Spg029945 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg029945
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Locationscaffold6: 8745015 .. 8749708 (+)
RNA-Seq ExpressionSpg029945
SyntenySpg029945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAGAAGTAAAAAACTCATCTTTTCATAGTTTATTCGAGCTTTGCTTCTCGCTCATCCAGAAATCTAGAGGGAGCCCCTCCATCATTCCCACTTCTAAGGATTCGTGAAAGTGCGCTTTCGTGGGTGTGTTGCATTTCAATGGTTCGATCCTAATGGGGAATCGAAACCCAATTTTTGAGTTGCAGAGATTTCGAAAACAATCAGCGTTGTACTAGGTTCAGAAAACATCGGGAAATGGAGCAACCTCGGGCAGATTTTTCGACGAGCATAGAAACTGAAAGTCAGATTCCGGGCATATCCCCTAATTCGACCATTCCCGAGTTGCCCACTTGTTCTGTCATTGAAGATTGCACCAAATCCCAACCTTCGTTGAGCCAGACCGAGATTTTCAAAGCCATTGAAGTCGTCGAAAAGGATTCTCTCGCCATAGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTCCGTTCGGCTCTCTCCGAGGTCTCATAGTTTTGGCATCCTATTTCTTTATGCCCCATTTTCATTTTGTGTGGTCGTGACATGCAGTATGAAGTTTTTGAAGTGAATTGCCCTGTTTTCCTGTTTGATTTCCAATAAATCGAACTTAATTAATAGCTTTAGTCTTTAACATTCTAATTCTGTCTTATCACTGTGATATTTTCCATCTTTAATTGGGTTGCTTTAATATATTGAAGATAGAACAAAACCACTATCTTAAAATTTTGAGTCTGACAACTCAACCATGATTTGATTGTCAATGGACAAGCCTAATTATATCCTTCAATAATGACTGAAGCTTCACCACTCTAGCATGAATTTCTGAAGAAAATGATTCTGGGTTTCCTCTTGTCAAGCAGTTTATCTGAGTGGAAATAGGATAATCTTGTAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAGCGATGCTGCAGGCCGCCTTCAAGAATCTGGTAAGTGGAAAAAAAAAATAGTATGATTGTGATTGATAGGAATGGCTGGCTGAGTATGATGGCAGTTTTGACGTGCTACTGTCGTCTATTACTACTACTACTCATCTGGGTATTTCTTCCTGTATTAATCAAAATTTGATCTGTTCATCATTTTGTTCATTGTTCTGGCTAAGATGTGGTAGTTGAGCTTAACAAGTTATTGCTTTGAGATTCACTGTTACGTAATCAGCCTTTGTGCCAGATTTTTGTATTAAATTTGGAAAGAGGTTGGTTGCTATCCGACTCATGAAGATAGAGAATGTCTTTAATATAAAACGTATATGCAAGGTGCACAAACTTTTAGCATTCGATAACTCTAGTCAGCTTGTATCCTTATGTGTATTCTAGCATAATAAAGGTCATTCTAGATACCTCATAACTTTTGTTAGTCATATCCACTGTTGTCTAAGGTTCCTCTTACTCCTACTATATTAACAAACAACTTTTTTTATTTGATGGCCTTTGACGTGAGTTCTTTTTGTTCTTTCAATCCTGTAGTGCTTGATGCGGCTACAAAGGGTAACCGATACATTAATTCTTCCTTGAGGTATGCTCCAATGCCTACTGGCATTTCCTTTGTTCTATGGAAATTGGAAAATAGTCATTGTCCTTTGTTTTATATTTTCAGGTCTTGACAAATTCACTGCTGAGTCTTGTCATTAATCATGATAGGACAAACATAATTATATTTTGGGTCCTTGAGATATAAGTTTCAATTTCGTGGATGACTGTATTTCTAAGAATAACAAATAACAAACATAAGTTAAATCTGAACTCAAAACTCCATTTGTCAAAATGTGATTGCTCTTTGGATGTTGTGGCTTTATCACAACCTGCTGCATAAAATGACTAACGGAAAAATTGGAACATGTGCTAGTCTAAGGGTTTCTGTACCAATAAGAAATCTATCAAAAGGGTCCAAAATTGAACCCAGCATGCGTTTCTACACAATTGCAGTAGATTGTTACTTTAGTAAATGAAGTTAGATGAGTGATGGTTACTTCAGAAGTTGACCTTTTTTTTATGTTCCTGATATGATGATAATTATGATGCGATAGATTTCTCTAGCATATGCTAGTAGGTAACTAAGTAATGATAGATTGAATCTCTTGCTAGTTATATGAATTGAAGTCTTTATTCTGAAAAGATTATTAGGAAATGGAAGAGTGAGATAAACAGAGAGGTTCTGACTTTGGAGAAATATTTATTATTGTAATAAACAAAATTTCAATGTAGACGCTTTGAGAAACTGTTTGGTGTATGTTTTTGTTATACGGGGAGTAATTCCTCATTATGGATCCTTTGTCAGCTGGGTTGTGTTCATTGTTTTTTGAGTTCGGAAAAGTTTTGTGGTTACTTCAATGGATGCTGGATGGCAGTCTCAGGCTTCAAATTTGCATATTCATCATATTCAACTCTCTTTGTTGTTATCTGATGGGGACATAAGATTTTGGAAATTTGATATTGCCATAAGCACAAGGGTTTGACATAATTTCAGCACGATTTTTTTTTTGTGCAACATTTCTTCTGTTTTTGGTTTTGTTTTGGCCATTCTAGTTGCAAAGTTCAATATATTGGATGTTTGTCCCATTAGAGATTAATATGAGATTAGTTCATAACACATCAATATGTCTTTTTATTCATATGAATTATGACTCGACTTCGTTGTTTCACCAGTCAACTTTAGGTTACCAGTGTTCAAGAAGAGGCTTTTAGGACCTTGAGGCGAGTCACAAATTTCCAGCCTCAAGGCTTTCACTTCTGACACTACATATCATGGGTTGTGATAATTTAGCCTATTACTAATTTTACCTCTCAAGTTATAGTTACAATGAAAACGAAAGTTATACTGATCAGCGATAATATATATTCTTTATGATAACAAGAATCAATACATCAAATAGAAAGCTAACTTTAGCATAGCTAAACTGGCTAAGGCGTATACCCTTGACCAAAAGGTTATGGTTTGAATCCCCATGTTGAACTAAAAAAAAATCAAATAGAAAGAGAGTAACATTAAGGGAGGAAGGACAAACCTCCCAACTAGCCAAAAGAGTTATTGGAAAAATTGAGTGTTAAAGTAGTCAACTACACAGATGATTTCTGGAGACATCTGCCACTTGGAAGCAAATGGACCTGAAAGTAGAAGCAAAAGAATAAGAGGAAAAAAGATGATCCAATGTTTTCTCATCGTTTTGGCAAAGAATATACTAAGTAGGGGACAAAAGAGTAGCAAGATTTGGATTCTTCTCATCTATTCTATTCTATCCATAGTATTGATATTGTGTTTGGAAAGTTTCCAAAAGGAGAATCTAACCTTTTTAGGTATCTTCCACACGCAGACGAAACTTTGGAATATCCTTTGGAAGACATTGGATTCTGCTATGTAAATGCATGAACAAGGAAGAGCAAGAGCAAGAGAGTAGGCCAGAGGTTTCAGGGTACAAGTTCTAGAGTTACTAGGTCGAACATCTCTGTCAATGAGATTAGCCTAGTTCATTTCTCTGATTCAAAACCATTAAGTTCTCTTTTCAAATGGCAAGGTCTTACTCCCTTAAGTTCCATTATACAAGTCTTTTATTCTCTCTGATGAAGATTAGTAAAAGTGTAACACAATTTTACATTTTTAAGATTCTCATCAACGTTTTTCTGTTTAAATTGAGGCCTGCACCTTTAAACCATCTTGAGGATCATGATTAGGATGGCCTAATATTTGATGTAACAGGGGAAAAAACACTGATCATGCTTCAATGAAGTCCACAGAAATTGTATAGACTTGTATCTGTGTATTTCTTCAATATCTCTACAATGGCCCATAGATAATTACTGTGGTTGAATTGTGTCTGTCTTGTGACCCTAGATGCTGTAACTTTGGACTCTATTTTCTTTGTTTTGCAGATTGAATCAGGAAATGAAAGGCATTGACAATCTAGCTGTTCAGCTGTATCCTTTCTACTTCTAGTGCTATAGCTCGAACTTGAACATGCTAATATTTCTTTATCTAGTTTCCCTTAGTCCTATGCATTACCCAATTCCTTAATTCTTGCTTAGAAAGGTTTTGAGGAAGAACGTCGATGCTCTAGACTTGGCTGTGAACAAGCTCCTCAATTTTCCGTGAGCTCGGCTCGGTCGTAGTTCTTGCAAGGTCAAGGATTGTTGTTTCGTTAGACTGCCACAATACAGTTCATTAAGAAAAAAAATTCATTCCATAGTTTCCTTAACATTTTTCTCTGGGAAGCATCTCATTGCATGTTGGGCTCTTTGATGTATTTATTTAGAGGGATGAGTAATTTTTTCTTCATCGTTTAGTGATATACTGGACTCTCTCAATAACCAATGTCTTCTCTTCTTCAGAGGATGCTATCCAGCTTTTGAGGGTTGCCCTCATAATGGAGGAGTGATTGATGAATAAAAAATCAACCATTTAGACAATTCTCCTTTAAACACCAAAAGTGGAGGAATTTTTAAAGAGATTAGTCACGTGCAATTTTTTTTTTTTTTTTTTTTTTTTGGGGTTAATATTAAACTCCAAGAGTAAATAATCTTGCTTACACTTTATTAATGAAGCAAGCCTTTAAATAGGCACCAAAGATTACAATAGGCAGTTAGCTAATTGATAACAACCATAACAGTATGAACTAACTGATAACTAACTGCACTTAACTAGAACTAATTACAAGCTCTTGTTATCCTAATA

mRNA sequence

ATGGAGCAACCTCGGGCAGATTTTTCGACGAGCATAGAAACTGAAAGTCAGATTCCGGGCATATCCCCTAATTCGACCATTCCCGAGTTGCCCACTTGTTCTGTCATTGAAGATTGCACCAAATCCCAACCTTCGTTGAGCCAGACCGAGATTTTCAAAGCCATTGAAGTCGTCGAAAAGGATTCTCTCGCCATAGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTCCGTTCGGCTCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAGCGATGCTGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCTACAAAGGGTAACCGATACATTAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATTGACAATCTAGCTGTTCAGCTGTATCCTTTCTACTTCTAG

Coding sequence (CDS)

ATGGAGCAACCTCGGGCAGATTTTTCGACGAGCATAGAAACTGAAAGTCAGATTCCGGGCATATCCCCTAATTCGACCATTCCCGAGTTGCCCACTTGTTCTGTCATTGAAGATTGCACCAAATCCCAACCTTCGTTGAGCCAGACCGAGATTTTCAAAGCCATTGAAGTCGTCGAAAAGGATTCTCTCGCCATAGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTCCGTTCGGCTCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAGCGATGCTGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCTACAAAGGGTAACCGATACATTAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATTGACAATCTAGCTGTTCAGCTGTATCCTTTCTACTTCTAG

Protein sequence

MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGIDNLAVQLYPFYF
Homology
[Close]
BLAST of Spg029945 vs. NCBI nr
Match: KAG7015189.1 (hypothetical protein SDJN02_22822 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.4 bits (581), Expect = 3.8e-56
Identity = 118/141 (83.69%), Postives = 126/141 (89.36%), Query Frame = 0 

Query: 1   MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEK 60
           MEQ  +D S+SIE   QIP  SPNS IPE PTCSV+EDCT+ + SLS TEIFKAI+VVEK
Sbjct: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRS LSEVTSNSIDHMHCF+DAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAVQLYPFYF 142
           RLNQEMKG+DNLA QLYPFYF
Sbjct: 121 RLNQEMKGMDNLAAQLYPFYF 141

[Close]
BLAST of Spg029945 vs. NCBI nr
Match: XP_022136587.1 (uncharacterized protein LOC111008257 isoform X1 [Momordica charantia])

HSP 1 Score: 226.1 bits (575), Expect = 1.9e-55
Identity = 119/139 (85.61%), Postives = 126/139 (90.65%), Query Frame = 0 

Query: 1   MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEK 60
           M+Q RADFST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEK
Sbjct: 1   MDQARADFSTKI--DSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRSALSE + NSIDHMHCFSDAAG LQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAVQLYPF 140
           RLNQEMKGIDNLA QLYPF
Sbjct: 121 RLNQEMKGIDNLAAQLYPF 137

[Close]
BLAST of Spg029945 vs. NCBI nr
Match: XP_022136588.1 (uncharacterized protein LOC111008257 isoform X2 [Momordica charantia])

HSP 1 Score: 218.4 bits (555), Expect = 4.0e-53
Identity = 116/136 (85.29%), Postives = 123/136 (90.44%), Query Frame = 0 

Query: 1   MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEK 60
           M+Q RADFST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEK
Sbjct: 1   MDQARADFSTKI--DSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRSALSE + NSIDHMHCFSDAAG LQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAVQL 137
           RLNQEMKGIDNLA QL
Sbjct: 121 RLNQEMKGIDNLAAQL 134

[Close]
BLAST of Spg029945 vs. NCBI nr
Match: XP_023553161.1 (uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217.2 bits (552), Expect = 8.8e-53
Identity = 114/136 (83.82%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 1   MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEK 60
           MEQ  +D STSIE   QIP  SPNS IPE PTCSV+EDCT+ + SLS TEIFKAI+VVEK
Sbjct: 1   MEQSPSDSSTSIEPGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRS LSEVTSNSIDHMHCF+DAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAVQL 137
           RLNQEMKG+DNLA QL
Sbjct: 121 RLNQEMKGMDNLAAQL 136

[Close]
BLAST of Spg029945 vs. NCBI nr
Match: XP_022984532.1 (uncharacterized protein LOC111482798 [Cucurbita maxima])

HSP 1 Score: 216.1 bits (549), Expect = 2.0e-52
Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 0 

Query: 1   MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEK 60
           MEQ  +D S+SIE  SQIP  SPNS IPE PTCSV+EDCT+ + SLS TEIFKAI+VVEK
Sbjct: 1   MEQSPSDSSSSIEAGSQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL 120
           +SLAIAESFTSLFASLRS LSEVTSNSIDHMHCF+DAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  NSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAVQL 137
           RLNQEMKG+DNLA QL
Sbjct: 121 RLNQEMKGMDNLAAQL 136

[Close]
BLAST of Spg029945 vs. ExPASy TrEMBL
Match: A0A6J1C5W4 (uncharacterized protein LOC111008257 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008257 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 9.2e-56
Identity = 119/139 (85.61%), Postives = 126/139 (90.65%), Query Frame = 0 

Query: 1   MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEK 60
           M+Q RADFST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEK
Sbjct: 1   MDQARADFSTKI--DSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRSALSE + NSIDHMHCFSDAAG LQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAVQLYPF 140
           RLNQEMKGIDNLA QLYPF
Sbjct: 121 RLNQEMKGIDNLAAQLYPF 137

[Close]
BLAST of Spg029945 vs. ExPASy TrEMBL
Match: A0A6J1C7Z8 (uncharacterized protein LOC111008257 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008257 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-53
Identity = 116/136 (85.29%), Postives = 123/136 (90.44%), Query Frame = 0 

Query: 1   MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEK 60
           M+Q RADFST I  +SQIPG SPNST+ E+PTCSV+ED TKS+P L QTEIFKAIEVVEK
Sbjct: 1   MDQARADFSTKI--DSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRSALSE + NSIDHMHCFSDAAG LQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAVQL 137
           RLNQEMKGIDNLA QL
Sbjct: 121 RLNQEMKGIDNLAAQL 134

[Close]
BLAST of Spg029945 vs. ExPASy TrEMBL
Match: A0A6J1J2E9 (uncharacterized protein LOC111482798 OS=Cucurbita maxima OX=3661 GN=LOC111482798 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.5e-53
Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 0 

Query: 1   MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEK 60
           MEQ  +D S+SIE  SQIP  SPNS IPE PTCSV+EDCT+ + SLS TEIFKAI+VVEK
Sbjct: 1   MEQSPSDSSSSIEAGSQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL 120
           +SLAIAESFTSLFASLRS LSEVTSNSIDHMHCF+DAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  NSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAVQL 137
           RLNQEMKG+DNLA QL
Sbjct: 121 RLNQEMKGMDNLAAQL 136

[Close]
BLAST of Spg029945 vs. ExPASy TrEMBL
Match: A0A6J1EUG1 (uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC111437668 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.5e-53
Identity = 113/136 (83.09%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 1   MEQPRADFSTSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVEK 60
           MEQ  +D S+SIE   QIP  SPNS IPE PTCSV+EDCT+ + SLS TEIFKAI+VVEK
Sbjct: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRS LSEVTSNSIDHMHCF+DAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAVQL 137
           RLNQEMKG+DNLA QL
Sbjct: 121 RLNQEMKGMDNLAAQL 136

[Close]
BLAST of Spg029945 vs. ExPASy TrEMBL
Match: A0A0A0KWT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.4e-49
Identity = 114/137 (83.21%), Postives = 119/137 (86.86%), Query Frame = 0 

Query: 1   MEQPRADFS-TSIETESQIPGISPNSTIPELPTCSVIEDCTKSQPSLSQTEIFKAIEVVE 60
           MEQ  AD S TSIETE QIP  SPNST     T SVIEDCTK+Q SLSQ +I KAIEVVE
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60

Query: 61  KDSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAGRLQESVLDAATKGNRYINSS 120
           KDSLA+AESFTSLFASLRS LSEVTSNSIDHMHCF+DAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGIDNLAVQL 137
           LRLNQEMKG+DNLA QL
Sbjct: 121 LRLNQEMKGMDNLAAQL 132

[Close]
BLAST of Spg029945 vs. TAIR 10
Match: AT4G23330.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). )

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30
Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 0 

Query: 41  KSQP-SLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAG 100
           +S+P SL+Q EI K +  VEKDS AIAESF+SLF SLRS LSE T +S+DHM CF +AAG
Sbjct: 30  RSEPSSLNQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAG 89

Query: 101 RLQESVLDAATKGNRYINSSLRLNQEMKGIDNLAVQL 137
           RLQE+ LDAATKGNRYINS LRLN+E+KG++NLA +L
Sbjct: 90  RLQENALDAATKGNRYINSCLRLNEEIKGVENLAARL 126

[Close]
BLAST of Spg029945 vs. TAIR 10
Match: AT4G23330.1 (BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 8.3e-25
Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = 0 

Query: 41  KSQP-SLSQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEVTSNSIDHMHCFSDAAG 100
           +S+P SL+Q EI K +  VEKDS AIAESF+SLF SLRS LSE T +S+DHM CF +AAG
Sbjct: 30  RSEPSSLNQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAG 89

Query: 101 RLQESVLDAATKGNRYINSSLRL 123
           RLQE+ LDAATKGNRYINS LRL
Sbjct: 90  RLQENALDAATKGNRYINSCLRL 112

The following BLAST results are available for this feature:
BLAST of Spg029945 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015189.13.8e-5683.69hypothetical protein SDJN02_22822 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022136587.11.9e-5585.61uncharacterized protein LOC111008257 isoform X1 [Momordica charantia][more]
XP_022136588.14.0e-5385.29uncharacterized protein LOC111008257 isoform X2 [Momordica charantia][more]
XP_023553161.18.8e-5383.82uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo][more]
XP_022984532.12.0e-5283.09uncharacterized protein LOC111482798 [Cucurbita maxima][more]
BLAST of Spg029945 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg029945 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C5W49.2e-5685.61uncharacterized protein LOC111008257 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C7Z81.9e-5385.29uncharacterized protein LOC111008257 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1J2E99.5e-5383.09uncharacterized protein LOC111482798 OS=Cucurbita maxima OX=3661 GN=LOC111482798... [more]
A0A6J1EUG19.5e-5383.09uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC1114376... [more]
A0A0A0KWT26.4e-4983.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1[more]
BLAST of Spg029945 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23330.21.0e-3069.07unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G23330.18.3e-2571.08BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation fa... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR39708OS07G0483400 PROTEINcoord: 37..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg029945.1Spg029945.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane