Spg030500 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030500
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold6: 33846559 .. 33849283 (+)
RNA-Seq Expression	Spg030500
Synteny	Spg030500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGAAAAATCAAGAAAGAGAGGTTGACGAAGGGCGAGACGAACAGGCCGCGGTTGTGCTTGAAGAACAGGAACTGGTGCAGGAGAAGGGAACAAAAAAAGAAGAAGGTTGAAGACAGAGCAAGAGAAGAAGAAGCAAAGAAGGCTGAGGAAGAAATTTTGCCCAAGTGGAGGGAAGACAAGGGCAAAGGTATTACTGAGGCATCAGGGGCGGCTGACGAGGTTGAAGAACGAGGATTACCTTTTATTCGCTCTGTCAACCACCTTGCTCGAGCAAAATACCAAGAGATGCTGAAATGGGACTTCCTGTTCGAACGAGGATTTGGCGATGATGTGCCACGATTCTTGCAAACTGGAATAGCGAACCTAGGTTGGAGCCTATTTTGTGCGAAACCAGAGCCTGTTAATTCCAACATTGTTCGGGAATTTTAAGCGAATCTTGATGATCAGGGGGAATTTCAGGTTATAGTTCGAGGAATACCCGTGGACTGGAGCCCAGAAGCCGTGAATGATTTGTTCAATCTCCAAGATTTTCCGCATGCGACCTTTAATGAGATGATGGTTGCACCATCTAGCGACCAACTGAATGCGGCGATCCAAGAGGTTGGCATTGAGGGGGCCCAGTGGAGGTTGTCGAAGACGGAGAAGCGCACGTTTCAGGCTGCTTATTTGAAAAGCGAGGCCAACACCTTGATGGGTTTTATTAGGCTGCGCTTACTGCCGACAACGCACGACTCCACAGTATCTCGGGACCGGGTATTGCTATTCTTTGCTCGATGAGTATTGACGTAGGAAAAATAATTTCTTCTAAGATTGTTGATTGCTGGCGGAAAAAGGTGGGGAAGTTGTTTTTCCCCAACACTATCACGGTGCTATGCCGGAGGGTAGGGGTACCAGAGAGTGAAGATGATATAATTTTACCGGATAAGGGAATCATTGATACACCCAATTTGGCACGACTCCAGCGTACGCAGGAGGTACGACAAGGAGGGCTTATCTATGGCATTAACACGATTCTAGAACAACTGGCACTTTTGGCCAACAGGCAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGACCTATGTTAAGAATCGTGATGCTGGTTTGAAGAGGGCGCTGCAAGAAAATTTTTCAAAACCATATCCAGCCCTTCCTGAATTCCCCGAGGACCTACTGAGCCCCTGGATTCCACCGCCGCCTGTTGAGAAGGAAGATGAAGAAGAAGACTTGGGTCAGGAAGACTAAAGGAGGAAAATTTGGGCGCGCAATCTTTTTGTTGAAATATTTTGTTTGCTCGCGCATTCCTGACCGCATCTTCTTCTATATTTGCTTATTATGACTGTCTCTTTTTAATTTGTCTGCTTTAAAAAATATATCTCTGCTGATGTAATATCTTTTCTTTTTAATGAAATTTCTCGATGTTTTCATTCTATGTGCACTAAGTAATGCTAACTTAACTAATTTTCTTCTGAATTTTTTAAGCTTGGACTGTTTACGCCTTAATTAGATCAAGGTATTATGATCTCCAGAAACCTTTTGCTTGAGCATTTCTTCTAGCATGGACTGTTGCTGCGGCAAAACAGATTTTGGAGGTAGTGTTGACTCATATGATCCACTTTAAGCTTAGTTCTAGTCTCATGCTCAGTTTAAAATTCAGATAGAAAAATTTAAGTTTGGGGGACTTTTTGCTACTCCATGTGTTTTGCTCGAGCATTCCTCTCCTTCAATTAAAATTTGATAGGTTATTGAGTAACCGGGGACATTTGTGATACCCACAGTTTGTCTTCGCGTCAAAAGATAACCTAGGAAATATGAAAAAAATGATAAATTATTCGCTGAAAAAATTGATTGTTGAATATTTTAATGAGAAAATTCATGGAGCAAAAGCTTTGAGGGATGAATGATGATCCAACAGTTTTTCTGTCTCCCATAACTTAGGTGAGCTTCATCATAAAATGTCGCCATTCTGAGGGGCAAGAGATAGAATAACTAAGGATTTTTTAGCTTTATAATGAGTATTAAGCCTAGTTGGTGATGAGCTTGAGGCAAGGGTATACTGCACTATAAAGTGGGTCATCCCATGCTTAAGAGCTTATGATTGTAAGGCTGCTTTAAGTCTGAAAAACAAAAATATAAACCCCTTGAGAATGTGTTTGAAATGTCTGATAATAGAGCTAGGCTATGGTAAGTTCTTAGAATTAAGTTAAAAAGTGGTGATTATTTGTCCATGCTGGAGGAATCATTTTGTTGCAGCAAAGCTTGGTTTTGCAGAGTGCTCAGGTAAAGGTCTAAGGTAGTGTTGGACTGTCTGGTTGAATTAAGCTATTCTTTGTCTAATGTTTTGAATTCTTGAAGGAAGGTCGGTTAGTATTGCTCGGGACGCGCAATAGTTCAAGTTTGAGGGTGTGATAACTATCCAAAAGGTAGTTATTTAGGCCTCATTTTTTATTGATTTGTGTGACCTTTGTGCTTAATAGGGTTGGTTTTAGATAGATATTACATGTTTTAACCCATTTGGAAGAATGGAAGCTTTGGAAATCATTTTGTGCAAAATCTTTTGCTGGGCGACTTGAGGGAGCAAACTTTGTGCTGCAACAAAGATGGGAGCAAAACTGTCACGTCACAGTTCATTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTCGTGATAAAGGAGCACGGAAAGCCTTACACGTGTCCAGGTTGACCTAA

