Spg030283 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030283
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	scaffold6: 15037695 .. 15040408 (-)
RNA-Seq Expression	Spg030283
Synteny	Spg030283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGCAGAGGAGGAAGAATGTGAGGATGTGGGTGACGGCGACCATGGGCAGAGGTGGAAGAGAGGAGGATTTGGGTGCAGCATTGCAGTGGGGTTGGATTATATGGAAAATGAGGGGGAAGGACAAGGATGACAACAATGGATGAAGAAAAGTCATGGTGTTGAAGGCATGGTTGGAAATTGTAAAATTTTAATGGTGGATCAGTTCAGTGCACAGTAAGCAAACAGACAAATGAAGGATAATGAAGGGAGAAAACAAATCGTTGTGTATCGTATGAAGTTGCTGTGACTTGATTTTGAATCTCTAAGGCACTGGTGGGTTTTAGAGATAGCCAAATTTTGTAGAAATGATGAGAGAGAGAGGAAAAAAAAAAAAGTCACCGGCGACGGCCGACCGTCAGCGAGCGGTGGTTGCCGGCCACCAGCGACTTGCTGTTGAAGAAGAAGGTTGCTGATGAAGAAGAAAGAGAGGTAGAAAGAGAGGGAGAAAGAATTTAAAAAATAATAAAATAATAATATTTTTATTTTTTTAATATATTTATATTTTAAAAAATTTTAAAATAATTTTTTTAATAAAAAAAATAGTGTCACGTCATCAAACCGTTAATTATTAATGGAAAAATGGATGGAGAGACTAAAATGAAACTAAAATCAAACCTTAGGGACTAAATTGTTGAGTTTGAAAACTTAGGGATCAAAATGAAACCTAATTTAAACCTCAGGGACTAAAAGTGTATTTTTCCCAAAATTAATTAATGCATAAGCTTACAATTGATATAATTAAAAGATTTGGACATACTTGAAATTAATGGGTTAAAGGAGCCCATCCACTATAACTTCGGTGAGAAAAATTCTCAATATTTTTTTAATAAAAAATTAATTAAATCTCAGCGAGTATATAAAAAGTAAAAATTTGGGCTGAAAAGTAGAGAATGTTATTATTTTAAAATGATTTATTATTTGATAATTTTATAAAAATATTGACATTTTGGGTAATAAAACTAATAATTAACACTAATTTGAAGATAAAACTAAAATTAATAGAATTTTAAATTTCTTCGCTTGTCAATTCAAGCATAGTTCCGTAAATAAAAAATTGTCATTATTAAACTAAAAAAAAAATAAAAATTGTCCACCGAAACCATAGTGGACTTAATTTTGTTATATATATAATTGTGTTGGATGGAAAAAGAAAATTGTTAAAAGAAAAAAAAAAAAAAAAGAAATGGAGGAGAAGGAATAGATAAAATGTGGATAGAAAGAGATGAGTAGTAGATACATAAAAATCTTTAGAAGAGCTGTGATTGGCTGACTAAAGCCTCTCATTACCCCACAAAATTTCTCAATCTTCCATTCTTCACCACCCATCTCCCCAATTTTCTCATAATATTCCCTCACTTTCCCCTGTCTCTCACACTTGCAGCTGCAGCGCCCCTTCATTTCTCTCTGCTCCTCACAGCTTTCCCCCAACTCAGAAGAGAGCTCCACTATCATGTCAATGGCCGCCACCTCCACCACCCTCCTCCGCCCGACCCCCTTTCTCGGCCAGACCAGAGGCGCCTCTTCCCAGAACCCCCTCAGAGATGTCGTCGCCATGGGAACTGGAAAATACACCATGGTCTCTCTCTCTTTCTTTCTCTGTTGCCAGCTTTTGTTTTTTCGCTCTATGTTGAAGTGAAGACTGATGGTGTTTTTAATTGTGAACAGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGCCCCTTTTCAGCTCAGACTCCCTCCTACTTGAACGGCGAGTTCCCCGGCGATTATGGATGGGACACTGCCGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTAGTTTCCATTTTCCAACCCAATTTTTCATTTTAAAATTCAATTCGATGCCTAAATTACGGACTTGCAGGTGATCCACGGGAGGTGGGCCATGTTGGGAGCCTTGGGGTGCATAACACCAGAGGTGCTGGAGAAATGGTTGAGAGTGGACTTCAAGGAGCCGGTCTGGTTCAAGGCCGGCGCCCAAATCTTCTCAGAAGGAGGGCTCGACTACCTGGGCAACCCGAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGTTGGGCTTCCAAGTGGTCCTAATGGGCCTGGTCGAAGGCTTCCGCATCAACGGCCTGGACGGCGTCGGCGAGGGCAACGACCTGTACCCGGGCGGCCAGTACTTCGACCCACTCGGACTGGCCGACGACCCAGTCACCTTCGCCGAGCTCAAGGTCAAGGAGATCAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGGTTCTTCGTTCAGGCCATCGTCACCGGGAAAGGCCCGCTCGAGAACCTACTCGACCATCTCGATAACCCTGTCGCCAACAATGCTTGGGTTTATGCCACCAAGTTTGCTCCCGGCTCATAAATGAGGATTTAGAAAACATGTGTGGTGGGCTTCATCCATGGAAATTGAACATCTTAATTTGTTGTGTAAATTGTTTCTAGCTTTCTCTTCTTTTTTTTGGTGTGGATGTGATTATTAGAAGGCTGAGTAATGGATCAATGGACATTAATTCCCACTTGATCGAATGAAATGTTCTTAATCTTAATGACGTGATTTCATCTAAATCTAATGACAATACCTTGAGTTATTGGTTCAGAGATCAAATAATATAATTTGCCTACT

