Spg030489 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAATTGATTAATGCCAAAATGGGGTGCCAATGTAAACCCAGGACTTCTCTAGGATCATTTTCCCTTGTCATCTATTGTTGGTTTAAATTGTTGGGATTACTAAGTTAAAAGATGAAAGTAAAGAAAAGGAAAAGGAAAAGAAAAATGGAAGGAAAAGAAAAAAAAAAACAGAACAAATGTGAAAGAAAAAAAAAGAGAAAAGAAGGAAGTGGGAATGGACAGCAAGGAAACCCACCACCGACAACCACTCTATTCAGCCCATTTTCATTCCATTCCTCATCCTTTTCCATTAAAACTTTCAGAGCACTTTAAGAAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGGGTTCAACCTGTCAACCTCTGGTGTTTTAGTCGGTTTGGGCTACACAGAAGGAATCAAGAGGTGAGGTTTGGTTTTCTTGAAAGTTAGTTCATTTTCTAACAAACTTCATGAAGGAAGCTTGACCTAAATCGAATGAGAAGTTGATGGTTTTTGGATTGGAAAACAGAGCACAGGATTTTCGGGCAAACCAGGAGGATCTCTGGTGTTCTCTGATGTTTTGAGTATTGTGGAGTGCACAAGTCGAATCCGAAGCTCTATCTGGTATGGTTAGAAAGGGTATTCAATATCCTACAACATTTGTGAAGATTCCGTGAGCCAAAAATGACTGTATTTAGGTTTAATTTAAGGAGAAAGATAAGGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGCATCTCGTTTTCATTTCTTCAGGTAAGTTCTAGAGTGTTCGAAAATGAAGAGTTTGATGTATATTTCATTAATTTTGGTTAGTTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAGAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTCGTTATTTGACAGGCCAAGAGGAAATAGGCCGAGTCTACAAACCGGGGAACTAGATAAGACAGTGAGTGACAAAACAAATTTTGAAAATGTTCTTAAACGGTTGTTCATGATTATATGTTTTACATGCTTTTCTATGAATGATACATGGTTTTTGTGAACGGTTTCAAGCATGAGTTTTGAGCTCAGATTTTCTAATGAGGTTTATATACGAGCACGTGGCTAATGGCTTTATGAAAAGTAGTTGAAACGATATTTTTTTTAAAGTGAAGCATTGATAGCGAGCATAGCTAGCTATCTTTAATTATTTAATTTAGCTAGTCTTTTATGATTTTTGGGCCGTTTTATTGTGCTTTAATGTTTATTTTGTAGGAAAAGGTTGACTGGAGCTAAAATGAAAAAGTGGAGTTAATCGGGTGCTCGGGATGCGAAAAGATGCAAAAGAAGGAAAAGAATCAAAAGGGAAAAAAGTCAAAATTCGGTCAAAAGGTGACTAGCGTCTCGACGCTAGCATTCCTTATTCGGATAGGCGCGAAAACGTCGCAGCGTCGAGACGCTGCGACCTTAGCGTCTCGACATGTGTTAGCAAATATTGTTTAATGATTTAAAGTTTTTCACGAGCAAGCTGAGCAAGCTTGAGTTTTACGAAAGATAGCGATAAGCAGGCATGTTTAAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGAAACGTTGGTTGTACTGGGCTTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTATTTCATATGCCTTGCTAGATTTTTATTGACGAATTTGCGAGATATTTTAGAAAGCCTTTTCCATTACACGTCTATGTTAAACGCTTTGATTGAGCATATTTATATGTTTAAAGGTTTATCACATGTTTTTGACTTCCGGATTTAGAGTTTTAAGATAGTCACTCACTGGGCTTCGTAGCTAATTCTTTATAAATGTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCGGATCAAGCTTCAGTACGTGGGTGGAGTTGTAAATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATTGGATAATATAGTCCTAGAGGTCGTGGTTGTATAAATCCTAGTTGTACATGTCTTTGGTTATGATATCTATATCAGGGTATTTCCAAACCGAGATATGTCATGGCGACACCTCGTGTATGTTGATATGTTTTCGGGGTTTCCGTTGTGTTGTGGTTCATATGGAATATTTTATATCCATGATTAGTCTGTTTATCAGGTTCAACGTTTCACTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCAAGTCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGCCAAGGGGTGCCTTTTATAG ATGGACAGCAAGGAAACCCACCACCGACAACCACTCTATTCAGCCCATTTTCATTCCATTCCTCATCCTTTTCCATTAAAACTTTCAGAGCACTTTAAGAAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGGGTTCAACCTGTCAACCTCTGGTGTTTTAGTCGGTTTGGGCTACACAGAAGGAATCAAGAGAGCACAGGATTTTCGGGCAAACCAGGAGGATCTCTGGTGTTCTCTGATGTTTTGAGTATTGTGGAGTGCACAAGTCGAATCCGAAGCTCTATCTGGCCAAGAGGAAATAGGCCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCGGATCAAGCTTCAGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCAAGTCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGCCAAGGGGTGCCTTTTATAG ATGGACAGCAAGGAAACCCACCACCGACAACCACTCTATTCAGCCCATTTTCATTCCATTCCTCATCCTTTTCCATTAAAACTTTCAGAGCACTTTAAGAAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGAATCTGGGTTCAACCTGTCAACCTCTGGTGTTTTAGTCGGTTTGGGCTACACAGAAGGAATCAAGAGAGCACAGGATTTTCGGGCAAACCAGGAGGATCTCTGGTGTTCTCTGATGTTTTGAGTATTGTGGAGTGCACAAGTCGAATCCGAAGCTCTATCTGGCCAAGAGGAAATAGGCCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCGGATCAAGCTTCAGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCAAGTCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGCCAAGGGGTGCCTTTTATAG MDSKETHHRQPLYSAHFHSIPHPFPLKLSEHFKKRVKEEEEEEFRGLRLKKIGKSSCKASHCRIWVQPVNLWCFSRFGLHRRNQESTGFSGKPGGSLVFSDVLSIVECTSRIRSSIWPRGNRPSLQTGELDKTVEIELPVPDTLPTSAESSGSSFRSTGIVRGDDVCWLQVVFRAKLAGGPGGGVTAKGCLL Homology
BLAST of Spg030489 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 155.2 bits (391), Expect = 5.6e-34 Identity = 116/302 (38.41%), Postives = 130/302 (43.05%), Query Frame = 0
BLAST of Spg030489 vs. NCBI nr
Match: KAA0060199.1 (uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa] >TYJ95571.1 uncharacterized protein E5676_scaffold767G00770 [Cucumis melo var. makuwa]) HSP 1 Score: 145.2 bits (365), Expect = 5.8e-31 Identity = 86/143 (60.14%), Postives = 93/143 (65.03%), Query Frame = 0
BLAST of Spg030489 vs. NCBI nr
Match: KAA0064296.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01032.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 2.5e-26 Identity = 86/164 (52.44%), Postives = 93/164 (56.71%), Query Frame = 0
BLAST of Spg030489 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]) HSP 1 Score: 128.6 bits (322), Expect = 5.6e-26 Identity = 85/171 (49.71%), Postives = 92/171 (53.80%), Query Frame = 0
BLAST of Spg030489 vs. NCBI nr
Match: TYK25935.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 127.1 bits (318), Expect = 1.6e-25 Identity = 81/165 (49.09%), Postives = 87/165 (52.73%), Query Frame = 0
BLAST of Spg030489 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 2.7e-34 Identity = 116/302 (38.41%), Postives = 130/302 (43.05%), Query Frame = 0
BLAST of Spg030489 vs. ExPASy TrEMBL
Match: A0A5D3BAD1 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00770 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 2.8e-31 Identity = 86/143 (60.14%), Postives = 93/143 (65.03%), Query Frame = 0
BLAST of Spg030489 vs. ExPASy TrEMBL
Match: A0A5A7VD33 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00370 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.2e-26 Identity = 86/164 (52.44%), Postives = 93/164 (56.71%), Query Frame = 0
BLAST of Spg030489 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.7e-26 Identity = 85/171 (49.71%), Postives = 92/171 (53.80%), Query Frame = 0
BLAST of Spg030489 vs. ExPASy TrEMBL
Match: A0A5A7T9P7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G00060 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 7.9e-26 Identity = 81/165 (49.09%), Postives = 87/165 (52.73%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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