Spg030068 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030068
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RNase H domain-containing protein
Location	scaffold6: 8473410 .. 8474711 (+)
RNA-Seq Expression	Spg030068
Synteny	Spg030068

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAAGGGGGCCGAGAGATCTTATTGAGGAATTGGCCCTCTTTTGGGCCTCTTACAGTTGGGCTGAAGAAGTTCGAATCCAAGCTTCAATGTTACAGAAATGGCAAGAAACATGATTTTGAAAATAAAGTTTAATTCTGGGTTGGAATACAAGTTTAGTCCTAAATGGTTGTGTCAATTTGGTCCCTGGATTTAAAAAAATGTCAAATAGGTCATTGAACTTTCAATTTTATGTATAACATGCCCTTGAATCTAAAAAAATATCCCATAGATCCTTAAACATTTACTCTTGTGTCCAATAGGTCTCTCAAATTTAAATTTTGTGTCTAATAAATCATTAACCTATTTGACGTTTTTTAAAATTCACAAGCCTAGCGAAACCAAAATTGGAACTTTAGTGTCCCAAGAGACATAAAATTCAATTTTATGTCTAATAGATTGGTTAATTTTTATAAATCTTGAATATATCAAAAACCTATTAGAGACCAAATTGAAAATATGTGGACGGAGGATTTACAATGACGTTCTACCAACAAACGTGGGATGGATGTCAATCCTTGTTGCTTTCTATGCAGAGATAAACCAGAATCTGTGATCCATTTACTCTGGGAGTGCAAGATCACTAAAGGTATATAGCCTAAATATTTTCCCCCCTCTGTTATTGATTCTGTTTTCTCTTCTAATGATAGGAATGGATGGGCTGTCCCCGACTACAGTGAGATATTTTGGAAAGGAGAAGGAATGGAGCTTATGGATGACCAAAGTCTAAGTAGAAGCTTAATAGTGTGCTGGAAAATTTGGGACTACCGCAACAGAATCAGTCATTCAAATCAGATTCCCAACCAAGAGACAATGCAGCAACAAGTTAGCAGAGCCATTGAGGAATACCTAGGAGAAGAAAACACATACCAAGCGGCGGTGAGAACCAGGTACAATCACAACGGCGACTCCGAACGACGACCCACCTGGACGCCGATACCAGAAGGTTCGTGGAAGCTCAGCTGCGATGCGACATGGAATGAAGCAAAAATGCGTGGTGGAGTTGGATGGATTTTCAGAGATTGGAGAGGAATGATGGTGATGGCAGGTTACCGATCGATTAATCGTCCATGGAAGATCCAGTGGCTTGAAGCTTTAGCTATCTGTGATGGTGTGAGATCGATACCCTCGTCTTTTCAGGCATCCGTACGTGTGGAGAGTGATGCTCTTCAAGTGGTGAATGAGTTGGTCTACTTCATTAAAGAAGCCCAAAGTCTCCTTTCTTTGAAAATTATTGGGCCTGTATTCCATGTTCCTTGA

mRNA sequence

ATGCAAAAAGGGGGCCGAGAGATCTTATTGAGGAATTGGCCCTCTTTTGGGCCTCTTACAGTTGGGCTGAAGAAGAATGGATGGGCTGTCCCCGACTACAGTGAGATATTTTGGAAAGGAGAAGGAATGGAGCTTATGGATGACCAAAGTCTAAGTAGAAGCTTAATAGTGTGCTGGAAAATTTGGGACTACCGCAACAGAATCAGTCATTCAAATCAGATTCCCAACCAAGAGACAATGCAGCAACAAGTTAGCAGAGCCATTGAGGAATACCTAGGAGAAGAAAACACATACCAAGCGGCGGTGAGAACCAGGTACAATCACAACGGCGACTCCGAACGACGACCCACCTGGACGCCGATACCAGAAGGTTCGTGGAAGCTCAGCTGCGATGCGACATGGAATGAAGCAAAAATGCGTGGTGGAGTTGGATGGATTTTCAGAGATTGGAGAGGAATGATGGTGATGGCAGGTTACCGATCGATTAATCGTCCATGGAAGATCCAGTGGCTTGAAGCTTTAGCTATCTGTGATGGTGTGAGATCGATACCCTCGTCTTTTCAGGCATCCGTACGTGTGGAGAGTGATGCTCTTCAAGTGGTGAATGAGTTGGTCTACTTCATTAAAGAAGCCCAAAGTCTCCTTTCTTTGAAAATTATTGGGCCTGTATTCCATGTTCCTTGA

Coding sequence (CDS)

ATGCAAAAAGGGGGCCGAGAGATCTTATTGAGGAATTGGCCCTCTTTTGGGCCTCTTACAGTTGGGCTGAAGAAGAATGGATGGGCTGTCCCCGACTACAGTGAGATATTTTGGAAAGGAGAAGGAATGGAGCTTATGGATGACCAAAGTCTAAGTAGAAGCTTAATAGTGTGCTGGAAAATTTGGGACTACCGCAACAGAATCAGTCATTCAAATCAGATTCCCAACCAAGAGACAATGCAGCAACAAGTTAGCAGAGCCATTGAGGAATACCTAGGAGAAGAAAACACATACCAAGCGGCGGTGAGAACCAGGTACAATCACAACGGCGACTCCGAACGACGACCCACCTGGACGCCGATACCAGAAGGTTCGTGGAAGCTCAGCTGCGATGCGACATGGAATGAAGCAAAAATGCGTGGTGGAGTTGGATGGATTTTCAGAGATTGGAGAGGAATGATGGTGATGGCAGGTTACCGATCGATTAATCGTCCATGGAAGATCCAGTGGCTTGAAGCTTTAGCTATCTGTGATGGTGTGAGATCGATACCCTCGTCTTTTCAGGCATCCGTACGTGTGGAGAGTGATGCTCTTCAAGTGGTGAATGAGTTGGTCTACTTCATTAAAGAAGCCCAAAGTCTCCTTTCTTTGAAAATTATTGGGCCTGTATTCCATGTTCCTTGA

Protein sequence

MQKGGREILLRNWPSFGPLTVGLKKNGWAVPDYSEIFWKGEGMELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQQVSRAIEEYLGEENTYQAAVRTRYNHNGDSERRPTWTPIPEGSWKLSCDATWNEAKMRGGVGWIFRDWRGMMVMAGYRSINRPWKIQWLEALAICDGVRSIPSSFQASVRVESDALQVVNELVYFIKEAQSLLSLKIIGPVFHVP

Homology

[Close]

BLAST of Spg030068 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 92.0 bits (227), Expect = 6.9e-15
Identity = 48/165 (29.09%), Postives = 78/165 (47.27%), Query Frame = 0


Query: 43  MELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQQVSRAIEEYLGEENTYQAAV 102
           M+   ++   RS+I+ W+IW+ RN+       P    +Q  + R I    G     +   
Sbjct: 1   MDKAGEEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKGKS 60

Query: 103 RTRYNH---NGDSERRPTWTPIPEGSWKLSCDATWNEAKMRGGVGWIFRDWRGMMVMAGY 162
             +  H     +      W P    SWKL+ +A W      GG+GWI RD +G ++ A  
Sbjct: 61  TNKDLHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASC 120

Query: 163 RSINRPWKIQWLEALAICDGVRSIPSSFQASVRVESDALQVVNEL 205
           R I     I +LE +AIC+G+R+I       + +ESD+L+ ++ L
Sbjct: 121 RIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIHLL 165

[Close]

BLAST of Spg030068 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 91.7 bits (226), Expect = 9.0e-15
Identity = 56/201 (27.86%), Postives = 94/201 (46.77%), Query Frame = 0


Query: 23  LKKNGWAVPDYSEIFWKGEGMELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQ 82
           + +  W   +Y E  W    M+   ++   RS+I+  +IW+ RN+            +Q 
Sbjct: 164 IDRTNWTTKEYWE--WL---MDKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQL 223

Query: 83  QVSRAIEEYLGEENTYQAAVRTRY--NHNGDSERRPTWTPIPEGSWKLSCDATWNEAKMR 142
            + R I    G++   +   +  +     GD+  R  W P    SWKL+ DA W      
Sbjct: 224 AIDRYIINSAGQDTNLKRKSKDFHPIRRIGDN-TRARWKPPTSNSWKLNTDAAWRADTNT 283

Query: 143 GGVGWIFRDWRGMMVMAGYRSINRPWKIQWLEALAICDGVRSIPSSFQASVRVESDALQV 202
            G+GWI RD +G ++  G R I     I +LE +AIC+G+R+I       + +ESD+L+ 
Sbjct: 284 DGIGWILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEA 343

Query: 203 VNELVYFIKEAQSLLSLKIIG 222
           ++ L   +K     + LK+ G
Sbjct: 344 IHLLHRHVK-----IKLKLFG 353

[Close]

BLAST of Spg030068 vs. NCBI nr
Match: XP_022154991.1 (uncharacterized protein LOC111022134 isoform X2 [Momordica charantia])

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-14
Identity = 56/199 (28.14%), Postives = 93/199 (46.73%), Query Frame = 0


Query: 25  KNGWAVPDYSEIFWKGEGMELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQQV 84
           +  W   +Y E  W    M+   ++   RS+I+  +IW+ RN+            +Q  +
Sbjct: 131 RTNWTTKEYWE--WL---MDKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQLAI 190

Query: 85  SRAIEEYLGEENTYQAAVRTRY--NHNGDSERRPTWTPIPEGSWKLSCDATWNEAKMRGG 144
            R I    G++   +   +  +     GD+  R  W P    SWKL+ DA W       G
Sbjct: 191 DRYIINSAGQDTNLKRKSKDFHPIRRIGDN-TRARWKPPTSNSWKLNTDAAWRADTNTDG 250

Query: 145 VGWIFRDWRGMMVMAGYRSINRPWKIQWLEALAICDGVRSIPSSFQASVRVESDALQVVN 204
           +GWI RD +G ++  G R I     I +LE +AIC+G+R+I       + +ESD+L+ ++
Sbjct: 251 IGWILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIH 310

Query: 205 ELVYFIKEAQSLLSLKIIG 222
            L   +K     + LK+ G
Sbjct: 311 LLHRHVK-----IKLKLFG 318

[Close]

BLAST of Spg030068 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-13
Identity = 48/159 (30.19%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 43  MELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQQVSRAIEEYLGEENTYQAAV 102
           ++   D+ L   LI  W IW++RN +    +  +  TM QQ+++ +      E++YQ+  
Sbjct: 2   LDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFV-----TESSYQSET 61

Query: 103 RTRYNHNGDSERRPTWTPIPEGSWKLSCDATWNEAKMRGGVGWIFRDWRGMMVMAGYRSI 162
                H      +  W P P   W L+ DA+W+++  RGG+GWI R W G +V+AG R +
Sbjct: 62  SLSMLHK-TLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFV 121

Query: 163 NRPWKIQWLEALAICDGVRSIPS-SFQASVRVESDALQV 201
                ++ LEA AI +G+R++ +      + +E+D+ +V
Sbjct: 122 EACNNVKLLEASAILEGLRNLTNLGVLRPLHIETDSAEV 154

[Close]

BLAST of Spg030068 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 85.1 bits (209), Expect = 8.4e-13
Identity = 43/166 (25.90%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 43  MELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQQVSRAIEEYLGEENTYQAAV 102
           + ++ D+ ++ S+++ W+IW+ RNR     +  +++ + + +   I   + +        
Sbjct: 23  VNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSNIDKGTCISQTR 82

Query: 103 RTRYNHNGDSERRPT-------WTPIPEGSWKLSCDATWNEAKMRGGVGWIFRDWRGMMV 162
           R++ N       R         W+  P   WKL+ DA+W+E +  GG+GWI  D RG +V
Sbjct: 83  RSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWILCDCRGEIV 142

Query: 163 MAGYRSINRPWKIQWLEALAICDGVRSIPSSFQASVRVESDALQVV 202
           +AG   I    +I  LE + I  G++ I    ++ + +ESD+++V+
Sbjct: 143 LAGNCKIREKKEINALELMTIIRGLQFINMQSRSPIYLESDSVEVI 188

[Close]

BLAST of Spg030068 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.3e-15
Identity = 48/165 (29.09%), Postives = 78/165 (47.27%), Query Frame = 0


Query: 43  MELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQQVSRAIEEYLGEENTYQAAV 102
           M+   ++   RS+I+ W+IW+ RN+       P    +Q  + R I    G     +   
Sbjct: 1   MDKAGEEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKGKS 60

Query: 103 RTRYNH---NGDSERRPTWTPIPEGSWKLSCDATWNEAKMRGGVGWIFRDWRGMMVMAGY 162
             +  H     +      W P    SWKL+ +A W      GG+GWI RD +G ++ A  
Sbjct: 61  TNKDLHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASC 120

Query: 163 RSINRPWKIQWLEALAICDGVRSIPSSFQASVRVESDALQVVNEL 205
           R I     I +LE +AIC+G+R+I       + +ESD+L+ ++ L
Sbjct: 121 RIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIHLL 165

[Close]

BLAST of Spg030068 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-15
Identity = 56/201 (27.86%), Postives = 94/201 (46.77%), Query Frame = 0


Query: 23  LKKNGWAVPDYSEIFWKGEGMELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQ 82
           + +  W   +Y E  W    M+   ++   RS+I+  +IW+ RN+            +Q 
Sbjct: 164 IDRTNWTTKEYWE--WL---MDKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQL 223

Query: 83  QVSRAIEEYLGEENTYQAAVRTRY--NHNGDSERRPTWTPIPEGSWKLSCDATWNEAKMR 142
            + R I    G++   +   +  +     GD+  R  W P    SWKL+ DA W      
Sbjct: 224 AIDRYIINSAGQDTNLKRKSKDFHPIRRIGDN-TRARWKPPTSNSWKLNTDAAWRADTNT 283

Query: 143 GGVGWIFRDWRGMMVMAGYRSINRPWKIQWLEALAICDGVRSIPSSFQASVRVESDALQV 202
            G+GWI RD +G ++  G R I     I +LE +AIC+G+R+I       + +ESD+L+ 
Sbjct: 284 DGIGWILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEA 343

Query: 203 VNELVYFIKEAQSLLSLKIIG 222
           ++ L   +K     + LK+ G
Sbjct: 344 IHLLHRHVK-----IKLKLFG 353

[Close]

BLAST of Spg030068 vs. ExPASy TrEMBL
Match: A0A6J1DQC9 (uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-15
Identity = 56/199 (28.14%), Postives = 93/199 (46.73%), Query Frame = 0


Query: 25  KNGWAVPDYSEIFWKGEGMELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQQV 84
           +  W   +Y E  W    M+   ++   RS+I+  +IW+ RN+            +Q  +
Sbjct: 131 RTNWTTKEYWE--WL---MDKAGEEERRRSMIIACQIWEMRNKSIFKGVHSETRDIQLAI 190

Query: 85  SRAIEEYLGEENTYQAAVRTRY--NHNGDSERRPTWTPIPEGSWKLSCDATWNEAKMRGG 144
            R I    G++   +   +  +     GD+  R  W P    SWKL+ DA W       G
Sbjct: 191 DRYIINSAGQDTNLKRKSKDFHPIRRIGDN-TRARWKPPTSNSWKLNTDAAWRADTNTDG 250

Query: 145 VGWIFRDWRGMMVMAGYRSINRPWKIQWLEALAICDGVRSIPSSFQASVRVESDALQVVN 204
           +GWI RD +G ++  G R I     I +LE +AIC+G+R+I       + +ESD+L+ ++
Sbjct: 251 IGWILRDEKGEVIKTGCRIIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIH 310

Query: 205 ELVYFIKEAQSLLSLKIIG 222
            L   +K     + LK+ G
Sbjct: 311 LLHRHVK-----IKLKLFG 318

[Close]

BLAST of Spg030068 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.8e-14
Identity = 48/159 (30.19%), Postives = 85/159 (53.46%), Query Frame = 0


Query: 43  MELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQQVSRAIEEYLGEENTYQAAV 102
           ++   D+ L   LI  W IW++RN +    +  +  TM QQ+++ +      E++YQ+  
Sbjct: 2   LDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFV-----TESSYQSET 61

Query: 103 RTRYNHNGDSERRPTWTPIPEGSWKLSCDATWNEAKMRGGVGWIFRDWRGMMVMAGYRSI 162
                H      +  W P P   W L+ DA+W+++  RGG+GWI R W G +V+AG R +
Sbjct: 62  SLSMLHK-TLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFV 121

Query: 163 NRPWKIQWLEALAICDGVRSIPS-SFQASVRVESDALQV 201
                ++ LEA AI +G+R++ +      + +E+D+ +V
Sbjct: 122 EACNNVKLLEASAILEGLRNLTNLGVLRPLHIETDSAEV 154

[Close]

BLAST of Spg030068 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 4.1e-13
Identity = 43/166 (25.90%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 43  MELMDDQSLSRSLIVCWKIWDYRNRISHSNQIPNQETMQQQVSRAIEEYLGEENTYQAAV 102
           + ++ D+ ++ S+++ W+IW+ RNR     +  +++ + + +   I   + +        
Sbjct: 23  VNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSNIDKGTCISQTR 82

Query: 103 RTRYNHNGDSERRPT-------WTPIPEGSWKLSCDATWNEAKMRGGVGWIFRDWRGMMV 162
           R++ N       R         W+  P   WKL+ DA+W+E +  GG+GWI  D RG +V
Sbjct: 83  RSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGWILCDCRGEIV 142

Query: 163 MAGYRSINRPWKIQWLEALAICDGVRSIPSSFQASVRVESDALQVV 202
           +AG   I    +I  LE + I  G++ I    ++ + +ESD+++V+
Sbjct: 143 LAGNCKIREKKEINALELMTIIRGLQFINMQSRSPIYLESDSVEVI 188

The following BLAST results are available for this feature:

BLAST of Spg030068 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143535.1	6.9e-15	29.09	uncharacterized protein LOC111013412 [Momordica charantia]	[more]
XP_022154990.1	9.0e-15	27.86	uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]	[more]
XP_022154991.1	1.5e-14	28.14	uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]	[more]
XP_022155262.1	1.0e-13	30.19	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_022143317.1	8.4e-13	25.90	uncharacterized protein LOC111013216 [Momordica charantia]	[more]

BLAST of Spg030068 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg030068 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CP26	3.3e-15	29.09	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DL64	4.4e-15	27.86	uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DQC9	7.4e-15	28.14	uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DNV9	4.8e-14	30.19	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1CQG0	4.1e-13	25.90	uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Spg030068 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 130..204 e-value: 7.4E-9 score: 35.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030068.1	Spg030068.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity