Spg030467 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGCAACACCCGACAGAAAAAACCTCATTCTTCCTTCTCAATCTTTAGCTTTTTCAAATCCAAAAAGGGCAGAAAAGGAGATGATGATGGTTCTTGGGACGAGTTGTCAACTTCGAGCAAGGTGTGGCCGAGCGATGAGGACAAAATTCATCGTTCGGTTGCTGAACCTGGTATTGATAGAAAAGCAAAAGATTACATTGACAAGATCTATCGGAACCGTGTTTTAGAAACCGAGCGCCGCACTGTCACTATTCCTCCTCCTGGAACCAAACTCGAATGA ATGGGAGGCAACACCCGACAGAAAAAACCTCATTCTTCCTTCTCAATCTTTAGCTTTTTCAAATCCAAAAAGGGCAGAAAAGGAGATGATGATGGTTCTTGGGACGAGTTGTCAACTTCGAGCAAGGTGTGGCCGAGCGATGAGGACAAAATTCATCGTTCGGTTGCTGAACCTGGTATTGATAGAAAAGCAAAAGATTACATTGACAAGATCTATCGGAACCGTGTTTTAGAAACCGAGCGCCGCACTGTCACTATTCCTCCTCCTGGAACCAAACTCGAATGA ATGGGAGGCAACACCCGACAGAAAAAACCTCATTCTTCCTTCTCAATCTTTAGCTTTTTCAAATCCAAAAAGGGCAGAAAAGGAGATGATGATGGTTCTTGGGACGAGTTGTCAACTTCGAGCAAGGTGTGGCCGAGCGATGAGGACAAAATTCATCGTTCGGTTGCTGAACCTGGTATTGATAGAAAAGCAAAAGATTACATTGACAAGATCTATCGGAACCGTGTTTTAGAAACCGAGCGCCGCACTGTCACTATTCCTCCTCCTGGAACCAAACTCGAATGA MGGNTRQKKPHSSFSIFSFFKSKKGRKGDDDGSWDELSTSSKVWPSDEDKIHRSVAEPGIDRKAKDYIDKIYRNRVLETERRTVTIPPPGTKLE Homology
BLAST of Spg030467 vs. NCBI nr
Match: KAG6592314.1 (hypothetical protein SDJN03_14660, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.8 bits (364), Expect = 3.7e-31 Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 0
BLAST of Spg030467 vs. NCBI nr
Match: KAG6592308.1 (hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.9 bits (359), Expect = 1.4e-30 Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0
BLAST of Spg030467 vs. NCBI nr
Match: KAG6592316.1 (hypothetical protein SDJN03_14662, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.1 bits (357), Expect = 2.4e-30 Identity = 70/97 (72.16%), Postives = 81/97 (83.51%), Query Frame = 0
BLAST of Spg030467 vs. NCBI nr
Match: KAG6592311.1 (hypothetical protein SDJN03_14657, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139.4 bits (350), Expect = 1.6e-29 Identity = 70/97 (72.16%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Spg030467 vs. NCBI nr
Match: KAG6592313.1 (hypothetical protein SDJN03_14659, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.3 bits (347), Expect = 3.5e-29 Identity = 69/97 (71.13%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Spg030467 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.9e-29 Identity = 71/96 (73.96%), Postives = 79/96 (82.29%), Query Frame = 0
BLAST of Spg030467 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 8.3e-29 Identity = 72/96 (75.00%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Spg030467 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28 Identity = 72/96 (75.00%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Spg030467 vs. ExPASy TrEMBL
Match: A0A0A0K8W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 4.1e-28 Identity = 68/93 (73.12%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of Spg030467 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 7.1e-28 Identity = 68/96 (70.83%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of Spg030467 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 9.8e-14 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 0
BLAST of Spg030467 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 7.3e-09 Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Spg030467 vs. TAIR 10
Match: AT1G48325.1 (Expressed protein ) HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04 Identity = 27/83 (32.53%), Postives = 47/83 (56.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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