Spg030174 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030174
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncoiled-coil domain-containing protein SCD2
Locationscaffold6: 14051033 .. 14054943 (-)
RNA-Seq ExpressionSpg030174
SyntenySpg030174
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTAACGTTACGGAAAGGAAACTTCTTCTCTCACTTTCTCTAACCCTAAATCGAACCCTAAATCGATCTTCTTCTCCCTCGTAGGATCTGGACTTTCGCATTCCCTCACGTCTCCCTCTCATTTGTGTCATCTAACCTTTTGCAGTTTCCCTTTCATCTCCTATTTCAATCGATTTTGGCTTCTACTTTTCTTTACTTCTCCACTATTCTTTTCTTGTCAAATTTTTCATGTCGTCAACAACAACTCATTTGGATCCCATTGCATTCTCATTTGGATCCCATTGCAATCTCATTTGGTTCCCTCTCATCTCTGTTTCATGTTTGCCCTGAAGTTCGACAACTCTTCAAAAGTCGTATGATATCGCTACTGTTTGATCCTCTTCGTCTTCACACTCCACAACAACCATTAAGCTCACTGGAGCTATGCCGTCCATAGAGCAGAGGTATGAATAATGCATAAATAAGAAAAGAAAAACTAAAAAGGGTAAAAACAATGGTTTCTTTTCTTTTTTTTGGAAGTTTTGAATTTGTTCTTGTTTAGTAGGAACAGAGGGAGATGATGAAGAAGAGAGTTTACTGACGCCATTATCATTTAGGTCAGATCATTCAACGATACAATATTGTTATTTTTTTTTCTCTAACTTATGTTTGTAGCTTTTGTTTTTTTTTCCTCTTTGTTTTTGTTTCTTTCATCGCTTTTCATCTCTTTTGTGTTTCAGCGGTGGAGGGCTTTTTTTTATCTATGAAGGAAGTTCATCCTTGATTGTGGGAAAAGTTTTTTGAAGTTTAATGGTCTGTTTTGGGATTCTTTATTTTCATAGCGGAGATCCTCAACCTTGTATAATATAGTATTGTGGAGTTCTTATTTGCAAGATATTTTGAAGCAAACAATTTATCATTTAATTTGGTTTTAAGATTCACTTGAGATCACGTTTTTTAAACAAATTTAGATTGAACAGTTTATTATTATCAATTTTTTCTTTTCAAAGTCTCTCCACTAATTTATCAAGAGATACTGAATATTATTGAACTTATTTCATGTGTTGAAATGGTTGAGTATAACATGTGGAGACCAAATGCTTGTGAAAGTTGTACAATTAGAGAAATCACATACATTTTTTTTTTGTTTGAAGTTGGCTAATCGACACCATTCTTGGCATGCATTGTGAAGGTTTTTGTTGTGATGCATTAGTGGGGGAGTGATTATTGCTTGGTACCTTTTCCTATATTGGTCGGATCAAATTAGGGCGTTGGTGAAAATGAGCATCACTTTTAATTGGGGAAGCCCTAAGAGGAAGCCAATCAACTCCTTGCTGGTTAGTTGAAGAAATCTCATTCTATTTGCTTCTTTTAATTTTAATTTGTTTAGTTAGCTATAAGTGTTCGAAAATATTGGTCCATATGTTCCTTCATTTAGCTATGGAAGTAAATCACAGTGCGCTTCAATAGAGAAGACTGTTGTAATTTAAAAGTCAGTAGATTCCATTATAATATACAGTTCAATATCTGGTTTGGAAATCAGATGAACTATTAAGCATGACTGAATGTATCTTGAGACGTTTGTCGGGTAGTTCTTTTTTTAATTTTTGTGTAGCTAGCCAGTTCATTGAAAATTAACTTTGCAGGCTGCAGTTTGGATTTGTTGCTAGCACATCCCTTTCTTCAACAGTTTACTGACCAATATTTATTATTTTTGTATCAATACTTTCTTAGGTTGCTACTCTTGGAGAGGGTGTTTCATTAGAAGCTAAATTATTAAGCAGGTATGTTTGCATCCTGTTGCACTTGCCATTTCTTTATGAGAATTTCCAGATCTTATTGTTTCACATTATTTATTTGCAGGAAAGAAGCAGCCTTGCGTCGAAGAGAGGTTTGTTGAGATTGTAACTGGATGAAGCATGTAGAATAGGTTTTAAAGGGTCATGTCATTTGTATTTTTAGGGCTTTAATCCTTCTAGGAAATAGGCCAAGTTGACATTTGCAACATTTTAAGCACTTTTTTTGTCATTGGTTTTGTCTTTTGTCTTTCAGTTTTTGTTTTTTAATCCTGACTATTATTCTTTATAAAGGTTGCACTCAAGGTTGCAAAACCAACCAAGGATAGTAGAGACGAAGAAATCGCTTCCCTTCGTTCAGAAATGGAGGTAAAAGTCACTATCTCTATTTACATAAACATTACTAGTTGAGTGTTTTCAATTTGTGTCTTGGCTTCAGATGTATGATGTTGTAATTATTTTATCAGAACTTAAAAGAGCAGCTACAGAACAACTCCGAGAAGTAAAGTTTGAAGCAAAGGCTCTTCATGTAATGACACAGAGAATGATTTGACACAAGAAGATATGGTTAGTGTTTAGATCTAGAACCAATATCTACATTCAGCTGTAAAGTTCTCTTCCAGTCACATTTTATTTTTGCTTTTTCCAGGAGGAGGTTGTGTTGAAGAGGTGTTGGCTTGCTCGCTACTGGGGCTTAGCAGTTCAATATGGTAAGGAACATTTTTTAGTTTATAAATGCCCCGTTACATACTTGAGTTGTGTGCTTTCTTAGAGCTTAAGTTCTTTTCTTATTGTGATGGGTTTATGGTTGGTAAAACTAAAACTTTGTATATTATGAAGCTCACAAAGACAAAGAAAATGAGAAATTCAGAAAGCACATGGTGGAGTATTAAGCTACTTTTGAAAGGTTGAGGTTGTCTCTCATAACAGTGAGAAATAAAAGTAAGACATCTTTTTGGCCAGATTTTTGGGTGGTTAATCCAGCCAATTGTTTCCTGAAAATCTTTGAAATTTCAGAAAATAAAGCCATGATCCTTCAAGATTGGCGGAAAGAAAACTCACTTTCTTAATATGTGTTGGATTTCTTTTTTTTTTTTTTTTGTGTGGAGATTTTGAGTTTTGGAGAACAAATATGGAGAAGATATTAGACTTTAAATGTTTGTCTATGTTAGCTTCTTATTACACACATCAGTGGCTGAATTCACTGCAACAAATATCACCTTTAATAGCATTTTAGGATAGCCCTTGCTACTATTTTACTACTATCCCTACTATACCTCTATTAGTACTCTCATAGTGTGACAGCAACATCAGAGCCAAAGTTCGATTAACTTCTCATGTAATTGTTCTTTATTTTCTTAAAGGTAGCTACAAGGTATTAATATAGAAAATCTTGCCCTTTTGATGGAGGTTTTTCTAAATAGTTCTTCCTAGTTCGTTGGAAAATCTATTCTCTTTGAGATCTTTGTTGACATTGATTTATTTTGGGTTGGGTTTTTTTCTTTCTTTTTTTTTTCGGGGATTTATTGTTTCTTTGTGATCTGAAGTTGTTCTTGGACGGTTCTTGAATTGAGATTTGTGTTGAAATGTTTATTGATGCTTCTTCTTCTTGGTTTTCTGCATTTTGATTCTGTTTTTTTAACGAAGGGGTGGGATTTATCATTGTCTTTTGATGGTTTGTTTTTCATTTCCCCAACCCACACACAGACAGACACACTTTAGTGATTGGTTTTGAAATGTTGGAGGGTAGAAAGCATTTGGGGGAGTTTGGGAGTATGACTTTTAGATTGAGCTAAAGGGAAGTATTTTAAAGAAACATTAAATATTTCAAAAGTGGTTTTAATTGGCTAAATAACATTCTATTACTAATTTGCAAATCATGCCAAACCAAACCCACCTTTAGGCTTTTGAAGAACGGCAGTTGGTGGAAATTTTCAGCAGCATCATTGCTACTGTCATTTTAAGTATGTCTAGTTTACCAAATGAAGTTGAACATGCTACTTTGTTTCTCTTCTTGAATTCCAATTAGATTATTCTCCTATTGTTTGCAATCCATCTAATTGTTCAGAGGAGAAAAAGATACCGAGCAATCAACATTCAATTGCTACATTCTGCTCTTGAGAATCCAGATTAG

mRNA sequence

ATGCCGTCCATAGAGCAGAGTGGGGGAGTGATTATTGCTTGGTACCTTTTCCTATATTGGTCGGATCAAATTAGGGCGTTGGTGAAAATGAGCATCACTTTTAATTGGGGAAGCCCTAAGAGGAAGCCAATCAACTCCTTGCTGGTTGCTACTCTTGGAGAGGGTGTTTCATTAGAAGCTAAATTATTAAGCAGGAAAGAAGCAGCCTTGCGTCGAAGAGAGGTTGCACTCAAGGTTGCAAAACCAACCAAGGATAGTAGAGACGAAGAAATCGCTTCCCTTCGTTCAGAAATGGAGATGTATGATGTTGTAATTATTTTATCAGAACTTAAAAGAGCAGCTACAGAACAACTCCGAGAAGTAAAGTTTGAAGCAAAGGCTCTTCATGAGGAGGTTGTGTTGAAGAGGTGTTGGCTTGCTCGCTACTGGGGCTTAGCAGTTCAATATGGTAGCTACAAGATTATTCTCCTATTGTTTGCAATCCATCTAATTGTTCAGAGGAGAAAAAGATACCGAGCAATCAACATTCAATTGCTACATTCTGCTCTTGAGAATCCAGATTAG

Coding sequence (CDS)

ATGCCGTCCATAGAGCAGAGTGGGGGAGTGATTATTGCTTGGTACCTTTTCCTATATTGGTCGGATCAAATTAGGGCGTTGGTGAAAATGAGCATCACTTTTAATTGGGGAAGCCCTAAGAGGAAGCCAATCAACTCCTTGCTGGTTGCTACTCTTGGAGAGGGTGTTTCATTAGAAGCTAAATTATTAAGCAGGAAAGAAGCAGCCTTGCGTCGAAGAGAGGTTGCACTCAAGGTTGCAAAACCAACCAAGGATAGTAGAGACGAAGAAATCGCTTCCCTTCGTTCAGAAATGGAGATGTATGATGTTGTAATTATTTTATCAGAACTTAAAAGAGCAGCTACAGAACAACTCCGAGAAGTAAAGTTTGAAGCAAAGGCTCTTCATGAGGAGGTTGTGTTGAAGAGGTGTTGGCTTGCTCGCTACTGGGGCTTAGCAGTTCAATATGGTAGCTACAAGATTATTCTCCTATTGTTTGCAATCCATCTAATTGTTCAGAGGAGAAAAAGATACCGAGCAATCAACATTCAATTGCTACATTCTGCTCTTGAGAATCCAGATTAG

Protein sequence

MPSIEQSGGVIIAWYLFLYWSDQIRALVKMSITFNWGSPKRKPINSLLVATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALHEEVVLKRCWLARYWGLAVQYGSYKIILLLFAIHLIVQRRKRYRAINIQLLHSALENPD
Homology
[Close]
BLAST of Spg030174 vs. NCBI nr
Match: XP_023001763.1 (coiled-coil domain-containing protein SCD2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-27
Identity = 80/115 (69.57%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPTKDSR+EEIA+LRSE+E       L 
Sbjct: 97  VATLGEGVSLEAKLLSRKEAALRQREAALKAAKPTKDSRNEEIAALRSEIEN------LK 156

