Spg030794 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030794
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold11: 30675731 .. 30676771 (-)
RNA-Seq ExpressionSpg030794
SyntenySpg030794
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTCCCTGTTACCCCCGAAGCACCGAAAGTTAAAACAAAGAAGAAGAAAACACCAGAAGAGAAAGAAGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAAGACCAAGAAGCTGTTCAGAAAGCGGTGGAGGATGTCGTTGTGGAAGAAGATCCGAAAGAACCAGAAGAACAGAATCCAGAGCAGACTGGCCCGATAGTTGCGGATACAGAGGCAGTTCGAGAAGAAAATGCAGAAGACGTTCAAGAAAAGCAGACTGAGAATGTGCAAGAAGAACATGCAGAGGTTGCGCCTGAAGAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCGGAAGTGCCCAAACGCCGCCGTATAGAGCGAAAAGCGGGTCGTGTTAAGGTAGTCCGAATTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAAGAAGCAAGGAGAAAGACTGAAGAAGAAAGGTTGCTCAAGCGAAGGGCAGACAAGGGCAAAAGTGTTGCTGCGGCATCGGAGGAACCTGACGAAATAGAAGAGCCGCAATTGCCGTATGACTGCTTCGTCAACAACCTTGCTGGAGCAAAGTATGCTGAGTTGCTGAAGAGAGACTTCCTGTTTGAGAGAGGATTTAGTGGTGATCTCCCACATTTCCTGAGGACAAGCATGGCGAACCATGGATGGGAATCATTCTATTCCAAGCCTGAACAGGTGAATGCGCATGTAGTGCGCGAATTTTATGCAAATATCGACGAAGAGGAAGGTTTCCGCGTGATCGTTCGAGGAGTAGAGGTCGATTGGAGTCCTGGTGCTATCAACGCACTGTACCACCTTCAAGATTTTCCCCACGCAACATATAATGAGATGGCTGTGGCGCCATCGAATGAGCAGTTGAGTGATGCCGTGAGGGAAGTCGGTGTTGAAGGGGCGCAATGA

mRNA sequence

ATGGCAAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTCCCTGTTACCCCCGAAGCACCGAAAGTTAAAACAAAGAAGAAGAAAACACCAGAAGAGAAAGAAGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAAGACCAAGAAGCTGTTCAGAAAGCGGTGGAGGATGTCGTTGTGGAAGAAGATCCGAAAGAACCAGAAGAACAGAATCCAGAGCAGACTGGCCCGATAGTTGCGGATACAGAGGCAGTTCGAGAAGAAAATGCAGAAGACGTTCAAGAAAAGCAGACTGAGAATGTGCAAGAAGAACATGCAGAGGTTGCGCCTGAAGAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCGGAAGTGCCCAAACGCCGCCGTATAGAGCGAAAAGCGGGTCGTGTTAAGGTAGTCCGAATTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAAGAAGCAAGGAGAAAGACTGAAGAAGAAAGGTTGCTCAAGCGAAGGGCAGACAAGGGCAAAAGTGTTGCTGCGGCATCGGAGGAACCTGACGAAATAGAAGAGCCGCAATTGCCGTATGACTGCTTCGTCAACAACCTTGCTGGAGCAAAGTATGCTGAGTTGCTGAAGAGAGACTTCCTGTTTGAGAGAGGATTTAGTGGTGATCTCCCACATTTCCTGAGGACAAGCATGGCGAACCATGGATGGGAATCATTCTATTCCAAGCCTGAACAGGTGAATGCGCATGTAGTGCGCGAATTTTATGCAAATATCGACGAAGAGGAAGGTTTCCGCGTGATCGTTCGAGGAGTAGAGGTCGATTGGAGTCCTGGTGCTATCAACGCACTGTACCACCTTCAAGATTTTCCCCACGCAACATATAATGAGATGGCTGTGGCGCCATCGAATGAGCAGTTGAGTGATGCCGTGAGGGAAGTCGGTGTTGAAGGGGCGCAATGA

Coding sequence (CDS)

ATGGCAAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTCCCTGTTACCCCCGAAGCACCGAAAGTTAAAACAAAGAAGAAGAAAACACCAGAAGAGAAAGAAGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAAGACCAAGAAGCTGTTCAGAAAGCGGTGGAGGATGTCGTTGTGGAAGAAGATCCGAAAGAACCAGAAGAACAGAATCCAGAGCAGACTGGCCCGATAGTTGCGGATACAGAGGCAGTTCGAGAAGAAAATGCAGAAGACGTTCAAGAAAAGCAGACTGAGAATGTGCAAGAAGAACATGCAGAGGTTGCGCCTGAAGAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCGGAAGTGCCCAAACGCCGCCGTATAGAGCGAAAAGCGGGTCGTGTTAAGGTAGTCCGAATTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAAGAAGCAAGGAGAAAGACTGAAGAAGAAAGGTTGCTCAAGCGAAGGGCAGACAAGGGCAAAAGTGTTGCTGCGGCATCGGAGGAACCTGACGAAATAGAAGAGCCGCAATTGCCGTATGACTGCTTCGTCAACAACCTTGCTGGAGCAAAGTATGCTGAGTTGCTGAAGAGAGACTTCCTGTTTGAGAGAGGATTTAGTGGTGATCTCCCACATTTCCTGAGGACAAGCATGGCGAACCATGGATGGGAATCATTCTATTCCAAGCCTGAACAGGTGAATGCGCATGTAGTGCGCGAATTTTATGCAAATATCGACGAAGAGGAAGGTTTCCGCGTGATCGTTCGAGGAGTAGAGGTCGATTGGAGTCCTGGTGCTATCAACGCACTGTACCACCTTCAAGATTTTCCCCACGCAACATATAATGAGATGGCTGTGGCGCCATCGAATGAGCAGTTGAGTGATGCCGTGAGGGAAGTCGGTGTTGAAGGGGCGCAATGA

Protein sequence

MAKTRARKERDNEEEEVPVTPEAPKVKTKKKKTPEEKEAKRRRRQQRAEDQEAVQKAVEDVVVEEDPKEPEEQNPEQTGPIVADTEAVREENAEDVQEKQTENVQEEHAEVAPEEVNEQEQEARVEVIMPEVPKRRRIERKAGRVKVVRIDTPSPPTTDSERENAEKEEQEKKEAEEKAREEARRKTEEERLLKRRADKGKSVAAASEEPDEIEEPQLPYDCFVNNLAGAKYAELLKRDFLFERGFSGDLPHFLRTSMANHGWESFYSKPEQVNAHVVREFYANIDEEEGFRVIVRGVEVDWSPGAINALYHLQDFPHATYNEMAVAPSNEQLSDAVREVGVEGAQ
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 158..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030794.1Spg030794.1mRNA