Spg030305 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030305
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Locationscaffold10: 21256590 .. 21264847 (+)
RNA-Seq ExpressionSpg030305
SyntenySpg030305
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
atggacagcgtcgcgacgctgttgcgtctggaggcaaaaatcggaaattccagcgactgttcttcgattttggacgagattttcaacgatcttcatcatgaaacacctagtctagacctggacttacagaggataatagatttacaaaatatgcccaaaaatgcaggggcctttacattgacgattcaagaaagcgtaaatctatgaccaaattaatcgaaaccatttacacacaaactataactttcataatgcataaatcccaccaagaaaaaattccaaatttcaatttaaaatcaagaacaactgagttgtctctgataccattgaagggataaaagccccacgcagcggaaagtattaccgaacctactcagagtcttagattctaattgaaataccaatacaatttgcaaaatatacagcaataaatatatatttaatgggctgtacataggctaaaacatgctaaaagatcaactagattgatcctagtgatcaaggatttcataaaaacttacttttgtagaaagtcttgatcaattcgccttttcttgccaataagattgaagacgcagcaaccctcttgtgcgaacaccaccaatcgctacaccggtatatctctaagacttcttgaagcaagagacttgtggagtcttttgggagaaatctctgagagaaggagagacaatgggatgcctttcacccaccccaggggtcgtaatataaggtaaggccaagacctttcccaaataggaaaaggtctaggaataagttcaaatctatttttgaacaatatctaattttataattattaattacccaattaaatatcacatatttaatcctagggattttattaaaattaaaattaatatgaatccaattcatttaaattatttgaactctttcaaatattctctgtcctaataggaaaaggtctctaattttaataattaattaattccatgattattaattacccattaaatatcatatatttaatcttagggattttattaaaattaatatgaatccaattcatattaagtttatttgaactctttcaaatattttgtctcaagacttaatttttgaaattaattcaaaaatatattataaagtttcataaactttatattataatgcattatatacattatacgattccccaaataaattgaacactttcaatttacaatttatatttgtttgcttcaagtcttttaacgagctaccagtgggacctaatggacctagagatcagaagctccaacgatacgagactaatcggcttaaactcattaaccaagttagtctccattcgttaactgtgggtcattctactaaagaccctctgctgcactcttctcactgcagaatattctgtgtccaccgatatcgaccaatactacaagtcagtccttcacggtgttcgtatcccagctggggtcaaattaccgttttacccctggttacatctttgtccttaagtccccagtgctcctctaatgaacaacctgtttgaggtccaaccaacaaacataagtccctctcgtgccatagagagggttgggcccattgttcaagtcccggagacaccacttaagggaacacacctctacttaccctagagtcaggaaggagtgaatcccatcttgtgtgattatgttcccagctctccactcggtattgtccccaaaattgtaggcttattgagtcggcgtgctggccactctcacccatacaaatcaaggacaactcctcgtgaacaggagtccataatccactcaggattgagactaagttgtctaggtcatcctatgaaatagaaaccaaccaactaacggtttacagtcagtggttaactatttcgcagtccggtcttatgcaaactcattgcataggatacccccactcgcatgtcaactacatggacgcgttggatcatagcgtttgtatcataaacaaagtggccgtatccatagtgtcaccaggataaggtacccagccttatccctatgctatagaccttttaggttgttacttgaacatcgatccccgtatgtccccacatactagttcaagttacataaacaaccttggatcttagtttattggatttgggtcaaatagtgcaatatttaacaataacattttattgaagaaactaaataacactttattaaatacaagtataaaatttgttttacattcttatctacgagtttttaggcataaaacccaacagtaataccctttcttagagttctgcatcgaatatcgtacaacattttgtcaatatatgatgcttgaaacagtgctagcgttttttctttctatttcttatgatttgaatgcccataacaaattgagtctcacccgaatctttcatttggaattgagttgctagcaattgttttatgtcagtcagaaatcctacattattcccaataagtaggatatcatctacatatagaactagaaaagctacagtggatttgacgattttcttataagcacaaggttcgtcaacattctgctcaaagccatacgttttgatcgcagtgtcaaaacgtatattccaggatcttgatgcttgttttaatccataaaggatcgtttaagttgcaaaccttttgctcatcaccctggactatgaatccctttggttgagcgatatagatagtctcttcaagattgccgttcaaaaaagttgtcttaacatccatttgccatatttcataatcataaaatgtggcaatggataagagtattctaatcgacttaagcatggcaatagggaaaaagtttcttcaaaatccactccttcccgttgggtaaaaccctttgccacaagtcgagccttaaaggtttgaaccttcccggcttggtctcgttttattttgtagatccatttgcaaccaataggttttaccccattcggctgctctacaagttcccagaccgaattgaagtacattggctccatttcgagatccatggctttgatccactggtccttatcaacatcattcattgcctggttaaagatcaatggatcctctataccatcatcaaatatgatggtttgagttttctgttaaacccatgtaacggtcggttgtattataaccctcccactacgtcgaggctctctcactatttaagatggatgtgtttgatcaacaacttttgatggaccagcttgataaacaacttttgtaggttcttttgtagtttttcttgaaatctcatctaataccagtttactgcgagatcgatgaATCTTTTATGTGATCTTCCTCAAGGAATATAGCGTTTGTCGATACAATCACGTTATTTTCCTGAGGATCGTAAAATTGACCACCTTCGTTTCTTTAGATATCCCACAAACAGGCACAATTTTGAACGTCGTTCCAATTTCTTTGTGTTTGGACCAACACTGTTGCCAGGCATCCCAAAATTCTGAAGTGACGTAAACTACCTTTATGCCCTCCTCCATAGCTCATAGGGTGTTTCAGAAACACTCTTAGAGGGAACCATGTTCAAAATGTATACGTCAATCTCAACTGCATATCCCAGAACGAATCAGGCAACTGAGCATAGCTCATCATTGATCGAACCATGTCTAACAAAGTTCGGTTTCTCCTCTCTGATACACCATTTTGTTGTGGTGTAGTAGGGGCTGAGAGTTGGGACGTGATTTCATGTTCTATCAAATAGTCTTGGAATTGTAGGTCCATATATTCTCCACCTCGATCGATCGTAGTGTTTAATACTCGTTTTACCTAAGTGGTTCTCAACCCCGATCTGTACTCTTTGAACTTTTCAGGGCTTCAGACTTGTGATGCATTAGGTAAAGGTAGCCATACCTTGAATAATCACAATGAAACTGATGAAATATTCATACCCTCCTTGTGCTTTTACATTCATAGGACCACAGAGATCCGAATGCACGAGTTATAAGGGTTCTGTGGCCCTATAACCTTTTTTCCGAAAAGGTCGTTGGTCACTTTTCCCTCGAGGCAGGACTCACATGGTGGCAACGAGTCATCTTCCTACTGATTTAGTAGTCCACTCTTTACCAATCTTTCAATCCTATGCAATTTATGTGGCCTAAGCTCAAGTGCCAAAGAATAGGTATTGGGAGAAACTTTCCTTTTGTTTTGAGTTTCCGCTACTTTAAACATTTACGTATTAAAATAGCTTTAACTTGAAATTGGCCTAACACGTATAAGTAAGTTTTGCAGAACATATATGCATACCTCTTTTGTTAACAAACACTTCATTAATATCAAAAGATACTTGGTATTCATGTTCAATCAAACAAGAGATAGATTTAAGTTCCTTTTAATATCGGAACGTACAAGACATTTTCAAGTAATAAAATCTATCTCCAAAAGACAACTTGAGAGTTCCTAAAGCTCTGGCTGAGATGACCTCTCCAGTTCCAACTTTGAGAGTTACCTCGCCATCTGCAGCATGTGCCAGGAACTAATTTCCTGTAAAGAATAGCATACATGGTTAGGTCCCTCCTGAATCTAATATCTAGGCAGAGTTATCGTTGCCTCAACTAAACATGTTTCGATAACGAGCAAATCAAATTTACCTTGGTTTTCCTTTTCAGCCTTCTTTTCTGCAAGGTACTTAGGATATTGCGTTTCCAATGTCCATCTACATTAGAGTGGAAACATTTTCCTTTATCTGCAGCTTTTGTTTTTGCCTTGCTTCCCAGTGGAGCTTTCCTTTCCCTTTTTCCTTCTTTTTCTTCATCTGAATACTCTATTCTTAGAAGTGGAAGGTTCAGACTTGGTTCCTGAAGATGATCCTTTTTGGAACCTCTTGGTGGTGGCAACGTTTGCTTCCCTTCTTGTCCCCTTTTTGTGAGACTTTGGTAGGTCTGGAGCTCGTTCAACAAAGTAGTCCAGGTTGTAGTCTATTTGTTCATAACAGCGTTTGTCCTGAAATGAATGAAGCTCTTCGGAAGAGACTCCATTATAAAACTAACTTGACTACCCTCGTCTATGGTAGCACCGTTTACTTCAGCGATATTAGAACTGAACCATCATGTTCAAAACATGTTCCCTAACAGAAGCACCTTCCTTCATTCGGGAATTGTAAACATTCTTGAGAGCTTCGTGTCTAGTTTGTGAGGACGGTTGTCCAAACGTACCTTGCAACGAAGTCATTATCTCCATTGCGGTGACCATCCTCTCGTGCTTTTTAGACAAGACATCTGAAATGCTTGCTAAGATCACTACTACAAAAATAGCCTTAATGACGGAAAGATAAAAGGGTGCGAGCCTTTAATAGGACGGACGAAAAAATGCACAGCCACTTTAATGTCGAACGCATGTTTTTATGAAATTTCGGGCTTTGCATCGCCGACCGTTAAAAGCCCAAAATGTGCGTCCGACGTTAAAAAGTGGTCGTCCTCCCGTTTTTTCATTTCCGTCCCGCCCTCCCGTTTTTCATTTCGCCCGTTCTCTTCCATCTCTCTTCAGTCTCACACTACAACAAAACAAACCCTCGCAGTCCTCTCACCAACGACAACTTGGGTTTCTTCCTCTCATCGAATACTTCCTCTCGCTGATTCGATTTTCTTCGATGAAAAAGCCAGATTTTGTTTCTCACCGATGACAACTGGGGTTTGGTAGATTACAAAACACAGGAGAGGTTGTGGGTGGTTATGGAAGTGTAGTTCATGGGTGATGAACTCTGATCTGTGTCGTGGGTGGTTACTTCTCAGATCCGTGCGTGGCAGCTAGAACTCCTCAGATCTATCCGTGGGTGGGTAGTTCGGCACTGTTTGTGGTCGTGAAGGTGTTGTCCATGGGTGGTCGTGAGTGGTGAACTCAGATCTGGGTCATGGGTATGGTGAACTCTTCAAATTTGCGCGTGGGTGGCTATGGAGGTTTCATTCGTGGATGGTAAACCCAGATCTGTATAATGGTTGGTGAACTCCTTAGATACTTGCATGTGTTTCCGATTCAATCACCTTGGGTAGCTACAGAGGTGTTGTTCATGGGTGGCCATGTCTTTCTTTTTTAATTTGTGTTCTCAACCCTATATTTTCTTCTCTTTTTGGGGGTTCTTGATTGTTTATTTGCTCTATTTTATTTACTCTTACAGGAATTGCTTGGAAGTTGAAAAGGGGAACAATTTTTATGACATCCAGTTCAATACTAGGCTTGTTAAATCAACCATTGTTCATTTGGAAGGTGTAGTCTTTATTAGCTCTTTTGATTAAAGATAAGGGTTTATCTTTCTTTCCAGCTAGTTTTATTTATAACATTTTAAGATCTCGTTATTCCTCCCCATAAGAACTAATTACTTACAATGAAAAGCACCAATAAAACTCCTACATAAAAAGAAGCCGATTTAAGACGAACACAATTTAGGCTGAAAAATTCCAAACTGCGATCATGTTATTGATCATCCTATGCATTTATTTTTCCCCAAATGTTTAGAAATCTTCATTTACAATGAATGCACATTTCATTAATGTAATGTTAGATTCATATTACTTCTTTGTATGGTAGATGCAGGTTTTTGGTTTATAGTTAGTTGTTCATCGTAGACCTCATTTTTTTTCGAGTTATGCAAGTGTCATGAAGTCATATTTGTTGGAACGACAATGTATTCTCAAAGCTCTATGGCTTATCAGGATGTGTTCTTCTTTTATTCTCTTAGTCATAATTATACATTCATTGTAAGTATTGTAATTTTTGTAGGCTTTGTATATCTTATTATCCTTTATGGGTGTGTTTATAAATAATTCTAGCTCTATATCCTCATCATACATCTAGAGGCAAGAGGCTTAAAACTTATGAACTTTGTTTGCTGTGACTTTGGGTGCTAGATTAAGCCTAGGTAGGTAGCCAGCTACTATAGTTTGAACTCATTCTCTCTATGCTCCTTACTTATTTACATTGGTCACACTCCTGATGGTTTAGATTAGGTATTAAAGTCCCTCTTCCAACTTAACATGGGTGGTGTTTGTTTTTCCCCCTTAAAAATACACCGTGAAATAAAAAATAGAATTCTCGAACCATTGATAAAAAATAGAAAATTCTTGACACCAACCATTAATAAAAAAAATTGAATTCTCGAACCACTGGTAGTTGCTCATCACTAAACATTTTGATTATCCCATATGCATTGAGTTTCTCCAATGCTGCAGGTGTCAACACAGAACTTTAAAGTACCAAAAGACAAGGTTTGTATCTTCCGTTTTTTGGGTAGACTTCGCTTAAACGTGCAGTCTAATTGTCATGTTTTTCTTGTTGATTGATAAGCAATTTGTAGTTTTGCTTGCTTATCAAACAAATTGAATAGGCATTGAGAAACAAAGTTGTAAATGTGATTACATATTAGGCTTGGAGAGCTTGGATTATGAACTTCACTGTGGGCTTAGATTATCAGATTTCGTGCCTGAAGTGAAAGTTGAAACTTTGGCTGTAATTCATGGAGACCTGATTCATCAAAGGTTTGCGGAAGGAATACTAAAACTATTTCATTAGTTAGTAGACAATAATGGTTTGTCTTTAAATTTGTATTATTATCAACTTATCTTCAAGCTGATTGTTGTCAAATTTCACTCATATGCGTGAACTAAAGCTTTGAGAATTAGTTTCCAAAATCAGGTTGCATGTGTATAGGCTTAAGATAATTGGTGGGTTATGTCAAATTCTACTGTGAGTGGTTTTCAAAAATGACAAAAGTGTGTGTAAAACCTTTCTAGCTTAGGAAATAGGTAAGTTAGGCACCAAAATTAAATAAGCTTCTTAGATATCATCCAAGATATCATTTCTCAAATAGGTAAGTTAGGCACCATCAGATTTGAAGGTCGTTTATCGCACCGTCTTAGATCTCTCATTCTTTCTTTCTTTTCGTGATGTTGCAATGTTTTTTGTTTGCTTAATATGATTTGGGTCACTTAATAGTTGTTAGGTGTTTTATATTCCAAAAAAAAATAGTTGTTAGGTGTTTTTTTAGGTCACTCAATAGTTGTTAGGTTTTTATTATTATCTCATATATTACCTTCTATTAAGTGCCATTTTGTGTTACAGCAGTTGATGGACAAAATAAGAAGAAAGGAAAGTCATATATGTTGTCCTTTTTTACCTTTTTTTCTATTTCTTTTGTAAATGTTTAATTGCATTTTTTCACTGGTACATAGAGGAGGAATGGATGAGATGGAGTTCGCAAAGGCTGAGAGTAATATGAATGATTTGCTATCAAAGTACCATTAG