mRNA sequence

ATGGGAAGGCAGAGGAGGAAGAATGTGAGGATGTGGGTGACGGCGACCATGGGCAGAGGTGGAAGAGAGGAGGATTTGGGTGCAGCATTGCAGTGGGCTGCAGCGCCCCTTCATTTCTCTCTGCTCCTCACAGCTTTCCCCCAACTCAGAAGAGAGCTCCACTATCATGTCAATGGCCGCCACCTCCACCACCCTCCTCCGCCCGACCCCCTTTCTCGGCCAGACCAGAGGCGCCTCTTCCCAGAACCCCCTCAGAGATGTCGTCGCCATGGGAACTGGAAAATACACCATGGTCTCTCTCTCTTTCTTTCTCTGTTGCCAGCTTTTGTTTTTTCGCTCTATGTTGAAGTGAAGACTGATGGTGTTTTTAATTGTGAACAGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGCCCCTTTTCAGCTCAGACTCCCTCCTACTTGAACGGCGAGTTCCCCGGCGATTATGGATGGGACACTGCCGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTGATCCACGGGAGGTGGGCCATGTTGGGAGCCTTGGGGTGCATAACACCAGAGGTGCTGGAGAAATGGTTGAGAGTGGACTTCAAGGAGCCGGTCTGGTTCAAGGCCGGCGCCCAAATCTTCTCAGAAGGAGGGCTCGACTACCTGGGCAACCCGAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGTTGGGCTTCCAAGTGGTCCTAATGGGCCTGGTCGAAGGCTTCCGCATCAACGGCCTGGACGGCGTCGGCGAGGGCAACGACCTGTACCCGGGCGGCCAGTACTTCGACCCACTCGGACTGGCCGACGACCCAGTCACCTTCGCCGAGCTCAAGGTCAAGGAGATCAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGGTTCTTCGTTCAGGCCATCGTCACCGGGAAAGGCCCGCTCGAGAACCTACTCGACCATCTCGATAACCCTGTCGCCAACAATGCTTGGGTTTATGCCACCAAGTTTGCTCCCGGCTCATAA

Coding sequence (CDS)