mRNA sequence

ATGTTGAGAAAAATCAAGAAAGAGAGGTTGACGAAGGGCGAGACGAACAGGCCGCGGTTGTGCTTGAAGAACAGGAACTGGTGCAGGAGAAGGGAACAAAAAAAGAAGAAGGTTGAAGACAGAGCAAGAGAAGAAGAAGCAAAGAAGGCTGAGGAAGAAATTTTGCCCAAGTGGAGGGAAGACAAGGGCAAAGGTATTACTGAGGCATCAGGGGCGGCTGACGAGGTTGAAGAACGAGGATTACCTTTTATTCGCTCTGTCAACCACCTTGCTCGAGCAAAATACCAAGAGATGCTGAAATGGGACTTCCTGTTCGAACGAGGATTTGGCGATGATGTTATAGTTCGAGGAATACCCGTGGACTGGAGCCCAGAAGCCGTGAATGATTTGTTCAATCTCCAAGATTTTCCGCATGCGACCTTTAATGAGATGATGGTTGCACCATCTAGCGACCAACTGAATGCGGCGATCCAAGAGGTTGGCATTGAGGGGGCCCAGTGGAGGTTGTCGAAGACGGAGAAGCGCACGTTTCAGGCTGCTTATTTGAAAAGCGAGGCCAACACCTTGATGGGTTTTATTAGGCTGCGCTTACTGCCGACAACGCACGACTCCACAGTATCTCGGGACCGGGTGGGGAAGTTGTTTTTCCCCAACACTATCACGGTGCTATGCCGGAGGGTAGGGGTACCAGAGAGTGAAGATGATATAATTTTACCGGATAAGGGAATCATTGATACACCCAATTTGGCACGACTCCAGCGTACGCAGGAGGTACGACAAGGAGGGCTTATCTATGGCATTAACACGATTCTAGAACAACTGGCACTTTTGGCCAACAGGCAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGACCTATGTTAAGAATCGTGATGCTGGTTTGAAGAGGGCGCTGCAAGAAAATTTTTCAAAACCATATCCAGCCCTTCCTGAATTCCCCGAGGACCTACTGAGCCCCTGGATTCCACCGCCGCCTGTTGAGAAGGAAGATGAAGAAGAAGACTTGGCTTGGACTGTTTACGCCTTAATTAGATCAAGCCTAGTTGGTGATGAGCTTGAGGCAAGGGTATACTGCACTATAAAGTGGGTCATCCCATGCTTAAGAGCTTATGATTCAAAGCTTGGTTTTGCAGAGTGCTCAGGTAAAGGTCTAAGCAAACTTTGTGCTGCAACAAAGATGGGAGCAAAACTGTCACGTCACAGTTCATTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTCGTGATAAAGGAGCACGGAAAGCCTTACACGTGTCCAGGTTGACCTAA

Coding sequence (CDS)

ATGTTGAGAAAAATCAAGAAAGAGAGGTTGACGAAGGGCGAGACGAACAGGCCGCGGTTGTGCTTGAAGAACAGGAACTGGTGCAGGAGAAGGGAACAAAAAAAGAAGAAGGTTGAAGACAGAGCAAGAGAAGAAGAAGCAAAGAAGGCTGAGGAAGAAATTTTGCCCAAGTGGAGGGAAGACAAGGGCAAAGGTATTACTGAGGCATCAGGGGCGGCTGACGAGGTTGAAGAACGAGGATTACCTTTTATTCGCTCTGTCAACCACCTTGCTCGAGCAAAATACCAAGAGATGCTGAAATGGGACTTCCTGTTCGAACGAGGATTTGGCGATGATGTTATAGTTCGAGGAATACCCGTGGACTGGAGCCCAGAAGCCGTGAATGATTTGTTCAATCTCCAAGATTTTCCGCATGCGACCTTTAATGAGATGATGGTTGCACCATCTAGCGACCAACTGAATGCGGCGATCCAAGAGGTTGGCATTGAGGGGGCCCAGTGGAGGTTGTCGAAGACGGAGAAGCGCACGTTTCAGGCTGCTTATTTGAAAAGCGAGGCCAACACCTTGATGGGTTTTATTAGGCTGCGCTTACTGCCGACAACGCACGACTCCACAGTATCTCGGGACCGGGTGGGGAAGTTGTTTTTCCCCAACACTATCACGGTGCTATGCCGGAGGGTAGGGGTACCAGAGAGTGAAGATGATATAATTTTACCGGATAAGGGAATCATTGATACACCCAATTTGGCACGACTCCAGCGTACGCAGGAGGTACGACAAGGAGGGCTTATCTATGGCATTAACACGATTCTAGAACAACTGGCACTTTTGGCCAACAGGCAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGACCTATGTTAAGAATCGTGATGCTGGTTTGAAGAGGGCGCTGCAAGAAAATTTTTCAAAACCATATCCAGCCCTTCCTGAATTCCCCGAGGACCTACTGAGCCCCTGGATTCCACCGCCGCCTGTTGAGAAGGAAGATGAAGAAGAAGACTTGGCTTGGACTGTTTACGCCTTAATTAGATCAAGCCTAGTTGGTGATGAGCTTGAGGCAAGGGTATACTGCACTATAAAGTGGGTCATCCCATGCTTAAGAGCTTATGATTCAAAGCTTGGTTTTGCAGAGTGCTCAGGTAAAGGTCTAAGCAAACTTTGTGCTGCAACAAAGATGGGAGCAAAACTGTCACGTCACAGTTCATTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTCGTGATAAAGGAGCACGGAAAGCCTTACACGTGTCCAGGTTGACCTAA

Protein sequence

MLRKIKKERLTKGETNRPRLCLKNRNWCRRREQKKKKVEDRAREEEAKKAEEEILPKWREDKGKGITEASGAADEVEERGLPFIRSVNHLARAKYQEMLKWDFLFERGFGDDVIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRVGKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQRTQEVRQGGLIYGINTILEQLALLANRQEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLLSPWIPPPPVEKEDEEEDLAWTVYALIRSSLVGDELEARVYCTIKWVIPCLRAYDSKLGFAECSGKGLSKLCAATKMGAKLSRHSSLANFMNRLLLSYFRDKGARKALHVSRLT

Homology

[Close]

BLAST of Spg030500 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 115.9 bits (289), Expect = 8.6e-22
Identity = 83/259 (32.05%), Postives = 118/259 (45.56%), Query Frame = 0


Query: 113 VIVRGIPVDWSPEAVNDLFNLQD--FPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLS 172
           + VRG+ V WS EA+N +F L D    H+ F E +  P   +L   ++ V   GA+W +S
Sbjct: 32  IYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEP---ELITVLETVAAAGAEWNVS 91

Query: 173 KTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV------------------- 232
                T   + L   A     F++ RLLPTTH   VS+DR+                   
Sbjct: 92  AQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIH 151

Query: 233 -----------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARL------QR 292
                      G LFFP+ IT LCR      +E+   L + G ID   +AR+      + 
Sbjct: 152 SEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTES 211

Query: 293 TQEVRQGGLIYGINT-----ILEQLALLANR---QEFAERQTLTFWTYVKNRDAGLKRAL 326
           TQ+          ++     +L+QL  L  R   QE   +Q   FW Y K RD  LK+AL
Sbjct: 212 TQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKAL 271

[Close]

BLAST of Spg030500 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-21
Identity = 79/268 (29.48%), Postives = 119/268 (44.40%), Query Frame = 0


Query: 113 VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKT 172
           V VRG+ V WS EA+N +F L D P    +E +   +   L   ++ V   GA+W +S  
Sbjct: 102 VYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQ 161

Query: 173 EKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV--------------------- 232
              T   + L   A     F++ RLLPTTH  TVS+DR+                     
Sbjct: 162 GAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSE 221

Query: 233 ---------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR---TQEVR 292
                    G LFFP+ IT LCR    P   ++  L + G ID   +AR+ +   T+  +
Sbjct: 222 IRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQ 281

Query: 293 Q---------------GGLIYGINTILEQLALLANRQ-------EFAERQTLTFWTYVKN 326
           Q               G ++  +  + ++L+    +Q       +   +Q   FW Y K 
Sbjct: 282 QPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKE 341

[Close]

BLAST of Spg030500 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus])

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-11
Identity = 67/245 (27.35%), Postives = 106/245 (43.27%), Query Frame = 0


Query: 115 VRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRL-SKTE 174
           VRG+ V    +A+N L  L       F  +  + S  +L    +E+G  G +W   S   
Sbjct: 265 VRGVRVSIPAKAINKLLGLSPPAETDFETLSQSSSFAKLEEIGRELGKAGIRWDAHSNYM 324

Query: 175 KRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV---------------------- 234
            RT++A+ LK  AN  + FIR  L PTTHDS++S +++                      
Sbjct: 325 LRTYRASNLKPNANVWINFIRYSLNPTTHDSSISVEKIILLYCVVTGRTINVGKVVEKAI 384

Query: 235 --------GKLFFPNTITVLCRRVGVPESEDDIIL---PDKGIIDTPNLARLQRTQEVRQ 294
                   GKLFFP+ I  L  + GVPE  DD+++    +K  ID   +++L+   E  +
Sbjct: 385 LYCSKRRQGKLFFPSLIHKLLMQAGVPEYTDDLVIKECEEKWTIDMKAVSKLRERSE--R 444

Query: 295 GGLIYGINTILEQ-LALLANRQEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPE 325
           G  + G+   +E+ L    +  +F   Q       +K   A L   L+ +  K      +
Sbjct: 445 GRELPGVTRAMEELLEQSCSMMDFLIEQRAEMVEKLKTMQADLTTRLKASERKMKKRFEK 504

[Close]

BLAST of Spg030500 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 79.7 bits (195), Expect = 6.8e-11
Identity = 56/175 (32.00%), Postives = 78/175 (44.57%), Query Frame = 0


Query: 113 VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKT 172
           V VRG+ V WS EA+N +F L D P    +E +   +   L   ++ V + GA+W +S  
Sbjct: 93  VYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQ 152

Query: 173 EKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV--------------------- 232
              T   + L   A     F++  LLPTTH  TVS+DR+                     
Sbjct: 153 GAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSE 212

Query: 233 ---------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQRTQE 258
                    G LFFP+ IT LCR    P   ++  L + G ID   +AR+  TQE
Sbjct: 213 IRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARI--TQE 264

[Close]

BLAST of Spg030500 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-10
Identity = 58/189 (30.69%), Postives = 76/189 (40.21%), Query Frame = 0


Query: 192 FIRLRLLPTTHDSTVSRDRV------------------------------GKLFFPNTIT 251
           F++ RLLPTTH  TVS+DR+                              G LFFP+ IT
Sbjct: 51  FLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLIT 110

Query: 252 VLCRRVGVPESEDDIILPDKGIIDTPNLARLQR-----------TQEVRQGGLIYGINTI 311
            LCR    P   ++  L   G ID   +AR+ +           T              I
Sbjct: 111 QLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDI 170

Query: 312 LEQLALLANR--------------QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPA 326
           L+QL  L  R               +   +Q   FW Y K RD  LK+ALQ NF++P P 
Sbjct: 171 LQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPT 230

[Close]

BLAST of Spg030500 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.2e-22
Identity = 83/259 (32.05%), Postives = 118/259 (45.56%), Query Frame = 0


Query: 113 VIVRGIPVDWSPEAVNDLFNLQD--FPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLS 172
           + VRG+ V WS EA+N +F L D    H+ F E +  P   +L   ++ V   GA+W +S
Sbjct: 32  IYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEP---ELITVLETVAAAGAEWNVS 91

Query: 173 KTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV------------------- 232
                T   + L   A     F++ RLLPTTH   VS+DR+                   
Sbjct: 92  AQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIH 151

Query: 233 -----------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARL------QR 292
                      G LFFP+ IT LCR      +E+   L + G ID   +AR+      + 
Sbjct: 152 SEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTES 211

Query: 293 TQEVRQGGLIYGINT-----ILEQLALLANR---QEFAERQTLTFWTYVKNRDAGLKRAL 326
           TQ+          ++     +L+QL  L  R   QE   +Q   FW Y K RD  LK+AL
Sbjct: 212 TQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKAL 271

[Close]

BLAST of Spg030500 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-21
Identity = 79/268 (29.48%), Postives = 119/268 (44.40%), Query Frame = 0


Query: 113 VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKT 172
           V VRG+ V WS EA+N +F L D P    +E +   +   L   ++ V   GA+W +S  
Sbjct: 102 VYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQ 161

Query: 173 EKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV--------------------- 232
              T   + L   A     F++ RLLPTTH  TVS+DR+                     
Sbjct: 162 GAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSE 221

Query: 233 ---------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR---TQEVR 292
                    G LFFP+ IT LCR    P   ++  L + G ID   +AR+ +   T+  +
Sbjct: 222 IRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQ 281

Query: 293 Q---------------GGLIYGINTILEQLALLANRQ-------EFAERQTLTFWTYVKN 326
           Q               G ++  +  + ++L+    +Q       +   +Q   FW Y K 
Sbjct: 282 QPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKE 341

[Close]

BLAST of Spg030500 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.3e-11
Identity = 56/175 (32.00%), Postives = 78/175 (44.57%), Query Frame = 0


Query: 113 VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKT 172
           V VRG+ V WS EA+N +F L D P    +E +   +   L   ++ V + GA+W +S  
Sbjct: 93  VYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQ 152

Query: 173 EKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV--------------------- 232
              T   + L   A     F++  LLPTTH  TVS+DR+                     
Sbjct: 153 GAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSE 212

Query: 233 ---------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQRTQE 258
                    G LFFP+ IT LCR    P   ++  L + G ID   +AR+  TQE
Sbjct: 213 IRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARI--TQE 264

[Close]

BLAST of Spg030500 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.6e-11
Identity = 58/189 (30.69%), Postives = 76/189 (40.21%), Query Frame = 0


Query: 192 FIRLRLLPTTHDSTVSRDRV------------------------------GKLFFPNTIT 251
           F++ RLLPTTH  TVS+DR+                              G LFFP+ IT
Sbjct: 51  FLKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLIT 110

Query: 252 VLCRRVGVPESEDDIILPDKGIIDTPNLARLQR-----------TQEVRQGGLIYGINTI 311
            LCR    P   ++  L   G ID   +AR+ +           T              I
Sbjct: 111 QLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDI 170

Query: 312 LEQLALLANR--------------QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPA 326
           L+QL  L  R               +   +Q   FW Y K RD  LK+ALQ NF++P P 
Sbjct: 171 LQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPT 230

[Close]

BLAST of Spg030500 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-10
Identity = 53/172 (30.81%), Postives = 77/172 (44.77%), Query Frame = 0


Query: 111 DDVIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLS 170
           D V VRG+ V  S EA+N ++ L D P    +E + A +  +L   ++ V I GA+W +S
Sbjct: 7   DTVYVRGVQVPLSTEAINTIYGLGD-PVDEHSEFVEAITEPELATVLETVAIAGAEWNVS 66

Query: 171 KTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV------------------- 230
                T   + L   A     F++ RLLPTTH  TVS++RV                   
Sbjct: 67  SQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQIIH 126

Query: 231 -----------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARL 253
                      G LFFP+ IT +C     P   ++  L + G ID   +AR+
Sbjct: 127 REICAYAARKSGALFFPSLITRMCCNARAPYLVNEEKLHNTGEIDAIAVARI 177

The following BLAST results are available for this feature:

BLAST of Spg030500 vs. NCBI nr


Match Name	E-value	Identity	Description
PON78020.1	8.6e-22	32.05	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
PON46472.1	4.3e-21	29.48	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
XP_024971944.1	1.4e-11	27.35	uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]	[more]
PON35554.1	6.8e-11	32.00	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
PON59596.1	1.2e-10	30.69	hypothetical protein PanWU01x14_158080 [Parasponia andersonii]	[more]

BLAST of Spg030500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg030500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5DXM3	4.2e-22	32.05	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A2P5BCG4	2.1e-21	29.48	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5AGA5	3.3e-11	32.00	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5CEY2	5.6e-11	30.69	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE...	[more]
A0A2P5CPE8	1.6e-10	30.81	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE...	[more]

BLAST of Spg030500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 28..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030500.1	Spg030500.1	mRNA