mRNA sequence

atggacagcgtcgcgacgctgttgcgtctggaggcaaaaatcggaaattccagcgactgttcttcgattttggacgagattttcaacgatcttcatcatgaaacacctagtctagacctggacttacagaggataatagatttacaaaatatgcccaaaaatgcaggggcctttacattgacgattcaagaaagcaccctctgctgcactcttctcactgcagaatattctgtgtccaccgatatcgaccaatactacaagtcagtccttcacggtgttcATCCGTGCGTGGCAGCTAGAACTCCTCAGATCTATCCGTGGGTGGGTAGTTCGGCACTGTTTGTGGTCGTGAAGGTGTTGTCCATGGGTGGTCGTGAGTGGAATTGCTTGGAAGTTGAAAAGGGGAACAATTTTTATGACATCCAGTTCAATACTAGGCTTGTTAAATCAACCATTGTTCATTTGGAAGGTGTAGTGTCAACACAGAACTTTAAAGTACCAAAAGACAAGAGCTTGGATTATGAACTTCACTGTGGGCTTAGATTATCAGATTTCGTGCCTGAAGTGAAAGTTGAAACTTTGGCTGTAATTCATGGAGACCTGATTCATCAAAGAGGAGGAATGGATGAGATGGAGTTCGCAAAGGCTGAGAGTAATATGAATGATTTGCTATCAAAGTACCATTAG

Coding sequence (CDS)

atggacagcgtcgcgacgctgttgcgtctggaggcaaaaatcggaaattccagcgactgttcttcgattttggacgagattttcaacgatcttcatcatgaaacacctagtctagacctggacttacagaggataatagatttacaaaatatgcccaaaaatgcaggggcctttacattgacgattcaagaaagcaccctctgctgcactcttctcactgcagaatattctgtgtccaccgatatcgaccaatactacaagtcagtccttcacggtgttcATCCGTGCGTGGCAGCTAGAACTCCTCAGATCTATCCGTGGGTGGGTAGTTCGGCACTGTTTGTGGTCGTGAAGGTGTTGTCCATGGGTGGTCGTGAGTGGAATTGCTTGGAAGTTGAAAAGGGGAACAATTTTTATGACATCCAGTTCAATACTAGGCTTGTTAAATCAACCATTGTTCATTTGGAAGGTGTAGTGTCAACACAGAACTTTAAAGTACCAAAAGACAAGAGCTTGGATTATGAACTTCACTGTGGGCTTAGATTATCAGATTTCGTGCCTGAAGTGAAAGTTGAAACTTTGGCTGTAATTCATGGAGACCTGATTCATCAAAGAGGAGGAATGGATGAGATGGAGTTCGCAAAGGCTGAGAGTAATATGAATGATTTGCTATCAAAGTACCATTAG

Protein sequence

MDSVATLLRLEAKIGNSSDCSSILDEIFNDLHHETPSLDLDLQRIIDLQNMPKNAGAFTLTIQESTLCCTLLTAEYSVSTDIDQYYKSVLHGVHPCVAARTPQIYPWVGSSALFVVVKVLSMGGREWNCLEVEKGNNFYDIQFNTRLVKSTIVHLEGVVSTQNFKVPKDKSLDYELHCGLRLSDFVPEVKVETLAVIHGDLIHQRGGMDEMEFAKAESNMNDLLSKYH
Homology
[Close]
BLAST of Spg030305 vs. NCBI nr
Match: KAG6434821.1 (hypothetical protein SASPL_106465 [Salvia splendens])

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-06
Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 0 

Query: 120 LSMGGREWNCLEVEKGNNFYDIQFNTRLVKSTIVHLEGVVSTQNFKVPKDKSLDYELHCG 179
           LS    E  C +VEKG+NFYD Q NTRLVKSTIVH +  +S     +  D  L+ E  CG
Sbjct: 100 LSREDLEKECKKVEKGHNFYDFQLNTRLVKSTIVHFQVTMSNSTLVLLYDLVLEDEFSCG 159

Query: 180 LRLSDFVPE 189
           +  S  V +
Sbjct: 160 VLYSGAVKD 168

[Close]
BLAST of Spg030305 vs. NCBI nr
Match: KAA3476686.1 (Transducin/WD40 repeat-like superfamily protein isoform 1 [Gossypium australe])

HSP 1 Score: 59.3 bits (142), Expect = 5.0e-05
Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 0 

Query: 121 SMGGREWNCLEVEKGNNFYDIQFNTRLVKSTIVHLEGVVSTQNFKVPKDKSLDYELHCGL 180
           S  G E  CL+VEKGN FYD QFNTRLVKSTIVH +   +          +L+Y LH  +
Sbjct: 103 SREGMEKECLQVEKGNAFYDFQFNTRLVKSTIVHFQLFAAFNLSSFANGLNLNY-LH--I 162

