Spg030512 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030512
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTryptophanyl-tRNA synthetase
Locationscaffold6: 33650994 .. 33654096 (+)
RNA-Seq ExpressionSpg030512
SyntenySpg030512
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAACACTCCCACCGCCCTTTCTCTCGCCTCCGATCAAACTCCGGTGTCCACAGAGAGTGTCGGCAGCTGCACTCCTCCCTCCCATCTCCGACGTCGTGTGCGTGCGACCGACGTAGGTAGCAACGACAACAAGTTCTTCCGGTGTGTGTTTTGTTTCTTTGTGATTCCAGCGATCTGAGTAGCTTCGACGTTGTTTCCTCAACGATCAACCAACAGAGGGCTATGAGTTCGGGCAGAGTGCATTTCTCAGGTAGTATCAGAGCGCGAACAATAGCGTTTTGGCGTGTTTCCGACAACTCTTTCGCAGACAGCAGCGTTCTTCTTCATCTTTCCCGCGATTTCAGTTAATTCGAGTCGTGGGTAAGTAATATTTAGTAAATTTCAGGTCTATTAAGAACATATTTTATTCTAAGCTAGAGAATCTTAGGTCGCTTTGCACCGGCGAGAAAGGAATTGCCCCCAAAATCGGCATTCCGCTCCATTTCAAGGTATCTTCAACATTGTCGCTACCAAACTGAGTTATCTTTTGTCCAACACCATTAATTTGATAGTTCTTGTTTGCTATTGTGGGTTTTCTATGTGTCATTCTTTAATATGTATTGCGATGAGGTTTTAGTTTTATTTTTATTCAATTAGGCCCCTGTTACATGTTTACGAGATGGCGAAGAGCAAGGTGGGAGTTGCATTTATGGGAGTAATGAGGCCAAAGTTAGTGAAGAAGTCGATTATTTTGGTGGTTATGGCTTGAATTCAGGGTATTTATGAGCTTATTATTAGTACATGGATTCTTTGTTTTTTTTCTCACTTGTTTTTAACTTCTTATTCGATATTCATAAATTCATTATTTTTGTTTCTATAGGCTATTTGGGTTCATGTATTTGTGTTGTGTTGTATTCGTGGATAACTTACCCCAAATTTGTAGCAATGACAACAGTTTGTCTCTCCAAATAGCAGCAACATCAACAATTTGCAATGGAGTTGTAAGTCTAAATTGAGCAAACAATATGTTGGGTTTTATAGATCTCTTTGTATCAGTAAAAGTATTTTATAGTCTTATTTATTTCTTTTTAGAGTTGTAAGTCTAAATTGTAAATGTTCTATAAAGAATAAACATGGAGACTGCTTGGCTATGAAGGTACATTCATCATGATTTTTACTTTATAGGTTTTTGTTATTGTCTACTTTATTTTCAAGTTTGGTTCATCCCTTTTCTAGTGTGGGTACAATTAGATTGAACTTTCTTGCTTTTGAGGAAGGGATCTCATAAGAAACCAATAAGTAAGCACTAGTAATGTGTTGAACATACTTAATAATTTGTAGTTAAGTTGTCAGATTCCTTATAGTAGTTATGTTGAAGGTTGTCATTAAGCTTTTTTCTTGTAATCATGGAGTGTGAGTTCTCTTTGTTGGTTTGAAGGAGTGGGCCTGTGTTGGAGTGTGATGTGTTTGTACCTGTAAAATGACGGAACAAATCAATATGTAGATTTTTGCTAATGTCTGGAAGTATACTTACATGTTCTTTGCTTTAAGGCACTAAAAGTGTGGGGGATGTTGTTTCAGTTGGATTATGTGGTTCATTTCCTTGTGGAGTTATCAATTCTTCCTGAATTGCAAACTCCATATCAGTTGGCCTGTTATTTGTTATGTTGTTGTGATAGTTGGCAGGTAGACTTTGAAGTTGTGTGGCTTGTTGAGTGTGTAAAACATCAATACTTGTATTAGTTGGCATGCTGCTTGATGTGCTATTGTAGTTGCTATCAAGCAAATTTTGAAGTTGTGATGTTTGTTGATTGGAGTTGATTTCTTCATCTGATGCACCAATACTCTCATTTGATGGATGCTCCACTGCCACAAGTTCACAATTTAATTGTCTCGTCTTTTGTACCTCAATTGCAGTAGCTGGTGTCTCCACATGTTCATTAACACCACGTTTGTCTTGTCTTTTGTACCTCTCAATTACATAACTTTTAAATCATTTTAAGTAGTGACAAATGCTTGGTAAAATTCAACGTCAAGTACAGAAGACCAGGCAATTCAAGTTCGTCACTTTCTTTGAGCTCTGTTCCTTGAAGCTCTTTTTCTTACTTCTTTCTATTGAAATCTAACCCAGGATATATATGAAGTAGATTTTGATGTAACAATTTGCTCTTGTTTTTCATATTTGTTCATTCTCAATTACTTTGCTAGATTGAGTGGTTGATACTACAGCATTGGAGATTGGTAAAGCTCAACCTTCTATTTCCTTCTCCATATGTATATCAAACAATGAGGTACTAGGCCTGAAGCACCCAGATGACAAACAATGCATTTTCAATGATAGAGTGAAGGGTCGTCTAAAGGTTACGAGGGCATTTGGTGCAAGATTTTTGAAACAGGTTTGTAGTTGGTGAACTTACTCACTTTTTTTTTTTCTAGAACTTCCTTTGCTGCTTGATTATGTCCTTCAAATTTAATCAATCATCAATCTTTCGACTGTTATTTCTTTTCTTCTTTATGTTGATTAGATAATCCATTATTTTTCTATTATGAACAATTGGAAAACTTTATTGATGTAGTTTCTGGGAGGGGGTTTCCACTACCCTGGCCTTAAAGGCTATTTTTTCTTCCTTCTGCCTATGCAATCTTTGTGAGGTTTCTTAAAAAAAAAGAAAGAAAGAAATTGATGTCACGTCGTCATTTAATTTATTTTTTAAATAGGAACTACTTTGGTCATTGGAGATACAAATAAGAATGACCAAATTTAGAAAGTTCATTTATTCAAGGCTGTGAGAGACTGTACTCATATAGTTATTGATTACTTGATTATTTATTGAAGGTTTTATAATTGATTATGTTTTGACATGAGCTTTTGGATTAGGATGCCCATTTTTTCTCATCATCTGAATATAGGTATTGGATACTTTTGTAGATATTTTCAAGATGCATTTAAGGTGCCCCTTGTGATACAACTCACTGACAATGAGAAGTGTATGTGGAAAAATCTCTCTGTGGAAGAGAGCCAGAGGCTTGCTCGTGAGAATACGAAAGATATCATTGCTTGTGGTTTTGATATTTCAAAAACCTTTATCTTCTCTGATTTTGATTACGTTGGAGGGTGA