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 157 DESSAATEQLREAESEAKALRVMTQRMILTQEEMEEVVLKRCWLARYWGLAVQYG 205

[Close]
BLAST of Spg030174 vs. NCBI nr
Match: XP_023001761.1 (coiled-coil domain-containing protein SCD2-like isoform X1 [Cucurbita maxima] >XP_023001762.1 coiled-coil domain-containing protein SCD2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-27
Identity = 80/115 (69.57%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPTKDSR+EEIA+LRSE+E       L 
Sbjct: 237 VATLGEGVSLEAKLLSRKEAALRQREAALKAAKPTKDSRNEEIAALRSEIEN------LK 296

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 297 DESSAATEQLREAESEAKALRVMTQRMILTQEEMEEVVLKRCWLARYWGLAVQYG 345

[Close]
BLAST of Spg030174 vs. NCBI nr
Match: XP_008440082.1 (PREDICTED: coiled-coil domain-containing protein SCD2 [Cucumis melo])

HSP 1 Score: 131.7 bits (330), Expect = 6.5e-27
Identity = 79/115 (68.70%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EE+A+LRSE+E       L 
Sbjct: 237 VATLGEGVSLEAKLLSRKEAALRQREAALKAAQPTKDSRNEELAALRSEIEN------LK 296

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           E   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 297 EESAAATEQLREAESEAKALRVMTQRMVLTQEEMEEVVLKRCWLARYWGLAVQYG 345

[Close]
BLAST of Spg030174 vs. NCBI nr
Match: TYJ99280.1 (coiled-coil domain-containing protein SCD2 [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 6.5e-27
Identity = 79/115 (68.70%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EE+A+LRSE+E       L 
Sbjct: 282 VATLGEGVSLEAKLLSRKEAALRQREAALKAAQPTKDSRNEELAALRSEIEN------LK 341

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           E   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 342 EESAAATEQLREAESEAKALRVMTQRMVLTQEEMEEVVLKRCWLARYWGLAVQYG 390

[Close]
BLAST of Spg030174 vs. NCBI nr
Match: XP_038894537.1 (coiled-coil domain-containing protein SCD2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-27
Identity = 79/115 (68.70%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EEIA+LRSE+E       L 
Sbjct: 97  VATLGEGVSLEAKLLSRKEAALRQREAALKAAQPTKDSRNEEIAALRSEIEN------LK 156

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 157 DESAAATEQLREAESEAKALRVMTQRMILTQEEMEEVVLKRCWLARYWGLAVQYG 205

[Close]
BLAST of Spg030174 vs. ExPASy Swiss-Prot
Match: Q8RWD5 (Coiled-coil domain-containing protein SCD2 OS=Arabidopsis thaliana OX=3702 GN=SCD2 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-24
Identity = 69/115 (60.00%), Postives = 79/115 (68.70%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VA+LGEGVSLEAKLLSRKEAALR+RE AL VAK  K  +DEEI SLRSE+E       L 
Sbjct: 256 VASLGEGVSLEAKLLSRKEAALRQREAALNVAKQKKSGKDEEIVSLRSELEN------LK 315

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +    A E+L+E + EAK+L              EEVVLKRCWLARYWGLAVQ+G
Sbjct: 316 DEATTAAERLQEAESEAKSLRTMTQRMILTQDEMEEVVLKRCWLARYWGLAVQHG 364

[Close]
BLAST of Spg030174 vs. ExPASy TrEMBL
Match: A0A6J1KJI4 (coiled-coil domain-containing protein SCD2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495807 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 80/115 (69.57%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPTKDSR+EEIA+LRSE+E       L 
Sbjct: 237 VATLGEGVSLEAKLLSRKEAALRQREAALKAAKPTKDSRNEEIAALRSEIEN------LK 296

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 297 DESSAATEQLREAESEAKALRVMTQRMILTQEEMEEVVLKRCWLARYWGLAVQYG 345

[Close]
BLAST of Spg030174 vs. ExPASy TrEMBL
Match: A0A6J1KRH4 (coiled-coil domain-containing protein SCD2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495807 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 80/115 (69.57%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPTKDSR+EEIA+LRSE+E       L 
Sbjct: 97  VATLGEGVSLEAKLLSRKEAALRQREAALKAAKPTKDSRNEEIAALRSEIEN------LK 156