Query: 181 RLSDFVPEVKVETLAVI 198
            +S F  +  V  L ++
Sbjct: 163 AVSQFAKDALVCNLPML 176

[Close]
BLAST of Spg030305 vs. NCBI nr
Match: KAG7020205.1 (SPBC2A9.03, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 58.5 bits (140), Expect = 8.5e-05
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 126 EWNCLEVEKGNNFYDIQFNTRLVKSTIVHLEGVV 160
           E  CL+VEKGNNFYD QFNTRLVKSTIVH + V+
Sbjct: 167 EKECLQVEKGNNFYDFQFNTRLVKSTIVHFQLVI 200

[Close]
BLAST of Spg030305 vs. NCBI nr
Match: XP_013460860.1 (uncharacterized WD repeat-containing protein C2A9.03 isoform X1 [Medicago truncatula] >KEH34894.1 transducin/WD40 repeat protein [Medicago truncatula] >RHN68598.1 putative transcription factor WD40-like family [Medicago truncatula])

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-04
Identity = 41/110 (37.27%), Postives = 51/110 (46.36%), Query Frame = 0 

Query: 129 CLEVEKGNNFYDIQFNTRLVKSTIVHLE-----------GVVSTQNFKVPKDKSL----- 188
           CLEVEKGN+FYD QFNTRLVKSTI H +            V   QN+ V    SL     
Sbjct: 117 CLEVEKGNSFYDFQFNTRLVKSTIAHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLQRGK 176

Query: 189 -----------DYELHCGLRLSDFVPEVKVETLAV---------IHGDLI 203
                        + HCG  L+  V  V++ T+AV          HG+L+
Sbjct: 177 EVLNVAKPVIPTLQKHCG--LAHPVSRVQISTMAVKENLMVAGGFHGELL 224

[Close]
BLAST of Spg030305 vs. NCBI nr
Match: XP_022951510.1 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-04
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 126 EWNCLEVEKGNNFYDIQFNTRLVKSTIVHLE 157
           E  CL+VEKGNNFYD QFNTRLVKSTIVH +
Sbjct: 99  EKECLQVEKGNNFYDFQFNTRLVKSTIVHFQ 129

[Close]
BLAST of Spg030305 vs. ExPASy TrEMBL
Match: A0A5B6W5K1 (Transducin/WD40 repeat-like superfamily protein isoform 1 OS=Gossypium australe OX=47621 GN=EPI10_010645 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-05
Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 0 

Query: 121 SMGGREWNCLEVEKGNNFYDIQFNTRLVKSTIVHLEGVVSTQNFKVPKDKSLDYELHCGL 180
           S  G E  CL+VEKGN FYD QFNTRLVKSTIVH +   +          +L+Y LH  +
Sbjct: 103 SREGMEKECLQVEKGNAFYDFQFNTRLVKSTIVHFQLFAAFNLSSFANGLNLNY-LH--I 162

Query: 181 RLSDFVPEVKVETLAVI 198
            +S F  +  V  L ++
Sbjct: 163 AVSQFAKDALVCNLPML 176

[Close]
BLAST of Spg030305 vs. ExPASy TrEMBL
Match: A0A072UYQ2 (Putative transcription factor WD40-like family OS=Medicago truncatula OX=3880 GN=25489425 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.4e-05
Identity = 41/110 (37.27%), Postives = 51/110 (46.36%), Query Frame = 0 

Query: 129 CLEVEKGNNFYDIQFNTRLVKSTIVHLE-----------GVVSTQNFKVPKDKSL----- 188
           CLEVEKGN+FYD QFNTRLVKSTI H +            V   QN+ V    SL     
Sbjct: 117 CLEVEKGNSFYDFQFNTRLVKSTIAHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLQRGK 176

Query: 189 -----------DYELHCGLRLSDFVPEVKVETLAV---------IHGDLI 203
                        + HCG  L+  V  V++ T+AV          HG+L+
Sbjct: 177 EVLNVAKPVIPTLQKHCG--LAHPVSRVQISTMAVKENLMVAGGFHGELL 224

