Spg030111 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg030111
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold6: 7968844 .. 7969173 (-)
RNA-Seq ExpressionSpg030111
SyntenySpg030111
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAATTGCGTAGAAGTGTTGTCGAGACGGCGAGAGAAAGAAGAAGGGACGACGACGACGACGGAGGAGAAGAAAGAAGAGAAAGGGAGAATGAGAATAAAAGTAGTGTTGACCAAGGAGGAGTTGCAGTGGTTGATGGAGCAAATTAAGGAGGGAGGAGGGAAGGGATTAGAAGAATTGTTGGAAGAAATAGAGAAAGGAAGAGGAAGAGGAGGAAAAAGAGTAGTGAATTGTATTGATGATGATGTAAATAGTGATGCTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCCGAAGTTCCCGATTCGATGCAGAGATAG

mRNA sequence

ATGGGCAATTGCGTAGAAGTGTTGTCGAGACGGCGAGAGAAAGAAGAAGGGACGACGACGACGACGGAGGAGAAGAAAGAAGAGAAAGGGAGAATGAGAATAAAAGTAGTGTTGACCAAGGAGGAGTTGCAGTGGTTGATGGAGCAAATTAAGGAGGGAGGAGGGAAGGGATTAGAAGAATTGTTGGAAGAAATAGAGAAAGGAAGAGGAAGAGGAGGAAAAAGAGTAGTGAATTGTATTGATGATGATGTAAATAGTGATGCTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCCGAAGTTCCCGATTCGATGCAGAGATAG

Coding sequence (CDS)

ATGGGCAATTGCGTAGAAGTGTTGTCGAGACGGCGAGAGAAAGAAGAAGGGACGACGACGACGACGGAGGAGAAGAAAGAAGAGAAAGGGAGAATGAGAATAAAAGTAGTGTTGACCAAGGAGGAGTTGCAGTGGTTGATGGAGCAAATTAAGGAGGGAGGAGGGAAGGGATTAGAAGAATTGTTGGAAGAAATAGAGAAAGGAAGAGGAAGAGGAGGAAAAAGAGTAGTGAATTGTATTGATGATGATGTAAATAGTGATGCTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATGCCCCGAAGTTCCCGATTCGATGCAGAGATAG

Protein sequence

MGNCVEVLSRRREKEEGTTTTTEEKKEEKGRMRIKVVLTKEELQWLMEQIKEGGGKGLEELLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSMQR
Homology
BLAST of Spg030111 vs. NCBI nr
Match: KGN53406.1 (hypothetical protein Csa_015211 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-26
Identity = 77/113 (68.14%), Postives = 88/113 (77.88%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEEGTTTTTE----EKKEEKGRMRIKVVLTKEELQWLMEQIKEGGGK 60
           MGNCVEVLSR+RE E+GTTTTT     E++E+KG MRIKVVL KEEL+WL EQIKE GGK
Sbjct: 1   MGNCVEVLSRQRE-EDGTTTTTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKGGK 60

Query: 61  GLEELLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSMQR 110
            LEELLEEIE  RGR  K V+NC    +  + SW+PSLESIMECPE+PD M R
Sbjct: 61  CLEELLEEIE--RGRREKTVMNC---SIQYNVSWKPSLESIMECPEIPDHMFR 107

BLAST of Spg030111 vs. NCBI nr
Match: XP_022942038.1 (uncharacterized protein LOC111447226 [Cucurbita moschata])

HSP 1 Score: 128.6 bits (322), Expect = 3.2e-26
Identity = 78/110 (70.91%), Postives = 83/110 (75.45%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEEGTTTTTE---EKKEEKGRMRIKVVLTKEELQWLMEQIKEGGGKG 60
           MGNCVEVLSRRRE+EE TTT T    EK+E KGR+RIKVVLTKEELQWLMEQ++E GGKG
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTIMEKEERKGRVRIKVVLTKEELQWLMEQVQERGGKG 60

Query: 61  LEELLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSM 108
           LEELL EIE   GR  K         VN D SWRPSLESIME PEVPD M
Sbjct: 61  LEELLGEIE---GRRKK---------VNEDGSWRPSLESIMEVPEVPDRM 98

BLAST of Spg030111 vs. NCBI nr
Match: XP_023543788.1 (uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-25
Identity = 74/111 (66.67%), Postives = 83/111 (74.77%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKE---EGTTTTTEEKKEEKGRMRIKVVLTKEELQWLMEQIKEGGGKG 60
           MGNCVEVLSRRRE+E     TTTTT EK+E KG +RIKVVLTKEELQWLMEQ++E GGKG
Sbjct: 1   MGNCVEVLSRRREEEGTMTTTTTTTMEKEERKGGVRIKVVLTKEELQWLMEQVQERGGKG 60

Query: 61  LEELLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSMQ 109
           LEELL EIE+ R +            V+ D SWRPSLESIME PEVPD M+
Sbjct: 61  LEELLGEIERRRRK------------VDEDGSWRPSLESIMEVPEVPDRME 99

BLAST of Spg030111 vs. NCBI nr
Match: KAG6600517.1 (hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23
Identity = 73/112 (65.18%), Postives = 82/112 (73.21%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEE----GTTTTTEEKKEEKGRMRIKVVLTKEELQWLMEQIKEGGGK 60
           MGNCVEVLSRR E+EE    GTTT  E+++ + G +RIKVVLTKEELQWLMEQ++E GGK
Sbjct: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSMQ 109
           GLEELL EIE   GR  K         VN D SWRPSLESIME PEVPD M+
Sbjct: 61  GLEELLGEIE---GRRKK---------VNEDGSWRPSLESIMEVPEVPDRME 100

BLAST of Spg030111 vs. NCBI nr
Match: XP_022136656.1 (uncharacterized protein LOC111008308 [Momordica charantia])

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-23
Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEEGTTTTTEEKKEEKGRMRIKVVLTKEELQWLMEQIKEGGGKGLEE 60
           MGNCVE + +  E  E      EEKKE KG MRIKVVLTKEEL+WLME I E GG+ LE+
Sbjct: 1   MGNCVEAVWKPEEAAE------EEKKEMKGGMRIKVVLTKEELEWLMEHINERGGRNLED 60

Query: 61  LLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSMQR 110
           LLEEI+  RGR  ++V++    D N+ ASW+PSLESI+ECPE+PD MQR
Sbjct: 61  LLEEIQIERGRRSRKVISREALDFNTSASWKPSLESIVECPELPDHMQR 103

BLAST of Spg030111 vs. ExPASy TrEMBL
Match: A0A0A0KZU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.3e-27
Identity = 77/113 (68.14%), Postives = 88/113 (77.88%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEEGTTTTTE----EKKEEKGRMRIKVVLTKEELQWLMEQIKEGGGK 60
           MGNCVEVLSR+RE E+GTTTTT     E++E+KG MRIKVVL KEEL+WL EQIKE GGK
Sbjct: 1   MGNCVEVLSRQRE-EDGTTTTTSTREMEEREKKGGMRIKVVLRKEELEWLTEQIKEKGGK 60

Query: 61  GLEELLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSMQR 110
            LEELLEEIE  RGR  K V+NC    +  + SW+PSLESIMECPE+PD M R
Sbjct: 61  CLEELLEEIE--RGRREKTVMNC---SIQYNVSWKPSLESIMECPEIPDHMFR 107

BLAST of Spg030111 vs. ExPASy TrEMBL
Match: A0A6J1FTR3 (uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC111447226 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-26
Identity = 78/110 (70.91%), Postives = 83/110 (75.45%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEEGTTTTTE---EKKEEKGRMRIKVVLTKEELQWLMEQIKEGGGKG 60
           MGNCVEVLSRRRE+EE TTT T    EK+E KGR+RIKVVLTKEELQWLMEQ++E GGKG
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTIMEKEERKGRVRIKVVLTKEELQWLMEQVQERGGKG 60

Query: 61  LEELLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSM 108
           LEELL EIE   GR  K         VN D SWRPSLESIME PEVPD M
Sbjct: 61  LEELLGEIE---GRRKK---------VNEDGSWRPSLESIMEVPEVPDRM 98

BLAST of Spg030111 vs. ExPASy TrEMBL
Match: A0A6J1C443 (uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008308 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.6e-23
Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEEGTTTTTEEKKEEKGRMRIKVVLTKEELQWLMEQIKEGGGKGLEE 60
           MGNCVE + +  E  E      EEKKE KG MRIKVVLTKEEL+WLME I E GG+ LE+
Sbjct: 1   MGNCVEAVWKPEEAAE------EEKKEMKGGMRIKVVLTKEELEWLMEHINERGGRNLED 60

Query: 61  LLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSMQR 110
           LLEEI+  RGR  ++V++    D N+ ASW+PSLESI+ECPE+PD MQR
Sbjct: 61  LLEEIQIERGRRSRKVISREALDFNTSASWKPSLESIVECPELPDHMQR 103

BLAST of Spg030111 vs. ExPASy TrEMBL
Match: A0A6N2BDF3 (Uncharacterized protein OS=Solanum chilense OX=4083 GN=EJD97_012349 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13
Identity = 56/114 (49.12%), Postives = 67/114 (58.77%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEEGTTTTTEE-----KKEEKGRMRIKVVLTKEELQWLMEQIKEGGG 60
           MGNCVE   +R   EE      E+     K+E K  MR+KVVLTKEEL+WL+ Q+K   G
Sbjct: 1   MGNCVETCLQREITEESQICEDEKSVKFHKEEGKTNMRLKVVLTKEELEWLLLQLKFREG 60

Query: 61  KGLEELLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSMQR 110
           K LEE L EIEK RG+      NC        + W+PSLESI E PEVP+ M R
Sbjct: 61  KNLEEFLGEIEKNRGK------NC--------SGWKPSLESITESPEVPEMMDR 100

BLAST of Spg030111 vs. ExPASy TrEMBL
Match: A0A3Q7IQY7 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.6e-13
Identity = 56/114 (49.12%), Postives = 67/114 (58.77%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEEGTTTTTEE-----KKEEKGRMRIKVVLTKEELQWLMEQIKEGGG 60
           MGNCVE   +R   EE      E+     K+E K  MR+KVVLTKEEL+WL+ Q+K   G
Sbjct: 1   MGNCVETCLQREITEESQIGEDEKTVKFHKEEGKTNMRLKVVLTKEELEWLLLQLKFREG 60

Query: 61  KGLEELLEEIEKGRGRGGKRVVNCIDDDVNSDASWRPSLESIMECPEVPDSMQR 110
           K LEE L EIEK RG+      NC        + W+PSLESI E PEVP+ M R
Sbjct: 61  KNLEEFLGEIEKNRGK------NC--------SGWKPSLESITESPEVPEMMDR 100

BLAST of Spg030111 vs. TAIR 10
Match: AT1G64405.1 (unknown protein; Has 13 Blast hits to 13 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 4.3e-05
Identity = 39/123 (31.71%), Postives = 58/123 (47.15%), Query Frame = 0

Query: 1   MGNCVEVLSRRREKEEGTTTTTEEKKEE-----------KGRMRIKVVLTKEELQWLMEQ 60
           MGNC+E    + E EEG    TE  KE             G M++K+VLT+ EL   + Q
Sbjct: 1   MGNCME-RWMQGEGEEGKIEVTERAKESFKLDGDDNEDGHGGMKVKIVLTRHELDMFLLQ 60

Query: 61  IKEGGGKGL---EELLEEIEKGRGRGGKRVVNCID----DDVNSDASWRPSLESIMECPE 106
           +       L   ++++ E+E       KR++            S  +W P+LESI+ECPE
Sbjct: 61  MNRSHDGNLMITKDVMVELE-------KRIIRASSFSSLSSSPSSIAWEPALESILECPE 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN53406.11.1e-2668.14hypothetical protein Csa_015211 [Cucumis sativus][more]
XP_022942038.13.2e-2670.91uncharacterized protein LOC111447226 [Cucurbita moschata][more]
XP_023543788.11.6e-2566.67uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo][more]
KAG6600517.11.5e-2365.18hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022136656.13.3e-2360.55uncharacterized protein LOC111008308 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KZU95.3e-2768.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1[more]
A0A6J1FTR31.5e-2670.91uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC1114472... [more]
A0A6J1C4431.6e-2360.55uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6N2BDF32.0e-1349.12Uncharacterized protein OS=Solanum chilense OX=4083 GN=EJD97_012349 PE=4 SV=1[more]
A0A3Q7IQY72.6e-1349.12Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G64405.14.3e-0531.71unknown protein; Has 13 Blast hits to 13 proteins in 7 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR35704OS02G0254600 PROTEINcoord: 1..108
NoneNo IPR availablePANTHERPTHR35704:SF1OS02G0254600 PROTEINcoord: 1..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg030111.1Spg030111.1mRNA