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 157 DESSAATEQLREAESEAKALRVMTQRMILTQEEMEEVVLKRCWLARYWGLAVQYG 205

[Close]
BLAST of Spg030174 vs. ExPASy TrEMBL
Match: A0A5D3BHM3 (Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004930 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.1e-27
Identity = 79/115 (68.70%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EE+A+LRSE+E       L 
Sbjct: 282 VATLGEGVSLEAKLLSRKEAALRQREAALKAAQPTKDSRNEELAALRSEIEN------LK 341

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           E   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 342 EESAAATEQLREAESEAKALRVMTQRMVLTQEEMEEVVLKRCWLARYWGLAVQYG 390

[Close]
BLAST of Spg030174 vs. ExPASy TrEMBL
Match: A0A1S3B094 (coiled-coil domain-containing protein SCD2 OS=Cucumis melo OX=3656 GN=LOC103484657 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.1e-27
Identity = 79/115 (68.70%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EE+A+LRSE+E       L 
Sbjct: 237 VATLGEGVSLEAKLLSRKEAALRQREAALKAAQPTKDSRNEELAALRSEIEN------LK 296

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           E   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 297 EESAAATEQLREAESEAKALRVMTQRMVLTQEEMEEVVLKRCWLARYWGLAVQYG 345

[Close]
BLAST of Spg030174 vs. ExPASy TrEMBL
Match: A0A0A0LRN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051750 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.3e-27
Identity = 79/115 (68.70%), Postives = 86/115 (74.78%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EE+A+LRSE+E       L 
Sbjct: 239 VATLGEGVSLEAKLLSRKEAALRQREAALKAAQPTKDSRNEELAALRSEIEN------LK 298

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           E   AATEQLRE + EAKAL              EEVVLKRCWLARYWGLAVQYG
Sbjct: 299 EESVAATEQLREAESEAKALRVMTQRMVLTQEEMEEVVLKRCWLARYWGLAVQYG 347

[Close]
BLAST of Spg030174 vs. TAIR 10
Match: AT3G48860.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 3.8e-25
Identity = 69/115 (60.00%), Postives = 79/115 (68.70%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VA+LGEGVSLEAKLLSRKEAALR+RE AL VAK  K  +DEEI SLRSE+E       L 
Sbjct: 256 VASLGEGVSLEAKLLSRKEAALRQREAALNVAKQKKSGKDEEIVSLRSELEN------LK 315

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +    A E+L+E + EAK+L              EEVVLKRCWLARYWGLAVQ+G
Sbjct: 316 DEATTAAERLQEAESEAKSLRTMTQRMILTQDEMEEVVLKRCWLARYWGLAVQHG 364

[Close]
BLAST of Spg030174 vs. TAIR 10
Match: AT3G48860.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12232 Blast hits to 9546 proteins in 892 species: Archae - 172; Bacteria - 1174; Metazoa - 6487; Fungi - 1343; Plants - 856; Viruses - 50; Other Eukaryotes - 2150 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 3.8e-25
Identity = 69/115 (60.00%), Postives = 79/115 (68.70%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VA+LGEGVSLEAKLLSRKEAALR+RE AL VAK  K  +DEEI SLRSE+E       L 
Sbjct: 256 VASLGEGVSLEAKLLSRKEAALRQREAALNVAKQKKSGKDEEIVSLRSELEN------LK 315

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +    A E+L+E + EAK+L              EEVVLKRCWLARYWGLAVQ+G
Sbjct: 316 DEATTAAERLQEAESEAKSLRTMTQRMILTQDEMEEVVLKRCWLARYWGLAVQHG 364

[Close]
BLAST of Spg030174 vs. TAIR 10
Match: AT5G23700.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-24
Identity = 67/115 (58.26%), Postives = 77/115 (66.96%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VA+LGEGVSLEAKLLSRKEAALR+RE ALK A   KD + EE+ SLRSE++      IL 
Sbjct: 230 VASLGEGVSLEAKLLSRKEAALRQREAALKAANEKKDGKKEEVVSLRSEIQ------ILK 289

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +    A E L+E + EAKAL              EEV LKRCWLARYWGLAVQ+G
Sbjct: 290 DEAETAAECLQEAESEAKALRIMTQRMVLTQDEMEEVALKRCWLARYWGLAVQHG 338

[Close]
BLAST of Spg030174 vs. TAIR 10
Match: AT5G13260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 5.3e-19
Identity = 58/109 (53.21%), Postives = 75/109 (68.81%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEME--MYDVVII 108
           V +LGEGVSLEAKLLSRKEAALR+RE ALK A+  +D  + E  +LRS++E    +   I
Sbjct: 232 VTSLGEGVSLEAKLLSRKEAALRQREAALKDARQNRDGTNRETTALRSQVETAKLETAAI 291

Query: 109 LSELKRAATE--QLREVKFE---AKALHEEVVLKRCWLARYWGLAVQYG 151
           +++L+ A +E   LR +       +   EEVVLKRCWLARYWGLA +YG
Sbjct: 292 VAQLQGAESEVNGLRTMTHRMILTQKEMEEVVLKRCWLARYWGLASRYG 340

[Close]
BLAST of Spg030174 vs. TAIR 10
Match: AT4G25070.1 (unknown protein; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 14837 Blast hits to 10961 proteins in 1163 species: Archae - 189; Bacteria - 1924; Metazoa - 7665; Fungi - 1127; Plants - 653; Viruses - 80; Other Eukaryotes - 3199 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 9.0e-19
Identity = 56/115 (48.70%), Postives = 72/115 (62.61%), Query Frame = 0 

Query: 49  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILS 108
           VA+LGEG + + KLL RKEAALR+RE AL+ A+  +D R+ E  +L SE +       L 
Sbjct: 445 VASLGEGANFDVKLLKRKEAALRQREAALRAAEQKRDGRNRETNALSSEFQS------LK 504

Query: 109 ELKRAATEQLREVKFEAKALH-------------EEVVLKRCWLARYWGLAVQYG 151
           +    +TEQL+EV+ E K+L              EEVVLKRCWLARYW LAVQ+G
Sbjct: 505 DEAEKSTEQLQEVEAEIKSLRTMIHRTILSQEEMEEVVLKRCWLARYWELAVQHG 553

The following BLAST results are available for this feature:
BLAST of Spg030174 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023001763.12.9e-2769.57coiled-coil domain-containing protein SCD2-like isoform X2 [Cucurbita maxima][more]
XP_023001761.12.9e-2769.57coiled-coil domain-containing protein SCD2-like isoform X1 [Cucurbita maxima] >X... [more]
XP_008440082.16.5e-2768.70PREDICTED: coiled-coil domain-containing protein SCD2 [Cucumis melo][more]
TYJ99280.16.5e-2768.70coiled-coil domain-containing protein SCD2 [Cucumis melo var. makuwa][more]
XP_038894537.18.4e-2768.70coiled-coil domain-containing protein SCD2-like isoform X2 [Benincasa hispida][more]
BLAST of Spg030174 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RWD55.3e-2460.00Coiled-coil domain-containing protein SCD2 OS=Arabidopsis thaliana OX=3702 GN=SC... [more]
BLAST of Spg030174 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KJI41.4e-2769.57coiled-coil domain-containing protein SCD2-like isoform X1 OS=Cucurbita maxima O... [more]
A0A6J1KRH41.4e-2769.57coiled-coil domain-containing protein SCD2-like isoform X2 OS=Cucurbita maxima O... [more]
A0A5D3BHM33.1e-2768.70Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3B0943.1e-2768.70coiled-coil domain-containing protein SCD2 OS=Cucumis melo OX=3656 GN=LOC1034846... [more]
A0A0A0LRN85.3e-2768.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051750 PE=4 SV=1[more]
BLAST of Spg030174 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G48860.23.8e-2560.00unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma mem... [more]
AT3G48860.13.8e-2560.00unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma mem... [more]
AT5G23700.14.2e-2458.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G13260.15.3e-1953.21unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G25070.19.0e-1948.70unknown protein; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein ... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..131
IPR040321Coiled-coil domain-containing protein SCD2-likePANTHERPTHR31762FAS-BINDING FACTOR-LIKE PROTEINcoord: 49..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030174.1Spg030174.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000911 cytokinesis by cell plate formation