ATGGGAAGGCAGAGGAGGAAGAATGTGAGGATGTGGGTGACGGCGACCATGGGCAGAGGTGGAAGAGAGGAGGATTTGGGTGCAGCATTGCAGTGGGCTGCAGCGCCCCTTCATTTCTCTCTGCTCCTCACAGCTTTCCCCCAACTCAGAAGAGAGCTCCACTATCATGTCAATGGCCGCCACCTCCACCACCCTCCTCCGCCCGACCCCCTTTCTCGGCCAGACCAGAGGCGCCTCTTCCCAGAACCCCCTCAGAGATGTCGTCGCCATGGGAACTGGAAAATACACCATGGTCTCTCTCTCTTTCTTTCTCTGTTGCCAGCTTTTGTTTTTTCGCTCTATGTTGAAGTGAAGACTGATGGTGTTTTTAATTGTGAACAGGGAAATGATCTGTGGTATGGACCAGACAGAGTGAAGTACTTGGGCCCCTTTTCAGCTCAGACTCCCTCCTACTTGAACGGCGAGTTCCCCGGCGATTATGGATGGGACACTGCCGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTGATCCACGGGAGGTGGGCCATGTTGGGAGCCTTGGGGTGCATAACACCAGAGGTGCTGGAGAAATGGTTGAGAGTGGACTTCAAGGAGCCGGTCTGGTTCAAGGCCGGCGCCCAAATCTTCTCAGAAGGAGGGCTCGACTACCTGGGCAACCCGAACCTGGTCCACGCCCAGAGCATCCTGGCCGTGTTGGGCTTCCAAGTGGTCCTAATGGGCCTGGTCGAAGGCTTCCGCATCAACGGCCTGGACGGCGTCGGCGAGGGCAACGACCTGTACCCGGGCGGCCAGTACTTCGACCCACTCGGACTGGCCGACGACCCAGTCACCTTCGCCGAGCTCAAGGTCAAGGAGATCAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGGTTCTTCGTTCAGGCCATCGTCACCGGGAAAGGCCCGCTCGAGAACCTACTCGACCATCTCGATAACCCTGTCGCCAACAATGCTTGGGTTTATGCCACCAAGTTTGCTCCCGGCTCATAA

Protein sequence

MGRQRRKNVRMWVTATMGRGGREEDLGAALQWAAAPLHFSLLLTAFPQLRRELHYHVNGRHLHHPPPPDPLSRPDQRRLFPEPPQRCRRHGNWKIHHGLSLFLSLLPAFVFSLYVEVKTDGVFNCEQGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Homology

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BLAST of Spg030283 vs. NCBI nr
Match: NP_001241200.1 (Chlorophyll a-b binding protein 3, chloroplastic-like [Glycine max] >XP_028190666.1 chlorophyll a-b binding protein 3, chloroplastic-like [Glycine soja] >ACU18020.1 unknown [Glycine max] >KAG4960846.1 hypothetical protein JHK87_037479 [Glycine soja] >KAG4971854.1 hypothetical protein JHK85_038275 [Glycine max] >KAG4978250.1 hypothetical protein JHK86_037724 [Glycine max] >KAG5114256.1 hypothetical protein JHK82_037525 [Glycine max])

HSP 1 Score: 474.9 bits (1221), Expect = 5.8e-130
Identity = 222/235 (94.47%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 116 EVKTDGVFNCEQGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA 175
           +V + G      GNDLWYGPDRVKYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFA
Sbjct: 33  DVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFA 92

Query: 176 KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL 235
           KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL
Sbjct: 93  KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL 152

Query: 236 VHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK 295
           VHAQSILAVLGFQV+LMGLVEG+RINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK
Sbjct: 153 VHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK 212

Query: 296 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 213 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 267

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BLAST of Spg030283 vs. NCBI nr
Match: XP_008452292.1 (PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo] >KAA0046876.1 chlorophyll a-b binding protein 13 [Cucumis melo var. makuwa] >TYK03270.1 chlorophyll a-b binding protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 474.2 bits (1219), Expect = 9.9e-130
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 128 GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 187
           GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
Sbjct: 42  GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 101

