Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCCAACGTACCCATAGAGTCGATACGGTCATCTTCCTCTGAGTATGATGAGTTGAGTACTGTGCTACAATGGGCAGAGCAGACAACTAAAACATGGGGATAATTTGCCTTTTAAAAGCCTCGTGTCGTCATCCTTTCCAAGTCAAGTTCAAATCATTGCTAATGAGCTAGGGGATTTGAAGGCCATTTGGGAAGGTTTAATGCCGGAAAGAAGATTTCTGTTCTCAAAGAGATACGGCCATATTGCAGACCTCATGTATATTCCAATTAACCGGTTCACCATCCAGGCTTTATTAGAATTCTGGGACCCGGCCTACAAGTGTTTCGCATTCCAAGATTTTGAGTTGGTGCCGACCATTGAGGAGTACCACACGATGCTGAACATTGAAGAAAAAGGTGGAGAAATGATCTATTGTTTCAACCCACAGTTAACTGCAAAGAGAACTTTATCCAGATTTCTAGCTGTACACCTAAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATCTGCAGATTATCTAACAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGATTGGTTCTGCTAGCTTTGTGCATCTACGGGATGGTCTTGTATCCCAGAGTTAAAGGATATGTGGATGGTGATGTTTTGAAGCTATTCTTCAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGCGCTCAATTATTGTAAGTCCAACAAAGGCGGGAAGTTGAGATGTTGTGTGCCCTTACTCTATATTTGGGTGCATAGTCATTTTAAGTTCCCAGAAGATTTTGGCTGTCCAAAAATCAACTTCAGCAGCACGTGGAATCTAACAAGGAGTACAATTGCAGAATTTGGCACGGCACCATGGAACTCAAGTTTTCCAAGGAAAGAAGCATGGGTGTCCTTCTTTTCGAATTCCAAATTAGAGCATGTGATTTGGAAGGCACATTGGATGCCCCTAAAAGCCTTAATCTACAGATGCGGGAGCTTCCACACAGTCCCTCTAGTAGGCCCTTGGGGATGCGTCCATTATGCTCCGTTGTTGGTCTTGCGACAAAGTTGGTTTAAACAGTTCATACCAGCAACTCATGGTTTGCATAAATTAGAATTTTCCTACAGTTGCGAGGATTCTAACGAAAAGAAGCGACAAGTGCTAACTTCCTGGAGAACAGTCAGAAGGATAAATGGCAATAGTCATTCTGAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCTTCTAATAGAGCAGCAGATAAGCCTAACCAGCTAGCGACAGAGCGGAAAGAGTTGGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAACGTTTGATGAACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGGAGAATAGAAGGTTGATTAAGGATAATCATGCTCTGAGGAATGAAAATGCTGCATTACGAAGGGCAACTCGTTCACAAGAGAACATGATCAAAGACCTTTCAAAAGGCAAAGAGACTCTCTTAGAGTTAGTTGCGGAATTAAATGAAACCATCAACAAGCAGAAAACGCAACTTATCGAGTTTGAAGAAGCCAATACTGCTCTAAGGCGAACACTGGACAATCTACGCGTGAACATGCAGGCTCAATCAGAAGAGTCTGAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAGCTCCAAGCATTTCAAAGGGCAAGCGAACAATTGTCACTAGAGAGAGGACAACTAAAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAATAATTCTTGGGAAAGTAAATCAAACCATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATCTGCGAGAGAATACATCACCTATGGCCTCTAATGCGGAGGAGTTGTTTGAGTTTTTAGGGAAGATTCGTAGAGACCTAGGGTATTTTGGTCACTTTCATTAATGTTCCCTGTTCCTTGTTTTCCAATTCCCAATTGTTTATTTTGTAGATATATTCATTTTTTTTCCCTCAATAATAAAATTTCATTCATTCATGCATCTCATACTGTTCCTTCTTCTATTCCTTTTGTACTTACTCTAAGACTTTTCTTTTAAAAATAAAAACAGAACAATAAAATAGCTCGTTCAACAAGAGTCTACCACACTAGGCGTAGAACAAGGATTATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATTGAGGAAATCAGGGAAAAGGTTGATGCAATCATTGCCGCTTTAGAAAAGGGCAAAATGATTGCAGATACGACTACACCAGACACTCCGATTGGAAACCCTCAAGCTGGCCTACCATTTCCACCCAGTTTCGCTTCACATGTTCATACGACAGCAAAAACGTCCATGCCACAACATACTACCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTCCATCATTTAAAGAAGGCCAAATCCCCCAAATACCCATGGCTAGCCAAGCTGGTGCTTCTTATTTCAAACCAGAATTTTCAAAATACCTTTTGCGGTCCCTAACTTGGATGACCCAGAAGTAAAGAAGGAGTTAACCGCGCCCTCTAATGAAAAACTTGAAGTTTTAGAGGAAAGATTGAGGGCAGTCGAGGGCACTAGTGTTTTTGGAAACATGGATGCCACTCAATTATGTTTAGTTCCAGACGTTGTGATCCCACCGAAATTCAAACTTCCTGAATTTGAGAAATACGACGGGACAACATGCCCTAAAAGTCACATTGTTATGTACTGTAGGAAGATGGCAGCGCACGTTCATACTGATAAGCTGCTCATACATTGCTTTCAGGATAGCTTAAAGGGTCCAGCTGCCCGTTGGTATATGCAGTTGGATAGTTCACATGTTGTCACATGGAAGAACTTGGCCGATTCCTTCCTCAAACAGTACAAGCACAATATTGATTTGGCTCCCGACCGACTGGACTTACAGAGGATGGAAAAGAAGAGTACTGAAGACTTTAAAGATTATGCTCAAAGGTGGCGGGATACGGCGGCTCAAGTCCAACCCCCTTTAACGGATAAGGAGCTTTCTGCCATGTTCATCAATACCTTAAGGTCCCCATTCTATGAACATATGATTGGAAGTGCGTCAACCAATTTCTCTGATATCATGACAATTGGAGAAAGAATTGAGTACGGGATCAAACATGGTAGAATAGCCAAAACCGTTGAATCCTCGGGCACAAAGAAGGGCAATACTTCAAAGAAGAAGGAGGGAGAAGTACAGATGATAGGGAAAGTGGATAAGTCCCATCGACAAATCCACCAACCCGTCGCACAATATCCTTCAAATTATTTACCTACATACGGATACTATCCACACCAGGTGAATAATGCATCAACGCAGTACTCCCCATTTTATGGCCAAAATACCAGACCCCAAATGAATCAGAATTTTCAGTCTCGTAGACAACAACCAGTCACTCCAAGTCAACAAAATAATCGAGCACCTTACAAGCAAGCCCAATTTGATCCGATTCCGATGACATATACTGAGCTCTTGCCTCAGTTAATTCAGAACCATCAGTTGGCACCCAAGCCTGTTGCTCCACTGCAACCCCCTTATCCAAGATGGTATGATCCCAATGCAAGGTGTGATTACCATGCAGGTGCTGTTGGGCATTCTACAGAAAATTGCACTGCTTTGAAGTATAGGGTGCAAGAGCTCATTAAGGCCGGATGGTTAAATTTCAAAAAAGAGGAGGGACCCAATGTTGATAATAATCCTTTACCAAATCACCAGGTGAATGCAATAGAGCAGTGTCAAGATATTATCAAGAAGATAGATGTTGCAGAGATCATGACTCCTGAGGAGAAGCTTTTTGAGATTCTCCTTGTTAACGGATATGTATCAATAGAGTATGCACACAAGGACCTTGTTCAAGAAGGATTCGATGATAATTTGACTTGCCTATTTCATGCTGGGGCAAAGGGGCATTCTTTGGAACAATGTCGTCGTTTTCATAAGAGGGTCCAAGAACTGGTGGACTCAAAATTTCTTGTGGTCACCCAAGCCCATCTCCGGGAGGATGAAATAGACGCTGTGGAAGAATTGCTGCCTAAAGAAAGTTTGAATTCATCTTTCAAACTGAAGCCACTCACGATCTATTACCGTGAGAAGACTACTACTCATGATCCAAAGTCGATCACCATTCAGGTGCCGGCTCCTTTCAAGTACAAGAGCTCTAAGGCAGTACCATGGAGTTATGAGTACAAAGTAACTATTAACTCAGAAACGCCACCACTTCCAGTTGACAACATTTCCGGAACGGGAGGCGTAACACGAAATGGTAAATGCTACACTCCAGATCAGTTATTGAAGTGCTCAAAGAATACAATAGAAGAGAAAAATGAGAAAGTTGAAGGTATTAATGATAGCAATGTCAAGCCTAAAGAAACAACAGTGATAAAGAAATCAAGGGGCAAACAGACTGTGTCCGAAGAAGAAACTCAAGAATTTCTAAAGTTGGTTAAGCAAAGTGAATACAAAGTAGTGGAACAGCTAGCTCAGACGCCTGCTAAGATTTCCATATTATCTTTGTTGCTATCCTCTGATTCACATTGAGACACGATATTGGAAGCTTTGAATCAAGCATATGTTTCCAAGGACATCACTTCAGATGGTCTAGATAATATCGTGGGAAATATAACTGCTCACAACACCATAACTTTCACTGATGATGAGATACCGCCCGAAGGCACAGGACACACGAAAGCACTGCATATTTCAGTCAAGTGCAATAACTTTTTAGTAGCAAAAGTCCTGGTGGATAATGGGTCTTCTTTGAACATAATGCCAAAATCAACGTTGGAAAGATTGCCAGTGGAGATGTCCCATATGAGGCCAAGTACCGTAGTAGTAAGGGCCTTCGATGGGGCACGCAGTCAGGTGGTGGGTGACATTGAGATTCCAATACAAATCGGTCCATGCACATTTAACATAACCTTCCAAGTTATGGATATCCCCTCTGCTTACAGTTTCTTATTAGGGCGGCCTTGGATACATTCTGCAGGAGCTATCCCATCATCGCTGCACCAGAAACTCAAGTTTTCAATTGGAAGGAGCCTAGTAATTGTATCTGGTCAAGAGGATATCTTGGTTTCTAGGCCAGCTTCAATGCCATATATTGATGCAGCAGAGGAAGCTTTTGAGTCGTCATTTCAAACATTCGAGGTGGCAAGTGCCACGACGCTATATGGGGGAGGCAAGAAATCTAAATCTCGATCTTCAGCCATGATGTTTGAAAGCAACAGTCGATTAGATGACATTTTAAGCCTATCGAAAAATACAAAAAGATTTGGGCTTGGATATAAGCCGAATAAAGCAGACATGATCAGGGTACATAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTTGCGAACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGCTGGTATAATTCGTCCAGGAGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAGAATTGGGTCCATCGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGAGTACTATTGAATTACCGTCATTTGCTGTTAAGATGTCAAAGTAA
mRNA sequence
ATGAATGCCAACGTACCCATAGAGTCGATACGGTCATCTTCCTCTGAGTATGATGATCAAGTTCAAATCATTGCTAATGAGCTAGGGGATTTGAAGGCCATTTGGGAAGGTTTAATGCCGGAAAGAAGATTTCTGTTCTCAAAGAGATACGGCCATATTGCAGACCTCATGTATATTCCAATTAACCGGTTCACCATCCAGGCTTTATTAGAATTCTGGGACCCGGCCTACAAGTGTTTCGCATTCCAAGATTTTGAGTTGGTGCCGACCATTGAGGAGTACCACACGATGCTGAACATTGAAGAAAAAGGTGGAGAAATGATCTATTGTTTCAACCCACAGTTAACTGCAAAGAGAACTTTATCCAGATTTCTAGCTGTACACCTAAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATCTGCAGATTATCTAACAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGATTGGTTCTGCTAGCTTTGTGCATCTACGGGATGGTCTTGTATCCCAGAGTTAAAGGATATGTGGATGGTGATGTTTTGAAGCTATTCTTCAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGCGCTCAATTATTCAGCACGTGGAATCTAACAAGGAGTACAATTGCAGAATTTGGCACGGCACCATGGAACTCAAGTTTTCCAAGGAAAGAAGCATGGGTGTCCTTCTTTTCGAATTCCAAATTAGAGCATGTGATTTGGAAGGCACATTGGATGCCCCTAAAAGCCTTAATCTACAGATGCGGGAGCTTCCACACAGTCCCTCTACAACTCATGGTTTGCATAAATTAGAATTTTCCTACAGTTGCGAGGATTCTAACGAAAAGAAGCGACAAGTGCTAACTTCCTGGAGAACAGTCAGAAGGATAAATGGCAATAGTCATTCTGAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCTTCTAATAGAGCAGCAGATAAGCCTAACCAGCTAGCGACAGAGCGGAAAGAGTTGGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAACGTTTGATGAACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGGAGAATAGAAGGTTGATTAAGGATAATCATGCTCTGAGGAATGAAAATGCTGCATTACGAAGGGCAACTCGTTCACAAGAGAACATGATCAAAGACCTTTCAAAAGGCAAAGAGACTCTCTTAGAGTTAGTTGCGGAATTAAATGAAACCATCAACAAGCAGAAAACGCAACTTATCGAGTTTGAAGAAGCCAATACTGCTCTAAGGCGAACACTGGACAATCTACGCGTGAACATGCAGGCTCAATCAGAAGAGTCTGAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAGCTCCAAGCATTTCAAAGGGCAAGCGAACAATTGTCACTAGAGAGAGGACAACTAAAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAATAATTCTTGGGAAAGTAAATCAAACCATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATCTGCGAGAGAATACATCACCTATGGCCTCTAATGCGGAGGAGTTGTTTGAGTTTTTAGGGAAGATTCGTAGAGACCTAGGGCGTAGAACAAGGATTATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATTGAGGAAATCAGGGAAAAGGTTGATGCAATCATTGCCGCTTTAGAAAAGGGCAAAATGATTGCAGATACGACTACACCAGACACTCCGATTGGAAACCCTCAAGCTGGCCTACCATTTCCACCCAGTTTCGCTTCACATGTTCATACGACAGCAAAAACGTCCATGCCACAACATACTACCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTCCATCATTTAAAGAAGGCCAAATCCCCCAAATACCCATGGCTAGCCAAGCTGAGATCATGACTCCTGAGGAGAAGCTTTTTGAGATTCTCCTTGTTAACGGATATGTATCAATAGAGTATGCACACAAGGACCTTGTTCAAGAAGGATTCGATGATAATTTGACTTGCCTATTTCATGCTGGGGCAAAGGGGCATTCTTTGGAACAATGTCGTCGTTTTCATAAGAGGGTCCAAGAACTGGTGGACTCAAAATTTCTTGTGGTCACCCAAGCCCATCTCCGGGAGGATGAAATAGACGCTGTGGAAGAATTGCTGCCTAAAGAAAGTTTGAATTCATCTTTCAAACTGAAGCCACTCACGATCTATTACCGTGAGAAGACTACTACTCATGATCCAAAGTCGATCACCATTCAGGTGCCGGCTCCTTTCAAGTACAAGAGCTCTAAGGCAGTACCATGGAGTTATGAGTACAAAGTAACTATTAACTCAGAAACGCCACCACTTCCAGTTGACAACATTTCCGGAACGGGAGGCGTAACACGAAATGGTAAATGCTACACTCCAGATCAGTTATTGAAATTTGGGCTTGGATATAAGCCGAATAAAGCAGACATGATCAGGGTACATAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTTGCGAACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGCTGGTATAATTCGTCCAGGAGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAGAATTGGGTCCATCGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGAGTACTATTGAATTACCGTCATTTGCTGTTAAGATGTCAAAGTAA