[Close]
BLAST of Spg030305 vs. ExPASy TrEMBL
Match: A0A6J1KNX6 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495944 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.1e-05
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 126 EWNCLEVEKGNNFYDIQFNTRLVKSTIVHLE 157
           E  CL+VEKGNNFYD QFNTRLVKSTIVH +
Sbjct: 99  EKECLQVEKGNNFYDFQFNTRLVKSTIVHFQ 129

[Close]
BLAST of Spg030305 vs. ExPASy TrEMBL
Match: A0A6J1GIZ9 (uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454306 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.1e-05
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 126 EWNCLEVEKGNNFYDIQFNTRLVKSTIVHLE 157
           E  CL+VEKGNNFYD QFNTRLVKSTIVH +
Sbjct: 99  EKECLQVEKGNNFYDFQFNTRLVKSTIVHFQ 129

[Close]
BLAST of Spg030305 vs. ExPASy TrEMBL
Match: A0A1U8NMZ6 (uncharacterized WD repeat-containing protein C2A9.03-like OS=Gossypium hirsutum OX=3635 GN=LOC107949204 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 0 

Query: 121 SMGGREWNCLEVEKGNNFYDIQFNTRLVKSTIVHLE 157
           S  G E  CL+VEKGN FYD QFNTRLVKSTIVH +
Sbjct: 103 SREGMEKECLQVEKGNAFYDFQFNTRLVKSTIVHFQ 138

[Close]
BLAST of Spg030305 vs. TAIR 10
Match: AT1G78070.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 4.3e-07
Identity = 22/28 (78.57%), Postives = 24/28 (85.71%), Query Frame = 0 

Query: 129 CLEVEKGNNFYDIQFNTRLVKSTIVHLE 157
           CL+VEKG NFYD QFNTRLVKSTI H +
Sbjct: 108 CLQVEKGKNFYDFQFNTRLVKSTIAHFQ 135

[Close]
BLAST of Spg030305 vs. TAIR 10
Match: AT1G36070.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 5.3e-05
Identity = 20/25 (80.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 132 VEKGNNFYDIQFNTRLVKSTIVHLE 157
           VEKG NFYD QFNTRLV STIVH +
Sbjct: 80  VEKGKNFYDFQFNTRLVTSTIVHFQ 104

[Close]
BLAST of Spg030305 vs. TAIR 10
Match: AT1G36070.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 5.3e-05
Identity = 20/25 (80.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 132 VEKGNNFYDIQFNTRLVKSTIVHLE 157
           VEKG NFYD QFNTRLV STIVH +
Sbjct: 79  VEKGKNFYDFQFNTRLVTSTIVHFQ 103

The following BLAST results are available for this feature:
BLAST of Spg030305 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6434821.14.5e-0646.38hypothetical protein SASPL_106465 [Salvia splendens][more]
KAA3476686.15.0e-0544.16Transducin/WD40 repeat-like superfamily protein isoform 1 [Gossypium australe][more]
KAG7020205.18.5e-0576.47SPBC2A9.03, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_013460860.11.1e-0437.27uncharacterized WD repeat-containing protein C2A9.03 isoform X1 [Medicago trunca... [more]
XP_022951510.11.9e-0480.65uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Cucurbita ... [more]
BLAST of Spg030305 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg030305 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5B6W5K12.4e-0544.16Transducin/WD40 repeat-like superfamily protein isoform 1 OS=Gossypium australe ... [more]
A0A072UYQ25.4e-0537.27Putative transcription factor WD40-like family OS=Medicago truncatula OX=3880 GN... [more]
A0A6J1KNX69.1e-0580.65uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 OS=Cucurbit... [more]
A0A6J1GIZ99.1e-0580.65uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 OS=Cucurbit... [more]
A0A1U8NMZ61.2e-0472.22uncharacterized WD repeat-containing protein C2A9.03-like OS=Gossypium hirsutum ... [more]
BLAST of Spg030305 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G78070.14.3e-0778.57Transducin/WD40 repeat-like superfamily protein [more]
AT1G36070.15.3e-0580.00Transducin/WD40 repeat-like superfamily protein [more]
AT1G36070.25.3e-0580.00Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023123Tubulin, C-terminalGENE3D1.10.287.600Helix hairpin bincoord: 195..228
e-value: 3.1E-7
score: 32.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030305.1Spg030305.1mRNA