Spg030199 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030199
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold6: 14825552 .. 14827370 (+)
RNA-Seq Expression	Spg030199
Synteny	Spg030199

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGCACATTCTTATCAGTGTCAGGTGGCTTCTAGTACGGGTCAGCCTTTGCCGCCACCTTTACCACTGTACGAGTCACCTGAGGACGAGGACGAGTGATGCTCTGCCACCTTCTTTTTGTACACGGTTGTTTCTTTCCCCCTCTTTCTTATTTTTCATTGTATTTGTTCTCATATTTGTCTGTATCTCTTATTTATTTTACATTGAGGACAATGTAATTTTAAGTTTGGGGGTGGAAAGTATTTGTTTTTGTGTTGGTCTGTAATTAATTGTTATATTTTCTTTGACCATATCTGGGCTATGTGATTGATTATGATGATTATCTTGATTTTATCATTGTGGATCAAATTTTTTAGTTTCATTTAGACCTGGGTTGAAAGTGATTTCTGTCTGAGTTGTTTTTCTTTGAGGGTGTTGTTATGATTATGACAGCCGATGAGGATACTTAATTTCAGAAAGCAGGTAAGTTATTTGTGCAATAATAATTAAAGACAGGATTCAAGATAGTTTGATTTTATTTCATGAGTCTTTTGCACCACTTGAGCACGTAGTCTCCTGTCTTAGTTTGGCAAGCTTAGAATAGGGTTATGTGATCTAGGCCTTGTTGTCACCTCGAAAGGTTTAGGGACTGGTTTGATGGTTAATCTGCATGATAGTTAGTAATGTTACACTTAGGAGAAAATTATGCCATATCTTGCTTGTTAGTGAAAAAAAAATGATTGAATGAAAAGAAAAGAAAAAAATGATGAGCTGAGTAAAGGAAAATTGAATTAAGGTCAAAAAGAGCTACCCCTGTTGTGATCAGTTAGGCCAACCAGAGAAAACTCAAGTTAAGGGTCCCTGCAATAGGAGTGTGAAAGCTACTGACCACCATTAATGATGATTGTGAAAAAGCTCAAAGTTTGGGGGTTATGTACCCCATTTAGGCACCCTAGTGGCATATTACCATCTTGAGTGTGGAGAGGTTTGATGATTGGAACTTAGGACCAGAGTAGGGGGAAAACGAGCGAAGGGTTGCATAAAACTGTTCCGGGCTTAAAGGATTGAGATAGGGAGGACTAGTCACACACACACGTGAGAGAGGAATGAAATAAATGAGGCTTATCTTGATGAATGTGTTTAATCATTAATGTTTCAGTGTGATTTATCTGTGATTTGAGATTCCTGAGGCAAGAGTCATTAGCAATGCCCCCTCAATTATTTTTATGACAGATTATTTTGATTCTTACTTTGCTCGGGACTAGCAAATGCTTAAGTTTGGGGGTATTTGATAGCGCAATTTATTAAGCTATATTTTATGTTATTTTAGTGTTAGTCTCGAGTATTATTTGGCCACTTTTATGTCTATTTGGTTTAATTTTGTAGGAATCAGATATTTCGATGGAGATTGAAGTTTCGGTGAATTAGTAGCAAAAGAATGAATTTTATTGAAGAAATTTACAAAAGAGCATAAGGTTCAAGGCATCTATATAATAGGGCAGCGTTGAGACGCTACCATTGGAGAGTCTCAACGCTCGCCGCAGGAATCAGGAGGCGCGCAAACGAGGCAGCGTCTCGATGCTACCTCCACAGCGTCTCGACGCTGTGAGTATTCCGGAAATAAATTAGGGCATATTGACACAGCGTCGCGACGCTGTCGCGTAGGAAGTTCAGTATTTATACTTTGTGATGCCATATGATTTGGGGAGCTGTTTTGGAGAGAAACACGACTTTAGAGAGGGAAAAACGACCAGAACAGGGCAGAACCAAAGGGAGCTTGATTTTGGGAGCTTGGATCGGGAGGCTCGTGACGGGAACGCACGGGAATCACGGCTAG

mRNA sequence

ATGTATGCACATTCTTATCAGTGTCAGGTGGCTTCTAGTACGGGTCAGCCTTTGCCGCCACCTTTACCACTCGTTGAGACGCTACCATTGGAGAGTCTCAACGCTCGCCGCAGGAATCAGGAGGCGCGCAAACGAGGCAGCGTCTCGATGCTACCTCCACAGCGTCTCGACGCTAGAAACACGACTTTAGAGAGGGAAAAACGACCAGAACAGGGCAGAACCAAAGGGAGCTTGATTTTGGGAGCTTGGATCGGGAGGCTCGTGACGGGAACGCACGGGAATCACGGCTAG

Coding sequence (CDS)

ATGTATGCACATTCTTATCAGTGTCAGGTGGCTTCTAGTACGGGTCAGCCTTTGCCGCCACCTTTACCACTCGTTGAGACGCTACCATTGGAGAGTCTCAACGCTCGCCGCAGGAATCAGGAGGCGCGCAAACGAGGCAGCGTCTCGATGCTACCTCCACAGCGTCTCGACGCTAGAAACACGACTTTAGAGAGGGAAAAACGACCAGAACAGGGCAGAACCAAAGGGAGCTTGATTTTGGGAGCTTGGATCGGGAGGCTCGTGACGGGAACGCACGGGAATCACGGCTAG

Protein sequence

MYAHSYQCQVASSTGQPLPPPLPLVETLPLESLNARRRNQEARKRGSVSMLPPQRLDARNTTLEREKRPEQGRTKGSLILGAWIGRLVTGTHGNHG

Homology

The following BLAST results are available for this feature:

BLAST of Spg030199 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030199 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030199 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030199 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030199.1	Spg030199.1	mRNA