Coding sequence (CDS)
ATGAATGCCAACGTACCCATAGAGTCGATACGGTCATCTTCCTCTGAGTATGATGATCAAGTTCAAATCATTGCTAATGAGCTAGGGGATTTGAAGGCCATTTGGGAAGGTTTAATGCCGGAAAGAAGATTTCTGTTCTCAAAGAGATACGGCCATATTGCAGACCTCATGTATATTCCAATTAACCGGTTCACCATCCAGGCTTTATTAGAATTCTGGGACCCGGCCTACAAGTGTTTCGCATTCCAAGATTTTGAGTTGGTGCCGACCATTGAGGAGTACCACACGATGCTGAACATTGAAGAAAAAGGTGGAGAAATGATCTATTGTTTCAACCCACAGTTAACTGCAAAGAGAACTTTATCCAGATTTCTAGCTGTACACCTAAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATCTGCAGATTATCTAACAGAACTCGCTCGCAAACACATAAATGAAGAAAAGGGATTGGTTCTGCTAGCTTTGTGCATCTACGGGATGGTCTTGTATCCCAGAGTTAAAGGATATGTGGATGGTGATGTTTTGAAGCTATTCTTCAGCATTGAGCAAGGGGTGGATCCAGCCATACCTCTTCTAGCGGAAACGGTTCGGCGCTCAATTATTCAGCACGTGGAATCTAACAAGGAGTACAATTGCAGAATTTGGCACGGCACCATGGAACTCAAGTTTTCCAAGGAAAGAAGCATGGGTGTCCTTCTTTTCGAATTCCAAATTAGAGCATGTGATTTGGAAGGCACATTGGATGCCCCTAAAAGCCTTAATCTACAGATGCGGGAGCTTCCACACAGTCCCTCTACAACTCATGGTTTGCATAAATTAGAATTTTCCTACAGTTGCGAGGATTCTAACGAAAAGAAGCGACAAGTGCTAACTTCCTGGAGAACAGTCAGAAGGATAAATGGCAATAGTCATTCTGAGGGAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCTTCTAATAGAGCAGCAGATAAGCCTAACCAGCTAGCGACAGAGCGGAAAGAGTTGGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAACGTTTGATGAACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGGAGAATAGAAGGTTGATTAAGGATAATCATGCTCTGAGGAATGAAAATGCTGCATTACGAAGGGCAACTCGTTCACAAGAGAACATGATCAAAGACCTTTCAAAAGGCAAAGAGACTCTCTTAGAGTTAGTTGCGGAATTAAATGAAACCATCAACAAGCAGAAAACGCAACTTATCGAGTTTGAAGAAGCCAATACTGCTCTAAGGCGAACACTGGACAATCTACGCGTGAACATGCAGGCTCAATCAGAAGAGTCTGAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAGCTCCAAGCATTTCAAAGGGCAAGCGAACAATTGTCACTAGAGAGAGGACAACTAAAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAATAATTCTTGGGAAAGTAAATCAAACCATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATCTGCGAGAGAATACATCACCTATGGCCTCTAATGCGGAGGAGTTGTTTGAGTTTTTAGGGAAGATTCGTAGAGACCTAGGGCGTAGAACAAGGATTATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATTGAGGAAATCAGGGAAAAGGTTGATGCAATCATTGCCGCTTTAGAAAAGGGCAAAATGATTGCAGATACGACTACACCAGACACTCCGATTGGAAACCCTCAAGCTGGCCTACCATTTCCACCCAGTTTCGCTTCACATGTTCATACGACAGCAAAAACGTCCATGCCACAACATACTACCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTCCATCATTTAAAGAAGGCCAAATCCCCCAAATACCCATGGCTAGCCAAGCTGAGATCATGACTCCTGAGGAGAAGCTTTTTGAGATTCTCCTTGTTAACGGATATGTATCAATAGAGTATGCACACAAGGACCTTGTTCAAGAAGGATTCGATGATAATTTGACTTGCCTATTTCATGCTGGGGCAAAGGGGCATTCTTTGGAACAATGTCGTCGTTTTCATAAGAGGGTCCAAGAACTGGTGGACTCAAAATTTCTTGTGGTCACCCAAGCCCATCTCCGGGAGGATGAAATAGACGCTGTGGAAGAATTGCTGCCTAAAGAAAGTTTGAATTCATCTTTCAAACTGAAGCCACTCACGATCTATTACCGTGAGAAGACTACTACTCATGATCCAAAGTCGATCACCATTCAGGTGCCGGCTCCTTTCAAGTACAAGAGCTCTAAGGCAGTACCATGGAGTTATGAGTACAAAGTAACTATTAACTCAGAAACGCCACCACTTCCAGTTGACAACATTTCCGGAACGGGAGGCGTAACACGAAATGGTAAATGCTACACTCCAGATCAGTTATTGAAATTTGGGCTTGGATATAAGCCGAATAAAGCAGACATGATCAGGGTACATAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTTGCGAACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGCTGGTATAATTCGTCCAGGAGATTTTGCAGTTGCAGTAGTGACTAAAGAGGAAGAATTGGGTCCATCGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGAGTACTATTGAATTACCGTCATTTGCTGTTAAGATGTCAAAGTAA
Protein sequence
MNANVPIESIRSSSSEYDDQVQIIANELGDLKAIWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLEFWDPAYKCFAFQDFELVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFLAVHLKEVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRRSIIQHVESNKEYNCRIWHGTMELKFSKERSMGVLLFEFQIRACDLEGTLDAPKSLNLQMRELPHSPSTTHGLHKLEFSYSCEDSNEKKRQVLTSWRTVRRINGNSHSEGVTPEYLQWRIKRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLELVAELNETINKQKTQLIEFEEANTALRRTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLGRRTRIMEEKGEQEKTKRDIEEIREKVDAIIAALEKGKMIADTTTPDTPIGNPQAGLPFPPSFASHVHTTAKTSMPQHTTYNPLYDIPVGQYPFPSFKEGQIPQIPMASQAEIMTPEEKLFEILLVNGYVSIEYAHKDLVQEGFDDNLTCLFHAGAKGHSLEQCRRFHKRVQELVDSKFLVVTQAHLREDEIDAVEELLPKESLNSSFKLKPLTIYYREKTTTHDPKSITIQVPAPFKYKSSKAVPWSYEYKVTINSETPPLPVDNISGTGGVTRNGKCYTPDQLLKFGLGYKPNKADMIRVHKREKERRLARFESCEPEYGEKVIPHLYHSFESAGIIRPGDFAVAVVTKEEELGPSIYPCPENFELNNWSTIELPSFAVKMSK
Homology
BLAST of Spg030099 vs. NCBI nr
Match:
KAA0036949.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 361.3 bits (926), Expect = 2.7e-95
Identity = 234/650 (36.00%), Postives = 345/650 (53.08%), Query Frame = 0
Query: 34 IWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLEFWDPAYKCFAFQDFELVPTIEE 93
IWE L P+RRF+FSK+YGHIA+LMYIP+N F ++A++ F DPAY CF F +L+PTIEE
