Spg030173 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030173
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold6: 14503727 .. 14505981 (+)
RNA-Seq Expression	Spg030173
Synteny	Spg030173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGGCCTCGGCCTTAGGCCGAGGCCGAGCGTTATGGTCGGCCTCGGCCTTCGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAAGAGGACCCGAACTCAATTCTCGACTCTCTTCCCTTGCTCACTAGCTCTCTCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTTCCTCTGACCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGAGGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGATGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGATCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCCAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGATCCAAGGAAGGGGAAGGAGCCAATCGAGTACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCGAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATGCTAAGACAGACCTGAGAAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCCCCCCTGGAAGACTGAGCTTCTAAACACATTAAAAGAGCTTGGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGTTGACCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCACAGAAGTTCAAGGTACCTACATTCACACCGTACGATGGCAAGAAAGACCCTGTGCAGCATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGACGTCTCGGACGCAATCAGGTGCCGTGCCTTCTTTTTCACTTTGACAGGATCAGCCAAGCATTGGTTTGAAAGGCTGAAGAGAAGATCCATCGGCTCTTTCAAGGAGTTAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACAGCGCAAGCCCCACATCAACCTCTTAACAGTCAAACAGCAACTAGGTGAGAGCTTGCGCGATTACATAACGCGTTTTAACGACGAAGCGCTGCAGGTTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCTGGTCTGGAAGACGAAAGACTGCTTAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTCGTCTCCCGGGCACAGAAGTACATGAGCGCAGAGGAGTTGCTCAAATCAAAAAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAGAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACTATAGCCGAGGCCGACCAGATCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAGAGGTACACCCCTACTTCAATCCCACAGGAGCAAATTTTGATGGAGATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGTCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACCAGAAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAATTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCAAGGCCGACCAGAGATGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA

mRNA sequence

ATGGTCGGCCTCGGCCTTAGGCCGAGGCCGAGCGTTATGGTCGGCCTCGGCCTTCGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGGGATGGAGATGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGATCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCCAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGATCCAAGGAAGGGGAAGGAGCCAATCGAGTACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCGAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATGCTAAGACAGACCTGAGAAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGTAGGAAGGACAAGAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACTATAGCCGAGGCCGACCAGATCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAGAGGTACACCCCTACTTCAATCCCACAGGAGCAAATTTTGATGGAGATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGTCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACCAGAAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAATTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCAAGGCCGACCAGAGATGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA

Coding sequence (CDS)

ATGGTCGGCCTCGGCCTTAGGCCGAGGCCGAGCGTTATGGTCGGCCTCGGCCTTCGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTTCTCTTTTGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGGGATGGAGATGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGATCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCCAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGATCCAAGGAAGGGGAAGGAGCCAATCGAGTACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCGAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATGCTAAGACAGACCTGAGAAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGTAGGAAGGACAAGAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACTATAGCCGAGGCCGACCAGATCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAGAGGTACACCCCTACTTCAATCCCACAGGAGCAAATTTTGATGGAGATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGTCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACCAGAAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAATTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCAAGGCCGACCAGAGATGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGA

Protein sequence

MVGLGLRPRPSVMVGLGLRPLARAELGHLLSVPNVASRPGFAWFVPKRLRIPKNPRSMSSIGGGVASTTPVCRFSLLQATSSPSSTNLPLVAREGQGMEMRNLDINTENSDGDRHQRRSREEGRDRPRTESPRPRSPLPSSREKQADLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPIEYTAESETRSKGKKTSSMTSKVRGLKPTDRTILRSPESSTLKGHDYTVSTPSYGHAKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARAAEAEASRKDKKQRTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR

Homology

[Close]

BLAST of Spg030173 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 103.6 bits (257), Expect = 4.4e-18
Identity = 65/163 (39.88%), Postives = 93/163 (57.06%), Query Frame = 0


Query: 277 AEAEARAAEAEARAAEAEASRKDKKQRTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFE 336
           +EA +RA    +      + R+   +RTD       D  +G     R R  Q D  +KFE
Sbjct: 338 SEALSRAQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFE 397

