Spg030819 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030819
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotransposon protein
Location	scaffold11: 30331732 .. 30338752 (-)
RNA-Seq Expression	Spg030819
Synteny	Spg030819

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCTTCAACTTGCCGTGGGTGTCGATGATAGGAATCGGTATCCGCCTGGTAAATTGGGGCACGGTGAGGGGTGGGACCAAGGTAAGGGGTAACCGACCGATGATGTCTTGGAGCAAGCAACCTGAAAAATCTTTATTTATTTTTTTTGATCTGCCTTCTTGTTCTAGTTTTTTCCTCTTCTGATTTACCGTTTGTTAATACGTTTTGTTTGTACGTTTTTTTTCCCTCTTCTTGTCGACTCCGATTGTTCTTCTTGTCTTCCTACTGTTTTTCATGTGACTTTTTTTCCCTATCTTCTCATGCTCTGCAATGATGTCGTTTCCTATGGTTAATTTCATTTGTTTTCCGCACAAACACATTGATAACTTGTTTTGAATTCATGTTTTCTCTCATGACCCCCCCTTCATATTATGTGTTCATGCTTAGGGTTGTGTAAATTTGCTTCCTCTCATGACCCCCCCCCCCCCCAATTCGTATTATGTCTTCATACTCACTGGTCTGTGAATTTGCTTTCTCTCATGACCCCCCCCCCCTCGTATTAATGTGTTCATGCTCATTGGTCAGTACATTTGTTTTTCTATTCCCCTTTCAGCTGTTCATGCTCACTGTTATGTGTTGCATTCTTGTTTTTTCCTTCTCATTTTTTTCCCCTGATCTATTTCCTTCTTATTTCTCCTGTTCTGCCCACATAATTTGATTTAAATTTGTTTGCTCGCCACATTATTTGATTTGAATTTGTCTTCTTTTGTCCACAATGTTTGAATTAACTTTGTGTTCTTCATTTACATGAAGTGTTCACTAGATTGTGTTTTTTCCACTTGTTTCTTATTTCATACTTTTGTTTGTCCGTTTCTTTTTGGCCATATTTGTTTGACTTCCATTGTCTTTTTTTTTCCTTCATGTGAAGTTCATTATGTTTTCCAAATTTGAAAATGTTTTCTGCATTGAACAAAACCATGGTTGAAAAAAAATTCCACCTGAGGCCGGTTACAATTTTTTTCCGTATTAATCTATTTTTTTGTTCTTATGTTTTGGCATTTGGTTACTTTCTGACTAATCACATTGTGGTTGAACCAATTTTGTGTAAATAAAGTTTATTTGTGATGGAAGAAGTCTGATATTGCATTTATTTTACCATACTCACCATATCTTTCTTTTTAAATATTGTAGTTGGTTGCATTTATGTTGACTTCATAAATGCAACCAACCTTCTGACCTAATAAATAAGGCAGCCAGCAACCATCATGTACATTTATATTTTGTGGTTTAATTTTGCAACCACCACTTGTACTTTCATTCAACCACCTCCTTCAATCCCTTCCTTATTTAAATAAGACCATCATTTCTTATTTTCTTTGAGGAAAGTCTCCACTGCATTAGATAGTCCCTCTAAACGGTGAGTCATTTTCCAACTTCCATACTTTTATTTCTTTCTATTGCTATGTATAGTACGTTCTTCGTTACACTAACTACACTCTCTTCTTATCTTCTGCCCCTGAAGACAAACCTGAACCCGACTCCACCTTCTTGTGTTTCGTTTCACGCATCTCAATCTCATATAACGGTAAGTTTTCGTTCTCTGCCTTCGTTCACTTCGTTTGTACTTGGTCTACATTCATATGGTCATATCTTAATAACTTTCTCCCTTTATGTCATATGCTTGCAGGTTTACTCCAAAAACACCGTTATATTCGAGGTTCGTTCGTTCAATTTAAATACCCTTATACTGTTCAGTAAATTCTGTATATTATTTGTTATGGACATTACAAACTGCTTGATTTGTATTACTGAATTTCGGACATTTCGTTGGTTTCTTTTGTTTTTTGTACGTTGTAATGTTCATTACGTTAGTATTCTTGCTTATGTAATGATATCATTTTCTGTATGAATGGTTTTTTTCTTATCAAATGTTGATGAATATTTTAAATAAATGGTAGTAAAAAACATGTCACGTTGTTTGAATGAATATTGAGTTGCTAAAATTCTTCATGGTTTTACTATCATTTTTTATTTTCAGTGTTGACAAAAAGATGCCGTAGCAATTTTGTAATGACATGTTCACTAAAATGTTGAACAAAGAAAGAAAATTGGAATTTCAAGTTTACTATAACACAAGTTAAATTTATTAGCAATTATGGAAAATGATTTTGATAATATGTACATTTGCTTTAAAGAAGTTAAAATTTGTTTGATTCCCTTTTGCTTGCTTCTGGAATTTTAGTTTAAAAAAAAATTGTGACCTCACTATAATATGAAAAATGTTCGGTTTTTTTTTATCTTCAACACTTTGCTGAAAAATTAATTTTAAATGGATAAATTATACTAAAAGAAATTTAATTTGTACTAACAAGGGAGAAAGGAAAATTTAATTTAATTTTCAGTTTTCATTCAAGTTTTTCAACACACTGATTAATAGCATATTTGTACTAACAAGGGAGAAAGGGAAGAAATTAAAAAGTAACCACATTCATGTAACTCTAGTAAAATGAATAAAAGTGATTTGGGAAAAAAAAAAAATAAACAACATACATCATGTTAAAGTAATCTGTTTTTTTTTTTTAACAAAATTGAAGTCATGAAAATAACACTTTTATATGGTTTCAAAAAAAGCCACTTTTTATCAATTTAAACATCAATGAACTTTAGTAAATTTTTTTCTTTCAATTAGAGTTATTATGTTCAAAATTGTAGGAAAATAAATTTTCTATCTTCAATTAGAGTTAAGAAGTTCAACATACAAATGAAATAAATTTTGTATTTTTCATTAGAGTTAATAGTTGCAAAATTCAAGTAAAACAGATTTCCTAGTTTCAATTAAGGTTAAGAAGTTCAAATTTGAAGTAAAATAAATTCCCTAATTCCAACTTGAGGTAAAGACGTTTAAAATTGAAGTAATCAAAATATTGATATTGTTTTGTCATTGAAGAGCATTTCATATCCTTAATTTATATGAGTTTAATTGAAGTAAGTCTTATTCATATTATTATCTTTATTCAAGGGTTTTGCATATTATTTTATTTTCATTTTTCATGAGTTTAATTGCACAAAGAATTTCAAAAAACAAGTATTGAAAATGTTCCTATTATATATATGCTCAATTTATATCTTATCCCATCATTTGATTTTCATTAAGCTTACTTTAATTTAATTGCACTTTTATATTTGTCTATATTATGTGAGGTTAATAATCTATCTTAGTTTAGTTTAGGGGTTATTGTGCATTTCGAACGTATACTTCTAAACCCCAAAAGATAGATTCAATGATTTGGTAAAATAATACACAATTGTTTTGTGACCAAAGAACAAATTATATAAATTACCTTTTCGCCCTAAACCCCAAATCCTAAACCCTAAACTTACCAAACCCTAAACCACTTAACCACTAAATCCTAAACCACTAAACCGTAAACCATTTAACCACTAAACCCTAAACCACTAAACCACTAAACCCTAAACCCTAAACCACTCAACCTTAAACCACTTAACCACTAAGCCCTAAACCACTAAACCACTAAACCCTAAACCACTTAACCGCTAAACACTAAACCACTAAACCCTAAACCACTTAACCACTAAACCTTAGACCATTTAACCACTAAACCCGGATTCCACTAAACCACTTAACCACTAAACCGTAAACCCTAAACCACAAAACCTTAAACCATTTAACCACTAAACCACTCAACCACTAAACCCTAAATCACTAAACCCTAAACCCTAAACCCTAAACCACTTAACCGCTAAACACTAAACCACTAAACCCTAAACGAAAACCTTAAACCATTTAACCACTAAACCCAGATTGTTGTAATCATAAAACGAAACAACACGCTTTAAATATAGAAGATAGGTGACTGCTTGACTTGTTACATTTTGAATAATAGGACTATGGGGACTTCGAAATTATATGTCGTGTTTGTTGGTCGCAACCCAGGAATTTACACCTCGTGGGTTGAATGCTACAAACAAGTTAACCAGTTTAAGGGCGCACTACACAAGTCCTATCCAACATTTCAAGAAGCAGAGTATGCATTTAGGCATTACGTTATGGGCACCTGTGGCGAACCAAACCTCGTTGACCAACATGAAGCGTGTCGTAACCTTCCTGTAGGGAGATATGGTCGCGTAGGAAATTGTTATAGTATTAGTCGGATGTTTGTAGGGTTCCTGTTCGGAATAATTGTAACTTACGTCATCGTTCATTATCTTTAGAATGCTAGTGTATCCCCATGTACGATGAGTAAGGCTATGAACTAAATATAAGATGGTTTATGTTTTGTCCAGGCTGAAGTAGTACCGTTCCTAATGGATTCCATAACCCCACATGAACTTGTGTCCGTACTTTCAATAATGGCTGACTCTCAGCGCCAACTATTCAACCTGATTAACTCCTTCATGAACAACCACCGTAGGATAGAAAACCAAACTCCCTACCTCAGACACCAGATGAGGCAGTTAGCCTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGGAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACTTTCGGGTTGGTAGGAATGGAAATCATAGACGTCGAAGAGATGGTCGCGATGTTCTTGCACATCGTTGCTCACGATGTTAAGAATCGAGTCATTAGAAGACAGTTTGCACGGTCGGGTGAAACCATTTCTCGGCACTTCAACGCGACTTTGAGTGTAGTAATACGATTGTACGACGTCCTACTTAAGAAACCGAAACCGATCACGGCTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGGTATGGACACTATACGTTTGTACACATCGTGAAGATTTTACAACGTCCTTCTGACATTTGTAATGCGATGTGGAAACAGAATTGTTTAGGTGCATTGGACGGTATGTACGTAAAGGTTCATGTTAGTGCGGCTGATCGACCAAGGTATAGGACGCAAAAGGGTGAGATTGCAACAAATGTATTGGGCGTTGTGTCGCCAAAAGGTGAATTCATTTTTGTTATGCTAGGATGGGAAGGTTTGGCTGCTGATTCTCGTGTACTCAGAGATGCTATATCACGCCCTGATGGACTAATAGTGCCGAAGGGTATGGAACCCAGTATCAATGTAAAATAGGATCGCTTACGTCATCCTTAGGTATTAACCATCTTTTCTGAACAGGTTACTACTACCTCTGTGATGCTGGGTACCCAAACGCAAAAGGTTTCTTGGCACCTTACAGAGGAGAGCGGTACCACTTAACCAAGTGGCGTGGGGGAGGCAATCCACCTACTACACCAAGAGAGTTCTTCAACATGAAGCATTCTTCTGCACGTAATGTTATTGAGAGAGCATTCGGTGCTCTGAAAGGACGGTGGGCGATACTTCGGGGGAAGTCATACTACCCTGCTCGGACCTAGTGTCGAATCATAACAGCGTGTTGTTTACCCCACAACCTTATCACCCGGGAGATGGGTCTTGATGTTGGATTGGATGAAGGTGATGTTGGTCGATCTGAACTCGTACCTCTCGATGGCGAGAACATTACCTTCATTCAAAGCTCCACTGAATGGACGCAAAAGCGAGATGACCTAGCGAACAGGATGTTCAACGTGTGGGGGCAACAACATCTGTGATCCAGTTTGGACATACGACTATCTGCTATGTTGTAATTTTGATAGTTCTGGCATTTCTTCGGCCGTACATTTTTTCTACAATCTAAACGATCTATTCCATGTAACTCAGTTAGATTTATGGAAAACCATCGTTAATGTTGTTATTCTACATTATGTTTCTAACTTTCTGTCTGCGATTACTTCATAAATAACTCTTCTACATTATGTCGTCGATAGTGTGAATTGATCAGAATACATACTAACGAAATCTAATGACACAATACTCTATCCATGTAGACTAATGGCAGGTGCAGATAAACACCCTAAACACATCTGGACGAGGCAAGAGGAGGCAAGATTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTTAGGCCCGGATACCTCGCCCGACTGAAGCGGATGATAAAAGAGAAAATGTCGTCCTGCACCATAGATTCAACGTCCATAATAGACTGCAAGGTGCGGTCCTTGAAACGGCAATACAGTACCATCTCGGAGATATTGGGTCTGGGCTGTAGTGGATTCGGTTGGAATGACGAGTTTAAATGCATCCAGGCTGAGAAGGAGGTCTACGATGCATGGGTGAAGGTACGGTCTGTAGTCATTCATTGATGTAACCCATGTACACTATCGTTGCTAAAACACTCTTCAATACATGCAGTCACACTCCAGCGCAAAAGGACTGCTGAACAAGCCTTTTCATCAATATGAGGATCTTGCTTTCGTGTTCGGCAAAGACAAGGCGAGTGGCGGCGCGTGCAATGTTCCAGCGGAACAGGCCGACAGCACCCACGGGGACGATGAGGGTGATCAGAATGTCCAAGCTGACCAGGATTGTTATGTCCCCGCTCCTCCCGACATTAATCTGGCCGCAGACATGGAGTTCGATGACGTCCCAATCACACCGACAAGTCGACCAAGCACTGTAGGGTCCTCCCAGAGTCGGAAGCGGAGCAGAGCATCATATGAAGTGGAAGCCCTTGATATTATGAGGCAGTCAGTGGCTATGCAGGAGACACAGTTCACTAAGATCGCTGACTGGCCGGACGCCCAAGACGCACGAGAGTTCAAGAGGCGGGACACGATCGGAGAGATGCTCCTGGCGCAGCAGGAGCTATCGAACGATGAGAGAGTTGCTCTTATGCACATCCTCTTCTCCGACCCGAAGATGACAAATATGATGCTGTCCGTGCCACCGACCCTCAGACTTCGCTTTCTACGAGGACTACTCAACGAACGTCGGTGACTTCCAACAAGACTTTCCTCTGACATACTTTTGATTTGTAATTACGATAATATGTACCTTTGACTGACATTTCATAATTTTTTGTTAACTATAATATAGTCAACCC

