Spg030316 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCTTTTTCCTGAAGCTCTATTTATTCACGAGCCTTCGGTAAGTTCTTCTCACTTCATCTTCTTGTTTCAACCTTTGTCGTTTGCATTCTTCTTTCTTTGTTTCTATTTTCTGTAAGTCCTTTGAGTCTCCAATGGCGAAAGCAGGTACCTGTTACCCCTGAGGTACAGAAAGTGAAAGCGAAGAAAAAGAGAACGCTGGAGGAAAAGGAAGCCAAAAGAAGGAGAAGGCAACAACGGGCTGAGGATCAAGAAGTTGTACAAAAGGTTGTTGAAGGTGTTGCTGCCACAGTGGTTGAAGAAGACCCGAAGAACCAGAAGAACAAAACCCAGAGCAGACTGAGCAAAGAGTTGCAGATACAGAGGAAGTGCGAGAAGGGAATACAGAGGAGGTAAAAGAAAAGCAGTCTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAGGAGGTAATGAGCAGGAGGCTCGAGTGGAGGTGATAATGTCGGAAGTACCGAAACGTCGCCGCATTAAGCGAAAAGCGGGCCACGTCAAGGTAGTCCGAACTGATACTCCCTCGCCTCCAACCAGTGATTCTGAAAGAGAGAATGCAGAGAAATAAGAGCAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAGGAAGCAGAGAAGAAGGCTGAAGAGGAACAGTTGCTCAAGCAAAGGGCAGAAAGGGGCAAGAGTGTTGCTGAAGCATCGGAGCAACCTGACGAAGGGCCACAGTTGCCGTATAACCGCTTCGTCAACAATCTTGCAAGAGCAAAATATGTTGAGCTGCTGTAGAGAGACTTCCTGTTTGAGAGAGGATTTAGTGGTGATCTTCCGCATTTTCTGAGGGTCGGCATTACGAACCACGGTTGGGAATTATTCTATTCGAAGCCTGAATCTGTGAACGCGCAGGTGGTGCACGATTTCTATGCAAATATTGACGAAGAAGATGGTTTCCGAGTGATCGTTCGAGGTGTAGAGGTCGACTGGAGTCCTGGTGCTATTAATGCATTATATAACCTTCAAAATTTCCCCCACGCAGAATACAATGAGATGGCTGTGGCGCCATCTAATGAGCAGCTGAGCGATGCTGTGCGGGAAGTTGGTATTGAAGGGGCGCAGTGTAGGCTTTCAAAAACTGAGAAGAGGACATTCCAGTCATCCTATCTGAAGAGGGAAGCAAATACATGGATGAGATTTATCAAACAGAGGTTGCTTCCAACAACTCACGACTCGACGGTTTCTAGGGAACGGGTTCTGTTGGCTTTCGCGATCTTAAGGTCTCTTAGTATTGATGTAGGGAAGATAATTGCTAGTGAAATATCTTGATGTTGGAAGAAGAAGGTGGGGAAGTTGTTTTTCCCCAATACTATTACAATGCTTTGCAAGAGAGTAGGGGTTCCGGAGAATGAAGGAGATGTCATGTTATATGACAAGGGGATCATCGATACGCCTACCTTGGCACGGCTTCAGCGTACGCAAGAGGCACATCAGGGTGGGCTTGTTTACAGCATCAACACGATGTTAGAACAACTTGCACTGTCGGCCAGCAGGCAAGAGTTTGCCGAGACGCAGGCTTTAACTTTCTGGACTATGTTAGAAGTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAGAATTTTTCCAAACCATATCCAGCCCTTCCATTGTTCCCTAATGATTTATTGAACCCCTGGATTCCGCCCCCACCGATGGAAAAAGAAGAAGATGATGATGAAAATGAGCAGGGTCAGAAGGACTGACGGATGAAGTGGCCGTGAGCGAGCATGATTTTTGTTCTGGAATTTTTGTTTGCTCGCACATTTTCTAACCTCCTTTTCTGTTCATGTTATGTTTGCTTGTTTTTACTTTTCTGTCTCTAGGCCATAAAACTATATGCTTTTGTAAATTTCTTTCTTTTTAATGAAAATTTCAGTAGTTGTTTCTGTTCTATAAGCACTGAGTAACTCTAACTTAACTAATTTTCTTCTGAATTTTTGAAGCTTGGACTGGTTAAGCTTAATTAGATCAAGGTATTCTGATCTCCAGAAACCTTTTGCTTCAGCATTTCTTCTAGCCTGGTCATTGCTGCGGCGAGAAGATTTTAAGGTAGTGTCGATTTATATGATCCACTTTAAGCTTAGTTCTAGTCCCACGCTTAGTTTGAAAATTCAGATATAAAAATTTAAGTTTGGGGGTATAATTCTCAAAATTAAATGATTCATTGGGGACAATGAATAATTCAAGTCTGGGGGACTTTTTGCTATTCCAATTGTTTTGCTCGAGCATTCCTCTCCTTCATTAAAAATTTGCTAGGTTGTTGAGTAACCAGGGACATTTGTGACACCCACAGTTTGTCTTTGCGTCAAAAGATAACCTAGGAAATATGGAAAAATGAAAGAATTATTTGCTGAAAAAAGTTGATTGTTGAAAATTTTGCTGAGAAAATTCATGGCGCAAAAGTTTTGAAGGATGAATGATAATCCAGCAGTTTTCTGTCTCCCAGAACTTAGGTGAGCTTCATCATAAAATGTCGTCATTCTGAGGGGCAAGAGATGGAATAACTTAGGATTTTTTAGCTTTATAATGAGTATTTAGCCTAGTTGGTGATGAGTTTGAGGCAAGGGTATACTGCACCATAAAGTGGGTCATCCCATGTTAAGAGCTTATGACTGTAGGGCTGCTTTAAGTCTGAAAAACAAAAACATTAACCCCTTGAAAATAAGTTTTAAAATGTCTGATAATAGAGCTAGGTTGTGGCAAGTTCTTAAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTTGTAGAGTGCTTAGGTAAAGGTTGAAGGTAGTGTTGGATTGTCTGGTTTGATTAAGCTATTCTTTGTCTAACGTTTTGAATTCCGAAGGGAAGGTTGGTTAGTATTGCTCGGGACGCGCAATAGTTCAAGTTTGGGGGTGTGATAACTCTCCAAAAGGTAGTTATTTAGGCCTTATTTCTATAGGGATTTGTGTGTCTTTTGTGCTTAATAGGGTTGCTTTTAGATATATATTATATGTTTTAACCCATTTGGAAGAATGGAAGCTTTGGAAATTATTTTGTGCAGAATATATTGCTGAGCGTATGGAGGGAGCAAAATCTGTGCTGGAGCAAAGCGAGGAGCAAAACTGCCACGTCACAACTCGTTAGGCAATTTAACAAACTGAATTTTGTTAAGTTATTTTGGGGATAAAGGGGCATGGAGAGCCATCCACGTGTCTAGGTCAACCTAATTCAAGCCTCCTATCACTCTATAAAAGGAGATAGCCACCCAAGTCAAATTGATTCCACTTTTGGGGAAGAGATCATTCTCATTTCTATTTTGGGAGCCGAATAGAGGAGAGAGATTGGAAACCATCAAGAAGGCCATCAATTACAAGCTGTTCAAGGGAATTAATCTTTTCTTGTATTACCTTGTAGTTATGGACATGCTTACTCAGATTGTAACGTGTGTTTCCATGCATTTTATGAACTAAGTAGTTTAAGGCGTTGGTTAGGGAACATGTGATTGCCATGCTTAATTTCTAGTAATAAATATTGATTTAATGCATCTTGATTA ATGATTCTTTTTCCTGAAGCTCTATTTATTCACGAGCCTTCGGTACCTGTTACCCCTGAGGTACAGAAAGTGAAAGCGAAGAAAAAGAGAACGCTGGAGGAAAAGGAAGCCAAAAGAAGGAGAAGGCAACAACGGGCTGAGGATCAAGAAGTTGTACAAAAGGTTGTTGAAGATACAGAGGAAGTGCGAGAAGGGAATACAGAGGAGGTAAAAGAAAAGCAGTCTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAGGAGGTAATGAGCAGGAGGCTCGAGTGGAGGTGATAATGTCGGAAGTACCGAAACGTCGCCGCATTAAGCGAAAAGCGGGCCACGTCAAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAGGAAGCAGAGAAGAAGGCTGAAGAGGAACAGTTGCTCAAGCAAAGGGCAGAAAGGGGCAAGAGTGTTGCTGAAGCATCGGAGCAACCTGACGAAGGGCCACAGTTGCCGTATAACCGCTTCGTCAACAATCTTGCAAGAGCAAAATATCCTGAATCTGTGAACGCGCAGGTGGTGCACGATTTCTATGCAAATATTGACGAAGAAGATGGTTTCCGAGTGATCGTTCGAGGTGTAGAGGTCGACTGGAGTCCTGGTGCTATTAATGCATTATATAACCTTCAAAATTTCCCCCACGCAGAATACAATGAGATGGCTGTGGCGCCATCTAATGAGCAGCTGAGCGATGCTGTGCGGGAAGTTGGTATTGAAGGGGCGCAGTGTAGGCTTTCAAAAACTGAGAAGAGGACATTCCAGTCATCCTATCTGAAGAGGGAAGCAAATACATGGATGAGATTTATCAAACAGAGGTTGCTTCCAACAACTCACGACTCGACGGTTTCTAGGGAACGGGTTCTGTTGGCTTTCGCGATCTTAAGGTCTCTTAGTATTGATGTAGGGAAGATAATTGCTAGGGTTCCGGAGAATGAAGGAGATGTCATGTTATATGACAAGGGGATCATCGATACGCCTACCTTGGCACGGCTTCAGCGTACGCAAGAGGCACATCAGGGTGGGCTTGTTTACAGCATCAACACGATGTTAGAACAACTTGCACTGTCGGCCAGCAGGCAAGAGTTTGCCGAGACGCAGGCTTTAACTTTCTGGACTATCTTGGACTGGTTAAGCTTAATTAGATCAAGGTATTCTGATCTCCAGAAACCTTTTGCTTCAGCATTTCTTCTAGCCTGGTCATTGCTGCGGCGAGAAGATTTTAAGGTAAAGGTTGAAGAATATATTGCTGAGCGTATGGAGGGAGCAAAATCTGTGCTGGAGCAAAGCGAGGAGCAAAACTGCCACGTCACAACTCGTTAG ATGATTCTTTTTCCTGAAGCTCTATTTATTCACGAGCCTTCGGTACCTGTTACCCCTGAGGTACAGAAAGTGAAAGCGAAGAAAAAGAGAACGCTGGAGGAAAAGGAAGCCAAAAGAAGGAGAAGGCAACAACGGGCTGAGGATCAAGAAGTTGTACAAAAGGTTGTTGAAGATACAGAGGAAGTGCGAGAAGGGAATACAGAGGAGGTAAAAGAAAAGCAGTCTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAGGAGGTAATGAGCAGGAGGCTCGAGTGGAGGTGATAATGTCGGAAGTACCGAAACGTCGCCGCATTAAGCGAAAAGCGGGCCACGTCAAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAGGAAGCAGAGAAGAAGGCTGAAGAGGAACAGTTGCTCAAGCAAAGGGCAGAAAGGGGCAAGAGTGTTGCTGAAGCATCGGAGCAACCTGACGAAGGGCCACAGTTGCCGTATAACCGCTTCGTCAACAATCTTGCAAGAGCAAAATATCCTGAATCTGTGAACGCGCAGGTGGTGCACGATTTCTATGCAAATATTGACGAAGAAGATGGTTTCCGAGTGATCGTTCGAGGTGTAGAGGTCGACTGGAGTCCTGGTGCTATTAATGCATTATATAACCTTCAAAATTTCCCCCACGCAGAATACAATGAGATGGCTGTGGCGCCATCTAATGAGCAGCTGAGCGATGCTGTGCGGGAAGTTGGTATTGAAGGGGCGCAGTGTAGGCTTTCAAAAACTGAGAAGAGGACATTCCAGTCATCCTATCTGAAGAGGGAAGCAAATACATGGATGAGATTTATCAAACAGAGGTTGCTTCCAACAACTCACGACTCGACGGTTTCTAGGGAACGGGTTCTGTTGGCTTTCGCGATCTTAAGGTCTCTTAGTATTGATGTAGGGAAGATAATTGCTAGGGTTCCGGAGAATGAAGGAGATGTCATGTTATATGACAAGGGGATCATCGATACGCCTACCTTGGCACGGCTTCAGCGTACGCAAGAGGCACATCAGGGTGGGCTTGTTTACAGCATCAACACGATGTTAGAACAACTTGCACTGTCGGCCAGCAGGCAAGAGTTTGCCGAGACGCAGGCTTTAACTTTCTGGACTATCTTGGACTGGTTAAGCTTAATTAGATCAAGGTATTCTGATCTCCAGAAACCTTTTGCTTCAGCATTTCTTCTAGCCTGGTCATTGCTGCGGCGAGAAGATTTTAAGGTAAAGGTTGAAGAATATATTGCTGAGCGTATGGAGGGAGCAAAATCTGTGCTGGAGCAAAGCGAGGAGCAAAACTGCCACGTCACAACTCGTTAG MILFPEALFIHEPSVPVTPEVQKVKAKKKRTLEEKEAKRRRRQQRAEDQEVVQKVVEDTEEVREGNTEEVKEKQSEDVQEEQAEVAPEGGNEQEARVEVIMSEVPKRRRIKRKAGHVKEKKEAEEKAREEAEKKAEEEQLLKQRAERGKSVAEASEQPDEGPQLPYNRFVNNLARAKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIARVPENEGDVMLYDKGIIDTPTLARLQRTQEAHQGGLVYSINTMLEQLALSASRQEFAETQALTFWTILDWLSLIRSRYSDLQKPFASAFLLAWSLLRREDFKVKVEEYIAERMEGAKSVLEQSEEQNCHVTTR Homology