Query: 337 RYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE 396
           +YTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E
Sbjct: 398 KYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEE 457

Query: 397 IEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 440
           +E LIR GYLKE+  + +A Q          G+    P  EIR
Sbjct: 458 VEGLIRRGYLKEYVEEPKATQN---------GESDKSPAREIR 491

[Close]

BLAST of Spg030173 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 5.8e-18
Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 295 ASRKDKKQRTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRN 354
           + R+   +RTD+      D  +G     R R  Q D  +KFE+YTPT++P EQ+LMEI++
Sbjct: 140 SKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKD 199

Query: 355 TNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAE 414
             LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +
Sbjct: 200 QRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPK 259

Query: 415 ADQRWPRPTRDDPGKDKGGPQLEIR 440
           A Q          G+ +  P  EIR
Sbjct: 260 ATQN---------GESEKSPAREIR 275

[Close]

BLAST of Spg030173 vs. NCBI nr
Match: XP_023891919.1 (uncharacterized protein LOC112003925 [Quercus suber])

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-16
Identity = 58/147 (39.46%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 298 KDKKQRTDEGGRGRPDYSRGRPDHGRGRPDQGDYL---------KKFERYTPTSIPQEQI 357
           +D  Q  +E  R R      R D GR RP  GD           ++F  +TP + P +QI
Sbjct: 4   EDALQAREEKPRKRERQEDARQDQGRKRPRTGDRRDERRSKPPGERFTSFTPLTTPIDQI 63

Query: 358 LMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKE 417
           LM+I++   L  P KLK +P+ R + +YC FHRDHGH T +C  LK +IEALIR G L++
Sbjct: 64  LMQIKDEGALTFPGKLKGDPNRRSRDKYCCFHRDHGHDTADCYDLKQQIEALIRQGKLQK 123

Query: 418 FTTKAEADQRWPRPTRDDPGKDKGGPQ 436
           F +K   D   P P    P +D   P+
Sbjct: 124 FVSKERTD---PPPQEQPPRRDNDRPR 147

[Close]

BLAST of Spg030173 vs. NCBI nr
Match: XP_022155873.1 (uncharacterized protein LOC111022886 [Momordica charantia])

HSP 1 Score: 96.3 bits (238), Expect = 7.1e-16
Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 339 TPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIE 398
           TPT++  EQ+LMEI++  LL  P ++K+ P  R K QY LFHRDHGH+T++C  LK+E+E
Sbjct: 6   TPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEEVE 65

Query: 399 ALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 440
            LIR+GYLKE+    +A Q        +   D   P  EIR
Sbjct: 66  GLIRSGYLKEYVEDPKATQ--------NGENDSNSPVREIR 98

[Close]

BLAST of Spg030173 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 95.9 bits (237), Expect = 9.2e-16
Identity = 62/163 (38.04%), Postives = 90/163 (55.21%), Query Frame = 0


Query: 277 AEAEARAAEAEARAAEAEASRKDKKQRTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFE 336
           +EA +RA    +      + R+   +RTD+      D  +G     R R  Q D  +KFE
Sbjct: 163 SEALSRAQRYMSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFE 222

Query: 337 RYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE 396
           +YT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E
Sbjct: 223 KYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEE 282

Query: 397 IEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 440
           +E LI  GYLKE+  + +A Q          G+    P  EIR
Sbjct: 283 VEGLILRGYLKEYVEEPKATQN---------GESDKSPAREIR 316

[Close]

BLAST of Spg030173 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-18
Identity = 65/163 (39.88%), Postives = 93/163 (57.06%), Query Frame = 0


Query: 277 AEAEARAAEAEARAAEAEASRKDKKQRTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFE 336
           +EA +RA    +      + R+   +RTD       D  +G     R R  Q D  +KFE
Sbjct: 338 SEALSRAQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFE 397

Query: 337 RYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE 396
           +YTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E
Sbjct: 398 KYTPTTVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEE 457

Query: 397 IEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 440
           +E LIR GYLKE+  + +A Q          G+    P  EIR
Sbjct: 458 VEGLIRRGYLKEYVEEPKATQN---------GESDKSPAREIR 491

[Close]

BLAST of Spg030173 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-18
Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 295 ASRKDKKQRTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRN 354
           + R+   +RTD+      D  +G     R R  Q D  +KFE+YTPT++P EQ+LMEI++
Sbjct: 140 SKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKD 199

Query: 355 TNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAE 414
             LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +
Sbjct: 200 QRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPK 259

Query: 415 ADQRWPRPTRDDPGKDKGGPQLEIR 440
           A Q          G+ +  P  EIR
Sbjct: 260 ATQN---------GESEKSPAREIR 275

[Close]

BLAST of Spg030173 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.5e-16
Identity = 62/163 (38.04%), Postives = 90/163 (55.21%), Query Frame = 0


Query: 277 AEAEARAAEAEARAAEAEASRKDKKQRTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFE 336
           +EA +RA    +      + R+   +RTD+      D  +G     R R  Q D  +KFE
Sbjct: 163 SEALSRAQRYMSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFE 222

Query: 337 RYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE 396
           +YT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E
Sbjct: 223 KYTSTTVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEE 282

Query: 397 IEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 440
           +E LI  GYLKE+  + +A Q          G+    P  EIR
Sbjct: 283 VEGLILRGYLKEYVEEPKATQN---------GESDKSPAREIR 316

[Close]

BLAST of Spg030173 vs. ExPASy TrEMBL
Match: A0A6J1DDR5 (uncharacterized protein LOC111020115 OS=Momordica charantia OX=3673 GN=LOC111020115 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.0e-15
Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 0


Query: 292 EAEASRKDKKQRTDEGGRGRPDYSRGRPDHGRGRPDQGDYLKKFERYTPTSIPQEQILME 351
           + E +    K +       R DY R    H R RP        +ERYTPT+IP  +IL  
Sbjct: 61  DKEKTDSKSKDKGPSSSSSRDDYRRSDSTHNRSRP--------YERYTPTTIPISEILTN 120

Query: 352 IRNT---NLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKE 411
           I  +    LL  P KL+ +P+ R+K +YCLFHRDHGHST NC +LK +IE LI++ Y K+
Sbjct: 121 IEESEMEKLLKRPEKLRGDPEKRNKDKYCLFHRDHGHSTSNCWELKRQIEDLIQDDYFKK 180

Query: 412 FTTKAEAD 417
           F  K  ++
Sbjct: 181 FVGKPRSN 180

[Close]

BLAST of Spg030173 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.9e-15
Identity = 70/177 (39.55%), Postives = 98/177 (55.37%), Query Frame = 0


Query: 263 KRRSAKTAESEARAAEAEARAAEAEARAAEAEASRKDKKQRTDEGGRGRPDYSRGRPDHG 322
           K+  +  AE+ +R A+    A E      E E  R D+K+  +  G         + D  
Sbjct: 15  KKTPSTFAEALSR-AQKYMSAEEFFHLKKELEGKRADQKR--ERSGEKPLSSKWEKQDRV 74

Query: 323 RGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRD 382
            G   Q D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ P+ R K +YCLFHRD
Sbjct: 75  VG---QKDLPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRD 134

Query: 383 HGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIR 440
           HGH+T +C  LK+E+E LIR GYLKE+    +A      P R++   D   P  EIR
Sbjct: 135 HGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKA-----TPNREN---DNKSPTREIR 177

The following BLAST results are available for this feature:

BLAST of Spg030173 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	4.4e-18	39.88	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159368.1	5.8e-18	40.00	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_023891919.1	1.1e-16	39.46	uncharacterized protein LOC112003925 [Quercus suber]	[more]
XP_022155873.1	7.1e-16	46.53	uncharacterized protein LOC111022886 [Momordica charantia]	[more]
XP_022142767.1	9.2e-16	38.04	uncharacterized protein LOC111012805 [Momordica charantia]	[more]

BLAST of Spg030173 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg030173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	2.1e-18	39.88	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DYL6	2.8e-18	40.00	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	4.5e-16	38.04	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DDR5	1.0e-15	41.41	uncharacterized protein LOC111020115 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DZ52	2.9e-15	39.55	uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Spg030173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 253..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 411..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030173.1	Spg030173.1	mRNA