mRNA sequence

ATGCCGCTTCAACTTGCCGTGGGTGTCGATGATAGGAATCGGTATCCGCCTGGTAAATTGGGGCACGGTGAGGGGTGGGACCAAGGTAAGGGTACGTTCTTCGTTACACTAACTACACTCTCTTCTTATCTTCTGCCCCTGAAGACAAACCTGAACCCGACTCCACCTTCTTGTGTTTCGTTTCACGCATCTCAATCTCATATAACGGTTTACTCCAAAAACACCGTTATATTCGAGGCTGAAGTAGTACCGTTCCTAATGGATTCCATAACCCCACATGAACTTGTGTCCGTACTTTCAATAATGGCTGACTCTCAGCGCCAACTATTCAACCTGATTAACTCCTTCATGAACAACCACCGTAGGATAGAAAACCAAACTCCCTACCTCAGACACCAGATGAGGCAGTTAGCCTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGGAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACTTTCGGGTTGGTAGGAATGGAAATCATAGACGTCGAAGAGATGGTCGCGATGTTCTTGCACATCGTTGCTCACGATGTTAAGAATCGAGTCATTAGAAGACAGTTTGCACGGTCGGGTGAAACCATTTCTCGGCACTTCAACGCGACTTTGAGTGTAGTAATACGATTGTACGACGTCCTACTTAAGAAACCGAAACCGATCACGGCTTCTTGCCAAGATGGGAGACTAATGGCAGGTGCAGATAAACACCCTAAACACATCTGGACGAGGCAAGAGGAGGCAAGATTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTTAGGCCCGGATACCTCGCCCGACTGAAGCGGATGATAAAAGAGAAAATGTCGTCCTGCACCATAGATTCAACGTCCATAATAGACTGCAAGGTGCGGTCCTTGAAACGGCAATACAGTACCATCTCGGAGATATTGGGTCTGGGCTGTAGTGGATTCGGTTGGAATGACGAGTTTAAATGCATCCAGGCTGAGAAGGAGGTCTACGATGCATGGGTGAAGTCACACTCCAGCGCAAAAGGACTGCTGAACAAGCCTTTTCATCAATATGAGGATCTTGCTTTCGTGTTCGGCAAAGACAAGGCGAGTGGCGGCGCGTGCAATGTTCCAGCGGAACAGGCCGACAGCACCCACGGGGACGATGAGGGTGATCAGAATGTCCAAGCTGACCAGGATTGTTATGTCCCCGCTCCTCCCGACATTAATCTGGCCGCAGACATGGAGTTCGATGACGTCCCAATCACACCGACAAGTCGACCAAGCACTGTAGGGTCCTCCCAGAGTCGGAAGCGGAGCAGAGCATCATATGAAGTGGAAGCCCTTGATATTATGAGGCAGTCAGTGGCTATGCAGGAGACACAGTTCACTAAGATCGCTGACTGGCCGGACGCCCAAGACGCACGAGAGTTCAAGAGGCGGGACACGATCGGAGAGATGCTCCTGGCGCAGCAGGAGCTATCGAACGATGAGAGAGTTGCTCTTATGCACATCCTCTTCTCCGACCCGAAGATGACAAATATGATGCTGTCCGTGCCACCGACCCTCAGACTTCGCTTTCTACGAGGACTACTCAACGAACGTCGGTGA