mRNA sequence

ATGGGTAACACTCCCACCGCCCTTTCTCTCGCCTCCGATCAAACTCCGGTGTCCACAGAGAGTGTCGGCAGCTGCACTCCTCCCTCCCATCTCCGACGTCGTCTAGAGAATCTTAGGTCGCTTTGCACCGGCGAGAAAGGAATTGCCCCCAAAATCGGCATTCCGCTCCATTTCAAGGCCCCTGTTACATGTTTACGAGATGGCGAAGAGCAAGGTGGGAGTTGCATTTATGGGAGTAATGAGGCCAAAGTTAGTGAAGAAGTCGATTATTTTGGTGGTTATGGCTTGAATTCAGGCAATGACAACAGTTTGTCTCTCCAAATAGCAGCAACATCAACAATTTGCAATGGAGTTGCACTAAAAGTGTGGGGGATGTTGTTTCAGTTGGATTATGTGGTTCATTTCCTTGTGGAGTTATCAATTCTTCCTGAATTGCAAACTCCATATCAGTTGGCCTGTTATTTGTTATGTTGTTGTGATAGTTGGCAGTTGATTTCTTCATCTGATGCACCAATACTCTCATTTGATGGATGCTCCACTGCCACAAGTTCACAATTTAATTGTCTCGTCTTTTGTACCTCAATTGCAGTAGCTGGTGTCTCCACATGTTCATTAACACCACTGGTTGATACTACAGCATTGGAGATTGGTAAAGCTCAACCTTCTATTTCCTTCTCCATATGTATATCAAACAATGAGGTACTAGGCCTGAAGCACCCAGATGACAAACAATGCATTTTCAATGATAGAGTGAAGGGTCGTCTAAAGGTTACGAGGGCATTTGGTGCAAGATTTTTGAAACAGGTGCCCCTTGTGATACAACTCACTGACAATGAGAAGTGTATGTGGAAAAATCTCTCTGTGGAAGAGAGCCAGAGGCTTGCTCGTGAGAATACGAAAGATATCATTGCTTGTGGTTTTGATATTTCAAAAACCTTTATCTTCTCTGATTTTGATTACGTTGGAGGGTGA

Coding sequence (CDS)

ATGGGTAACACTCCCACCGCCCTTTCTCTCGCCTCCGATCAAACTCCGGTGTCCACAGAGAGTGTCGGCAGCTGCACTCCTCCCTCCCATCTCCGACGTCGTCTAGAGAATCTTAGGTCGCTTTGCACCGGCGAGAAAGGAATTGCCCCCAAAATCGGCATTCCGCTCCATTTCAAGGCCCCTGTTACATGTTTACGAGATGGCGAAGAGCAAGGTGGGAGTTGCATTTATGGGAGTAATGAGGCCAAAGTTAGTGAAGAAGTCGATTATTTTGGTGGTTATGGCTTGAATTCAGGCAATGACAACAGTTTGTCTCTCCAAATAGCAGCAACATCAACAATTTGCAATGGAGTTGCACTAAAAGTGTGGGGGATGTTGTTTCAGTTGGATTATGTGGTTCATTTCCTTGTGGAGTTATCAATTCTTCCTGAATTGCAAACTCCATATCAGTTGGCCTGTTATTTGTTATGTTGTTGTGATAGTTGGCAGTTGATTTCTTCATCTGATGCACCAATACTCTCATTTGATGGATGCTCCACTGCCACAAGTTCACAATTTAATTGTCTCGTCTTTTGTACCTCAATTGCAGTAGCTGGTGTCTCCACATGTTCATTAACACCACTGGTTGATACTACAGCATTGGAGATTGGTAAAGCTCAACCTTCTATTTCCTTCTCCATATGTATATCAAACAATGAGGTACTAGGCCTGAAGCACCCAGATGACAAACAATGCATTTTCAATGATAGAGTGAAGGGTCGTCTAAAGGTTACGAGGGCATTTGGTGCAAGATTTTTGAAACAGGTGCCCCTTGTGATACAACTCACTGACAATGAGAAGTGTATGTGGAAAAATCTCTCTGTGGAAGAGAGCCAGAGGCTTGCTCGTGAGAATACGAAAGATATCATTGCTTGTGGTTTTGATATTTCAAAAACCTTTATCTTCTCTGATTTTGATTACGTTGGAGGGTGA

Protein sequence

MGNTPTALSLASDQTPVSTESVGSCTPPSHLRRRLENLRSLCTGEKGIAPKIGIPLHFKAPVTCLRDGEEQGGSCIYGSNEAKVSEEVDYFGGYGLNSGNDNSLSLQIAATSTICNGVALKVWGMLFQLDYVVHFLVELSILPELQTPYQLACYLLCCCDSWQLISSSDAPILSFDGCSTATSSQFNCLVFCTSIAVAGVSTCSLTPLVDTTALEIGKAQPSISFSICISNNEVLGLKHPDDKQCIFNDRVKGRLKVTRAFGARFLKQVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG
Homology
[Close]
BLAST of Spg030512 vs. NCBI nr
Match: CAB4285523.1 (unnamed protein product [Prunus armeniaca] >CAB4316053.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 112.8 bits (281), Expect = 5.4e-21
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 0 

Query: 232 NEVLGLKHPDDKQCIFNDRVKGRLKVTRAFGARFLKQVPLVIQLTDNEKCMWKNLSVEES 291
           NE+LG     +K  ++  R      +   F AR LK VPLVIQLTD+EKCMWKNL+VEES
Sbjct: 47  NEILGAYERGEKFYLYTGRGPSSEALHLIF-ARGLK-VPLVIQLTDDEKCMWKNLTVEES 106

Query: 292 QRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           QRL REN KDIIACGFD+++TFIFSDFDYVGG
Sbjct: 107 QRLTRENAKDIIACGFDVTRTFIFSDFDYVGG 136

[Close]
BLAST of Spg030512 vs. NCBI nr
Match: XP_008452422.1 (PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 7.0e-21
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Sbjct: 124 KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGG 179

[Close]
BLAST of Spg030512 vs. NCBI nr
Match: PPD91328.1 (hypothetical protein GOBAR_DD11728 [Gossypium barbadense])

HSP 1 Score: 112.5 bits (280), Expect = 7.0e-21
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Sbjct: 119 KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGG 174

[Close]
BLAST of Spg030512 vs. NCBI nr
Match: XP_004246071.1 (tryptophan--tRNA ligase, cytoplasmic [Solanum lycopersicum])

HSP 1 Score: 112.5 bits (280), Expect = 7.0e-21
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Sbjct: 123 KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGG 178

[Close]
BLAST of Spg030512 vs. NCBI nr
Match: KAB2065738.1 (hypothetical protein ES319_A09G111000v1 [Gossypium barbadense] >PPR81909.1 hypothetical protein GOBAR_AA38805 [Gossypium barbadense])

