Spg030816 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030816
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold11: 28217781 .. 28221444 (-)
RNA-Seq ExpressionSpg030816
SyntenySpg030816
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTAGCCAGGGGCATTTATGACACCCATAGTTTGCCACTGCGCGAAGACAAAACGCAACCCATGAGCGTTGAGGACAGTAAAAAAAATGCGTAGTTGGATACCTTTCATCACAAATGTGGGTAAGCCAAAACGAAAGTATGCGTTTTGATGTCCAATTGCTTTCTGCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTGGAGGATATATATATCTTTTTATGCGTCCAGGGCAAGGAAGATTGGCTGAGTCAGCGCAAGGATGAATCTAAGCACAAGGAGCCTTCTTTAAGCAATGGAGAAAATTTGGCAAAAGTCAAATCTATTTGGGTAATGTGTGCGAGAAAAAGAAGAAAAAGGATGCCAAGATCGCAAGCAATAAAGAGCTGCGTAATTGCCGCAAGGTGGATAACAGACATTGCTTGAGGACAAGCAATAGTTTAAGTTTGGGGGTTTGATATCTTGCGAAAAGCAAGATTATTTATCCTCTAAACTTAAGCTAAAAGAAGGATACAAGGCCCTCAGATGCGTTATCTTAGCGCATAAAGAAAGAAAAAAAGTGATTGTTATAAGCGGCAAGCTATATTTGTGTATGCGATAAGAAATTATAAAATAGAGCGCTAACGCAGCTAATTTAGTTGTTTCAAGTTTCTTCTTAGCGCAGACACACTCCCCTAGATGATTAAGAGACAGAAAAGATGGATGAAAAGACAGCTCTGACGCAAACGGCGCAGCCAATGCAAGTGGAAAAAAAAATAGGCCGAAATATTGCAAGTTGGCTAATAATTTGAACAAAGCAAGTTGCAATTACTTAGTGAAGTCACTTTCCCTCTTCTATAAATAGAAGCTCAAGAGACAGAAGAAATAGAGCCTGAGCAGGGGGATTCATATCTCTGCTCAAGAGGGAGAAGAAAGACGATCAGCAAAAGAATCACAGAGAGAGCTGTGATTAGGAGCAAACTTGCGTGTGAAATGTTTTATTTTATGATGTCTTGTTGTCGCGCATGAGCTAACTTTCCTCTTCAAGGCCTAGCGCAAGCACCTCATGCGGTGATAAGTACATCTTGTAAGCGCATATTTTGATTTAAATGAAACATTGATTGCTTTCTGCTTAGTTGCGATAATCTTTTCATTACCAATCCCCGCTTGGCCAGCTGGATGCGGTAGCAGTATGCTTAATCCTTGACAGGTAACGCATATGGATCTCTCTAAGTAGAACAAGTTAGCGCATGACATGTAGTCTTGGCAGTATTAAATTATTACCGCTAAAGGATATTGCATGCTTGAACTTTGATTGCGTTGTGACCAACTCAGTCCCTTGTAAGTATTAAGAGAACTAAGCTTTACGCATAAACTAGTCAAATAATCAATTGATAGTTTATTGCCAAACGCATAAGGAATACCGGAAGGGAAACTTAGTGATTTTTTCTCACTTAGGCGTCAATGGATCAATTTATCAAAGTTAGCGCTACAAGATTCTTATGAAAGCATGAGGCTGCAACCGCAAAAGCCTTGATACTGCTCGCATTGTGAATTCTCCCTTAAACTCTCATTACTTGTTTTCTTTTATGCAATTAATTACTGTTCAAATTATACCAGCCCTCGTTTTTATTCCCTTGAAGTAATATTTCGCATTTTGAATTTTAAATCAGTAAACATTATTAAGAAACTTCTTTCCCTGTGGATTCGACCCTGGACTCACCAGGTATTACTTGATTTTGTCAGTTTATACTTGGATTGATTAAAATCTACGACTACGAAATCAAACACTCTGATAATCGACCACATACCTGATGACAATATCGAGAATCCACTGACCTTTAATCAGGTAATGGATGACATGGATAAATACAAATTGAGTCAAAAGGATGAACCTTGAAATGGAGTATGTGTACTTCATTTCAGTCTAGTCTTGACTAGAAAGGTTCATAGTCCAGAATCTAGAGTAAAAAGGTTTGCGAACTTTATCGATCCATCTATAGATTGAACTAAAAGTTTCGATCCTGGAATATAAGGTTTAATGCACGTTTAAATCTTATAGTTTTGACCAGAATATTAATAAGTCTTGTGTCGATGGAAGGATTATCAATAGTTTAGTAGCTTTCTTAGTTTTGTATGTGATTGATACCCTACTCATTGGGAATAACGTATTTTATCATAATTGACATTAAAAGCTAGCAGCCTAGTTCCAAATAATATATTTGGAAAGACTTAGTTTGTTCTTAGAATGCAACACGTTCAGAATCACAAGAACAAGATCGCTAGCTCTGTCTCAAATATCTTATATGGACTAAAGTTTTAGCTAGATATAAGATGAGAATTCCAGGAATGGTTTGTTACCTATCCGACATGGAATTCATTAGTCACAGGAGCAGTGTCCTGAGACGCCTCAGAAGGTTGAGGATTTGAGACGGATTCCCCGTGCCTCGACAAACAGTTGTCAGGTTTGGCATATGGTATGCAGTAGGGAATGTCAGTAGATACCAATTCAGTCCATGGTGAGGCACTGGGCTGCAGTGTAAATAACCTCAATTATCTTAGGAGAACGAGGAATTATAAGTTCGTGTATGGTGCTGAGAATCTGATCCTTATAGGATACACTAATTCTGACTTGCACTCCGATCAGGATTCATAGAAATCCACATCGGCCTCAGAATTTACCCTTAACAGGGAGCTATAAAATGGTGTAGCATCAAGTTAGGATGCGTTACAGACTTTATCTTGAAGGCCGAGAATGTTACTAATAGCAAGCAGAAATGTCGCTATTTTAGTCCCAATTTATTAGGCTTTTTAGAGCTTTGATTGTGTTTTTATTGAAAATATTTCATATATTTTGTTATTTGGTCTTTAGGAGCAAAGTTGTGGATTTTGTGGAAAAAGTGCCCAAAAAGGAGCCATTCAAGCCCAATTTCCATGCCTAGGTCAAAGGGGAGTCAAAAGAGATCAATCATGTGAAAAAGGCCCAAAGGAAATGAAGTGGAGGCCCAAAATCAAGCCCAAAATCGCAGCTGAAAGTTCTGGAATTCGCCTAGCGTCGAGACGCTGCAAGGACAGCGTCGCGACGCTGTCCATTTCTTGGCCGGCAAATCGATGACGTCACAGCGTCACGACGCTACCCCATTTCCGAGCCTATAAATAGCTCCCCTTGGTGCCTTGTTTTATCATCAATCACTATTCATTCCATTCCTTCCTTTCTTTCTTGGCTCCTTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGCTTTCTTTAGTGGGAAAATTTTGGGGGAATTTTGGGGAGCATTCTAGGAGGCTCAAGGAGTGCTCGGAGGGATTCCAAGCGTCAGCGACGGGGTCTTCAACGGTCAATTCCTTCCCTTTTATTGTGCTCTTAATTATGCTTTCCATTGTAATTATTGTGAATATTTTAGCTATGTATAGCTAAACCCCAATTTCGAGTATTGAAATGAAATTATAGTTTAAATGTTGTTATAATTGCCTATCTCTAGCCCTTTTATCCTAATTATTTGTATGGATGTGCTTAATGCTTTATGCAATTTGGCCAATTGTGTACTGATCTGATTCTTAATGGAGACTCGACGGAGAGAAGTTAGGATAGATCATAATCCATCCAACTAGTTTA

