Spg030688 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030688
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold11: 29079102 .. 29080924 (-)
RNA-Seq ExpressionSpg030688
SyntenySpg030688
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTCCGGCGAGGTGAAGGAGAAAGAAAGGATGGAGAAGATGGTGTGGCGTTAGGGCTATTTACAAGCAAATGAAGACACAGAGAAAGAGAGATAAAAAACAAACGAAGAAGAAAAAATACATGACGGCGAGACGCTAAACTCCAGGGAAGAGAGGACATTGTTGTTCGGTTGTTCCATCCGACGAGTAGGCGAGGTGAAGATGAGGAAGAGAGATTGTGGATGTGGAAGAAAAGAGAGTGAAAAGGGAGTCTGAACTGAAGAAGAAAGAAGATGAGAGAAGAGTGTTTGTGCTAGGGAAAATTGAAAGAAAAAAGAGTGCTCTTCAAAAAAAAAAAAAAGAAAGAAAAAAGAGTGAAAAGGAAAAGGGACTAAGGGAGTCTGAAGGAAAGTTTGGGAAAAATTGAAAATAATCGTTGGTCTTCCCATGATACACAAATAAATTGAAAAAAAATAAAAAAAAAATAATCGTCGGTTCGGTCGGTTTCGGTCGTTCGGCTCGATTTTTCGGCTTTTTTTGCTCACCCCTACCATATTGCATTACTATGTTCCCAGCCATCCATCTAGTGTTATCCCCAAAATGGTAGGATTATTGAACTGAATTTTATGACCACTCTCACCCATGCAGATCAAAGGATAACCCTAAACGAACAGGAGTTCATAGGAAGCTCAGGATTAAGATTGAGTTACCTAGGTCATCGCATGAAATAATCAGTCTTAACAGTAAACGACGTTATAAAGTAAGAGTGACTTATTTCTCGGTCCTGTCTTGTGTAAACATCTTTTACATAGGATGCCCCTACTCGCATGTCTTTACATGAACGATCCAGGATCACGTCGTTTGCCTTATTCGCAAAGTAGGCCGCATCCATAGTGTTACCAGAACAAGGTACCCAACCTTATTCATTTACTATAGACCATTTAGGTTATATACTTGAACTTGATCTCTGTCCATATTCACTATATAGTTCGAGTATCTCATGTTATAACCATGGATGTTCCTATTGGATTATAAGTTATAAATAAACAATTTCACTGAATAACATCTTTATTTATATAAAGGATAACAAAACTTGAGTTCTAGGACATAAACCCCAACAGCATTTAGAGGAAATCATCGAGCCGCTGAGAAAAGAGCAGGAGGAGTTGAAGACGCGCCTGGACGCACTAATGCTGTATCTGGTGCGCTGGACGGACGCTTTTGGTAGACTGCCTCTTGCGCCAGCGAACCTGATAATTCGTCCTTGTCCGTAGCAAAGACCAGACGGTGTGGGTCCCTCTCAATTGCGCCCAAGTATGCCGCCCTCGCCGCCTCGTTCGCCAAGACCTCAACCTCCGCCAAGGGAGTGATATTTTATTTTCTTAAATTTCATTGACTTATCTGCTATGTAATTTTTGTTGTCGTTGTTATTACTGTTGTTTTCTCCCCCACATCAATGAAAAGAAATTTTTTAGACTCTATCGCAGTTTTAAGTAAAGCCTTTAACTCGTGCCTTAGTCACAAATCTTTCTTTGCGTTAGCTCTTATGATAGATGCTTAGAATCTAAATTTTGCAAGTCTTTTCTACCGCAGCCCAGTGAGAGGATTTCTCTTCTTTAGCTTTCCCTTTTGCCTTAGGAATTTTCTAGTGCTTGATGCTCTAGTGCTGTCGCAGCGTAGTGAGGTGCTTAGCGCATCGCATAAGCATTCCCATGTTCAAGTTTGGGGGGACAATGAGGACATTGCCCAGTTTAAGTTGGGGGGTGCAATAGATGTTAGCGCAATTGTAGCAAATGCGTTCCGCTGGATTCCTTGCGTTAGTAGCCAAGGGCATTCATGA

mRNA sequence

ATGTTGTTCCGGCGAGGTGAAGGAGAAAGAAAGGATGGAGAAGATGGTGTGGCATCAAAGGATAACCCTAAACGAACAGGAGTTCATAGGAAGCTCAGGATTAAGATTGAGTTACCTAGGTCATCGCATGAAATAATCAGTCTTAACAGTAAACGACGTTATAAAGATCACGTCGTTTGCCTTATTCGCAAAGTAGGCCGCATCCATAGTGTTACCAGAACAAGAGGAAATCATCGAGCCGCTGAGAAAAGAGCAGGAGGAGTTGAAGACGCGCCTGGACGCACTAATGCTGTATCTGGTGCGCTGGACGGACGCTTTTGGAATTTTCTAGTGCTTGATGCTCTAGTGCTGTCGCAGCGTAGTGAGGTGCTTAGCGCATCGCATAAGCATTCCCATGTTCAAGTTTGGGGGGACAATGAGGACATTGCCCAGTTTAAGTTGGGGGGTGCAATAGATGTTAGCGCAATTGTAGCAAATGCGTTCCGCTGGATTCCTTGCGTTAGTAGCCAAGGGCATTCATGA

Coding sequence (CDS)

ATGTTGTTCCGGCGAGGTGAAGGAGAAAGAAAGGATGGAGAAGATGGTGTGGCATCAAAGGATAACCCTAAACGAACAGGAGTTCATAGGAAGCTCAGGATTAAGATTGAGTTACCTAGGTCATCGCATGAAATAATCAGTCTTAACAGTAAACGACGTTATAAAGATCACGTCGTTTGCCTTATTCGCAAAGTAGGCCGCATCCATAGTGTTACCAGAACAAGAGGAAATCATCGAGCCGCTGAGAAAAGAGCAGGAGGAGTTGAAGACGCGCCTGGACGCACTAATGCTGTATCTGGTGCGCTGGACGGACGCTTTTGGAATTTTCTAGTGCTTGATGCTCTAGTGCTGTCGCAGCGTAGTGAGGTGCTTAGCGCATCGCATAAGCATTCCCATGTTCAAGTTTGGGGGGACAATGAGGACATTGCCCAGTTTAAGTTGGGGGGTGCAATAGATGTTAGCGCAATTGTAGCAAATGCGTTCCGCTGGATTCCTTGCGTTAGTAGCCAAGGGCATTCATGA

Protein sequence

MLFRRGEGERKDGEDGVASKDNPKRTGVHRKLRIKIELPRSSHEIISLNSKRRYKDHVVCLIRKVGRIHSVTRTRGNHRAAEKRAGGVEDAPGRTNAVSGALDGRFWNFLVLDALVLSQRSEVLSASHKHSHVQVWGDNEDIAQFKLGGAIDVSAIVANAFRWIPCVSSQGHS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030688.1Spg030688.1mRNA