HSP 1 Score: 112.5 bits (280), Expect = 7.0e-21
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Sbjct: 120 KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGG 175

[Close]
BLAST of Spg030512 vs. ExPASy Swiss-Prot
Match: Q9SR15 (Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At3g04600 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.1e-21
Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EK +WKNLSVEESQRLAREN KDIIACGFD++KTFIFSDFDYVGG
Sbjct: 121 KVPLVIQLTDDEKSIWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGG 176

[Close]
BLAST of Spg030512 vs. ExPASy Swiss-Prot
Match: P23381 (Tryptophan--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=WARS1 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 269 VPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG 323
           VPLVIQ+TD+EK +WK+L+++++   A EN KDIIACGFDI+KTFIFSD DY+G
Sbjct: 189 VPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 242

[Close]
BLAST of Spg030512 vs. ExPASy Swiss-Prot
Match: Q5R4J1 (Tryptophan--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=WARS1 PE=2 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 269 VPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG 323
           VPLVIQ+TD+EK +WK+L+++++   A EN KDIIACGFDI+KTFIFSD DY+G
Sbjct: 190 VPLVIQMTDDEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMG 243

[Close]
BLAST of Spg030512 vs. ExPASy Swiss-Prot
Match: P17248 (Tryptophan--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=WARS1 PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 2.3e-14
Identity = 36/54 (66.67%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 269 VPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG 323
           VPLVIQ+TD+EK +WK+L+++++   A EN KDIIACGFDI+KTFIFSD DY+G
Sbjct: 194 VPLVIQMTDDEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMG 247

[Close]
BLAST of Spg030512 vs. ExPASy Swiss-Prot
Match: P32921 (Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-13
Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 0 

Query: 269 VPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVG 323
           VPLVIQ++D+EK +WK+L++E++     EN KDIIACGFDI+KTFIFSD +Y+G
Sbjct: 193 VPLVIQMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMG 246

[Close]
BLAST of Spg030512 vs. ExPASy TrEMBL
Match: A0A6J5VBQ0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS41349 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-21
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 0 

Query: 232 NEVLGLKHPDDKQCIFNDRVKGRLKVTRAFGARFLKQVPLVIQLTDNEKCMWKNLSVEES 291
           NE+LG     +K  ++  R      +   F AR LK VPLVIQLTD+EKCMWKNL+VEES
Sbjct: 47  NEILGAYERGEKFYLYTGRGPSSEALHLIF-ARGLK-VPLVIQLTDDEKCMWKNLTVEES 106

Query: 292 QRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           QRL REN KDIIACGFD+++TFIFSDFDYVGG
Sbjct: 107 QRLTRENAKDIIACGFDVTRTFIFSDFDYVGG 136

[Close]
BLAST of Spg030512 vs. ExPASy TrEMBL
Match: A0A0B0NGP7 (Tryptophanyl-tRNA synthetase OS=Gossypium arboreum OX=29729 GN=LOC108454116 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.4e-21
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Sbjct: 120 KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGG 175

[Close]
BLAST of Spg030512 vs. ExPASy TrEMBL
Match: A0A2P5VSV0 (Tryptophanyl-tRNA synthetase OS=Gossypium barbadense OX=3634 GN=ES319_A09G111000v1 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.4e-21
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Sbjct: 120 KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGG 175

[Close]
BLAST of Spg030512 vs. ExPASy TrEMBL
Match: A0A0D2SW54 (Tryptophanyl-tRNA synthetase OS=Gossypium raimondii OX=29730 GN=B456_006G118600 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.4e-21
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Sbjct: 120 KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGG 175

[Close]
BLAST of Spg030512 vs. ExPASy TrEMBL
Match: A0A6A3ARD2 (Tryptophanyl-tRNA synthetase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110418pilonHSYRG00226 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.4e-21
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EKCMWKNLSVEESQRLAREN KDIIACGFDISKTFIFSDFDYVGG
Sbjct: 120 KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGG 175

[Close]
BLAST of Spg030512 vs. TAIR 10
Match: AT3G04600.1 (Nucleotidylyl transferase superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 8.0e-23
Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EK +WKNLSVEESQRLAREN KDIIACGFD++KTFIFSDFDYVGG
Sbjct: 121 KVPLVIQLTDDEKSIWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGG 176

[Close]
BLAST of Spg030512 vs. TAIR 10
Match: AT3G04600.2 (Nucleotidylyl transferase superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 8.0e-23
Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EK +WKNLSVEESQRLAREN KDIIACGFD++KTFIFSDFDYVGG
Sbjct: 121 KVPLVIQLTDDEKSIWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGG 176