Query: 188 AMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF 247
           AMLGALGCITPEVLEKWL+VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGF
Sbjct: 102 AMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGF 161

Query: 248 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 307
           QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF
Sbjct: 162 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 221

Query: 308 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 222 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264

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BLAST of Spg030283 vs. NCBI nr
Match: XP_023553506.1 (chlorophyll a-b binding protein 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-129
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 128 GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 187
           GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
Sbjct: 44  GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 103

Query: 188 AMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF 247
           AMLGA GCITPEVLEKWL+VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF
Sbjct: 104 AMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF 163

Query: 248 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 307
           QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF
Sbjct: 164 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 223

Query: 308 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 224 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 266

[Close]

BLAST of Spg030283 vs. NCBI nr
Match: KAG6577394.1 (Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-129
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 128 GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 187
           GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
Sbjct: 42  GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 101

Query: 188 AMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF 247
           AMLGA GCITPEVLEKWL+VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF
Sbjct: 102 AMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF 161

Query: 248 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 307
           QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF
Sbjct: 162 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 221

Query: 308 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 222 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of Spg030283 vs. NCBI nr
Match: XP_008366442.1 (chlorophyll a-b binding protein 13, chloroplastic [Malus domestica] >RXI03679.1 hypothetical protein DVH24_004331 [Malus domestica])

HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-129
Identity = 222/240 (92.50%), Postives = 227/240 (94.58%), Query Frame = 0


Query: 111 FSLYVEVKTDGVFNCEQGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSAD 170
           F+   +V   G      GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSAD
Sbjct: 25  FNTLKDVVPMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSAD 84

Query: 171 PEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYL 230
           PEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW+RVDFKEPVWFKAGAQIFSEGGLDYL
Sbjct: 85  PEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYL 144

Query: 231 GNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVT 290
           GNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGN+LYPGGQYFDPLGLADDPVT
Sbjct: 145 GNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPVT 204

Query: 291 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 350
           FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKF PGS
Sbjct: 205 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 264

[Close]

BLAST of Spg030283 vs. ExPASy Swiss-Prot
Match: Q9S7M0 (Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB3 PE=1 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 3.5e-130
Identity = 219/249 (87.95%), Postives = 228/249 (91.57%), Query Frame = 0


Query: 102 FLSLLPAFVFSLYVEVKTDGVFNCEQGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYG 161
           FL    A  F+   +V + G      GNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYG
Sbjct: 17  FLGQTKASSFNPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYG 76

Query: 162 WDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQI 221
           WDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL+KW+RVDFKEPVWFKAG+QI
Sbjct: 77  WDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQI 136

Query: 222 FSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDP 281
           FSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDP
Sbjct: 137 FSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLYPGGQYFDP 196

Query: 282 LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWV 341
           LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW 
Sbjct: 197 LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWA 256

Query: 342 YATKFAPGS 351
           +ATKFAPG+
Sbjct: 257 FATKFAPGA 265

[Close]

BLAST of Spg030283 vs. ExPASy Swiss-Prot
Match: P27489 (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB13 PE=1 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.5e-128
Identity = 213/222 (95.95%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 129 NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 188
           NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA
Sbjct: 44  NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 103

Query: 189 MLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 248
           MLGALGCI PEVLEKW++VDFKEPVWFKAG+QIFS+GGLDYLGNPNLVHAQSILAVLGFQ
Sbjct: 104 MLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQ 163

Query: 249 VVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFS 308
           VVLMGLVEGFRINGL GVGEGNDLYPGGQYFDPLGLADDP TFAELKVKEIKNGRLAMFS
Sbjct: 164 VVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFS 223

Query: 309 MFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           MFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKF PG+
Sbjct: 224 MFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGA 265

[Close]

BLAST of Spg030283 vs. ExPASy Swiss-Prot
Match: P27523 (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare OX=4513 GN=LHBC PE=2 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 7.4e-128
Identity = 211/223 (94.62%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 128 GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 187
           GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEVIHGRW
Sbjct: 46  GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRW 105