Sbjct: 2 IWEALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEE 61
Query: 94 YHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESISADYLTE 153
Y ML++ +K E++Y FNP+ T KRTLS+FL VH E+QK +K KG EE++ DYL +
Sbjct: 62 YQAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIK 121
Query: 154 LARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRR 213
+ + +I+E+KGL LLALCIYG V++P+ +GYVD V+KLFF +E+GV+P IP+LAET R
Sbjct: 122 MTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRS 181
Query: 214 S-----------------------------IIQHVESNKEYNC----------------- 273
I H++ E+ C
Sbjct: 182 LNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTIS 241
Query: 274 ----RIWHGTMELK------FSKERSMGVL-------LFEFQIRACDLE--------GTL 333
+W T K F+K S V+ L R D G +
Sbjct: 242 EFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHNVPLLGPWGGV 301
Query: 334 DAPKSLNLQMRELPHSPSTTHGLHKLEFSYSCEDSNEKKRQVLTSWRTVRRINGNSHSEG 393
+ L L+ L TH L + +FSY ED KK
Sbjct: 302 NCTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKTS------------------- 361
Query: 394 VTPEYLQWRIKRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQ 453
I+R K + ++PNQ + EL +N+ L+ ENEKL++
Sbjct: 362 --------SIERGK-------------ETSFEQPNQWIEKSIELEEKNRLLEQENEKLRK 421
Query: 454 EVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHALRNENAALRRA 513
E + M+ T KLE+ + KN+ K E+D + LD+E RR+ K N +L+NE +
Sbjct: 422 ETSQWMDHATYLQNKLEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTFQAT 481
Query: 514 TRSQENMIKDLSKGKETLLELVAELNETINKQKTQLIEFEEANTALRRTLDNLRVNMQAQ 573
SQ+ IKDL GKE L+LV +LN +I K++T++++ E N +LR+T+D+L + M
Sbjct: 482 MGSQDEYIKDLENGKEYFLKLVNDLNTSIRKRETKIMDLEAQNHSLRQTVDSLHLKMVEH 541
Query: 574 SEESEAFKSYSSSLERQLQAFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKV 612
SEE E K+Y+ SL QL A Q +S++++ E L Y ++ DY + D Q+++ +V
Sbjct: 542 SEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKVDYDMQTRDFQVLVERV 601
BLAST of Spg030099 vs. NCBI nr
Match:
KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 354.4 bits (908), Expect = 3.3e-93
Identity = 233/665 (35.04%), Postives = 343/665 (51.58%), Query Frame = 0
Query: 12 SSSSEYDDQVQIIANELGDLKAIWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLE 71
S S++D+ ++ + + L P+RRF+FSK+YGHIA+LMYIP+N F ++A++
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIIN 68
Query: 72 FWDPAYKCFAFQDFELVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLK 131
F DPAY CF F L+PTIEEY ML++ EK E++Y FNP+ T KRTLS+FL VH
Sbjct: 69 FGDPAYGCFTFGSCNLLPTIEEYQAMLSMPEKEREIVYFFNPKQTTKRTLSKFLETVHAT 128
Query: 132 EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLK 191
E+QK +KVKG EE++ DYL ++ + +I+E+KGL LLALCIYG V++P+ +GYVD V+K
Sbjct: 129 EIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIK 188
Query: 192 LFFSIEQGVDPAIPLLAETVRRS---------------------IIQHVESNKEYNC--- 251
LFF +E+GV+P IP+LAET R I H++ E+ C
Sbjct: 189 LFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFRCPRL 248
Query: 252 ------------------RIWHGTMELK------FSKERSMGVL-------LFEFQIRAC 311
+W T K F+K S V+ L R
Sbjct: 249 DFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCG 308
Query: 312 DLE--------GTLDAPKSLNLQMRELPHSPSTTHGLHKLEFSYSCEDSNEKKRQVLTSW 371
D G ++ L L+ L TH L + +FSY ED KKRQ + +W
Sbjct: 309 DFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAW 368
Query: 372 RTVRRINGNSHSEGVTPEYLQWRIKRSKIPITTRDNVGESSNRAA-DKPNQLATERKELV 431
+++R+I H EGVT Y W+ R K I V ES + ++PNQ + EL
Sbjct: 369 KSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVESGKETSFEQPNQWIEKSIELE 428
Query: 432 GRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIK 491
+N+ L+ ENEKL++E + M+ T +LE+ + KN+ K E+D + LDEE RR+ K
Sbjct: 429 EKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMNK 488
Query: 492 DNHALRNENAALRRATRSQENMIKDLSKGKETLLELVAELNETINKQKTQLIEFEEANTA 551
N +L+NE T
Sbjct: 489 ANRSLKNE-------------------------------------------------KTT 548
Query: 552 LRRTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSLERGQLKEKYSSLRGD 611
L+ T+ L + M +SEE E K+Y+ SL QL A Q +S++++ E L Y ++ D
Sbjct: 549 LQATV-GLHLKMAERSEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKVD 608
BLAST of Spg030099 vs. NCBI nr
Match:
KAA0066094.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 331.3 bits (848), Expect = 3.0e-86
Identity = 192/492 (39.02%), Postives = 281/492 (57.11%), Query Frame = 0
Query: 20 QVQIIANELGDLKAIWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLEFWDPAYKC 79
Q+ N+L +LK IWE L P+RRF+FSK+YGHIA+LMYIP+N F ++A++ FWDPAY C