[Close]
BLAST of Spg030512 vs. TAIR 10
Match: AT3G04600.3 (Nucleotidylyl transferase superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 8.0e-23
Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 0 

Query: 268 QVPLVIQLTDNEKCMWKNLSVEESQRLARENTKDIIACGFDISKTFIFSDFDYVGG 324
           +VPLVIQLTD+EK +WKNLSVEESQRLAREN KDIIACGFD++KTFIFSDFDYVGG
Sbjct: 121 KVPLVIQLTDDEKSIWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGG 176

[Close]
BLAST of Spg030512 vs. TAIR 10
Match: AT2G35350.1 (poltergeist like 1 )

HSP 1 Score: 58.9 bits (141), Expect = 8.6e-09
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 238 KHPDDKQCIFNDRVKGRLKVTRAFGARFLKQVPL 272
           +HPDD  CI NDRVKGRLKVTRAFGA FLKQ  L
Sbjct: 626 EHPDDNHCIVNDRVKGRLKVTRAFGAGFLKQPKL 659

[Close]
BLAST of Spg030512 vs. TAIR 10
Match: AT2G28890.1 (poltergeist like 4 )

HSP 1 Score: 50.1 bits (118), Expect = 4.0e-06
Identity = 22/31 (70.97%), Postives = 25/31 (80.65%), Query Frame = 0 

Query: 238 KHPDDKQCIFNDRVKGRLKVTRAFGARFLKQ 269
           +HPDD   + N+RVKG LKVTRAFGA FLKQ
Sbjct: 498 EHPDDASAVSNERVKGSLKVTRAFGAGFLKQ 528

The following BLAST results are available for this feature:
BLAST of Spg030512 vs. NCBI nr
Match NameE-valueIdentityDescription
CAB4285523.15.4e-2164.13unnamed protein product [Prunus armeniaca] >CAB4316053.1 unnamed protein product... [more]
XP_008452422.17.0e-2194.64PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Cucumis melo][more]
PPD91328.17.0e-2194.64hypothetical protein GOBAR_DD11728 [Gossypium barbadense][more]
XP_004246071.17.0e-2194.64tryptophan--tRNA ligase, cytoplasmic [Solanum lycopersicum][more]
KAB2065738.17.0e-2194.64hypothetical protein ES319_A09G111000v1 [Gossypium barbadense] >PPR81909.1 hypot... [more]
BLAST of Spg030512 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SR151.1e-2187.50Tryptophan--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At3g0460... [more]
P233811.7e-1466.67Tryptophan--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=WARS1 PE=1 SV=2[more]
Q5R4J11.7e-1466.67Tryptophan--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=WARS1 PE=2 SV=2[more]
P172482.3e-1466.67Tryptophan--tRNA ligase, cytoplasmic OS=Bos taurus OX=9913 GN=WARS1 PE=1 SV=3[more]
P329211.9e-1362.96Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2[more]
BLAST of Spg030512 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J5VBQ02.6e-2164.13Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS41349 PE=4 S... [more]
A0A0B0NGP73.4e-2194.64Tryptophanyl-tRNA synthetase OS=Gossypium arboreum OX=29729 GN=LOC108454116 PE=3... [more]
A0A2P5VSV03.4e-2194.64Tryptophanyl-tRNA synthetase OS=Gossypium barbadense OX=3634 GN=ES319_A09G111000... [more]
A0A0D2SW543.4e-2194.64Tryptophanyl-tRNA synthetase OS=Gossypium raimondii OX=29730 GN=B456_006G118600 ... [more]
A0A6A3ARD23.4e-2194.64Tryptophanyl-tRNA synthetase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110418... [more]
BLAST of Spg030512 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04600.18.0e-2387.50Nucleotidylyl transferase superfamily protein [more]
AT3G04600.28.0e-2387.50Nucleotidylyl transferase superfamily protein [more]
AT3G04600.38.0e-2387.50Nucleotidylyl transferase superfamily protein [more]
AT2G35350.18.6e-0979.41poltergeist like 1 [more]
AT2G28890.14.0e-0670.97poltergeist like 4 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 257..323
e-value: 5.3E-18
score: 67.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR10055TRYPTOPHANYL-TRNA SYNTHETASEcoord: 268..323
NoneNo IPR availablePANTHERPTHR10055:SF14BNAA01G33520D PROTEINcoord: 268..323
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 267..322

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030512.1Spg030512.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006436 tryptophanyl-tRNA aminoacylation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0004830 tryptophan-tRNA ligase activity