Spg030717 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030717
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 25060927 .. 25061700 (+)
RNA-Seq Expression	Spg030717
Synteny	Spg030717

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTCGAATTCTACTATCTGAACTCTCTCTCTTCCTCTAACTCTCTAGTCTTGCTCATCTTCCTTCTACTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCGATGTGCAGGTTTCTTCTGTCTTGCAGGTCACGTCTTCACCCCTCTCAAACAAATTTACTGTTGGTGGCACGTGAAGGTCAGGTGAGTTCTCCCTGTCCAGATTTTGGCATCAACAGTTGGCACCGTCTGTGGGGAAGAAAGCTTGCTAGTAAGATTTGCACATCAATTATATGATGAATAAAAGGATGGAGAAGAAAAATCAGAATCCAAACACATAACCTTCAGAAAATAACTGTCATCCGCAGAAATCACGAGAAGATAATGACGCACAAAGGTCGCCGAGACGAACAGGCTAGGGAGCCGAGACCGAGAAGAAGAGGCTGACGCCAAAATTACTACCCTAGAGGATAAGGTGAGTGGAATAGATCAGAGTTTGTCTAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACCAAAATCCATAGGGATAAGTTGATTAGAGGGTCGAGGCCGAGGCTAGGGCAGCCGAGGCCGAGGCTAAGAATGGTAACCCTCTCTGGAAAACTGGGCTTCTAAACGCATTAAAGGAGCTCGGAAGTCACCAAGGGGACTTGCACAAATCAAAAGATTGTGAAAGACAAGACTTAGAAGACCTGATCGACCAGGTTGATCCACCCTTCACCGATGAAGTCATGAAAGCCGAGGTGTCCTAG

mRNA sequence

ATGGATCTCGAATTCTACTATCTGAACTCTCTCTCTTCCTCTAACTCTCTAGTCTTGCTCATCTTCCTTCTACTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCGATGTGCAGGTTTCTTCTGTCTTGCAGGTCACGTCTTCACCCCTCTCAAACAAATTTACTGTTGGTGGCACGTGAAGGTCAGGTCGCCGAGACGAACAGGCTAGGGAGCCGAGACCGAGAAGAAGAGGCTGACGCCAAAATTACTACCCTAGAGGATAAGAGGGTCGAGGCCGAGGCTAGGGCAGCCGAGGCCGAGGCTAAGAATGGTAACCCTCTCTGGAAAACTGGGCTTCTAAACGCATTAAAGGAGCTCGGAAGTCACCAAGGGGACTTGCACAAATCAAAAGATTGTGAAAGACAAGACTTAGAAGACCTGATCGACCAGGTTGATCCACCCTTCACCGATGAAGTCATGAAAGCCGAGGTGTCCTAG

Coding sequence (CDS)

ATGGATCTCGAATTCTACTATCTGAACTCTCTCTCTTCCTCTAACTCTCTAGTCTTGCTCATCTTCCTTCTACTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCGATGTGCAGGTTTCTTCTGTCTTGCAGGTCACGTCTTCACCCCTCTCAAACAAATTTACTGTTGGTGGCACGTGAAGGTCAGGTCGCCGAGACGAACAGGCTAGGGAGCCGAGACCGAGAAGAAGAGGCTGACGCCAAAATTACTACCCTAGAGGATAAGAGGGTCGAGGCCGAGGCTAGGGCAGCCGAGGCCGAGGCTAAGAATGGTAACCCTCTCTGGAAAACTGGGCTTCTAAACGCATTAAAGGAGCTCGGAAGTCACCAAGGGGACTTGCACAAATCAAAAGATTGTGAAAGACAAGACTTAGAAGACCTGATCGACCAGGTTGATCCACCCTTCACCGATGAAGTCATGAAAGCCGAGGTGTCCTAG

Protein sequence

MDLEFYYLNSLSSSNSLVLLIFLLLSDLSIGGGVASTTPMCRFLLSCRSRLHPSQTNLLLVAREGQVAETNRLGSRDREEEADAKITTLEDKRVEAEARAAEAEAKNGNPLWKTGLLNALKELGSHQGDLHKSKDCERQDLEDLIDQVDPPFTDEVMKAEVS

Homology

The following BLAST results are available for this feature:

BLAST of Spg030717 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030717 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030717 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030717 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030717.1	Spg030717.1	mRNA