Spg030685 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030685
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 25736236 .. 25737064 (+)
RNA-Seq Expression	Spg030685
Synteny	Spg030685

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCTATTTTATCCTACTTTTCTTCCATTTCTGTGAGTAAAAAAATACTGTAAGTCTGAGATGGCTAAGACAAGAGGGAGAAGAGAAAGAGATATGGAATAAGAAGCGGTGTCAGTTACACCCGACGCACCGAAGAAGAAATCGAAGAGAAGAAAAACCCCCGAAGAGAGAGAGGCCAAAAGATTGAGGAGGAAACAACAAGCTAAAGTAACAGAGGTTGTGAGAAAGGTGATTGAGGATATTACGGAAGAAGTGGCTGAAGAAGAAGAGCCAAAAGGACCTGAAGAAGGGAAAAATTCAGAACAAGGAGATCAACCTGTCGAAACTCAGCAGGAAAATCAAGAAAAGGGAGCAGAGGATGTGCCAGAGCAAGGGAATGGTCAAGAAACCCAAGAACAACAGGTTCAAGGAGAAGTTGTGCAGGAGGTACCGCGTCGTCACCGTCACAAGCAGAAGGCGGGACGTATCAGGGTGGTTAGGACAGACACCCTATCTCCACCAATGACTGAATCCGAGAAAGAAACCACAGAAAAAAAAGATCAAGAGAAAGAAGAAACCAAAAAGAAGGCTGAAGAAGAGGCCCGGATGAAGCAACAGAAAGACAAGGGCAAGGGAGTTGGTGAAGCAATGCCTGAGGCAGAAGAGGCTGAGACTGAGGAGCCAAGAATGTCATATGAGCACTTCGTCAACAATCTTGCCAGAGCAAAATATCTGGAAATGCTGAAACGGGACTTCCTATTGAGAGATGATTTGGAGAAAACCTACCACATTTTCTTACAGCATGGATCACGAACCATGGATGGGAGCAATTCTGTGCGAAGCTAG

mRNA sequence

ATGCTTCCTATTTTATCCTACTTTTCTTCCATTTCTGTGATTGAGGATATTACGGAAGAAGTGGCTGAAGAAGAAGAGCCAAAAGGACCTGAAGAAGGGAAAAATTCAGAACAAGGAGATCAACCTGTCGAAACTCAGCAGGAAAATCAAGAAAAGGGAGCAGAGGATGTGCCAGAGCAAGGGAATGGTCAAGAAACCCAAGAACAACAGGTTCAAGGAGAAGTTGTGCAGGAGGTACCGCGTCGTCACCGTCACAAGCAGAAGGCGGGACGTATCAGGGTGGTTAGGACAGACACCCTATCTCCACCAATGACTGAATCCGAGAAAGAAACCACAGAAAAAAAAGATCAAGAGAAAGAAGAAACCAAAAAGAAGGCTGAAGAAGAGGCCCGGATGAAGCAACAGAAAGACAAGGGCAAGGGAGTTGGTGAAGCAATGCCTGAGGCAGAAGAGGCTGAGACTGAGGAGCCAAGAATGTCATATGAGCACTTCGTCAACAATCTTGCCAGAGCAAAATATCTGGAAATGCTGAAACGGGACTTCCTATTGAGAGATGATTTGGAGAAAACCTACCACATTTTCTTACAGCATGGATCACGAACCATGGATGGGAGCAATTCTGTGCGAAGCTAG

Coding sequence (CDS)

ATGCTTCCTATTTTATCCTACTTTTCTTCCATTTCTGTGATTGAGGATATTACGGAAGAAGTGGCTGAAGAAGAAGAGCCAAAAGGACCTGAAGAAGGGAAAAATTCAGAACAAGGAGATCAACCTGTCGAAACTCAGCAGGAAAATCAAGAAAAGGGAGCAGAGGATGTGCCAGAGCAAGGGAATGGTCAAGAAACCCAAGAACAACAGGTTCAAGGAGAAGTTGTGCAGGAGGTACCGCGTCGTCACCGTCACAAGCAGAAGGCGGGACGTATCAGGGTGGTTAGGACAGACACCCTATCTCCACCAATGACTGAATCCGAGAAAGAAACCACAGAAAAAAAAGATCAAGAGAAAGAAGAAACCAAAAAGAAGGCTGAAGAAGAGGCCCGGATGAAGCAACAGAAAGACAAGGGCAAGGGAGTTGGTGAAGCAATGCCTGAGGCAGAAGAGGCTGAGACTGAGGAGCCAAGAATGTCATATGAGCACTTCGTCAACAATCTTGCCAGAGCAAAATATCTGGAAATGCTGAAACGGGACTTCCTATTGAGAGATGATTTGGAGAAAACCTACCACATTTTCTTACAGCATGGATCACGAACCATGGATGGGAGCAATTCTGTGCGAAGCTAG

Protein sequence

MLPILSYFSSISVIEDITEEVAEEEEPKGPEEGKNSEQGDQPVETQQENQEKGAEDVPEQGNGQETQEQQVQGEVVQEVPRRHRHKQKAGRIRVVRTDTLSPPMTESEKETTEKKDQEKEETKKKAEEEARMKQQKDKGKGVGEAMPEAEEAETEEPRMSYEHFVNNLARAKYLEMLKRDFLLRDDLEKTYHIFLQHGSRTMDGSNSVRS

Homology

The following BLAST results are available for this feature:

BLAST of Spg030685 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030685 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030685 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030685 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 109..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030685.1	Spg030685.1	mRNA