Sbjct: 48 QLSFTQNDLANLKMIWEALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIINFWDPAYGC 107
Query: 80 FAFQDFELVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKV 139
F F +L+PTIEEY ML++ K E++Y FNP+ T KRTLS+FL VH ++QK +KV
Sbjct: 108 FTFGSCDLLPTIEEYQAMLSMPGKEREIVYFFNPKKTTKRTLSKFLETVHAAKIQKYIKV 167
Query: 140 KGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLKLFFSIEQG 199
KG EE++ DYL ++ + +++E+KGL LLALCIYG V++P+ +GYVDG
Sbjct: 168 KGGEENVPFDYLIKMTQTYVDEDKGLTLLALCIYGAVIFPKAEGYVDG------------ 227
Query: 200 VDPAIPLLAETVRRSIIQHVESNKEYNCRIWHGTMELKFSKERSMGVLLFEFQIRACDLE 259
+++I Y C +H +
Sbjct: 228 -------------KAVI--------YRCGDFH--------------------SVPLLGPW 287
Query: 260 GTLDAPKSLNLQMRELPHSPSTTHGLHKLEFSYSCEDSNEKKRQVLTSWRTVRRINGNSH 319
G ++ L L L TH L + +FSY ED KKRQ + +W+++R+I H
Sbjct: 288 GGVNYTPLLVLHQVWLKQFIPPTHNLQEFDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGH 347
Query: 320 SEGVTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENE 379
EGVT Y W+ R K I +R+ V + ++PNQ + EL +N+ L+ ENE
Sbjct: 348 YEGVTSGYEAWQANRRKNIIDISREVVERGKKTSFEQPNQWIEKSIELEEKNRLLEQENE 407
Query: 380 KLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHALRNENAA 439
KL++E + M+ T +LE+ + KN+ K E+D + LD+E RR+ K N +L+NE
Sbjct: 408 KLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTT 467
Query: 440 LRRATRSQENMIKDLSKGKETLLELVAELNETINKQKTQLIEFEEANTALRRTLDNLRVN 499
L+ SQ+ IKDL GKE LE V +LN +I K++TQ+++ E N +LR+T+D+L +
Sbjct: 468 LQATMGSQDEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQNHSLRQTVDSLHLK 486
Query: 500 MQAQSEESEAFK 510
M SEE E K
Sbjct: 528 MAECSEEYEILK 486
BLAST of Spg030099 vs. NCBI nr
Match:
KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 308.5 bits (789), Expect = 2.1e-79
Identity = 226/711 (31.79%), Postives = 345/711 (48.52%), Query Frame = 0
Query: 34 IWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLEFWDPAYKCFAFQDFELVPTIEE 93
IWE L P+RRF+FSK+YGHIA+LMYIP+N F ++A++ F DPAY CF F +L+PTIEE
Sbjct: 2 IWEALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEE 61
Query: 94 YHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESISADYLTE 153
Y ML++ +K E++Y FNP+ T KRTLS+FL VH E+QK +K KG EE++ DYL +
Sbjct: 62 YQAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIK 121
Query: 154 LARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRR 213
+ + +I+E+KGL LLALCIYG V++P+ +GYVD V+KLFF +E+GV+P IP+LAET R
Sbjct: 122 MTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRS 181
Query: 214 SIIQHVESNKEYNCRI---WHGTMELKFSKERSMGVLLFEFQIRACDLEGTLDAPKSLNL 273
+ + NC + + + L + S EF+ D + ++
Sbjct: 182 LNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTIS 241
Query: 274 QMRELPHSPSTTHGLHKLEF---------------------SYSCEDSNEKKRQVLTSWR 333
+ P+ L F Y C D + +L W
Sbjct: 242 EFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSV--PLLGPWG 301
Query: 334 TVR----------------------RINGNSHSEGVTPEYLQWRIKRSK-IPITTRDNVG 393
V +I H EGVT Y W+ R K I +R+ V
Sbjct: 302 GVNYTPLLVLRQVWLKQFIPPTHNLKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVE 361
Query: 394 ESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSK 453
+ ++PNQ + EL +N+ L+ ENEKL++E + M+ T +LE+ + K
Sbjct: 362 RGKETSFEQPNQWIEKSIELEQKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLK 421
Query: 454 NRAKRERDYDILDEENRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLELVAE 513
N+ K E D + LD+E RR+ K N +++NE
Sbjct: 422 NQDKLETDLETLDKEMRRMNKANRSMKNE------------------------------- 481
Query: 514 LNETINKQKTQLIEFEEANTALRRTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRA 573
T L+ T+ L + M +SEE + K+Y+ L QL A Q +
Sbjct: 482 ------------------KTTLQATV-GLHLKMAERSEEYKILKNYADFLHYQLTALQNS 541
Query: 574 SEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDL 633
S++++ E L Y ++ DY + D Q+++ +V+QT+ ++++++RA GFAEWA
Sbjct: 542 SKRITQEYESLNTDYVQMKVDYDLHTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAGKY 601
Query: 634 RENTSPMASNAEELFEFLGKIRRDLGRR--TRIMEEKG-EQEKTKRDIEEIREKVDAIIA 692
T IR R ++IMEEK + +K +++I + E+V I+
Sbjct: 602 SSFT---------------PIRHPYNTRYKSQIMEEKDKDMDKMRQEINNLGEQVSKILE 643
BLAST of Spg030099 vs. NCBI nr
Match:
KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 87.4 bits (215), Expect = 7.4e-13
Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = 0
Query: 877 ISGTGGVTRNGKCYT----PDQLLKFGLGYKPNKADMIRVHKREKERRLARFESCEPEYG 936
I G GG + N T P +FGLGYKP+ D IR+ +++K++RL + E E +
Sbjct: 1372 IMGGGGYSLNKNLETLLKIPSNDGRFGLGYKPSIYDKIRLQEKKKKKRLVKLEMREFDPS 1431
