Spg030398 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030398
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold6: 26745517 .. 26748752 (-)
RNA-Seq ExpressionSpg030398
SyntenySpg030398
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCCAAGAAGTCTTTCGTTGTTGCTTCGATGTACTTTGTGCCCTACAAACCCTCAATGCTCTATATATGAAGTTAAGAAGCGTTGAGGCCGCACATTTAAACTCTTCAAAACGTAGTCGTTTTGTGCTTCTTCAATGTCGGTTCTACATCGTTATCGAAGCCACAATTGAATGACAGGCCCAAACCGTCATCTAACCTACAATTATCTATCGGCCCATAACCGACATTGAAGCCATCCCTTTAATAACGGGCCACAACTCATCATCTAACCTGCAATTATCTATGACCCATAACCGACATTGAAGCCATCCCTTTAATGATGGGCGAAAACCGACATTGAAAGACATCTTTCATGACAGTTTATAACCGACATCGTTTATATGATTTTCTGAAAAATTCCATCATACCCCGAAAAATACGGCGCCTTTTTTTAAATTATTTTTAATGACGGTTAAAACTCACCATTTGAAGAACCTCTTTCATGATGGTGTAAAACCGACATCGTTTAGAAACTTTTTCGAAAAATTTCCGTCATACTCCGAAAATTACGACGCCTTTTTTTAAATTCATGTTTAATGACGGTTTTTAACCGTCATGGAAGGTGCTCTTTAATGTCAGTTTACAACCGTGATCGTTGTTTAATATTTTTGCGCCATTTTTTAAATATTTATTATGACGGTTTTAAACCGACATGGAATGGTTTATACTCTCCGCATTTTTTTCCAAACATTCCATGATGAAAGTAAACCGTCATGGTACCCCAAATTTCCGAAAATTTTCGTTTTCTTTTTTAAAAGTAGCATCTTTTTAGTAATCCGGCATCTCTGAATCAATCCGTCATTGTTTAAAAAATACAATCCGACACCGTAGCCCCAAATTGTTGTAGTGTTTGCTCCAAGACAAACAAGTTGACAAAACATGATAATTTCACGGTGCAACCTAATGGAACACACCGTAGGATGTGTTGGCACACTTCTTTCACCCACTTACTATAAATACTCTTTCCATTCACCTTGTTATTGATTTATGCAAACACCTTCCGAATGGAGCAGTTGCAGTATATGCAACACGAGACCAAGCATAAATCTCACGATGTGAACTTTCTGGAGAAACATGAGAGTAAAAACTTGATATGAACATCTTGTTTTTATACTTTTCCTCCCACTGAGTATTTTAAATGGTTAGGTATACTTTTACTTAGGCATATTCCGACTAATCAAATATAACCTAAGTCTAGGTGATATGTTCGAGCATAACTATTATACTGAACTTTAACCTATGATGTCTAGGTGATAAACACATTTAAAACCCCACATCGCTCACGCATGCTCATAAAACTGGGTTAACCTAACTTAAGTATCGTATTGATGTCCAGGTAGGAGGTGTTTCCTTTCGTTCATCTTAAGTACCTCCAACCTTAGACAACATCTTACCAGGTGAGTTCTCTTATAACCTTAGCTTTACATGATATCAACCTATTTGATCTATGCAAATTTTGATCGAAATCTAATTCCTAATCTCATTGGAATTCATTAAACCTAAGTGAGCATGCATTTATCTTTGTTATAGATTTTAATGTCTATCTCATTTTATAACGCTTATAAAAACGACGTAAACCTATAACATTCTTCTAACGATTTATATAATGCTAAGGTGGTTTCATGCATCATGCTTGTTCATTCTCGTTTATTAATAAAACAATTATACTAACCGAGCTAAACGAATTTAAAACATTCAACATGCATCTAACATGAAAACCCTAACTCATGCATTCTATTTTATTATAATAGTTATAATAATTAACTAATGCATGAAACATGTTTTCCTATGGTGGGATTTTAAATCTTATGGCGTTCAATAATTCTAATTTAATTTAAACATACATCCATAATGATTAATAAATTAAACACACTAAAGTGGACCGGTTTTAGCATCCTAATCAAGCAAATACTAATATTATTACAATAATAATTAAAAAACCATCTTGAACCGCACCCAAACTCTTCGAACTGACCGGCCAAACCGTATGGAACTTTCTTGAACCAGACCACAATTGAGTTGAACCGGTCTGAAATGGCTTGGAAGGGTCTGAACCGGCCTGGGAGGAGGTGAAGCGATCTGGTTCACCGTTTGAATATGGGCGCGCCATTTTGAATGTTCATCAGCGTCTTGATGCTAGATGATCAGCGTCTCGATGTTGATGCGTCTGGAAGAAGCCACTATTTTCTACCAACTTGATATTTTCGTCTTCTTTCTTCGATTACATCCTAGTTTCAACTCTATCGACTCCAAAATTTATACAGACTCAAGCCAACACATATTTGCCCATAAACATGTAGGCAATTACAACTTTAATCCACAAATTAAACACGAATTTGATGCCAAAACCATAATGAGTCCACTGATGACTTGCAAAAATGTCATCATTTTCCTATTAATTTTAGGTAGTTTTGTGCATGAATTGTGAGCTTTAATGTATTTTTATGTTGATTTTGTAGAAAACCGAGTTCGAGAGGCAAAACCAAGAATTTTACCAATTTTGGGTATAAAAAGAAGACTTTGGGCCATAAAAGAAGAAAGGAAAAGAAGATATTTGAAGTGGAGGCCCAAAAAGCCCAAAAGAAAGAAGAAAGGAGGCCAAAATCCGCGAATGGGGCTTCTAGAAGACCTAGTGTCACGACGCTAGGGCCAGAGCGTCTCGACGCTAGGCAATCAGCAAAGATCATTCTGGAATCACGACACCGTCGCGACACTGCACCAACTTGGGCGGCAAGAAAGGCTATGACGTAGCGTCTCGATGCTGTGCGTCTTGGGCAGCAAATCATCTCCGTTTCTGCTCCTATAAATAGCCCCCTTTCCTTTGGTTGTAATCATCCCATTTTTGGGGAGCTCTCCCCTAGCTCAATAGAGAGAAAACGTGAGAAGAATTGTGAGGAAAAAGGTGGGAATTGATCGAGATTCCAAGGCTCGGGAATCGATATGATCGTGACGGGAGCTTGGGATCAAAACCACGGTTATTTCTATCTTATGTCTTTGTAATTTCTTATTTTAGATTGAGTTAGGACCATGGATCAAGATCATTTTGGCAAGATTATTTCCATTTGTGAGTAGATCTTGAGACATAGGGTCGTTATTCTAGTTAATTGGATAATGTAGCACAATTACTTGGATTATGTAATGAATTTCTTCATATTTCATCTATGCAATTCTTGCTTAATGCTTTTAATCTCTTGAT

mRNA sequence

TATCCAAGAAGTCTTTCGTTGTTGCTTCGATGTACTTTGTGCCCTACAAACCCTCAATGCTCTATATATGAAGTTAAGAAGCGTAGGAGGTGTTTCCTTTCGTTCATCTTAAGTACCTCCAACCTTAGACAACATCTTACCAGAAAACCGAGTTCGAGAGGCAAAACCAAGAATTTTACCAATTTTGGGTATAAAAAGAAGACTTTGGGCCATAAAAGAAGAAAGGAAAAGAAGATATTTGAAGTGGAGGCCCAAAAAGCCCAAAAGAAAGAAGAAAGGAGGCCAAAATCCGCGAATGGGGCTTCTAGAAGACCTAGTGTCACGACGCTAGGGCCAGAGCGTCTCGACGCTAGGCAATCAGCAAAGATCATTCTGGAATCACGACACCGTCGCGACACTGCACCAACTTGGGCGGCAAGAAAGGCTATGACGTAG

Coding sequence (CDS)

TATCCAAGAAGTCTTTCGTTGTTGCTTCGATGTACTTTGTGCCCTACAAACCCTCAATGCTCTATATATGAAGTTAAGAAGCGTAGGAGGTGTTTCCTTTCGTTCATCTTAAGTACCTCCAACCTTAGACAACATCTTACCAGAAAACCGAGTTCGAGAGGCAAAACCAAGAATTTTACCAATTTTGGGTATAAAAAGAAGACTTTGGGCCATAAAAGAAGAAAGGAAAAGAAGATATTTGAAGTGGAGGCCCAAAAAGCCCAAAAGAAAGAAGAAAGGAGGCCAAAATCCGCGAATGGGGCTTCTAGAAGACCTAGTGTCACGACGCTAGGGCCAGAGCGTCTCGACGCTAGGCAATCAGCAAAGATCATTCTGGAATCACGACACCGTCGCGACACTGCACCAACTTGGGCGGCAAGAAAGGCTATGACGTAG

Protein sequence

YPRSLSLLLRCTLCPTNPQCSIYEVKKRRRCFLSFILSTSNLRQHLTRKPSSRGKTKNFTNFGYKKKTLGHKRRKEKKIFEVEAQKAQKKEERRPKSANGASRRPSVTTLGPERLDARQSAKIILESRHRRDTAPTWAARKAMT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030398.1Spg030398.1mRNA