Spg030114 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAAGAGAAATCTAGCGAAAGAGGACGAGATCATTTGGAGGAAGGATCCAAAGGGGAAGTTCTCTGTTAAGAGCGCCTATAACTTAGCTATCCAAATTGAGGCTCAAGGTTCAGCGTCTGAATCTGATTCCACAGAGTAAAAAAAGCTTTGGAAATCGGTTTGGAAGTTGGATTGTAGGCCTAAAGTGAAGATCAACCTTTGGTAAGCTATGAGCAATGCTCTCCCCACAGTGGAGAACATAAAGAAAAGAGGAATTCTTACTAATGATCGGTGTTATTTGTGCAGGAATAAAAAAAAAAGATGTGGAACATGTGTTCTGGAACTACAAAGTGGTAAGATCTTTGTGGAAGATTTTATTCCCTAAACTTAATATATTATTCCACAATTGCAAGAGTTGGTGGAAGTTCAAAGACTTCTGGGATGGAGCCTCGCGAATTCTGGATGCTAAAGACGCAAGTGCGGCTAGCCACTTAATTTGGGAAATTTGGCAGAAGAGGAACAATTTGAAGCAGTCAAAAGGCAACAAAGACACAAAGCAAATTTTGCAAGACATTCTCAGTGCAGCACACAGATTCATGATCGAAAACGAGTGGGAGAAGACTAACCATGGCAAAAGGTCAGAGACCCTCCCGAGTCACGGGCGTTGGATCCCGCCGGGCAGTTCGCAATGGAAGCTGAATGTGGACGTAGCCTGGTTTGAAGCCTCAAACTCAAGCGGAGTGGGGTGGATAGTCCGGGACTCCGAAGGTTCTCTGATAGGAGCGGGCTCCAAGAAGACAAGTGGAAGATTAAAGATAAAGATGCTTGAAGCCATGACCGTGGTCGAAGGTTTCTCTATTGTATCGGAAAGATTCAGAAATTACCCGGATTGCTCGCTGCATGAGGTCGTCATTGAATCAGATGCCGCTGAAATTGTGAGGTTGATTAACGGAGTTTCCAAAGATTGCTCAGAGATCTCCCTCCTGATCAACGAGATTCGCGAGACAGCGAATCAAATGATCTCGGTTTCGTTCGTGCATTGCCCACGGGCTTCGAACTTTTTGGCCATTCTCTAG ATGCCGAAGAGAAATCTAGCGAAAGAGGACGAGATCATTTGGAGGAAGGATCCAAAGGGGAAGTTCTCTGTTAAGAGCGCCTATAACTTAGCTATCCAAATTGAGGCTCAAGGAATAAAAAAAAAAGATGTGGAACATGTGTTCTGGAACTACAAAGTGGTAAGATCTTTGTGGAAGATTTTATTCCCTAAACTTAATATATTATTCCACAATTGCAAGAGTTGGTGGAAGTTCAAAGACTTCTGGGATGGAGCCTCGCGAATTCTGGATGCTAAAGACGCAAGTGCGGCTAGCCACTTAATTTGGGAAATTTGGCAGAAGAGGAACAATTTGAAGCAGTCAAAAGGCAACAAAGACACAAAGCAAATTTTGCAAGACATTCTCAGTGCAGCACACAGATTCATGATCGAAAACGAGTGGGAGAAGACTAACCATGGCAAAAGGTCAGAGACCCTCCCGAGTCACGGGCGTTGGATCCCGCCGGGCAGTTCGCAATGGAAGCTGAATGTGGACGTAGCCTGGTTTGAAGCCTCAAACTCAAGCGGAGTGGGGTGGATAGTCCGGGACTCCGAAGGTTCTCTGATAGGAGCGGGCTCCAAGAAGACAAGTGGAAGATTAAAGATAAAGATGCTTGAAGCCATGACCGTGGTCGAAGGTTTCTCTATTGTATCGGAAAGATTCAGAAATTACCCGGATTGCTCGCTGCATGAGGTCGTCATTGAATCAGATGCCGCTGAAATTGTGAGGTTGATTAACGGAGTTTCCAAAGATTGCTCAGAGATCTCCCTCCTGATCAACGAGATTCGCGAGACAGCGAATCAAATGATCTCGGTTTCGTTCGTGCATTGCCCACGGGCTTCGAACTTTTTGGCCATTCTCTAG ATGCCGAAGAGAAATCTAGCGAAAGAGGACGAGATCATTTGGAGGAAGGATCCAAAGGGGAAGTTCTCTGTTAAGAGCGCCTATAACTTAGCTATCCAAATTGAGGCTCAAGGAATAAAAAAAAAAGATGTGGAACATGTGTTCTGGAACTACAAAGTGGTAAGATCTTTGTGGAAGATTTTATTCCCTAAACTTAATATATTATTCCACAATTGCAAGAGTTGGTGGAAGTTCAAAGACTTCTGGGATGGAGCCTCGCGAATTCTGGATGCTAAAGACGCAAGTGCGGCTAGCCACTTAATTTGGGAAATTTGGCAGAAGAGGAACAATTTGAAGCAGTCAAAAGGCAACAAAGACACAAAGCAAATTTTGCAAGACATTCTCAGTGCAGCACACAGATTCATGATCGAAAACGAGTGGGAGAAGACTAACCATGGCAAAAGGTCAGAGACCCTCCCGAGTCACGGGCGTTGGATCCCGCCGGGCAGTTCGCAATGGAAGCTGAATGTGGACGTAGCCTGGTTTGAAGCCTCAAACTCAAGCGGAGTGGGGTGGATAGTCCGGGACTCCGAAGGTTCTCTGATAGGAGCGGGCTCCAAGAAGACAAGTGGAAGATTAAAGATAAAGATGCTTGAAGCCATGACCGTGGTCGAAGGTTTCTCTATTGTATCGGAAAGATTCAGAAATTACCCGGATTGCTCGCTGCATGAGGTCGTCATTGAATCAGATGCCGCTGAAATTGTGAGGTTGATTAACGGAGTTTCCAAAGATTGCTCAGAGATCTCCCTCCTGATCAACGAGATTCGCGAGACAGCGAATCAAATGATCTCGGTTTCGTTCGTGCATTGCCCACGGGCTTCGAACTTTTTGGCCATTCTCTAG MPKRNLAKEDEIIWRKDPKGKFSVKSAYNLAIQIEAQGIKKKDVEHVFWNYKVVRSLWKILFPKLNILFHNCKSWWKFKDFWDGASRILDAKDASAASHLIWEIWQKRNNLKQSKGNKDTKQILQDILSAAHRFMIENEWEKTNHGKRSETLPSHGRWIPPGSSQWKLNVDVAWFEASNSSGVGWIVRDSEGSLIGAGSKKTSGRLKIKMLEAMTVVEGFSIVSERFRNYPDCSLHEVVIESDAAEIVRLINGVSKDCSEISLLINEIRETANQMISVSFVHCPRASNFLAIL Homology
BLAST of Spg030114 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]) HSP 1 Score: 102.8 bits (255), Expect = 5.0e-18 Identity = 57/221 (25.79%), Postives = 104/221 (47.06%), Query Frame = 0
BLAST of Spg030114 vs. NCBI nr
Match: XP_024046732.1 (uncharacterized protein LOC112101057 [Citrus clementina]) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-16 Identity = 78/312 (25.00%), Postives = 125/312 (40.06%), Query Frame = 0
BLAST of Spg030114 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia]) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-16 Identity = 63/203 (31.03%), Postives = 95/203 (46.80%), Query Frame = 0
BLAST of Spg030114 vs. NCBI nr
Match: CAB4262994.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 97.1 bits (240), Expect = 2.8e-16 Identity = 76/306 (24.84%), Postives = 133/306 (43.46%), Query Frame = 0
BLAST of Spg030114 vs. NCBI nr
Match: EEC72753.1 (hypothetical protein OsI_06384 [Oryza sativa Indica Group]) HSP 1 Score: 96.3 bits (238), Expect = 4.7e-16 Identity = 69/255 (27.06%), Postives = 116/255 (45.49%), Query Frame = 0
BLAST of Spg030114 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.4e-18 Identity = 57/221 (25.79%), Postives = 104/221 (47.06%), Query Frame = 0
BLAST of Spg030114 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 7.8e-17 Identity = 63/203 (31.03%), Postives = 95/203 (46.80%), Query Frame = 0
BLAST of Spg030114 vs. ExPASy TrEMBL
Match: A0A2N9GAE6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24083 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-16 Identity = 74/261 (28.35%), Postives = 118/261 (45.21%), Query Frame = 0
BLAST of Spg030114 vs. ExPASy TrEMBL
Match: B8AE80 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_06384 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.3e-16 Identity = 69/255 (27.06%), Postives = 116/255 (45.49%), Query Frame = 0
BLAST of Spg030114 vs. ExPASy TrEMBL
Match: A0A7N2N157 (RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 5.1e-16 Identity = 67/250 (26.80%), Postives = 110/250 (44.00%), Query Frame = 0
BLAST of Spg030114 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 5.8e-12 Identity = 42/158 (26.58%), Postives = 75/158 (47.47%), Query Frame = 0
BLAST of Spg030114 vs. TAIR 10
Match: AT1G52990.1 (thioredoxin family protein ) HSP 1 Score: 46.2 bits (108), Expect = 5.2e-05 Identity = 31/126 (24.60%), Postives = 54/126 (42.86%), Query Frame = 0
BLAST of Spg030114 vs. TAIR 10
Match: AT3G23320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 5.2e-05 Identity = 40/160 (25.00%), Postives = 60/160 (37.50%), Query Frame = 0
BLAST of Spg030114 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 45.4 bits (106), Expect = 8.9e-05 Identity = 45/203 (22.17%), Postives = 82/203 (40.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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