Query: 937 EKVIPHLYHSFESAGIIRPGD--------------FAVAVVTKEEEL-GPSIYPCPENFE 991
K+IP LY +F+SAGI D +VA V +E G ++Y CP +FE
Sbjct: 1432 IKLIPELYDTFKSAGISYSSDNSDLKDDLLTKMESLSVAAVAQEASFEGNTVYACPPDFE 1491
HSP 2 Score: 276.6 bits (706), Expect = 8.6e-70
Identity = 164/425 (38.59%), Postives = 228/425 (53.65%), Query Frame = 0
Query: 20 QVQIIANELGDLKAIWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLEFWDPAYKC 79
Q+ N+L +LK IWE L P+RRF+FSK+YGHI +LMYIP+N F ++A++ FWDPAY C
Sbjct: 48 QLSFTQNDLANLKMIWEALTPQRRFMFSKKYGHIVELMYIPVNYFALRAIINFWDPAYGC 107
Query: 80 FAFQDFELVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKV 139
F F +L+PTIEEY ML++ EK E++Y FNP+ T KRTLS+FL VH E+QK +K+
Sbjct: 108 FTFGSCDLLPTIEEYQAMLSMPEKEREIVYFFNPKQTTKRTLSKFLETVHAAEIQKYIKI 167
Query: 140 KGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLKLFFSIEQG 199
KG EE++ DYL ++ + +++E+KGL LLALCIYG V++P+ +GYVDG V+KLFF +E+G
Sbjct: 168 KGGEENVPFDYLIKMTQTYVDEDKGLTLLALCIYGAVIFPKAEGYVDGKVIKLFFEMERG 227
Query: 200 VDPAIPLLAETVRRS---------------------IIQHVESNKEYNC----------- 259
V+P IP+LAET R I H++ E+ C
Sbjct: 228 VNPIIPILAETFRSLNYCRNKGEGKLNCCLPLLYIWIHSHIKFPAEFRCPRLDFSSPWNL 287
Query: 260 ----------RIWHGTMELK------FSKERSMGVL-------LFEFQIRACDL------ 319
+W T K F+K S V+ L R D
Sbjct: 288 IRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSKNVVWKAQWMPLKAVIYRCRDFHSMPLL 347
Query: 320 --EGTLDAPKSLNLQMRELPHSPSTTHGLHKLEFSYSCEDSNEKKRQVLTSWRTVRRING 379
G ++ L L+ L TH L + +FSY ED KKRQ + +W+++R+I
Sbjct: 348 GPRGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKD 407
BLAST of Spg030099 vs. ExPASy TrEMBL
Match:
A0A5A7T6E2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=4 SV=1)
HSP 1 Score: 361.3 bits (926), Expect = 1.3e-95
Identity = 234/650 (36.00%), Postives = 345/650 (53.08%), Query Frame = 0
Query: 34 IWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLEFWDPAYKCFAFQDFELVPTIEE 93
IWE L P+RRF+FSK+YGHIA+LMYIP+N F ++A++ F DPAY CF F +L+PTIEE
Sbjct: 2 IWEALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEE 61
Query: 94 YHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESISADYLTE 153
Y ML++ +K E++Y FNP+ T KRTLS+FL VH E+QK +K KG EE++ DYL +
Sbjct: 62 YQAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIK 121
Query: 154 LARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRR 213
+ + +I+E+KGL LLALCIYG V++P+ +GYVD V+KLFF +E+GV+P IP+LAET R
Sbjct: 122 MTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRS 181
Query: 214 S-----------------------------IIQHVESNKEYNC----------------- 273
I H++ E+ C
Sbjct: 182 LNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTIS 241
Query: 274 ----RIWHGTMELK------FSKERSMGVL-------LFEFQIRACDLE--------GTL 333
+W T K F+K S V+ L R D G +
Sbjct: 242 EFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHNVPLLGPWGGV 301
Query: 334 DAPKSLNLQMRELPHSPSTTHGLHKLEFSYSCEDSNEKKRQVLTSWRTVRRINGNSHSEG 393
+ L L+ L TH L + +FSY ED KK
Sbjct: 302 NCTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKTS------------------- 361
Query: 394 VTPEYLQWRIKRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQ 453
I+R K + ++PNQ + EL +N+ L+ ENEKL++
Sbjct: 362 --------SIERGK-------------ETSFEQPNQWIEKSIELEEKNRLLEQENEKLRK 421
Query: 454 EVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHALRNENAALRRA 513
E + M+ T KLE+ + KN+ K E+D + LD+E RR+ K N +L+NE +
Sbjct: 422 ETSQWMDHATYLQNKLEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTFQAT 481
Query: 514 TRSQENMIKDLSKGKETLLELVAELNETINKQKTQLIEFEEANTALRRTLDNLRVNMQAQ 573
SQ+ IKDL GKE L+LV +LN +I K++T++++ E N +LR+T+D+L + M
Sbjct: 482 MGSQDEYIKDLENGKEYFLKLVNDLNTSIRKRETKIMDLEAQNHSLRQTVDSLHLKMVEH 541
Query: 574 SEESEAFKSYSSSLERQLQAFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKV 612
SEE E K+Y+ SL QL A Q +S++++ E L Y ++ DY + D Q+++ +V
Sbjct: 542 SEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKVDYDMQTRDFQVLVERV 601
BLAST of Spg030099 vs. ExPASy TrEMBL
Match:
A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)
HSP 1 Score: 354.4 bits (908), Expect = 1.6e-93
Identity = 233/665 (35.04%), Postives = 343/665 (51.58%), Query Frame = 0
Query: 12 SSSSEYDDQVQIIANELGDLKAIWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLE 71
S S++D+ ++ + + L P+RRF+FSK+YGHIA+LMYIP+N F ++A++
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIIN 68
Query: 72 FWDPAYKCFAFQDFELVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLK 131
F DPAY CF F L+PTIEEY ML++ EK E++Y FNP+ T KRTLS+FL VH
Sbjct: 69 FGDPAYGCFTFGSCNLLPTIEEYQAMLSMPEKEREIVYFFNPKQTTKRTLSKFLETVHAT 128