Query: 188 AMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF 247
           AMLGALGC+ PEVL+KW+ V+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGF
Sbjct: 106 AMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGF 165

Query: 248 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 307
           QV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF
Sbjct: 166 QVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225

Query: 308 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           SMFGFFVQAIVTGKGPLENL DHLD+PVANNAWV+ATKFAPGS
Sbjct: 226 SMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPGS 268

[Close]

BLAST of Spg030283 vs. ExPASy Swiss-Prot
Match: A2XJ35 (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_012078 PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 3.2e-99
Identity = 175/220 (79.55%), Postives = 188/220 (85.45%), Query Frame = 0


Query: 131 LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAML 190
           +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAML
Sbjct: 46  IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAML 105

Query: 191 GALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVV 250
           GALGC+ PE+L K   V F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+   QVV
Sbjct: 106 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVV 165

Query: 251 LMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSM 310
           LMG VEG+R+ G   +GEG D +YPGG  FDPLGLADDP TFAELKVKE+KNGRLAMFSM
Sbjct: 166 LMGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRLAMFSM 225

Query: 311 FGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG 350
           FGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 226 FGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 262

[Close]

BLAST of Spg030283 vs. ExPASy Swiss-Prot
Match: Q10HD0 (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RCABP89 PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 3.2e-99
Identity = 175/220 (79.55%), Postives = 188/220 (85.45%), Query Frame = 0


Query: 131 LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAML 190
           +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAML
Sbjct: 46  IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAML 105

Query: 191 GALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVV 250
           GALGC+ PE+L K   V F E VWFKAGAQIFSEGGLDYLGNPNLVHAQSILA+   QVV
Sbjct: 106 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVV 165

Query: 251 LMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSM 310
           LMG VEG+R+ G   +GEG D +YPGG  FDPLGLADDP TFAELKVKE+KNGRLAMFSM
Sbjct: 166 LMGFVEGYRVGG-GPLGEGLDKVYPGGA-FDPLGLADDPDTFAELKVKELKNGRLAMFSM 225

Query: 311 FGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG 350
           FGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 226 FGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPG 262

[Close]

BLAST of Spg030283 vs. ExPASy TrEMBL
Match: C6T868 (Chlorophyll a-b binding protein, chloroplastic OS=Glycine max OX=3847 GN=100790960 PE=2 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.8e-130
Identity = 222/235 (94.47%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 116 EVKTDGVFNCEQGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA 175
           +V + G      GNDLWYGPDRVKYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFA
Sbjct: 33  DVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFA 92

Query: 176 KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL 235
           KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL
Sbjct: 93  KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL 152

Query: 236 VHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK 295
           VHAQSILAVLGFQV+LMGLVEG+RINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK
Sbjct: 153 VHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK 212

Query: 296 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 213 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 267

[Close]

BLAST of Spg030283 vs. ExPASy TrEMBL
Match: A0A445IBE5 (Chlorophyll a-b binding protein, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_032033 PE=3 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.8e-130
Identity = 222/235 (94.47%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 116 EVKTDGVFNCEQGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA 175
           +V + G      GNDLWYGPDRVKYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFA
Sbjct: 33  DVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFA 92

Query: 176 KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL 235
           KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL
Sbjct: 93  KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL 152

Query: 236 VHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK 295
           VHAQSILAVLGFQV+LMGLVEG+RINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK
Sbjct: 153 VHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK 212

Query: 296 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 213 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 267

[Close]

BLAST of Spg030283 vs. ExPASy TrEMBL
Match: A0A5A7TY25 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00970 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 4.8e-130
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 128 GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 187
           GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
Sbjct: 42  GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 101

Query: 188 AMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF 247
           AMLGALGCITPEVLEKWL+VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGF
Sbjct: 102 AMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGF 161

Query: 248 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 307
           QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF
Sbjct: 162 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 221

Query: 308 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 222 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of Spg030283 vs. ExPASy TrEMBL
Match: A0A1S3BUM8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493363 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 4.8e-130
Identity = 221/223 (99.10%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 128 GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 187
           GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
Sbjct: 42  GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 101

Query: 188 AMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGF 247
           AMLGALGCITPEVLEKWL+VDFKEPVWFKAGAQIF+EGGLDYLGNPNLVHAQSILAVLGF
Sbjct: 102 AMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFTEGGLDYLGNPNLVHAQSILAVLGF 161

Query: 248 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 307
           QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF
Sbjct: 162 QVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 221

Query: 308 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Sbjct: 222 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264

[Close]

BLAST of Spg030283 vs. ExPASy TrEMBL
Match: C6TKW2 (Chlorophyll a-b binding protein, chloroplastic OS=Glycine max OX=3847 GN=100779387 PE=2 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 6.3e-130
Identity = 221/235 (94.04%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 116 EVKTDGVFNCEQGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA 175
           +V + G      GNDLWYGPDRVKYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFA
Sbjct: 34  DVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFA 93

Query: 176 KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL 235
           KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL
Sbjct: 94  KNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNL 153

Query: 236 VHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK 295
           VHAQSILAVLGFQV+LMGLVEG+RINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK
Sbjct: 154 VHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELK 213

Query: 296 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKF+PGS
Sbjct: 214 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFSPGS 268

[Close]

BLAST of Spg030283 vs. TAIR 10
Match: AT5G54270.1 (light-harvesting chlorophyll B-binding protein 3 )

HSP 1 Score: 466.1 bits (1198), Expect = 2.5e-131
Identity = 219/249 (87.95%), Postives = 228/249 (91.57%), Query Frame = 0


Query: 102 FLSLLPAFVFSLYVEVKTDGVFNCEQGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYG 161
           FL    A  F+   +V + G      GNDLWYGPDRVKYLGPFS QTPSYL GEFPGDYG
Sbjct: 17  FLGQTKASSFNPLRDVVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYG 76

Query: 162 WDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQI 221
           WDTAGLSADPEAFAKNRALEVIHGRWAMLGA GCITPEVL+KW+RVDFKEPVWFKAG+QI
Sbjct: 77  WDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQI 136

Query: 222 FSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDP 281
           FSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDP
Sbjct: 137 FSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLYPGGQYFDP 196

Query: 282 LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWV 341
           LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW 
Sbjct: 197 LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWA 256

Query: 342 YATKFAPGS 351
           +ATKFAPG+
Sbjct: 257 FATKFAPGA 265

[Close]

BLAST of Spg030283 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 354.0 bits (907), Expect = 1.4e-97
Identity = 170/221 (76.92%), Postives = 185/221 (83.71%), Query Frame = 0


Query: 131 LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAML 190
           +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAML
Sbjct: 48  IWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 107

Query: 191 GALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVV 250
           GALGC  PE+L K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVV
Sbjct: 108 GALGCTFPEILSK-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVV 167

Query: 251 LMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSM 310
           LMG +EG+RI G   +GEG D LYPGG  FDPL LA+DP  F+ELKVKE+KNGRLAMFSM
Sbjct: 168 LMGFIEGYRIGG-GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSM 227

Query: 311 FGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 351
           FGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG+
Sbjct: 228 FGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGN 265

[Close]

BLAST of Spg030283 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 353.2 bits (905), Expect = 2.4e-97
Identity = 170/220 (77.27%), Postives = 184/220 (83.64%), Query Frame = 0


Query: 131 LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAML 190
           +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAML
Sbjct: 48  IWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 107

Query: 191 GALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVV 250
           GALGC  PE+L K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVV
Sbjct: 108 GALGCTFPEILSK-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVV 167

Query: 251 LMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSM 310
           LMG +EG+RI G   +GEG D LYPGG  FDPL LA+DP  F+ELKVKE+KNGRLAMFSM
Sbjct: 168 LMGFIEGYRIGG-GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSM 227

Query: 311 FGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG 350
           FGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG
Sbjct: 228 FGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Spg030283 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 352.8 bits (904), Expect = 3.1e-97
Identity = 169/220 (76.82%), Postives = 184/220 (83.64%), Query Frame = 0


Query: 131 LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAML 190
           +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAML
Sbjct: 49  IWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 108

Query: 191 GALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVV 250
           GALGC  PE+L K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVV
Sbjct: 109 GALGCTFPEILSK-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 168

Query: 251 LMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSM 310
           LMG +EG+RI G   +GEG D LYPGG  FDPL LA+DP  F+ELKVKE+KNGRLAMFSM
Sbjct: 169 LMGFIEGYRIGG-GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSM 228

Query: 311 FGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG 350
           FGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 229 FGFFVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPG 265

[Close]

BLAST of Spg030283 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 347.4 bits (890), Expect = 1.3e-95
Identity = 165/219 (75.34%), Postives = 183/219 (83.56%), Query Frame = 0


Query: 132 WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 191
           WYG DRVKYLGPFS ++PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 50  WYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 109

Query: 192 ALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVL 251
           ALGC+ PE+L +   V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+   QV+L
Sbjct: 110 ALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVIL 169

Query: 252 MGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMF 311
           MG VEG+R+ G   +GE  D LYPGG  FDPLGLA DP  FAELKVKE+KNGRLAMFSMF
Sbjct: 170 MGAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKNGRLAMFSMF 229

Query: 312 GFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG 350
           GFFVQAIVTGKGP+ENL DHL +PV NNAW +AT F PG
Sbjct: 230 GFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPG 266

The following BLAST results are available for this feature:

BLAST of Spg030283 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001241200.1	5.8e-130	94.47	Chlorophyll a-b binding protein 3, chloroplastic-like [Glycine max] >XP_02819066...	[more]
XP_008452292.1	9.9e-130	99.10	PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Cucumis melo] >KAA...	[more]
XP_023553506.1	1.3e-129	99.10	chlorophyll a-b binding protein 3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6577394.1	1.3e-129	99.10	Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_008366442.1	1.3e-129	92.50	chlorophyll a-b binding protein 13, chloroplastic [Malus domestica] >RXI03679.1 ...	[more]

BLAST of Spg030283 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7M0	3.5e-130	87.95	Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P27489	2.5e-128	95.95	Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P27523	7.4e-128	94.62	Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulg...	[more]
A2XJ35	3.2e-99	79.55	Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica OX=...	[more]
Q10HD0	3.2e-99	79.55	Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica O...	[more]

BLAST of Spg030283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
C6T868	2.8e-130	94.47	Chlorophyll a-b binding protein, chloroplastic OS=Glycine max OX=3847 GN=1007909...	[more]
A0A445IBE5	2.8e-130	94.47	Chlorophyll a-b binding protein, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_...	[more]
A0A5A7TY25	4.8e-130	99.10	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BUM8	4.8e-130	99.10	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
C6TKW2	6.3e-130	94.04	Chlorophyll a-b binding protein, chloroplastic OS=Glycine max OX=3847 GN=1007793...	[more]

BLAST of Spg030283 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54270.1	2.5e-131	87.95	light-harvesting chlorophyll B-binding protein 3	[more]
AT2G05100.1	1.4e-97	76.92	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	2.4e-97	77.27	photosystem II light harvesting complex gene 2.2	[more]
AT3G27690.1	3.1e-97	76.82	photosystem II light harvesting complex gene 2.3	[more]
AT1G29910.1	1.3e-95	75.34	chlorophyll A/B binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 139..343 e-value: 2.7E-91 score: 306.9
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 149..316 e-value: 2.5E-49 score: 167.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..85
None	No IPR available	PANTHER	PTHR21649:SF129	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 124..350
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 131..347
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 124..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030283.1	Spg030283.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0009769	photosynthesis, light harvesting in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0010119	regulation of stomatal movement
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009635	response to herbicide
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009517	PSII associated light-harvesting complex II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0019904	protein domain specific binding