mRNA sequence

ATGTTTGTAGCCAGGGGCATTTATGACACCCATAGTTTGCCACTGCGCGAAGACAAAACGCAACCCATGAGCGGCAAGGAAGATTGGCTGAGTCAGCGCAAGGATGAATCTAAGCACAAGGAGCCTTCTTTAAGCAATGGAGAAAATTTGGCAAAAGTCAAATCTATTTGGCTGGATGCGGTAGCAGTATGCTTAATCCTTGACAGCCCTCGTTTTTATTCCCTTGAAGTAATATTTCGCATTTTGAATTTTAAATCAGTAAACATTATTAAGAAACTTCTTTCCCTGTGGATTCGACCCTGGACTCACCAGGAGCAAAGTTGTGGATTTTGTGGAAAAAGTGCCCAAAAAGGAGCCATTCAAGCCCAATTTCCATGCCTAGGTCAAAGGGGAGTCAAAAGAGATCAATCATGTGAAAAAGGCCCAAAGGAAATGAAGTGGAGGCCCAAAATCAAGCCCAAAATCGCAGCTGAAAGTTCTGGAATTCGCCTAGCGTCGAGACGCTGCAAGGACAGCGTCGCGACGCTGTCCATTTCTTGGCCGGCAAATCGATGA

Coding sequence (CDS)

ATGTTTGTAGCCAGGGGCATTTATGACACCCATAGTTTGCCACTGCGCGAAGACAAAACGCAACCCATGAGCGGCAAGGAAGATTGGCTGAGTCAGCGCAAGGATGAATCTAAGCACAAGGAGCCTTCTTTAAGCAATGGAGAAAATTTGGCAAAAGTCAAATCTATTTGGCTGGATGCGGTAGCAGTATGCTTAATCCTTGACAGCCCTCGTTTTTATTCCCTTGAAGTAATATTTCGCATTTTGAATTTTAAATCAGTAAACATTATTAAGAAACTTCTTTCCCTGTGGATTCGACCCTGGACTCACCAGGAGCAAAGTTGTGGATTTTGTGGAAAAAGTGCCCAAAAAGGAGCCATTCAAGCCCAATTTCCATGCCTAGGTCAAAGGGGAGTCAAAAGAGATCAATCATGTGAAAAAGGCCCAAAGGAAATGAAGTGGAGGCCCAAAATCAAGCCCAAAATCGCAGCTGAAAGTTCTGGAATTCGCCTAGCGTCGAGACGCTGCAAGGACAGCGTCGCGACGCTGTCCATTTCTTGGCCGGCAAATCGATGA

Protein sequence

MFVARGIYDTHSLPLREDKTQPMSGKEDWLSQRKDESKHKEPSLSNGENLAKVKSIWLDAVAVCLILDSPRFYSLEVIFRILNFKSVNIIKKLLSLWIRPWTHQEQSCGFCGKSAQKGAIQAQFPCLGQRGVKRDQSCEKGPKEMKWRPKIKPKIAAESSGIRLASRRCKDSVATLSISWPANR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030816.1Spg030816.1mRNA