Query: 132 EVQKNVKVKGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLK 191
E+QK +KVKG EE++ DYL ++ + +I+E+KGL LLALCIYG V++P+ +GYVD V+K
Sbjct: 129 EIQKYIKVKGGEENVPFDYLIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIK 188
Query: 192 LFFSIEQGVDPAIPLLAETVRRS---------------------IIQHVESNKEYNC--- 251
LFF +E+GV+P IP+LAET R I H++ E+ C
Sbjct: 189 LFFQMERGVNPIIPILAETFRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFRCPRL 248
Query: 252 ------------------RIWHGTMELK------FSKERSMGVL-------LFEFQIRAC 311
+W T K F+K S V+ L R
Sbjct: 249 DFSSPWNLMRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCG 308
Query: 312 DLE--------GTLDAPKSLNLQMRELPHSPSTTHGLHKLEFSYSCEDSNEKKRQVLTSW 371
D G ++ L L+ L TH L + +FSY ED KKRQ + +W
Sbjct: 309 DFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAW 368
Query: 372 RTVRRINGNSHSEGVTPEYLQWRIKRSKIPITTRDNVGESSNRAA-DKPNQLATERKELV 431
+++R+I H EGVT Y W+ R K I V ES + ++PNQ + EL
Sbjct: 369 KSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVESGKETSFEQPNQWIEKSIELE 428
Query: 432 GRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIK 491
+N+ L+ ENEKL++E + M+ T +LE+ + KN+ K E+D + LDEE RR+ K
Sbjct: 429 EKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMNK 488
Query: 492 DNHALRNENAALRRATRSQENMIKDLSKGKETLLELVAELNETINKQKTQLIEFEEANTA 551
N +L+NE T
Sbjct: 489 ANRSLKNE-------------------------------------------------KTT 548
Query: 552 LRRTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSLERGQLKEKYSSLRGD 611
L+ T+ L + M +SEE E K+Y+ SL QL A Q +S++++ E L Y ++ D
Sbjct: 549 LQATV-GLHLKMAERSEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKVD 608
BLAST of Spg030099 vs. ExPASy TrEMBL
Match:
A0A5A7VFL0 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=4 SV=1)
HSP 1 Score: 331.3 bits (848), Expect = 1.4e-86
Identity = 192/492 (39.02%), Postives = 281/492 (57.11%), Query Frame = 0
Query: 20 QVQIIANELGDLKAIWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLEFWDPAYKC 79
Q+ N+L +LK IWE L P+RRF+FSK+YGHIA+LMYIP+N F ++A++ FWDPAY C
Sbjct: 48 QLSFTQNDLANLKMIWEALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIINFWDPAYGC 107
Query: 80 FAFQDFELVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKV 139
F F +L+PTIEEY ML++ K E++Y FNP+ T KRTLS+FL VH ++QK +KV
Sbjct: 108 FTFGSCDLLPTIEEYQAMLSMPGKEREIVYFFNPKKTTKRTLSKFLETVHAAKIQKYIKV 167
Query: 140 KGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLKLFFSIEQG 199
KG EE++ DYL ++ + +++E+KGL LLALCIYG V++P+ +GYVDG
Sbjct: 168 KGGEENVPFDYLIKMTQTYVDEDKGLTLLALCIYGAVIFPKAEGYVDG------------ 227
Query: 200 VDPAIPLLAETVRRSIIQHVESNKEYNCRIWHGTMELKFSKERSMGVLLFEFQIRACDLE 259
+++I Y C +H +
Sbjct: 228 -------------KAVI--------YRCGDFH--------------------SVPLLGPW 287
Query: 260 GTLDAPKSLNLQMRELPHSPSTTHGLHKLEFSYSCEDSNEKKRQVLTSWRTVRRINGNSH 319
G ++ L L L TH L + +FSY ED KKRQ + +W+++R+I H
Sbjct: 288 GGVNYTPLLVLHQVWLKQFIPPTHNLQEFDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGH 347
Query: 320 SEGVTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENE 379
EGVT Y W+ R K I +R+ V + ++PNQ + EL +N+ L+ ENE
Sbjct: 348 YEGVTSGYEAWQANRRKNIIDISREVVERGKKTSFEQPNQWIEKSIELEEKNRLLEQENE 407
Query: 380 KLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHALRNENAA 439
KL++E + M+ T +LE+ + KN+ K E+D + LD+E RR+ K N +L+NE
Sbjct: 408 KLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTT 467
Query: 440 LRRATRSQENMIKDLSKGKETLLELVAELNETINKQKTQLIEFEEANTALRRTLDNLRVN 499
L+ SQ+ IKDL GKE LE V +LN +I K++TQ+++ E N +LR+T+D+L +
Sbjct: 468 LQATMGSQDEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQNHSLRQTVDSLHLK 486
Query: 500 MQAQSEESEAFK 510
M SEE E K
Sbjct: 528 MAECSEEYEILK 486
BLAST of Spg030099 vs. ExPASy TrEMBL
Match:
A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)
HSP 1 Score: 308.5 bits (789), Expect = 9.9e-80
Identity = 226/711 (31.79%), Postives = 345/711 (48.52%), Query Frame = 0
Query: 34 IWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLEFWDPAYKCFAFQDFELVPTIEE 93
IWE L P+RRF+FSK+YGHIA+LMYIP+N F ++A++ F DPAY CF F +L+PTIEE
Sbjct: 2 IWEALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEE 61
Query: 94 YHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESISADYLTE 153
Y ML++ +K E++Y FNP+ T KRTLS+FL VH E+QK +K KG EE++ DYL +
Sbjct: 62 YQAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIK 121
Query: 154 LARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLKLFFSIEQGVDPAIPLLAETVRR 213
+ + +I+E+KGL LLALCIYG V++P+ +GYVD V+KLFF +E+GV+P IP+LAET R
Sbjct: 122 MTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRS 181
Query: 214 SIIQHVESNKEYNCRI---WHGTMELKFSKERSMGVLLFEFQIRACDLEGTLDAPKSLNL 273
+ + NC + + + L + S EF+ D + ++
Sbjct: 182 LNYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTIS 241
Query: 274 QMRELPHSPSTTHGLHKLEF---------------------SYSCEDSNEKKRQVLTSWR 333
+ P+ L F Y C D + +L W
Sbjct: 242 EFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSV--PLLGPWG 301
Query: 334 TVR----------------------RINGNSHSEGVTPEYLQWRIKRSK-IPITTRDNVG 393
V +I H EGVT Y W+ R K I +R+ V
Sbjct: 302 GVNYTPLLVLRQVWLKQFIPPTHNLKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVE 361
Query: 394 ESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSK 453
+ ++PNQ + EL +N+ L+ ENEKL++E + M+ T +LE+ + K
Sbjct: 362 RGKETSFEQPNQWIEKSIELEQKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLK 421
Query: 454 NRAKRERDYDILDEENRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLELVAE 513
N+ K E D + LD+E RR+ K N +++NE
Sbjct: 422 NQDKLETDLETLDKEMRRMNKANRSMKNE------------------------------- 481
Query: 514 LNETINKQKTQLIEFEEANTALRRTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRA 573
T L+ T+ L + M +SEE + K+Y+ L QL A Q +
Sbjct: 482 ------------------KTTLQATV-GLHLKMAERSEEYKILKNYADFLHYQLTALQNS 541
Query: 574 SEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDL 633
S++++ E L Y ++ DY + D Q+++ +V+QT+ ++++++RA GFAEWA
Sbjct: 542 SKRITQEYESLNTDYVQMKVDYDLHTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAGKY 601
Query: 634 RENTSPMASNAEELFEFLGKIRRDLGRR--TRIMEEKG-EQEKTKRDIEEIREKVDAIIA 692
T IR R ++IMEEK + +K +++I + E+V I+
Sbjct: 602 SSFT---------------PIRHPYNTRYKSQIMEEKDKDMDKMRQEINNLGEQVSKILE 643
BLAST of Spg030099 vs. ExPASy TrEMBL
Match:
A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 3.6e-13
Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = 0
Query: 877 ISGTGGVTRNGKCYT----PDQLLKFGLGYKPNKADMIRVHKREKERRLARFESCEPEYG 936
I G GG + N T P +FGLGYKP+ D IR+ +++K++RL + E E +
Sbjct: 1372 IMGGGGYSLNKNLETLLKIPSNDGRFGLGYKPSIYDKIRLQEKKKKKRLVKLEMREFDPS 1431
Query: 937 EKVIPHLYHSFESAGIIRPGD--------------FAVAVVTKEEEL-GPSIYPCPENFE 991
K+IP LY +F+SAGI D +VA V +E G ++Y CP +FE
Sbjct: 1432 IKLIPELYDTFKSAGISYSSDNSDLKDDLLTKMESLSVAAVAQEASFEGNTVYACPPDFE 1491
HSP 2 Score: 276.6 bits (706), Expect = 4.2e-70
Identity = 164/425 (38.59%), Postives = 228/425 (53.65%), Query Frame = 0
Query: 20 QVQIIANELGDLKAIWEGLMPERRFLFSKRYGHIADLMYIPINRFTIQALLEFWDPAYKC 79
Q+ N+L +LK IWE L P+RRF+FSK+YGHI +LMYIP+N F ++A++ FWDPAY C
Sbjct: 48 QLSFTQNDLANLKMIWEALTPQRRFMFSKKYGHIVELMYIPVNYFALRAIINFWDPAYGC 107
Query: 80 FAFQDFELVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKV 139
F F +L+PTIEEY ML++ EK E++Y FNP+ T KRTLS+FL VH E+QK +K+
Sbjct: 108 FTFGSCDLLPTIEEYQAMLSMPEKEREIVYFFNPKQTTKRTLSKFLETVHAAEIQKYIKI 167
Query: 140 KGVEESISADYLTELARKHINEEKGLVLLALCIYGMVLYPRVKGYVDGDVLKLFFSIEQG 199
KG EE++ DYL ++ + +++E+KGL LLALCIYG V++P+ +GYVDG V+KLFF +E+G
Sbjct: 168 KGGEENVPFDYLIKMTQTYVDEDKGLTLLALCIYGAVIFPKAEGYVDGKVIKLFFEMERG 227
Query: 200 VDPAIPLLAETVRRS---------------------IIQHVESNKEYNC----------- 259
V+P IP+LAET R I H++ E+ C
Sbjct: 228 VNPIIPILAETFRSLNYCRNKGEGKLNCCLPLLYIWIHSHIKFPAEFRCPRLDFSSPWNL 287
Query: 260 ----------RIWHGTMELK------FSKERSMGVL-------LFEFQIRACDL------ 319
+W T K F+K S V+ L R D
Sbjct: 288 IRNTISEFGMAVWDPTYPRKEAWLSFFAKLTSKNVVWKAQWMPLKAVIYRCRDFHSMPLL 347
Query: 320 --EGTLDAPKSLNLQMRELPHSPSTTHGLHKLEFSYSCEDSNEKKRQVLTSWRTVRRING 379
G ++ L L+ L TH L + +FSY ED KKRQ + +W+++R+I
Sbjct: 348 GPRGGVNYTPLLVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKD 407
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0036949.1 | 2.7e-95 | 36.00 | girdin-like [Cucumis melo var. makuwa] | [more] |
KAA0036941.1 | 3.3e-93 | 35.04 | girdin-like [Cucumis melo var. makuwa] | [more] |
KAA0066094.1 | 3.0e-86 | 39.02 | girdin-like [Cucumis melo var. makuwa] | [more] |
KAA0036933.1 | 2.1e-79 | 31.79 | uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa] | [more] |
KAA0036933.1 | 7.4e-13 | 37.59 | uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T6E2 | 1.3e-95 | 36.00 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=... | [more] |
A0A5A7T5S7 | 1.6e-93 | 35.04 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=... | [more] |
A0A5A7VFL0 | 1.4e-86 | 39.02 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=... | [more] |
A0A5A7T1W2 | 9.9e-80 | 31.79 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7T1W2 | 3.6e-13 | 37.59 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |