Spg029922 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg029922
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold6: 9432337 .. 9437558 (-)
RNA-Seq Expression	Spg029922
Synteny	Spg029922

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGCAAACAATATATACTGTCCATTCTGCGCGACAGCGTCGAGACGCTAAGGACACAGCGTCGCGACGCTGTCGCGCGCGTGCCCTAATTATTTTAGGAAAGTTCGCAGCGTCGAGACGCTGTGGAGGTAGCGTCTCGACGCTGCCTCCATTCGCGCGCCTCCTGACTTATACCTAGCGTTGAGACGCTCCAAGGGCTAGCGTCTCAACGCTAGGCCCAAAATTTCTCTTCCTTTGCTGTTTTCTTGGCTCGAACTTATTCTTTAGCTCCTAAATCACCGGTAATGTTAAAAAACGTCGATTTCCATTGAAATGCTTGATTCCTACAAAACAAAACCAAATAGAGATAAAAATGCCCAAATAATACTCGAGACTAACGATAAAATCATATAAAATATAGCACAATAAATTGCGCTATCACATATTAGTGCGCAAGTGGCCTTTGTAGTCAAAATTGTGATGCTTGTTGATGTTAGATAACTCTAAGATATGTATTTGAATGTACGTTTTTGAGAATCATCTTTCTCGGGATGACTTTTTTGACTCGCAATGTGGGTTAATTAGATAAATTCTCTGGAATTAGAATTAATAAACATTGCCCTACAATAACTCATCTTTTTTTTTTTTTTTGCAGATGACAGCTTGGCGTTCTTCAATACCTCGAAGAAAGAGGGATAGTGTATCATGAAGATTCTTCATTCGTATGAGCTAGCTTCAGGACAGAAAATCAACCTTGACAAATCCCTATGTTTAATCAGCAAGAATATTATCGTGTCCAAAGCGGCCGAGATAAGTAAGGAGCTTGGGGTCACTAAATCTGAGTCTATTGGGCACTACTTAGGTCTCCCAGCTCAAACTGGTAGACATAAGGGGATTATGTTCAGTAGGCTCAAAGAAAGGGTTTGGAAAGTGCTCCAAAGTTGGAAGGAGAAGCTTTTCTCGGTGGGAGGGAAAGATGTGTTTATTAAAGCCATAGCCCAAGCTATCCCGCTGTATACCATGAGTTGTTTTAAGATCCCTAAATCTATTTGTGAGGAGATCAATAAGGTTTGTGCTAAATTCTTGTAGGGAGCTTCGAATGGCAAAAGAAGAGCACACTGGGCTAGTTGGAAGAAGTTAATGTTTAAGTAAAGATGAGGGTGGCATGGGGTTTAGGGATCTTGAGTTGTTTAACAAAGCTATGTTGGCCAAAATTAGCTGGAGAATATTAAAGAATCCTGGAAGCCTCATGGCCCGTGTTCTAAGAGGCAAGTACTTTAGCGGGAGCACCTTCCCCAAAGCTAAAGCCAATGGGAATTCTTCTATTGTGTGGAAAAGTATCGTGTGGGGGAGAGATCTCTTCAAGGTGGGCTACAGATGGAAAGTAGGTGATGGGAGGCAAGTGTACATCGAAGAAGGCCCTTGGATGATGGATGATGGGAACTAGAAACCTATTAGAGTCGATGAGAACCTTAAAGGTAAAAGAGTGGTGGAGCTCATTCAAGAGGACGGGAATTGGAAAGAAGATCTGATAAGGAACTCTTTCATTCGGAGTAGGTGATGGGAGGCAAGTGTACATCGAAGAAGGCCCTTGGATGATGGATGATGGGAATTGGAAACCTATTAGAGTCGATGAGAACCTTAAAGGTAAAAGAGTGGTGGAGCTCATTCAAGAGGACGGGAATTGGAAAAAAGATCTGATAAGGAACTCTTTCATTCGGAGTGATGCAGAGATTATTCTTAATATTCCCAAGAGAAACATTTCAAAAGAAGACGAGATTATTTGGGGGAAGGATTCTAAAGGCTTATTTTCGGTTAAAAGTGCTTATCGCACTACAGTCCTCGCGGATAATTGAAATTCAGCTTCGGGATCAGATTTTTCTTCTTCCAAAAAGCTTTGGAGGTCTATTTGGCAGTTGGATTGCTGGCCAAAAGTTAAAATTAATCTCTGGAAAGCGATGAATGATGTGCTGGCCACAGTAGAGAGTATTAAAAAAAGAGGAATTGACTCTAACGAGCTGTGTTTCTTGTGCAGGAACAGGCCAGAGGATGTGGAACATTTGTTTTGGAATTGCAAATGGGTTAGGAAACTTTGGGGATCCCTTATTCCTAATTCTGAAGCAATTTTTTCTATATGCAGGGGCTGGTGGAGATTTAAAGATTATTGGGAAGCTTTGTCCAGGATCCTGGATCTTCAGAAAGCGAGGACAGCGTGTAATCTAATTTGGGCGATTTGGAACAAAATGAATCAATTGAAGAATTCCAAAAGTAGAGCAGATTAAGTGCAATCCATTGCAGATATTACATGTGCGGTTCAAGAGGATAAAAAGTACCAGTTGAGTTCGCCGGAGACCCAGCTGAGTCATGGTGTCTGGAAGCCTCCCGATGGTCTTCTGTGGAAGATGAATGTGGACGCCGCCTGGTTTGACGCTTCAAGCTCCGGTGGAGTGGGCTGGCTTATTCGCGACTCAGCCGGTTCTTTGGTCGGAGCTGGCTGCAAAAAGATCTCGAGGAAATCAGAGATCAAAATGTTAGAATCATTGGCGATTTTAGAAGGCATAAACCAGTTTACAACAAACGGTCTTCTTACCCCGGATTTTCTTAGTCACAATCTGGTTATTGAATCGGACGCCGCCACAGTAGTGAAGCTAATTAATCGAGAAGCGGAGGACTTATCTGAAATCTCCCTTCTGATCGACGAGATTCAGGTCCAAGCGACTCGCGCCAATGTGGTTGAGTTCGTCTTTAGCCCGAGAAACACACATTTTTTGGCTCACTCCCTTGCGCGCGCTGCTGCTCATTTCAGCGATTTCGTTTTCTTTCCTTTTGATCCTTCTCTGTGCTTGAGAATGGATGAGTCGATTTCCGAAGGCGTGTGGCCTTCGCGATTTTTTTTCGATTTTGGAGGGCTTGTTTTGTGTAACGAACGTTTTATCTCCTTCGTGAGTTCTTTTTATATATTTTTTTTTTTTAAAAAAAAAAAAAGAACAATACTTTTCTATACACAGCAATCAATAGCAGTCAACTTTCCCATACAGTATATTTTCATGAGTCTATTTCTATTACATTTTGTAAATAAACATGTTTCACTAACTAAAAATTATATACAATGTTAGAAGAGTTAGGGGGTGTTTGGGGCACTGAATAGGTTATAATAAGGTTATAATAACCCCCTTTATTATAACCTATTCAGTGTTTGGGGCATAAACAAAAATAAATTGTGAGGTGGGTTATTTTTACCCCCGATTATTTTATTAATTCTCTACAGTAACCATCATTCAACCCACTCGATTATTCTATCCATTTTCTACAGTAACTCTCTCATCTCTTCTTCCATGCGACTCCTTGACTTTTCCGACGACCGGCGAAGTTTCCGACGGCTGCCGACGACTTTTCTGGCGATCGCCAACGAATTTCCCGGCCACCGATTTTTTTTCTTTTTTTTTTTTCATATTTCTTCTCATTTTCATTTTGAAAAATATAAAAAATGAAAATAAAGAAAAAAAATCGAAGGTTGCCGGAAAAGTCATTGACACCATCGAAGGTTAACCAACTTAAAAAAAAAAAAAGAACATTCAACACACTCAAGTTTATTTCAAATGATTTTTTTTTTTTGAAAATTTATTTCAAATGATTTTATTGATTAAAAAAAAACTAAAAACTAATATGATTTTTGAACTAAACATTTACAATTTTTATTTTGGCAATACTAAAAGTTAACTAATATGATTTTTCTATACCAAATCCTAAACTTTTTTGTTTTGTAAAAAAAAAAAACATAACCCTAAAGTGAATCGTATATCATATAAAAAAAAAAAAAAAAACTAGAAAAAAAAACAGTCAGTTTGAAACTTTGATTCAGAACCCCATGTTAAAACAGATCAGCACTCCAAACACAGATTATTTTATCCCAGACTAAAATAATCTGCACTCCAAATACAGATTATTATAACTCCCAGACTATTATAATCCCCAGATTATTATAACCAATTCAGCGCCCCAAACAGTCACTTAGTATATATGGACTCCTATAGCCTTTTGAGTTTGAAGAGTATTAAATGACCTGGCCCAAGAATGACATAAATAGACCGACTTTGAACCCAACTAATCATTGAAAAAAAAAAGTACTGAACAAAATGAAAGATAAAAATAATAAATTACTACGATCACTTAATTTTATTGATGATAACATCACTCCAAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAGTTCCAATCTTAATATATATATATTTTTTGAAAAATCTCCAATCTTAATATATTGAACAAATAGTAGAAGATAGTGAAATGTTTGTTTACTTGTGACCTAAGCAGAACCTGAATTTATAATACAAAAAAAAAAAGAAAAAAAAAAGTGACTGTTTGGTGGTAAGTTGAAATATAAAATCAATTTTTCAATGTTGTAATTTTTATAAAATTAATCACACTCGACTACTTGAGGTTAAATCAATAATTAATTATAACCACACTTGAAACCGAGAGACAGGTAGCCGGCCCTCACTCTCTTTTGTTCAATTAATATCATTATTTTTAATCTTCATGTTTGACATTCATTTATCAATACAAAATTAAGTATCCCCACCTGTGTATTGATTTTAAACTTTGAATAAAGTAAAGATCGTTTTTTTAAACAAAAAAGAAAAAAAGTAAATATATATATATATATATATATATATATATATATATATATATATATATTTTGGAGTTCATCAACATTTGGGGGTAGAGGGATACTTTAAATATTAGTAAATATTAGTTTATATATAAAGATACTTTAACTACTTGTGATCATAATTTATTTAAAGAGAATATTATTAGTACCAATCTAAAAATAACTCAACTGATTATATCTTCGACTAAGAGGTTAAATATTTTAATCCTCCTCTTTGACCTAAAAAAAAACTTTATTCGAAAAGAATATTGTTGATGGTCAAATTTGGCCAAGCACTCAGCCTGACTTCCACGTGACACCAGTAGTGAATTTGTTTGAGGGGGGAAGATGTGACTTGCAAGACAAAGTAAATCTGCACACCGGTGTGGTGCTTGTTACACTGCCTCCGATGTCTAAGTCAGCAAGGAGTAAGGTGAGAGAGCAAGAGAAGGAGTCGAGTCCAGAGAATAGAGTCCGGGTTCTCTTCTTCAATGACGAAGAAGGGTTTATATACATATTCCTGCCTTTGGGTTTCTAG

mRNA sequence

ATGGCATCGCAAACAATATATACTGTCCATTCTGCGCGACAGCGTCGAGACGCTAAGGACACAGCGTCGCGACGCTGTCGCGCGCGTGCCCTAATTATTTTAGGAAAGTTCGCAGCGTCGAGACGCTGTGGAGGTGATGGGAGGCAAGTGTACATCGAAGAAGGCCCTTGGATGATGGATGATGGGAATTGGAAACCTATTAGAGTCGATGAGAACCTTAAAGGTAAAAGAGTGGTGGAGCTCATTCAAGAGGACGGGAATTGGAAAAAAGATCTGATAAGGAACTCTTTCATTCGGAGTGATGCAGAGATTATTCTTAATATTCCCAAGAGAAACATTTCAAAAGAAGACGAGATTATTTGGGGGAAGGATTCTAAAGGCTTATTTTCGGTTAAAAGAACAGGCCAGAGGATGTGGAACATTTGTTTTGGAATTGCAAATGGGTTAGGAAACTTTGGGGATCCCTTATTCCTAATTCTGAAGCAATTTTTTCTATATGCAGGGGCTGGTGGAGATTTAAAGATTATTGGGAAGCTTTGTCCAGGATCCTGGATCTTCAGAAAGCGAGGACAGCATATTACATGTGCGGTTCAAGAGGATAAAAAGTACCAGTTGAGTTCGCCGGAGACCCAGCTGAGTCATGGTGTCTGGAAGCCTCCCGATGGTCTTCTGTGGAAGATGAATGTGGACGCCGCCTGGTTTGACGCTTCAAGCTCCGGTGGAGTGGGCTGGCTTATTCGCGACTCAGCCGGTTCTTTGGTCGGAGCTGGCTGCAAAAAGATCTCGAGGAAATCAGAGATCAAAATGTTAGAATCATTGGCGATTTTAGAAGGCATAAACCAGTTTACAACAAACGGTCTTCTTACCCCGGATTTTCTTAGTCACAATCTGGTTATTGAATCGGACGCCGCCACAGTAGTGAAGCTAATTAATCGAGAAGCGGAGGACTTATCTGAAATCTCCCTTCTGATCGACGAGATTCAGGTCCAAGCGACTCGCGCCAATGTGGTTGAGTTCGTCTTTAGCCCGAGAAACACACATTTTTTGGCTCACTCCCTTGCGCGCGCTGCTGCTCATTTCAGCGATTTCGTTTTCTTTCCTTTTGATCCTTCTCTGTGCTTGAGAATGGATGAGTCGATTTCCGAAGGCGTGTGGCCTTCGCGATTTTTTTTCGATTTTGGAGGGCTTGTTTTGTGTAACGAACGTTTTATCTCCTTCCCTGACTTCCACGTGACACCAGTAGTGAATTTGTTTGAGGGGGGAAGATGTGACTTGCAAGACAAAGTAAATCTGCACACCGGTGTGGTGCTTGTTACACTGCCTCCGATGTCTAAGTCAGCAAGGAGTAAGGTGAGAGAGCAAGAGAAGGAGTCGAGTCCAGAGAATAGAGTCCGGGTTCTCTTCTTCAATGACGAAGAAGGGTTTATATACATATTCCTGCCTTTGGGTTTCTAG

Coding sequence (CDS)

ATGGCATCGCAAACAATATATACTGTCCATTCTGCGCGACAGCGTCGAGACGCTAAGGACACAGCGTCGCGACGCTGTCGCGCGCGTGCCCTAATTATTTTAGGAAAGTTCGCAGCGTCGAGACGCTGTGGAGGTGATGGGAGGCAAGTGTACATCGAAGAAGGCCCTTGGATGATGGATGATGGGAATTGGAAACCTATTAGAGTCGATGAGAACCTTAAAGGTAAAAGAGTGGTGGAGCTCATTCAAGAGGACGGGAATTGGAAAAAAGATCTGATAAGGAACTCTTTCATTCGGAGTGATGCAGAGATTATTCTTAATATTCCCAAGAGAAACATTTCAAAAGAAGACGAGATTATTTGGGGGAAGGATTCTAAAGGCTTATTTTCGGTTAAAAGAACAGGCCAGAGGATGTGGAACATTTGTTTTGGAATTGCAAATGGGTTAGGAAACTTTGGGGATCCCTTATTCCTAATTCTGAAGCAATTTTTTCTATATGCAGGGGCTGGTGGAGATTTAAAGATTATTGGGAAGCTTTGTCCAGGATCCTGGATCTTCAGAAAGCGAGGACAGCATATTACATGTGCGGTTCAAGAGGATAAAAAGTACCAGTTGAGTTCGCCGGAGACCCAGCTGAGTCATGGTGTCTGGAAGCCTCCCGATGGTCTTCTGTGGAAGATGAATGTGGACGCCGCCTGGTTTGACGCTTCAAGCTCCGGTGGAGTGGGCTGGCTTATTCGCGACTCAGCCGGTTCTTTGGTCGGAGCTGGCTGCAAAAAGATCTCGAGGAAATCAGAGATCAAAATGTTAGAATCATTGGCGATTTTAGAAGGCATAAACCAGTTTACAACAAACGGTCTTCTTACCCCGGATTTTCTTAGTCACAATCTGGTTATTGAATCGGACGCCGCCACAGTAGTGAAGCTAATTAATCGAGAAGCGGAGGACTTATCTGAAATCTCCCTTCTGATCGACGAGATTCAGGTCCAAGCGACTCGCGCCAATGTGGTTGAGTTCGTCTTTAGCCCGAGAAACACACATTTTTTGGCTCACTCCCTTGCGCGCGCTGCTGCTCATTTCAGCGATTTCGTTTTCTTTCCTTTTGATCCTTCTCTGTGCTTGAGAATGGATGAGTCGATTTCCGAAGGCGTGTGGCCTTCGCGATTTTTTTTCGATTTTGGAGGGCTTGTTTTGTGTAACGAACGTTTTATCTCCTTCCCTGACTTCCACGTGACACCAGTAGTGAATTTGTTTGAGGGGGGAAGATGTGACTTGCAAGACAAAGTAAATCTGCACACCGGTGTGGTGCTTGTTACACTGCCTCCGATGTCTAAGTCAGCAAGGAGTAAGGTGAGAGAGCAAGAGAAGGAGTCGAGTCCAGAGAATAGAGTCCGGGTTCTCTTCTTCAATGACGAAGAAGGGTTTATATACATATTCCTGCCTTTGGGTTTCTAG

Protein sequence

MASQTIYTVHSARQRRDAKDTASRRCRARALIILGKFAASRRCGGDGRQVYIEEGPWMMDDGNWKPIRVDENLKGKRVVELIQEDGNWKKDLIRNSFIRSDAEIILNIPKRNISKEDEIIWGKDSKGLFSVKRTGQRMWNICFGIANGLGNFGDPLFLILKQFFLYAGAGGDLKIIGKLCPGSWIFRKRGQHITCAVQEDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAILEGINQFTTNGLLTPDFLSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANVVEFVFSPRNTHFLAHSLARAAAHFSDFVFFPFDPSLCLRMDESISEGVWPSRFFFDFGGLVLCNERFISFPDFHVTPVVNLFEGGRCDLQDKVNLHTGVVLVTLPPMSKSARSKVREQEKESSPENRVRVLFFNDEEGFIYIFLPLGF

Homology

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BLAST of Spg029922 vs. NCBI nr
Match: XP_024033483.1 (uncharacterized protein LOC112095606 [Citrus clementina])

HSP 1 Score: 110.9 bits (276), Expect = 3.1e-20
Identity = 98/381 (25.72%), Postives = 157/381 (41.21%), Query Frame = 0


Query: 45  GDGRQVYIEEGPWMMDDGNWKPIRVDENLKGKRVVELIQEDGNWKKDLIRNSFIRSDAEI 104
           GDG+++ I +  W+     +KPI      +   V ELI E+  W +  I   F R DA+ 
Sbjct: 305 GDGQKIQIHKDNWIPKPSTFKPIVRPSLPEDTLVAELINEENQWDESQIYRHFNRMDADK 364

Query: 105 ILNIPKRNISKEDEIIWGKDSKGLFSVK------------------RTGQRMWNICFGIA 164
           I+ IP     KED IIW  D KGL+SVK                   +G+  WNI + +A
Sbjct: 365 IVEIPLPRSPKEDTIIWHYDKKGLYSVKSGYQTALSLKFPAMPLSSMSGKNQWNIIWTLA 424

Query: 165 --------------------------------------NGLGNFGDPLF----------L 224
                                                  G+ N    L           L
Sbjct: 425 LPEKIRIFAWRAAKNILPSAENLWKRKIIQEPTCQVRKLGVENVFHALVECKAARKIWKL 484

Query: 225 ILKQFFLYAGAGGDLKIIGKLCPGSWIFRKRGQHITC--AVQEDKKYQLSSPETQLSHGV 284
            L +  +   AG ++   GK      +  K    +     +Q+ ++ ++ S + Q +  V
Sbjct: 485 TLLENDIMQTAGNEMLFKGKRENPQALVAKAEAVMEAYKRIQKPEQARMESQQVQ-AQQV 544

Query: 285 WKPPDGLLWKMNVDAAWFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAIL 344
           W PP     K+NVDAA        G+G +IRD  G+++ A  K      ++   E+ A+ 
Sbjct: 545 WNPPQSGFVKVNVDAATSSEKHLAGLGAIIRDDRGNVIAAAIKISKFHGDVSFAEAEALE 604

Query: 345 EGINQFTTNGLLTPDFLSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANV 358
            G+        +  +  +  L++ESDA +VV L+N +    SEI  +I EIQ      ++
Sbjct: 605 WGLQ-------IARNASTKALIVESDAQSVVNLVNNKQGGNSEIFWIISEIQNLMRTFDL 664

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BLAST of Spg029922 vs. NCBI nr
Match: XP_038722039.1 (uncharacterized protein LOC120014190 [Tripterygium wilfordii])

HSP 1 Score: 106.7 bits (265), Expect = 5.8e-19
Identity = 102/351 (29.06%), Postives = 155/351 (44.16%), Query Frame = 0


Query: 45  GDGRQVYIEEGPWMMDDGNWKPIR--VDENLKGKRVVELI-QEDGNWKKDLIRNSFIRSD 104
           GDG  V +    W+     +KPI    D+ +KG  V  LI Q   +W  D ++NSFI SD
Sbjct: 318 GDGSSVRVGLDTWLPRPVTFKPISWLPDDIIKGAPVASLINQATHSWDIDRVQNSFIPSD 377

Query: 105 AEIILNIPKRNISKEDEIIWGKDSKGLFSVKRTGQRMWNICFGIANGLG---NFGD--PL 164
            E+IL+IP       D I+W  DSKG FS+K T        + +A GL    + GD  PL
Sbjct: 378 VELILSIPISPFRAVDHILWHWDSKGRFSIKST--------YHVAQGLKAEISVGDLPPL 437

Query: 165 FLILKQFFLYAGAGGDLKIIGKLC---PGSWIF-----------RKRGQHITCAVQEDKK 224
                   +YA   G  +   K C     +W+            R R    T +      
Sbjct: 438 --------IYAPILGLHQPPSKACLFICSAWVIWNNQNNFLHNQRSRDAAETMSFVCSYV 497

Query: 225 YQLSSPETQLS----------HGVWKPPDGLLWKMNVDAAWFDASSSGGVGWLIRDSAGS 284
            +LS+  T+ S           G W+PP    +K+NVD A F A  S G+G ++RD  G 
Sbjct: 498 QELSALATRASLPTQARVPTQSGCWQPPSLNGFKLNVDGAVFAADQSIGIGGVLRDHKGE 557

Query: 285 LVGAGCKKISRKSEIKMLESLAILEGINQFTTNGLLTPDFLSHNLVIESDAATVVKLINR 344
           +  +  + I  K    + E+  +L G+        L+ +    + V+ESD++  +  I+ 
Sbjct: 558 VFMSFVEVIYGKFGPIIAEAFTVLRGMQ-------LSGEAGFRDFVVESDSSIFITAISS 617

Query: 345 EAEDLSEISLLIDEIQVQATRANVVEFVFSPRNTHFLAHSLARAAAHFSDF 364
           ++  LS    L+D ++        V F F+ R  + +AH+LAR A     F
Sbjct: 618 DSHQLSVYGHLVDAVRDVPRSMGCVYFQFANRLCNSVAHTLARNAQVLGPF 645

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BLAST of Spg029922 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 104.4 bits (259), Expect = 2.9e-18
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 0


Query: 182 GSW---------IFRKRGQHITCAVQEDKKYQLSS---PETQLS--HGV------WKPPD 241
           GSW         IFR      +  +Q+  K+   S    ET LS  H        W+PP 
Sbjct: 16  GSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSMLHKTLNNKLKWEPPP 75

Query: 242 GLLWKMNVDAAWFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAILEGINQ 301
             +W +N DA+W D++  GG+GW+IR   G +V AG + +   + +K+LE+ AILEG+  
Sbjct: 76  MHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLRN 135

Query: 302 FTTNGLLTPDFLSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANVVEFVF 359
            T  G+L P      L IE+D+A V  L+NR+ EDL++   +++EI        ++ F  
Sbjct: 136 LTNLGVLRP------LHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFAK 195

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BLAST of Spg029922 vs. NCBI nr
Match: EEC68887.1 (hypothetical protein OsI_37529 [Oryza sativa Indica Group])

HSP 1 Score: 101.7 bits (252), Expect = 1.9e-17
Identity = 93/365 (25.48%), Postives = 156/365 (42.74%), Query Frame = 0


Query: 45   GDGRQVYIEEGPWMMDDGNWKPIRVDENLKGKRVVELIQEDGNWKKDLIRNSFIRSDAEI 104
            G+G  + I    W+  D + +PI    N + K V +LI EDG+W    I   F   DAE+
Sbjct: 1384 GNGNSIRIWRDSWLPRDHSRRPITGKANCRLKWVSDLITEDGSWDVPKIHQYFHNLDAEV 1443

Query: 105  ILNIPKRNISKEDEIIWGKDSKGLFSVK---RTGQRMWNICFGIANGLGNFGDPLFLILK 164
            ILNI   + S+ED I W  D  G+FSV+   R   ++ NI    ++G  N      +I K
Sbjct: 1444 ILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEMIWK 1503

Query: 165  -------QFFLYAGAGGDLK-------------------IIGKLCPGSWIFRK------- 224
                   + F +  A   L                    I GK  P +   ++       
Sbjct: 1504 CKVPQKVKIFAWRVASNCLATMAMFLMTLWRNWYVRNELIHGKSAPPTETSQRFIQSYVD 1563

Query: 225  --------------RGQHI--TCAVQEDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAA 284
                          +G+H+  T  ++   KY++ +         W+ P     K+NVD +
Sbjct: 1564 LLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLNNH----QPCWERPKDGWMKLNVDGS 1623

Query: 285  WFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAILEGINQFTTNGLLTPDF 344
            +  +S  GG+G ++R+SAG ++   CK + R +     E  A +EG+ +   +  L P  
Sbjct: 1624 FDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACVEGL-KLAIHWTLLP-- 1683

Query: 345  LSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANVVEFVFSPRNTHFLAHS 358
                + +E+D A+VV+L+     D S ++ +I E +       V+      R+ + ++H 
Sbjct: 1684 ----IQVETDCASVVQLLQGIGRDFSVLANIIHEARHLLVGERVISIKKICRSQNCISHH 1737

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BLAST of Spg029922 vs. NCBI nr
Match: KAA3472112.1 (reverse transcriptase [Gossypium australe])

HSP 1 Score: 97.8 bits (242), Expect = 2.7e-16
Identity = 100/360 (27.78%), Postives = 156/360 (43.33%), Query Frame = 0


Query: 26   CRARALIILGKFAASRRCG--GDGRQVYIEEGPWMMDDGNWKPIRVDENLKGKRVVELIQ 85
            C AR LI  G       C   G+G+ + I   PW+   G       + N+  + V +LI 
Sbjct: 711  CGARELIAAG------LCWRIGNGKSINIWNDPWVPGTGQSCLSVQNMNIHWQTVNQLID 770

Query: 86   EDG-NWKKDLIRNSFIRSDAEIILNIPKRNISKEDEIIWGKDSKGLFSVKR------TGQ 145
            E    WKKD+I        A+ ILNIP     +ED ++W  D+ G++SVK       +  
Sbjct: 771  EQSFTWKKDIIHKLVDCDKAKRILNIPLARSDEEDLLVWRHDNTGVYSVKSGSAPEDSEH 830

Query: 146  RMW--NICFGIANGLGNF----GDPL--FLILKQFFLYAGAGGDLKIIGKLCPGSWIFRK 205
             +W   +   I N L  +    GDP     +++ F +       L  I       W  R 
Sbjct: 831  LLWYCEVLRTIWNLLDLYVDLDGDPSEDNKLVRMFIIVTDEKRKLLTISFW--AIWYMRN 890

Query: 206  RGQHITCAVQEDK----------KYQLSSPETQLS----HGVWKPPDGLLWKMNVDAAWF 265
            +  H  C    D+          +  LS     LS       WKPP   + K+N DA++ 
Sbjct: 891  KMVHEGCKFSLDEIVCFIRRYVYELNLSCTSNLLSISKNTAFWKPPLPGIIKLNFDASFV 950

Query: 266  DASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAILEGINQFTTNGLLTPDFLS 325
            +A++S  VG + R+  G ++GA   +I+  ++  + ES A    I       L   D   
Sbjct: 951  NATNSAIVGVVGRNDRGLIMGACTYQINDAADAFVAESRACERAI-------LFAIDMGF 1010

Query: 326  HNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANVVEFVFSPRNTHFLAHSLA 355
              +++E D+ TV+K I  E +D S I  +I  I++ A     + F F PR  + +AH+LA
Sbjct: 1011 RKIMVEGDSLTVIKKIRAELDDRSVIRPIIRNIRMLAKGFEQISFSFIPRKGNRVAHTLA 1055

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BLAST of Spg029922 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-18
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 0


Query: 182 GSW---------IFRKRGQHITCAVQEDKKYQLSS---PETQLS--HGV------WKPPD 241
           GSW         IFR      +  +Q+  K+   S    ET LS  H        W+PP 
Sbjct: 16  GSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSMLHKTLNNKLKWEPPP 75

Query: 242 GLLWKMNVDAAWFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAILEGINQ 301
             +W +N DA+W D++  GG+GW+IR   G +V AG + +   + +K+LE+ AILEG+  
Sbjct: 76  MHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLRN 135

Query: 302 FTTNGLLTPDFLSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANVVEFVF 359
            T  G+L P      L IE+D+A V  L+NR+ EDL++   +++EI        ++ F  
Sbjct: 136 LTNLGVLRP------LHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFAK 195

[Close]

BLAST of Spg029922 vs. ExPASy TrEMBL
Match: B8BN96 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37529 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.0e-18
Identity = 93/365 (25.48%), Postives = 156/365 (42.74%), Query Frame = 0


Query: 45   GDGRQVYIEEGPWMMDDGNWKPIRVDENLKGKRVVELIQEDGNWKKDLIRNSFIRSDAEI 104
            G+G  + I    W+  D + +PI    N + K V +LI EDG+W    I   F   DAE+
Sbjct: 1384 GNGNSIRIWRDSWLPRDHSRRPITGKANCRLKWVSDLITEDGSWDVPKIHQYFHNLDAEV 1443

Query: 105  ILNIPKRNISKEDEIIWGKDSKGLFSVK---RTGQRMWNICFGIANGLGNFGDPLFLILK 164
            ILNI   + S+ED I W  D  G+FSV+   R   ++ NI    ++G  N      +I K
Sbjct: 1444 ILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINKAWEMIWK 1503

Query: 165  -------QFFLYAGAGGDLK-------------------IIGKLCPGSWIFRK------- 224
                   + F +  A   L                    I GK  P +   ++       
Sbjct: 1504 CKVPQKVKIFAWRVASNCLATMAMFLMTLWRNWYVRNELIHGKSAPPTETSQRFIQSYVD 1563

Query: 225  --------------RGQHI--TCAVQEDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAA 284
                          +G+H+  T  ++   KY++ +         W+ P     K+NVD +
Sbjct: 1564 LLFQIRQAPQADLVKGKHVVRTVPLKGGPKYRVLNNH----QPCWERPKDGWMKLNVDGS 1623

Query: 285  WFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAILEGINQFTTNGLLTPDF 344
            +  +S  GG+G ++R+SAG ++   CK + R +     E  A +EG+ +   +  L P  
Sbjct: 1624 FDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACVEGL-KLAIHWTLLP-- 1683

Query: 345  LSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANVVEFVFSPRNTHFLAHS 358
                + +E+D A+VV+L+     D S ++ +I E +       V+      R+ + ++H 
Sbjct: 1684 ----IQVETDCASVVQLLQGIGRDFSVLANIIHEARHLLVGERVISIKKICRSQNCISHH 1737

[Close]

BLAST of Spg029922 vs. ExPASy TrEMBL
Match: A0A803NTU1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.6e-17
Identity = 85/346 (24.57%), Postives = 144/346 (41.62%), Query Frame = 0


Query: 45   GDGRQVYIEEGPWMMDDGNWKPIRVDENLKGKRVVELIQEDGNWKKDLIRNSFIRSDAEI 104
            G G  + + E PW+    N K I      +G +V++L   DG+W +  I+++F   D  +
Sbjct: 683  GSGNDIRVVEDPWIPRLVNLKLIEKPNIPEGMQVIDLKNWDGDWDEKFIQSNFHSDDVNL 742

Query: 105  ILNIPKRNISKEDEIIWGKDSKGLFSVKRTGQRMWNICFGIANGLGNFGDPLFLILKQFF 164
            IL++   N   +D+I+W     G +S+K +G ++ +     A      G          +
Sbjct: 743  ILSLATSNKEVDDKIMWHYSKNGEYSIK-SGYKLASNLILKAEASNMKGIESKTSSNPSY 802

Query: 165  LYAGAGGDLKIIGKL--CPGSWIFRKRGQH------------------------------ 224
               G   + +II  L  C   +   KR                                 
Sbjct: 803  NRCGDLHNERIIHALWRCEAVFPIWKRSDFWKIFKQVRTQDPWEFVESCFCMPACGVVDW 862

Query: 225  -ITCAVQEDKKYQLSSPETQLSHGVWKPPDGLLWKMNVDAAWFDASSSGGVGWLIRDSAG 284
             I  AV    +Y +     + S   W PP   +WK+NVDA  ++ + S   G +IRD +G
Sbjct: 863  CILVAVDLQDQYTIQGKTKEKSR--WSPPQVGVWKVNVDAGVYNMNGSCSSGVVIRDYSG 922

Query: 285  SLVGAGCKKISRKSEIKMLESLAILEGINQFTTNGLLTPDFLSHNLVIESDAATVVKLIN 344
             ++ +     SR       ES+AI+ G+      G+           + SD    + LIN
Sbjct: 923  QVLCSSSGFSSRPLSALPAESVAIISGLKLALAAGV-------KKNRVASDCLNAINLIN 982

Query: 345  REAEDLSEISLLIDEIQVQATRANVVEFVFSPRNTHFLAHSLARAA 358
              +  +S++  L++EI   +   ++VEF F  R+ + LAHSLA+ A
Sbjct: 983  NPSRSISDVDNLLEEITGLSCNFDLVEFCFELRDANLLAHSLAKLA 1018

[Close]

BLAST of Spg029922 vs. ExPASy TrEMBL
Match: A0A5B6VSY9 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_022621 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-16
Identity = 100/360 (27.78%), Postives = 156/360 (43.33%), Query Frame = 0


Query: 26   CRARALIILGKFAASRRCG--GDGRQVYIEEGPWMMDDGNWKPIRVDENLKGKRVVELIQ 85
            C AR LI  G       C   G+G+ + I   PW+   G       + N+  + V +LI 
Sbjct: 711  CGARELIAAG------LCWRIGNGKSINIWNDPWVPGTGQSCLSVQNMNIHWQTVNQLID 770

Query: 86   EDG-NWKKDLIRNSFIRSDAEIILNIPKRNISKEDEIIWGKDSKGLFSVKR------TGQ 145
            E    WKKD+I        A+ ILNIP     +ED ++W  D+ G++SVK       +  
Sbjct: 771  EQSFTWKKDIIHKLVDCDKAKRILNIPLARSDEEDLLVWRHDNTGVYSVKSGSAPEDSEH 830

Query: 146  RMW--NICFGIANGLGNF----GDPL--FLILKQFFLYAGAGGDLKIIGKLCPGSWIFRK 205
             +W   +   I N L  +    GDP     +++ F +       L  I       W  R 
Sbjct: 831  LLWYCEVLRTIWNLLDLYVDLDGDPSEDNKLVRMFIIVTDEKRKLLTISFW--AIWYMRN 890

Query: 206  RGQHITCAVQEDK----------KYQLSSPETQLS----HGVWKPPDGLLWKMNVDAAWF 265
            +  H  C    D+          +  LS     LS       WKPP   + K+N DA++ 
Sbjct: 891  KMVHEGCKFSLDEIVCFIRRYVYELNLSCTSNLLSISKNTAFWKPPLPGIIKLNFDASFV 950

Query: 266  DASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAILEGINQFTTNGLLTPDFLS 325
            +A++S  VG + R+  G ++GA   +I+  ++  + ES A    I       L   D   
Sbjct: 951  NATNSAIVGVVGRNDRGLIMGACTYQINDAADAFVAESRACERAI-------LFAIDMGF 1010

Query: 326  HNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANVVEFVFSPRNTHFLAHSLA 355
              +++E D+ TV+K I  E +D S I  +I  I++ A     + F F PR  + +AH+LA
Sbjct: 1011 RKIMVEGDSLTVIKKIRAELDDRSVIRPIIRNIRMLAKGFEQISFSFIPRKGNRVAHTLA 1055

[Close]

BLAST of Spg029922 vs. ExPASy TrEMBL
Match: A0A5B6WEY4 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_019877 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-16
Identity = 99/368 (26.90%), Postives = 147/368 (39.95%), Query Frame = 0


Query: 26   CRARALIILGKFAASRRCGGDGRQVYIEEGPWMMDDGNWKPIRVDENLKGKRVVELIQED 85
            C AR LI  G F       G+GR V I   PW+   G       + N     V +LI E 
Sbjct: 771  CVARELIADGLFWRI----GNGRSVNIWNDPWVPGPGRSCLSVQNINTHWSTVNQLIDEH 830

Query: 86   G-NWKKDLIRNSFIRSDAEIILNIPKRNISKEDEIIWGKDSKGLFSVKR------TGQRM 145
               WKKD+I        A+ ILNIP  +  +ED ++W  D+ G+++VK       +   +
Sbjct: 831  SFTWKKDIIYKLVDCDQAKRILNIPLAHSDEEDVLVWSHDNTGVYTVKSGSAPEDSEHLL 890

Query: 146  WNICFGIANGLGNFGDPLFLILKQFFLYAGAGGDLKIIGKLCP----------------- 205
            W+             D L  I     LY    GD     KL                   
Sbjct: 891  WSC------------DVLRSIWNLLDLYVDLNGDSSEDNKLVRMFLTVTDEKRKLLTISF 950

Query: 206  -GSWIFRKRGQHITCAVQEDK------------KYQLSSPETQLSHGV--WKPPDGLLWK 265
               W  R +  H  C    D+            K   +S  +  S     WKPP   + K
Sbjct: 951  WALWFMRNKMVHEGCKFSLDELLCFIRRYVYELKMSCTSDFSSFSKNTAFWKPPLPGIIK 1010

Query: 266  MNVDAAWFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAILEGINQFTTNG 325
            +N DA++  AS+S  VG +  +  G ++GA   +++  ++  + ES A    I       
Sbjct: 1011 LNFDASFVKASNSAIVGVVRHNDKGLVIGACTYQVNDAADAFVAESRACERAI------- 1070

Query: 326  LLTPDFLSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANVVEFVFSPRNT 355
            L   D     +++E D+ TV+K I   + D S I  +I  I + A     + F FSPR  
Sbjct: 1071 LFAIDMGFRKIMVEGDSLTVIKKIRSASNDRSVIRSIIRNICMLAKGFEEISFNFSPRRG 1115

[Close]

BLAST of Spg029922 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 7.8e-06
Identity = 34/141 (24.11%), Postives = 63/141 (44.68%), Query Frame = 0


Query: 217 WKPPDGLLWKMNVDAAWFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAIL 276
           W PP     K N DA+  + ++  G+GW++R+S G+++  G  K   +   +  E   ++
Sbjct: 105 WSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLI 164

Query: 277 EGINQFTTNGLLTPDFLSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANV 336
             I         +  F    ++ E D  T+ ++IN ++ +   +   +D IQ        
Sbjct: 165 WAIQ-------ASYGFGHKKVIFEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSFES 224

Query: 337 VEFVFSPRNTHFLAHSLARAA 358
           +EF F  R  +  A  LA+ A
Sbjct: 225 IEFSFKHREQNGCADFLAKQA 237

[Close]

BLAST of Spg029922 vs. TAIR 10
Match: AT3G23320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-05
Identity = 43/169 (25.44%), Postives = 67/169 (39.64%), Query Frame = 0


Query: 217 WKPPDGLLWKMNVDAAWFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAIL 276
           W+ P     K N D +        G+ W+IR+S G+ +  GC K   +  IK  E  A++
Sbjct: 30  WQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTIKEAECTALI 89

Query: 277 EGINQFTTNGLLTPDFLSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANV 336
             I      G    +F       E D  TV +LI R  E    +   ++ IQ  +     
Sbjct: 90  WAIQCAWDLGYRRVEF-------EGDNITVNRLI-RNKETNPRLRYYLEFIQQWSKAFTT 149

Query: 337 VEFVFSPRNTHFLAHSLA-RAAAHFSDFVFFPFDPSLCLRMDESISEGV 385
           V+F F  R  +     LA +A A+  +   + F P   +      +E V
Sbjct: 150 VKFTFRHREQNVCVDVLAKKAVANHINHTLYHFCPRFLMSFVNKDAEHV 190

[Close]

BLAST of Spg029922 vs. TAIR 10
Match: AT1G52990.1 (thioredoxin family protein )

HSP 1 Score: 44.7 bits (104), Expect = 2.5e-04
Identity = 35/132 (26.52%), Postives = 60/132 (45.45%), Query Frame = 0


Query: 226 KMNVDAAWFDASSSGGVGWLIRDSAGSLVGAGCKKISRKSEIKMLESLAILEGINQFTTN 285
           K N DA+  +     G+GWLIR+S G+++  G  K   +   +  E  A++  I      
Sbjct: 49  KCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQ----- 108

Query: 286 GLLTPDFLSHNLVIESDAATVVKLINREAEDLSEISLLIDEIQVQATRANVVEFVFSPRN 345
              T  F    ++ E D + V +LIN ++ D   +   +D I+         EF+F+ R 
Sbjct: 109 --ATSAFGYTKVIFEGDNSNVNRLINTKS-DNPRLKHYLDTIKSWIPSFTSTEFIFTHRE 168

Query: 346 THFLAHSLARAA 358
            +  A +L + A
Sbjct: 169 QNQCADTLVKKA 172

The following BLAST results are available for this feature:

BLAST of Spg029922 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024033483.1	3.1e-20	25.72	uncharacterized protein LOC112095606 [Citrus clementina]	[more]
XP_038722039.1	5.8e-19	29.06	uncharacterized protein LOC120014190 [Tripterygium wilfordii]	[more]
XP_022155262.1	2.9e-18	34.52	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
EEC68887.1	1.9e-17	25.48	hypothetical protein OsI_37529 [Oryza sativa Indica Group]	[more]
KAA3472112.1	2.7e-16	27.78	reverse transcriptase [Gossypium australe]	[more]

BLAST of Spg029922 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg029922 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNV9	1.4e-18	34.52	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
B8BN96	9.0e-18	25.48	Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX...	[more]
A0A803NTU1	2.6e-17	24.57	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A5B6VSY9	1.3e-16	27.78	Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_022621 PE=4 SV=1	[more]
A0A5B6WEY4	1.7e-16	26.90	Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_019877 PE=4 SV=1	[more]

BLAST of Spg029922 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65005.1	7.8e-06	24.11	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G23320.1	3.0e-05	25.44	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G52990.1	2.5e-04	26.52	thioredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 224..359 e-value: 1.4E-9 score: 40.1
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 228..357 e-value: 1.1E-18 score: 67.2
None	No IPR available	PANTHER	PTHR33033	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 214..359
None	No IPR available	PANTHER	PTHR33033:SF67	SUBFAMILY NOT NAMED	coord: 214..359
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 228..355 e-value: 4.99047E-18 score: 78.1248
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 225..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg029922.1	Spg029922.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity