTTCGTCTTCCCTTCTCCGGCGGCGTGGGCAGCAGACGCAGCGGAAGTTCGTTTCTTCGGCCAGCAGCAGCAGCCTAGGTGTGGTCGGATTGCATCGTCTCTCCTGCAGCAGTGTCGTTAGGCGCAACCAGCATTGTTCGAGAGCATGTCTCTTCGTTTTCGGCGATTCTCATAGTGGGTCTTCAAGTTTCAGTGTCGTGGAGCTTTACCGGCAGTGGGTAAGCGTTATAAGCTTGAGTTTTGTTGGTTTTATGGTGCTAGAGGCTTACCCATTCATTGTGGAAATTGTTTCCAAGGTTTTCGTGGCATTCAAGATCGTATTTGTCGTTTTGGAGCATAATTTGGAGGACTTGGACAACAAGCTTAGTTTCTGTTTAGTTGTTGAGTATTTCATTGGCATATCTGGCACTGTTCTGGGTGGATTAGTACCTTTTAGTTGTTTGAAAGCATGCTTGATTGTATGGTTTGGTTGCTCTGCATATCCGGATGGTTATGGATGCGAGGCCTGTCTCGCTCTGGTTGTGATATTTCGAAGCACGTTATCGTGCGCTCTCTCAGTTCAAGACGGTGTTGAGCCCATGTTCAGGCACATTTTCGTGCACCAGTTGCTCCATCGAGTTTTCGATGTTGAGCTCATATTCAGGCACGTTTTCGTACACCAGTCGCTCCATCAAGTGGTACTTGACGACATCAGGCGAGTGGCGAGAGCAGTGGCTTGGCTAGACTATGGGATGCAGCTGCAAACCATGTCTTTAGAAGTCTAG

Coding sequence (CDS)

ATGGAGCAGACTCACGAAGGCCCACGGTTAAGACCTCGGAGCAGACCCACGGTGAAGACCCACCTTGCGCGCGAAGACCCACAAGTCTTCCTCTTAACTTCGATTCTCTCCTCGCACGAAGACCGACGCCTTCTTCACTGGTTTTTTTTTAAAAAAAGGAGGTGGGGTTTCCCCCTTCGAATCCAGCTGAAACGAGCCCAGATCTGGGCTCGTTCCAGATCTGGAACAGCTGGATTCGAAGGGGGATTCACCGTTTTGTCGCAATATGCGAGGGCGAGGTTGACGAGACCAGCGAGCGAGTTCAGAGGGGAGAAAGGGGCGGAGCTGCTCAACTATTTTTTTTGTTCGAACGGGTCGCAGACGGGGACGACAAGGGAGAAGAACAAACACCTCCCTCTACAGCAAACCGTCCCCTTCTTCGATTCGGCCAACCTTCATCCCACATCTCCCTCGTTTCTTGCGTTTTCCGACCAGTCTCCAAACTCCAGTAGGTCGCGTCTCCGTTCGTCTTCCCTTCTCCGGCGGCGTGGGCAGCAGACGCAGCGGAAGTTCGTTTCTTCGGCCAGCAGCAGCAGCCTAGGTGTGGTCGGATTGCATCGTCTCTCCTGCAGCAGTGTCGTTAGGCGCAACCAGCATTGTTCGAGAGCATGTCTCTTCGTTTTCGGCGATTCTCATAGTGGGTCTTCAAGTTTCAGTGTCGTGGAGCTTTACCGGCAGTGGGTAAGCGTTATAAGCTTGAGTTTTGTTGGTTTTATGGTGCTAGAGGCTTACCCATTCATTGTGGAAATTGTTTCCAAGGTTTTCGTGGCATTCAAGATCGTATTTGTCGTTTTGGAGCATAATTTGGAGGACTTGGACAACAAGCTTAGTTTCTGTTTAGTTGTTGAGTATTTCATTGGCATATCTGGCACTGTTCTGGGTGGATTAGTACCTTTTAGTTGTTTGAAAGCATGCTTGATTGTATGGTTTGGTTGCTCTGCATATCCGGATGGTTATGGATGCGAGGCCTGTCTCGCTCTGGTTGTGATATTTCGAAGCACGTTATCGTGCGCTCTCTCAGTTCAAGACGGTGTTGAGCCCATGTTCAGGCACATTTTCGTGCACCAGTTGCTCCATCGAGTTTTCGATGTTGAGCTCATATTCAGGCACGTTTTCGTACACCAGTCGCTCCATCAAGTGGTACTTGACGACATCAGGCGAGTGGCGAGAGCAGTGGCTTGGCTAGACTATGGGATGCAGCTGCAAACCATGTCTTTAGAAGTCTAG

Protein sequence

MEQTHEGPRLRPRSRPTVKTHLAREDPQVFLLTSILSSHEDRRLLHWFFFKKRRWGFPLRIQLKRAQIWARSRSGTAGFEGGFTVLSQYARARLTRPASEFRGEKGAELLNYFFCSNGSQTGTTREKNKHLPLQQTVPFFDSANLHPTSPSFLAFSDQSPNSSRSRLRSSSLLRRRGQQTQRKFVSSASSSSLGVVGLHRLSCSSVVRRNQHCSRACLFVFGDSHSGSSSFSVVELYRQWVSVISLSFVGFMVLEAYPFIVEIVSKVFVAFKIVFVVLEHNLEDLDNKLSFCLVVEYFIGISGTVLGGLVPFSCLKACLIVWFGCSAYPDGYGCEACLALVVIFRSTLSCALSVQDGVEPMFRHIFVHQLLHRVFDVELIFRHVFVHQSLHQVVLDDIRRVARAVAWLDYGMQLQTMSLEV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..186

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030824.1Spg030824.1mRNA