Coding sequence (CDS)

ATGCCGCTTCAACTTGCCGTGGGTGTCGATGATAGGAATCGGTATCCGCCTGGTAAATTGGGGCACGGTGAGGGGTGGGACCAAGGTAAGGGTACGTTCTTCGTTACACTAACTACACTCTCTTCTTATCTTCTGCCCCTGAAGACAAACCTGAACCCGACTCCACCTTCTTGTGTTTCGTTTCACGCATCTCAATCTCATATAACGGTTTACTCCAAAAACACCGTTATATTCGAGGCTGAAGTAGTACCGTTCCTAATGGATTCCATAACCCCACATGAACTTGTGTCCGTACTTTCAATAATGGCTGACTCTCAGCGCCAACTATTCAACCTGATTAACTCCTTCATGAACAACCACCGTAGGATAGAAAACCAAACTCCCTACCTCAGACACCAGATGAGGCAGTTAGCCTGCTTCCGGTTGATTCATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGGAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACTTTCGGGTTGGTAGGAATGGAAATCATAGACGTCGAAGAGATGGTCGCGATGTTCTTGCACATCGTTGCTCACGATGTTAAGAATCGAGTCATTAGAAGACAGTTTGCACGGTCGGGTGAAACCATTTCTCGGCACTTCAACGCGACTTTGAGTGTAGTAATACGATTGTACGACGTCCTACTTAAGAAACCGAAACCGATCACGGCTTCTTGCCAAGATGGGAGACTAATGGCAGGTGCAGATAAACACCCTAAACACATCTGGACGAGGCAAGAGGAGGCAAGATTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTTAGGCCCGGATACCTCGCCCGACTGAAGCGGATGATAAAAGAGAAAATGTCGTCCTGCACCATAGATTCAACGTCCATAATAGACTGCAAGGTGCGGTCCTTGAAACGGCAATACAGTACCATCTCGGAGATATTGGGTCTGGGCTGTAGTGGATTCGGTTGGAATGACGAGTTTAAATGCATCCAGGCTGAGAAGGAGGTCTACGATGCATGGGTGAAGTCACACTCCAGCGCAAAAGGACTGCTGAACAAGCCTTTTCATCAATATGAGGATCTTGCTTTCGTGTTCGGCAAAGACAAGGCGAGTGGCGGCGCGTGCAATGTTCCAGCGGAACAGGCCGACAGCACCCACGGGGACGATGAGGGTGATCAGAATGTCCAAGCTGACCAGGATTGTTATGTCCCCGCTCCTCCCGACATTAATCTGGCCGCAGACATGGAGTTCGATGACGTCCCAATCACACCGACAAGTCGACCAAGCACTGTAGGGTCCTCCCAGAGTCGGAAGCGGAGCAGAGCATCATATGAAGTGGAAGCCCTTGATATTATGAGGCAGTCAGTGGCTATGCAGGAGACACAGTTCACTAAGATCGCTGACTGGCCGGACGCCCAAGACGCACGAGAGTTCAAGAGGCGGGACACGATCGGAGAGATGCTCCTGGCGCAGCAGGAGCTATCGAACGATGAGAGAGTTGCTCTTATGCACATCCTCTTCTCCGACCCGAAGATGACAAATATGATGCTGTCCGTGCCACCGACCCTCAGACTTCGCTTTCTACGAGGACTACTCAACGAACGTCGGTGA

Protein sequence

MPLQLAVGVDDRNRYPPGKLGHGEGWDQGKGTFFVTLTTLSSYLLPLKTNLNPTPPSCVSFHASQSHITVYSKNTVIFEAEVVPFLMDSITPHELVSVLSIMADSQRQLFNLINSFMNNHRRIENQTPYLRHQMRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETISRHFNATLSVVIRLYDVLLKKPKPITASCQDGRLMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRPGYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTISEILGLGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFGKDKASGGACNVPAEQADSTHGDDEGDQNVQADQDCYVPAPPDINLAADMEFDDVPITPTSRPSTVGSSQSRKRSRASYEVEALDIMRQSVAMQETQFTKIADWPDAQDAREFKRRDTIGEMLLAQQELSNDERVALMHILFSDPKMTNMMLSVPPTLRLRFLRGLLNERR

Homology

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BLAST of Spg030819 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 308.1 bits (788), Expect = 1.5e-79
Identity = 220/651 (33.79%), Postives = 288/651 (44.24%), Query Frame = 0


Query: 93  HELVSVLSIMADSQRQLFNLINSFMNNHRRIENQTPYLRHQMRQLACFRLIHESDLCCRE 152
           HEL S+++    SQRQL  ++    N+ +RI +     RH++RQLA FR+IH SDL CR+
Sbjct: 4   HELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQ 63

Query: 153 STRMDRRCFAILCSLLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRVIRRQFARSGET 212
           STRMDRRCFAILC LLRT  GL   E++DVEEMVAMFLHI+AHDVKNRVI+R+F RSGET
Sbjct: 64  STRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGET 123

Query: 213 ISRHFNATLSVVIRLYDVLLKKPKPITASCQDGR-------------------------- 272
           ISRHFN  L  VIRL+D LLKKP+P+   C D R                          
Sbjct: 124 ISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRA 183

Query: 273 ------------------------------------------------------------ 332
                                                                       
Sbjct: 184 RYRTRKGEVATNVLGVYDTKGDFVYVLTGWEGSAADSRILRDALSRPNRLKVPKGYYYLV 243

Query: 333 ------------------------------------------------------------ 392
                                                                       
Sbjct: 244 DAGYPNAEGFLAPYRGQRYHLQEWRGPKNAPSTSKEFFNMKHSSARNVIERAFGVLKGRW 303

Query: 393 ------------------------------------------LMAGADKHPKHIWTRQEE 452
                                                      M  + + PKH WT++EE
Sbjct: 304 AILRGKSYHPVEVQCHTILACCLLHNLINREMTNFDIEDNIVSMTSSSRLPKHTWTKEEE 363

Query: 453 ARLVESLVELVHEGGWRGDNGTFRPGYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQ 512
           A     LVELV+ GGWR DNGTFRPGYL +L RM+  K+  C I + S ID +++ +KR 
Sbjct: 364 A----GLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHA-STIDSRIKLMKRM 423

Query: 513 YSTISEILGLGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFG 555
           +  ++E+ G  CSGFGWNDE KCI AEKEV+D W  SH +AKGLLNK F  Y++L++VFG
Sbjct: 424 FHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFG 483

[Close]

BLAST of Spg030819 vs. NCBI nr
Match: TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 1.1e-71
Identity = 151/329 (45.90%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 167 LLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETISRHFNATLSVVIR 226
           +LRT  GL   + +DVEEMV +FLHIVAHDVKNRV RR FARSGET+SRHFN  L+VV+R
Sbjct: 1   MLRTRGGLEATQYVDVEEMVTIFLHIVAHDVKNRVARRHFARSGETVSRHFNVVLNVVLR 60

Query: 227 LYDVLLKKPKPITASCQDGR-----LMAGADKHPKHIWTRQEEARLVESLVELVHEGGWR 286
           L+++LLK+P  +T SC   +     + +   K  KH WT  E+  LVE L++LV +G WR
Sbjct: 61  LHEILLKQPDSVTHSCSHEKWRWFQMASINSKVTKHWWTTIEDEALVECLLQLVEKGCWR 120

Query: 287 GDNGTFRPGYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTISEILGLGCSGFGW 346
            DNGTF+PGYL ++++++KEK+    I  T  ++  V+ LK+QY+TI+E++G  CSGF W
Sbjct: 121 VDNGTFKPGYLVQVQKLMKEKILESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGFSW 180

Query: 347 NDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFGKDKASGGACNVPAEQAD 406
           N E KCI+AEK V + WVK H +A+ LLNKPF  + DL  VFG+D+A+GG C  P E   
Sbjct: 181 NKERKCIEAEKSVSNDWVKGHLNARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEMGS 240

Query: 407 STHGDDEGDQNVQADQDCYVPAPPDINLAADMEFDDVPITPTSRPSTVGSSQSRKRSRAS 466
            T  D E D  +   +D  +P P  +   +    +D+P TPTS     GSS+  K+ R S
Sbjct: 241 QTARDTEEDDMIINLEDFDIPNPHGLEPPSG---EDMPSTPTSMAHDAGSSRPSKK-RRS 300

Query: 467 YEVEALDIMR--QSVAMQETQFTKIADWP 489
           Y  + +D  R  +S+    T      D+P
Sbjct: 301 YSRDLMDTFRATESLLPDPTMLHAFLDYP 325

[Close]

BLAST of Spg030819 vs. NCBI nr
Match: KAA0033487.1 (uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 279.6 bits (714), Expect = 5.7e-71
Identity = 150/329 (45.59%), Postives = 207/329 (62.92%), Query Frame = 0


Query: 167 LLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETISRHFNATLSVVIR 226
           +LRT  GL   + +DVEEMV +FLHIVAHDVKNRV RR FARSGET+SRHFN  L+VV+R
Sbjct: 1   MLRTRGGLEATQYVDVEEMVTIFLHIVAHDVKNRVARRHFARSGETVSRHFNVVLNVVLR 60

Query: 227 LYDVLLKKPKPITASCQDGR-----LMAGADKHPKHIWTRQEEARLVESLVELVHEGGWR 286
           L+++LLK+P  +T SC   +     + +   K  KH WT  E+  LVE L++LV +G WR
Sbjct: 61  LHEILLKQPDSVTHSCSHEKWRWFQMASINSKVTKHWWTTIEDEALVECLLQLVEKGCWR 120

Query: 287 GDNGTFRPGYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTISEILGLGCSGFGW 346
            DNGTF+PGYL ++++++KEK+    I  T  ++  V+ LK+QY+TI+E++G  CSGF W
Sbjct: 121 VDNGTFKPGYLVQVQKLMKEKILESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGFSW 180

Query: 347 NDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFGKDKASGGACNVPAEQAD 406
           N E KCI+AEK V + WVK H +A+ LLNKPF  + DL  VFG+D+A+GG C  P E   
Sbjct: 181 NKERKCIEAEKSVSNDWVKGHLNARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEMGS 240

Query: 407 STHGDDEGDQNVQADQDCYVPAPPDINLAADMEFDDVPITPTSRPSTVGSSQSRKRSRAS 466
            T  D E D  +   +D  +P P  +   +    +D+P TPTS     GS +  K+ R S
Sbjct: 241 QTARDTEEDDMIINLEDFDIPNPHGLEPPSG---EDMPSTPTSMAHDAGSFRPSKK-RRS 300

Query: 467 YEVEALDIMR--QSVAMQETQFTKIADWP 489
           Y  + +D  R  +S+    T      D+P
Sbjct: 301 YSRDLMDTFRATESLLPDPTMLHAFLDYP 325

[Close]

BLAST of Spg030819 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 269.6 bits (688), Expect = 5.9e-68
Identity = 164/429 (38.23%), Postives = 218/429 (50.82%), Query Frame = 0


Query: 156 MDRRCFAILCSLLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETISR 215
           MDRRCF ILC++LRT  GL   + +DV+EMV +FLHIVAHDVKNRV RR  ARSGET+SR
Sbjct: 1   MDRRCFTILCTMLRTRGGLEATQYVDVKEMVVIFLHIVAHDVKNRVARRHCARSGETVSR 60

Query: 216 HFNATLSVVIRLYDVLLKKPKPITASCQ-DG----------------------------- 275
           HFNA L+ V+RL+++LLK+P P+T SC  DG                             
Sbjct: 61  HFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRNGDITTNVTTT 120

Query: 276 ----------------RLMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRP 335
                            + +   K  KH WT  E+  LVE L++LV EGGWR DNGTF+ 
Sbjct: 121 YVMLVIQMLKDSSLHTEMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKL 180

Query: 336 GYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTISEILGLGCSGFGWNDEFKCIQ 395
           GYL                              +QY+ I+E++G  CSGFGWN+  KCI+
Sbjct: 181 GYL------------------------------KQYTAIAEMMGPACSGFGWNEGQKCIE 240

Query: 396 AEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFGKDKASGGACNVPAEQADSTHGDDEG 455
            EK V+D WVK H +A+GLLNKPF  + DL  VFG+D+A+GG C  P E +  T  D E 
Sbjct: 241 VEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEE 300

Query: 456 DQNVQADQDCYVPAPPDINLAADMEFDDVPITPTSRPSTVGSSQSRKRSRASYEVEALDI 515
           D      +D  +P P  +   +    +D+P TPTS     GSS+  K+ R SY  + +D 
Sbjct: 301 DDMDINLEDFDIPNPHGLEPPSG---EDMPSTPTSMTHDAGSSRPSKK-RRSYSGDLMDT 360

Query: 516 MRQSVAMQETQFTKIADWPDAQDAREFKRRDTIGEMLLAQQELSNDERVALMHILFSDPK 539
            R S+     +  KIA W   +   E      +   L     +  D+ + +   L  DP 
Sbjct: 361 FRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPT 395

[Close]

BLAST of Spg030819 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 256.1 bits (653), Expect = 6.7e-64
Identity = 191/631 (30.27%), Postives = 263/631 (41.68%), Query Frame = 0


Query: 142 LIHESDLCCRESTRMDRRCFAILCSLLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRV 201
           +IHESDL CR+STRMDRR FAILC LLR   GL   EI+DVEEMVAMFLH++AHDVKNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 202 IRRQFARSGETISRHFNATLSVVIRLYDVLLKKPKPITASCQDGR--------------- 261
           I+++F RSGET+SRHFN  L  V+RLY+ L+K+P P+T++C D R               
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 262 ------------------------------------------------------------ 321
                                                                       
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

Query: 322 ------------------------------------------------------------ 381
                                                                       
Sbjct: 181 LQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 240

Query: 382 ------------LMAGADKHPKHI------------------------------------ 441
                       ++ G   +P  +                                    
Sbjct: 241 ERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYA 300

Query: 442 -WTRQEEARLVESL---------------------------VELVHEGGWRGDNGTFRPG 501
             T  E+ + +E+                            +ELV  GGW+ DNGTFRPG
Sbjct: 301 TTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDSCGMELVSMGGWKSDNGTFRPG 360

Query: 502 YLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTISEILGLGCSGFGWNDEFKCIQA 553
           YLA+L RM+ EK+S C + +T++IDC++++LKR +  I+E+LG  CSGFGWNDE KCI A
Sbjct: 361 YLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVA 420

[Close]

BLAST of Spg030819 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.2e-80
Identity = 220/651 (33.79%), Postives = 288/651 (44.24%), Query Frame = 0


Query: 93  HELVSVLSIMADSQRQLFNLINSFMNNHRRIENQTPYLRHQMRQLACFRLIHESDLCCRE 152
           HEL S+++    SQRQL  ++    N+ +RI +     RH++RQLA FR+IH SDL CR+
Sbjct: 4   HELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQ 63

Query: 153 STRMDRRCFAILCSLLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRVIRRQFARSGET 212
           STRMDRRCFAILC LLRT  GL   E++DVEEMVAMFLHI+AHDVKNRVI+R+F RSGET
Sbjct: 64  STRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGET 123

Query: 213 ISRHFNATLSVVIRLYDVLLKKPKPITASCQDGR-------------------------- 272
           ISRHFN  L  VIRL+D LLKKP+P+   C D R                          
Sbjct: 124 ISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRA 183

Query: 273 ------------------------------------------------------------ 332
                                                                       
Sbjct: 184 RYRTRKGEVATNVLGVYDTKGDFVYVLTGWEGSAADSRILRDALSRPNRLKVPKGYYYLV 243

Query: 333 ------------------------------------------------------------ 392
                                                                       
Sbjct: 244 DAGYPNAEGFLAPYRGQRYHLQEWRGPKNAPSTSKEFFNMKHSSARNVIERAFGVLKGRW 303

Query: 393 ------------------------------------------LMAGADKHPKHIWTRQEE 452
                                                      M  + + PKH WT++EE
Sbjct: 304 AILRGKSYHPVEVQCHTILACCLLHNLINREMTNFDIEDNIVSMTSSSRLPKHTWTKEEE 363

Query: 453 ARLVESLVELVHEGGWRGDNGTFRPGYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQ 512
           A     LVELV+ GGWR DNGTFRPGYL +L RM+  K+  C I + S ID +++ +KR 
Sbjct: 364 A----GLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGCNIHA-STIDSRIKLMKRM 423

Query: 513 YSTISEILGLGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFG 555
           +  ++E+ G  CSGFGWNDE KCI AEKEV+D W  SH +AKGLLNK F  Y++L++VFG
Sbjct: 424 FHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFG 483

[Close]

BLAST of Spg030819 vs. ExPASy TrEMBL
Match: A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.5e-72
Identity = 151/329 (45.90%), Postives = 208/329 (63.22%), Query Frame = 0


Query: 167 LLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETISRHFNATLSVVIR 226
           +LRT  GL   + +DVEEMV +FLHIVAHDVKNRV RR FARSGET+SRHFN  L+VV+R
Sbjct: 1   MLRTRGGLEATQYVDVEEMVTIFLHIVAHDVKNRVARRHFARSGETVSRHFNVVLNVVLR 60

Query: 227 LYDVLLKKPKPITASCQDGR-----LMAGADKHPKHIWTRQEEARLVESLVELVHEGGWR 286
           L+++LLK+P  +T SC   +     + +   K  KH WT  E+  LVE L++LV +G WR
Sbjct: 61  LHEILLKQPDSVTHSCSHEKWRWFQMASINSKVTKHWWTTIEDEALVECLLQLVEKGCWR 120

Query: 287 GDNGTFRPGYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTISEILGLGCSGFGW 346
            DNGTF+PGYL ++++++KEK+    I  T  ++  V+ LK+QY+TI+E++G  CSGF W
Sbjct: 121 VDNGTFKPGYLVQVQKLMKEKILESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGFSW 180

Query: 347 NDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFGKDKASGGACNVPAEQAD 406
           N E KCI+AEK V + WVK H +A+ LLNKPF  + DL  VFG+D+A+GG C  P E   
Sbjct: 181 NKERKCIEAEKSVSNDWVKGHLNARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEMGS 240

Query: 407 STHGDDEGDQNVQADQDCYVPAPPDINLAADMEFDDVPITPTSRPSTVGSSQSRKRSRAS 466
            T  D E D  +   +D  +P P  +   +    +D+P TPTS     GSS+  K+ R S
Sbjct: 241 QTARDTEEDDMIINLEDFDIPNPHGLEPPSG---EDMPSTPTSMAHDAGSSRPSKK-RRS 300

Query: 467 YEVEALDIMR--QSVAMQETQFTKIADWP 489
           Y  + +D  R  +S+    T      D+P
Sbjct: 301 YSRDLMDTFRATESLLPDPTMLHAFLDYP 325

[Close]

BLAST of Spg030819 vs. ExPASy TrEMBL
Match: A0A5A7SW62 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00210 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.8e-71
Identity = 150/329 (45.59%), Postives = 207/329 (62.92%), Query Frame = 0


Query: 167 LLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETISRHFNATLSVVIR 226
           +LRT  GL   + +DVEEMV +FLHIVAHDVKNRV RR FARSGET+SRHFN  L+VV+R
Sbjct: 1   MLRTRGGLEATQYVDVEEMVTIFLHIVAHDVKNRVARRHFARSGETVSRHFNVVLNVVLR 60

Query: 227 LYDVLLKKPKPITASCQDGR-----LMAGADKHPKHIWTRQEEARLVESLVELVHEGGWR 286
           L+++LLK+P  +T SC   +     + +   K  KH WT  E+  LVE L++LV +G WR
Sbjct: 61  LHEILLKQPDSVTHSCSHEKWRWFQMASINSKVTKHWWTTIEDEALVECLLQLVEKGCWR 120

Query: 287 GDNGTFRPGYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTISEILGLGCSGFGW 346
            DNGTF+PGYL ++++++KEK+    I  T  ++  V+ LK+QY+TI+E++G  CSGF W
Sbjct: 121 VDNGTFKPGYLVQVQKLMKEKILESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGFSW 180

Query: 347 NDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFGKDKASGGACNVPAEQAD 406
           N E KCI+AEK V + WVK H +A+ LLNKPF  + DL  VFG+D+A+GG C  P E   
Sbjct: 181 NKERKCIEAEKSVSNDWVKGHLNARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEMGS 240

Query: 407 STHGDDEGDQNVQADQDCYVPAPPDINLAADMEFDDVPITPTSRPSTVGSSQSRKRSRAS 466
            T  D E D  +   +D  +P P  +   +    +D+P TPTS     GS +  K+ R S
Sbjct: 241 QTARDTEEDDMIINLEDFDIPNPHGLEPPSG---EDMPSTPTSMAHDAGSFRPSKK-RRS 300

Query: 467 YEVEALDIMR--QSVAMQETQFTKIADWP 489
           Y  + +D  R  +S+    T      D+P
Sbjct: 301 YSRDLMDTFRATESLLPDPTMLHAFLDYP 325

[Close]

BLAST of Spg030819 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.8e-68
Identity = 164/429 (38.23%), Postives = 218/429 (50.82%), Query Frame = 0


Query: 156 MDRRCFAILCSLLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETISR 215
           MDRRCF ILC++LRT  GL   + +DV+EMV +FLHIVAHDVKNRV RR  ARSGET+SR
Sbjct: 1   MDRRCFTILCTMLRTRGGLEATQYVDVKEMVVIFLHIVAHDVKNRVARRHCARSGETVSR 60

Query: 216 HFNATLSVVIRLYDVLLKKPKPITASCQ-DG----------------------------- 275
           HFNA L+ V+RL+++LLK+P P+T SC  DG                             
Sbjct: 61  HFNAVLNAVLRLHEILLKQPDPVTHSCALDGTHIKVNVSMSDCPRYRFRNGDITTNVTTT 120

Query: 276 ----------------RLMAGADKHPKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRP 335
                            + +   K  KH WT  E+  LVE L++LV EGGWR DNGTF+ 
Sbjct: 121 YVMLVIQMLKDSSLHTEMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKL 180

Query: 336 GYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTISEILGLGCSGFGWNDEFKCIQ 395
           GYL                              +QY+ I+E++G  CSGFGWN+  KCI+
Sbjct: 181 GYL------------------------------KQYTAIAEMMGPACSGFGWNEGQKCIE 240

Query: 396 AEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFGKDKASGGACNVPAEQADSTHGDDEG 455
            EK V+D WVK H +A+GLLNKPF  + DL  VFG+D+A+GG C  P E +  T  D E 
Sbjct: 241 VEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEE 300

Query: 456 DQNVQADQDCYVPAPPDINLAADMEFDDVPITPTSRPSTVGSSQSRKRSRASYEVEALDI 515
           D      +D  +P P  +   +    +D+P TPTS     GSS+  K+ R SY  + +D 
Sbjct: 301 DDMDINLEDFDIPNPHGLEPPSG---EDMPSTPTSMTHDAGSSRPSKK-RRSYSGDLMDT 360

Query: 516 MRQSVAMQETQFTKIADWPDAQDAREFKRRDTIGEMLLAQQELSNDERVALMHILFSDPK 539
            R S+     +  KIA W   +   E      +   L     +  D+ + +   L  DP 
Sbjct: 361 FRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPT 395

[Close]

BLAST of Spg030819 vs. ExPASy TrEMBL
Match: E5GBB2 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-64
Identity = 191/631 (30.27%), Postives = 263/631 (41.68%), Query Frame = 0


Query: 142 LIHESDLCCRESTRMDRRCFAILCSLLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKNRV 201
           +IHESDL CR+STRMDRR FAILC LLR   GL   EI+DVEEMVAMFLH++AHDVKNRV
Sbjct: 1   MIHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRV 60

Query: 202 IRRQFARSGETISRHFNATLSVVIRLYDVLLKKPKPITASCQDGR--------------- 261
           I+++F RSGET+SRHFN  L  V+RLY+ L+K+P P+T++C D R               
Sbjct: 61  IQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTY 120

Query: 262 ------------------------------------------------------------ 321
                                                                       
Sbjct: 121 IKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENG 180

Query: 322 ------------------------------------------------------------ 381
                                                                       
Sbjct: 181 LQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVI 240

Query: 382 ------------LMAGADKHPKHI------------------------------------ 441
                       ++ G   +P  +                                    
Sbjct: 241 ERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYA 300

Query: 442 -WTRQEEARLVESL---------------------------VELVHEGGWRGDNGTFRPG 501
             T  E+ + +E+                            +ELV  GGW+ DNGTFRPG
Sbjct: 301 TTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDSCGMELVSMGGWKSDNGTFRPG 360

Query: 502 YLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTISEILGLGCSGFGWNDEFKCIQA 553
           YLA+L RM+ EK+S C + +T++IDC++++LKR +  I+E+LG  CSGFGWNDE KCI A
Sbjct: 361 YLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVA 420

[Close]

BLAST of Spg030819 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 2.7e-10
Identity = 34/88 (38.64%), Postives = 54/88 (61.36%), Query Frame = 0


Query: 140 FRLIHESDLCCRESTRMDRRCFAILCSLLRTTFGLVGMEIIDVEEMVAMFLHIVAHDVKN 199
           +++++  +  C E+ RMD+  F  LC LL+T   L     I +E  +A+FL I+ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 200 RVIRRQFARSGETISRHFNATLSVVIRL 228
           R ++  F  SGETISRHFN  L+ VI +
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAI 119

[Close]

BLAST of Spg030819 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-07
Identity = 32/132 (24.24%), Postives = 61/132 (46.21%), Query Frame = 0


Query: 272 VELVHEGGWRGD--NGTFRPGYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTIS 331
           ++L+ +   RG+   G FR      +  +   K  S       ++  + +SL+RQ++ I 
Sbjct: 195 IDLMLDQARRGNQIEGVFRKQAWTEMVNLFNAKFESNF--DVDVLKNRYKSLRRQFNAIK 254

Query: 332 EILGLGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFGKDKAS 391
            I  L   GF W++E + + A+  V+  ++K+H  A+  + +P   Y+DL  + G     
Sbjct: 255 SI--LRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCGDSGIE 314

Query: 392 GGACNVPAEQAD 402
              C V  +  D
Sbjct: 315 ENECFVAMDWFD 322

[Close]

BLAST of Spg030819 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-07
Identity = 32/132 (24.24%), Postives = 61/132 (46.21%), Query Frame = 0


Query: 272 VELVHEGGWRGD--NGTFRPGYLARLKRMIKEKMSSCTIDSTSIIDCKVRSLKRQYSTIS 331
           ++L+ +   RG+   G FR      +  +   K  S       ++  + +SL+RQ++ I 
Sbjct: 195 IDLMLDQARRGNQIEGVFRKQAWTEMVNLFNAKFESNF--DVDVLKNRYKSLRRQFNAIK 254

Query: 332 EILGLGCSGFGWNDEFKCIQAEKEVYDAWVKSHSSAKGLLNKPFHQYEDLAFVFGKDKAS 391
            I  L   GF W++E + + A+  V+  ++K+H  A+  + +P   Y+DL  + G     
Sbjct: 255 SI--LRSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCGDSGIE 314

Query: 392 GGACNVPAEQAD 402
              C V  +  D
Sbjct: 315 ENECFVAMDWFD 322

The following BLAST results are available for this feature:

BLAST of Spg030819 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034843.1	1.5e-79	33.79	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK26842.1	1.1e-71	45.90	uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]	[more]
KAA0033487.1	5.7e-71	45.59	uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]	[more]
TYK07921.1	5.9e-68	38.23	hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]	[more]
ADN33754.1	6.7e-64	30.27	retrotransposon protein [Cucumis melo subsp. melo]	[more]

BLAST of Spg030819 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg030819 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SWD8	7.2e-80	33.79	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DTL0	5.5e-72	45.90	Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SW62	2.8e-71	45.59	Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3C7T4	2.8e-68	38.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GBB2	3.3e-64	30.27	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]

BLAST of Spg030819 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	2.7e-10	38.64	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT4G02210.1	1.6e-07	24.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.6e-07	24.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 259..357 e-value: 3.2E-7 score: 31.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 441..457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..413
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 253..544
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 253..544

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030819.1	Spg030819.1	mRNA