BLAST of Spg030316 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 97.4 bits (241), Expect = 3.3e-16 Identity = 104/307 (33.88%), Postives = 152/307 (49.51%), Query Frame = 0
BLAST of Spg030316 vs. NCBI nr
Match: EOY13933.1 (Uncharacterized protein TCM_032752 [Theobroma cacao]) HSP 1 Score: 95.5 bits (236), Expect = 1.2e-15 Identity = 61/171 (35.67%), Postives = 92/171 (53.80%), Query Frame = 0
BLAST of Spg030316 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis]) HSP 1 Score: 88.6 bits (218), Expect = 1.5e-13 Identity = 55/198 (27.78%), Postives = 102/198 (51.52%), Query Frame = 0
BLAST of Spg030316 vs. NCBI nr
Match: PIN20995.1 (hypothetical protein CDL12_06316 [Handroanthus impetiginosus]) HSP 1 Score: 88.2 bits (217), Expect = 2.0e-13 Identity = 56/167 (33.53%), Postives = 92/167 (55.09%), Query Frame = 0
BLAST of Spg030316 vs. NCBI nr
Match: KAE8695166.1 (hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]) HSP 1 Score: 88.2 bits (217), Expect = 2.0e-13 Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 0
BLAST of Spg030316 vs. ExPASy TrEMBL
Match: A0A061FAJ6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032752 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 6.0e-16 Identity = 61/171 (35.67%), Postives = 92/171 (53.80%), Query Frame = 0
BLAST of Spg030316 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 7.3e-14 Identity = 55/198 (27.78%), Postives = 102/198 (51.52%), Query Frame = 0
BLAST of Spg030316 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 9.6e-14 Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = 0
BLAST of Spg030316 vs. ExPASy TrEMBL
Match: A0A6A2ZUE4 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110733pilonHSYRG00282 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 9.6e-14 Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 0
BLAST of Spg030316 vs. ExPASy TrEMBL
Match: A0A2G9HTZ4 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06316 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 9.6e-14 Identity = 56/167 (33.53%), Postives = 92/167 (55.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|