Spg029865 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg029865
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold6: 12908542 .. 12915683 (+)
RNA-Seq Expression	Spg029865
Synteny	Spg029865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCCCGCGCCCACCTGCGAACCTATAGAGCCCACGCTTACATGCGAGCCTATAGAGCCCATGCTTCCATGCGAGCCTATAGAGCCCACGCTTACATGCGAGCCTATAGAGCCCACGCCTACATGCGAGCCTAAGCCTTTCAGCTTAGTGCACACGCCTCCATGCGAGCCTATAGAGCCCACGTTTATATGTGAGTCTATAGAGCCCACGCCTTCATGCGAGTCCAAGCTTTTCAGCTTAGTGCCCACGCTTCACATGCGAGCCTATAGAGCCCACGCTTACATACGAGCCTATAGTGCCCACGCCTACATGCGAGCCTAGGCTTCTCAGCTTAGAGTCCACGCTTCTCATGCGAGCCTAAGCTTATTGCTTAGTGCCTACGCCTACATGCGAGCCTAGGCTTCCACGCTTAGAGCCCACGCTAATGCACGCGAGCCTGGACTACCAAGTCTACCTCACCTCAGAGCTCAAACACTTGATATAAGTCAAGCTCACCTTGTGGAGGCTGAGACCGAGCACCTCTTGTCGAGGCCGAGCACAAACTTTAAAGGTATTCTCCTATTTACTCAACTGAACTTTGTGTTTTTAAATGAAGTTTTACTTGAGATTGTGGGCTACAAAGGGGATATGCACTCCCTATTAAACAAAAAGCAAGTAGCAGGGGATATGCACTCCCTATTAAACAAAAGGCACACTAGCTTAGCATGTCTAGCCAATGACTACATGTTCTAGCCTATTATTTTATTATTCTCCTACAAAGACTAATATATGGATACAGGGAGCTAAGTTTCAGGCTAACAGAGGCATGAGGCCGAGACCGACCTTAGCCTCTTCCCTCATTTTTCTTTTGCAGAAATTAACTTTTTGATGCAGGATCGTGAGATTTTCCATTTTTCCTACATTTTACCTGTGGAATGGTCATGTATCTAGAATGAAGCACTCCGAATGACCAAGAACGGGGGTCCAGGGGCGAAGCGCCCAGTGGGGGTTCGGAGGCAACGCCCCCTAAGCAAAATTAGGAAGCTGTTGTGCTCGGCCTCTTCCCGATGCCGAGGCCGACCATCACCAATTTTTTAATCCCTCACCTTTCTCATTTACCATTTCACCTAACCCCTATTCAGGGAATGTCTACTTTGTCCATTTCTATCCTATTTTTCAGGATGACAATAAAGCTGCACATAGGTCAGCACAAGGCAAAAATCATTACTCTTAAATCGGGCTTGAGGAGCTCAACCTATAGCAATAAGTCACCCTGAATCCCAATTCAAGAGTGGGGGCTTAATGTTATAGGTAATTTTGGACCATCCCAATGCACAAGGAGCTGACGAGGACATCCGGGCAGAAATAGGACTGAGAGATGGACCCCAGAGGTGAGACCGACAAGTAGGACGGGCCAAGACCGAAGGGGTCGGGCCCTGCTCAGCCTCGGCCTGAGGCCATGGCCGAGGCCGACCAAGCGGGCCGAGTTCTTTCAGCTCCGTTCAGTCCCTACCGCCTCTAGCCACCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATCCCTAAAAACCCTAGGAGTATGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCTCGACTCTCTCCTCTTACTCTCTTGCTCTCCTCTTTCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACACACTGGTGTGCAGGTTTACTCTTTTGCAGGTCATGTCTTCACCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTTCCTCTGACCAAATTTGACCATCAACATCTACAATTGAATTTAAAAAAAAGAAGTTTCATACAAATTTGCAATTTTGTATTAAACAATAAATCTTGGTTGCAACTTGCAAGTTGATTTGGCCACTCACAAACAAGGATGAAAAAATCGAAGATATCCGTCGATATATCGGATTTTTAGAGAGACCGACATAGATATGAGGGGGTAAAGTCTTTTTTACCCCATTATCGCCGAAATATCGGAAATATGGCAAAATATTTTGGTGTCGGTATCTCCAAAAAGTTAATCCAAAAGTTATTGGGTGTCGGCGTCAACATAGTCAACATCGAAGAAAAGTCCTTTTTTTATTCGTAGGTTCATTTTCTACAATTTACATAATTTTCTTAATATTCGATTTCTTTTTTTTTTATTTGACTTTCCAATCAAAAAGCTTACGTGTAACGATAATGATGTAAGGAAGATTTTCGCCATAACTAGACCACGACCACATGTGCAAAATATGCACTCTTCACAATTTCTCTTTAGGAATAAAATAATATTTATTTACTAATTTAATTCTATTTCTTTTTCAGAATTAAAGTTTAGTATGTGTATTTAATTAATAAACCTTGGACCACATGTGTAATTATTCTTAGGAATTGTGAGTATGATGTTTTCGTTTAAAAATATTAGATGGGCAAGTAGTGGTTTCTAGCCTATAATAATTTGGGTGGAAAATTGAAAAACTAATTTGATTAATTAGGTCCCGTTTGATAACTATTCGATTTTTAAAAATTAAGCTTATTTTCCTTCAATTTCTTTACCATGATTTTTCATCTTTGTTAAGGGCACATTTGAATTCCTAGCCAGATTCCAAAAACAAAAACAAGATTTTGAAAACTACTTTTTATAGTTTTCAAAACTTGATTTGGTTTTTAAAAACATGGGAGGAAGGTATATGACAATACCAAGAAACTTTTAATGGTTGAAGTAGTTTTTTAAACTTAATTTTCAAAAACCAAATAGTTATCAAACGAGACCTTATTAATAAAATTGTTGCAACTAAATCTTTAAAAACTTCATTTAAATCCTCAAATTATAAGATTGTTATAATTAAAACTAGATTCCTTATATCAAAATTTTTCTTTTCTAAAATCAAGATGAGAGCTAAATGTCAATTTTTTAATGGTTAAAATTGTACCTTTAAATTTTTAAAGAGTAAAAAAGAAAATAGATCCAATTGCAAAAATTCGATAATTTGAAAGTTATCCTTCGAAGTGACCCATGCTTTTTGTAATATTGTAAGGGATTAATTGCAAATTTTTGTAACTTAGGAGATGATTGACCAATTAGTGAATATTTGAGGACATGATTGTAATGACTTTATAGGGGTGGTTTTTGCAATTTTTTATAATATAAGAGCTTGTTTGGAGGACCACTTTGAAAACAATTTCATATATATATAATTTTTGTACAACTTACAAGGTTATAACCCCTTTATTTTTCGCCAACCAGAGAATAACTCAATTGACATAAATCTTGTACTAATGACCTCTCGTCCCCACACCCCACATGTCGTAAAAAAAATCTTTCTTTTTTTTTTTTTTGTAAAAATATGATTTTGGTCTCTAGACTTTGGAATTCATTATATATATATATATATATATATATATATATATATTAGTTCTTATATTTTCAAATGTCCAAATTTAGTCCCTATACTTTCTATAAATTTTAAAATTAATCCCCATTGTTAGTTTAAAGTAATTTTTATTGAACTTAGTATAATAATGATGATGATGATGACAACAACAACAACAATAATAATAATAATAGTTTCTATTCAAGAAAAGGCACCGTGCGAGAATATGTTTTCATAATTCATAAACGGAAGGTTAACAGTGACTAATTTGTTTTTGGAAAAGTTAATCATAAACTAGCCGAAGGGACTAAATTTAAGAATTATTGAAAATACGATGGCAACATTTGGACATTTAAAGCACAAAAACTAAAATAAACCTGATAGCGCAATTTATTGAGCTATATTTTATGTTATTTTAATGTTAGTCTCGAGTATTATTTGGCCACTTTTATGTCTATTTGGTTTAATTTTGTAGGAATCAGATATTTCGATGGAGATTGAAGTTTCGGTGAATTAGTAGCAAAAGAATGAATTTTATTGAAGAAATTTACAAAAGAGCATAAGGTTCAAGGCATCTATATAATAGGGCAGCGTTGAGATGCTACCATTGGAGAGTCTCAACGTTGGCCGCAGCAATCAGGAGGTGCGCAAACGAGGCAGCGTCAAGACGCTAGACGCTGTGAGTATTCTGGAAATAAATTAGGGCATATCGACACAGCGTCACGACGCTGTCGCGCAGAAAGTTCAGTATTTATACTTTGCGATGCCATCTGATTTTGGGAGCCCATTTGGAGAGAAAAAGACGACTTTTGAGAGCACAATCTGGACAGAACGCTGAGGAGACCAAGAGGAGCTTAATTTTGGAGATTAGATCGTGAGGATCGTGACGGGAACGCGCGGGGATCACAGCTAGCGATTTTAATCTTTCTCCCTTGTTTCTTGTACTGATTTTTATCATGTTTGGGACTGATTTGACTTGAATTTTAGAGACCATGAGTTGCTAAATTTCGTTTCTTAGGGGCTTGATGTAGCCATTAGATTGTATGGATTAATTTACGGATTTTTTAGGACGTTTCGTAACGCGTTTCATTTATGCAATTGTATGCTTAATGCTTATAATTCTTGATTACGGATTGTATGATTCTTGTTTCTGAACTAATTGCTCGGGGGAGGGTAGTTTAGATTAGACCATCAATTGCATGACTTAGTTGATTCTACAATCGGGAGATTTGAGATTGCTAGAGAAACCGTTTTAAGGATTGATCATTAATGCTTATGCTTGTTGTAGAAATTAGATAGGGATATCAATTTCTTAATTTGCATAAAGAATTAATTGTACTCAGGAGAGGCTTTTAATAATCCATAATCCTTGGTTTATGAAATTGTTACGTGTTCGTTCCTAATTATTCTTTGTATTAATTCATGCATTTAATCGGTGAAATCAATTCCCTAAGGCTTTTCTCTATTGAGTTTCCACACTTTTTATTGCTTTGAGAAGTTTTCCATTGATTTGCATATTTCTCGATTATTTTCTCTAAATAAAATTTGGCAAATATACCTTTAGTAATTAGGGGAACTAGAAAACCAATCCAGAGGACGACATTCGATTTTTAATCACTATATTATAACTTAGGCCCGTACATTTGCGGTTAGCAATTTGCGTATCAAAACCCCATGCTAAAGTTTAGGACTAAAATGATATTTTAACTATTTTTTAATTATTCAAAATTGTTCTTTTGAAACAATCAAAGTATTTTAGATATTATGTGCAATTGCAAGAATTCCATTTAAAAAAAAAAAAGAATGCATGTGTTTTTTTTATTAATTAAAAATAGTTATCAATACAAATCATGTAAATATAAAACCATGATAAATCTTAATTATGATAATGTTAATTACGCGCTGTTTGTTTTTTGTTTTTTTAATTATGAAAAGTATATTTAAACTTTGCACTTTGATTAAAAAATACACACATTCTTTCAAAAGTTGCAATATTACCATTGACTTTTCATAAACGTTTCAAAACTACCCTTAGAGTAGAAAAACCATTAAAATGTTGGACGAAAAGTCAACGTGTCTGAATATCATTCTTTCATACTTAATTCAAGCAAACATCCTAATCACTACCACACAACGTTCCAACTTTCAAGTCACCGCCTTGTCAATTTTTTGTCCAACATTCTAATGGATCTCTACTCTAAAGTCGAAGTTCTTTTACAACAACTTTTGAAAGAATAAGAATTTTTTTAAAAAAAAATAAAAGGCAAAGTTCATGAAAATTTCTTTTATGATTTAGCCTTCTTTTTTTTTTCTTACAAGAAATATTTTTTTCTAAAGAAAAATAACTATGTTGTTCAATGCCCGTATATATTAGTAATGTTAAAAATATGAAAAAGAAACATATATTACTTTTTTTAAAAAAATAAAACTATTTTACTTATTTTATGCCGAGCATTTATTCCATAAAAAAGAATGCATGTGTCTTTTTTTTCATTAATTTAAAATCATTATGGACCCAAATCATGTAAATAAAACCATAATTGGCTTAATCATGATAATGTTAATTATACTTTTTTGTACAAGTAATTACTTTGTTCAATGCATAAAAGTTGTTATGAATTAGTAAAAAGATTTTAAACACTGGAAACAAAGTAAGTATATTACTAAATATAATTTTTTTTTTCTTTTTGACAATACTACTAAATATAATTAAAAAAAAATACGAATGAACTTTTTTTTTTTTAATACATCAGCATTTGGGGTGGAGGGATTCAAACCTCTAACCTCATGGTCGAGGGAACATACCAATTACCGTTGAGCTAAGCTCGCTTTGGCAAATACGAATGAACCTTAAAAAAAAAAATCTAAAGAAGTTCATAAATAAGAATTAAGAACACTTGTTTTTCTCCTCTATACATCTAAAGCTTTAACCTTTTGTTTGGATGTATTAATTAATTGAGTTATGTCAAGGTTGAATTTATAAATTAGTTTGTTTCATTTCAATCTATTTTAGTTATTGACATTAATAATCAAATTAAATTTCCATTAAAAATTAATGTGCCATCCTGCCTATAATTCGTATCTCCCTAACAAGTCTGACATGTCACATGCTTGACTTAGAAGCAATATATTTATTTATTTATTTATTTATTTATTTGTTTATTTATTTATTTCATACACAAAAAAACAACATTATTTTATTTATTCTTCTAAAAAAATATTATTATTTTTGTTATGGGTAATTTTGGTATAGCGGAAATTCTGGAGAAAGAGACCTTGGGCCCAAGGTAAACCGGTCCACGAGGAGAAGCCCGTCCGGGAAGCAAAACCATCTCCAATGCCTGGGCCGAGGCCGAGGAACTGGTTAGCCTCGGCCCAATGCCGAGGCCGACCAGCCAGTTGGGCCCAATGGCCACCTGGGTCGTGTGGGGAAGTCTTCTAGGGCCCAAGGGAGGCAGGGTTCGTGGACCAGGAGGCAACCAACGAAGAGAAGAGAAAGAAAACCCTAATGGGGGAGGAAGTATAAAAGGTCCTTTGGGCATCGAAATCTGAACTCCTAACTCGATACTTTGAGATAATTATTGTGATCTGGTTGTCGATAACTGACTTAGGCATCGGAGCGTGTGTGGTGAGCACCACACCGGTGTGCAGTGTTTACTTCCTTTGTTGCAGGTCACGTCTTCCCCGGATTCAAACAAATTCACTGTTGAAGCCACGTGAAGGTCAGGTGAGCGCTTGA

mRNA sequence

ATGGTGCCCGCGCCCACCTGCGAACCTATAGAGCCCACGCTTACATGCGAGCCTATAGAGCCCATGCTTCCATGCGAGCCTATAGAGCCCACGCTTACATGCGAGCCTATAGAGCCCACGCCTACATGCGAGCCTAAGCCTTTCAGCTTAGCTTCCACGCTTAGAGCCCACGCTAATGCACGCGAGCCTGGACTACCAAGTCTACCTCACCTCAGAGCTCAAACACTTGATATAAGTCAAGCTCACCTTGTGGAGGCTGAGACCGAGCACCTCTTGTCGAGGCCGAGCACAAACTTTAAAGGGAATGTCTACTTTGTCCATTTCTATCCTATTTTTCAGGATGACAATAAAGCTGCACATAGAAATAGGACTGAGAGATGGACCCCAGAGGTGAGACCGACAAGTAGGACGGGCCAAGACCGAAGGGGTCGGGCCCTGCTCAGCCTCGGCCTGAGGCCATGGCCGAGGCCGACCAAGCGGGCCGAGTTCTTTCAGCTCCGTTCAGTCCCTACCGCCTCTAGCCACCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATCCCTAAAAACCCTAGGAGTATGAGCAGGTTTACTCTTTTGCAGGTCATGTCTTCACCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGGCAGCGTTGAGATGCTACCATTGGAGAGTCTCAACGTTGGCCGCAGCAATCAGGAGGTGCGCAAACGAGGCAGCGTCAAGACGCTAGACGCTCGGAAATTCTGGAGAAAGAGACCTTGGGCCCAAGGTAAACCGGTCCACGAGGAGAAGCCCGTCCGGGAAGCAAAACCATCTCCAATGCCTGGGCCGAGGCCGAGGAACTGGTCACGTCTTCCCCGGATTCAAACAAATTCACTGTTGAAGCCACGTGAAGGTCAGGTGAGCGCTTGA

Coding sequence (CDS)

ATGGTGCCCGCGCCCACCTGCGAACCTATAGAGCCCACGCTTACATGCGAGCCTATAGAGCCCATGCTTCCATGCGAGCCTATAGAGCCCACGCTTACATGCGAGCCTATAGAGCCCACGCCTACATGCGAGCCTAAGCCTTTCAGCTTAGCTTCCACGCTTAGAGCCCACGCTAATGCACGCGAGCCTGGACTACCAAGTCTACCTCACCTCAGAGCTCAAACACTTGATATAAGTCAAGCTCACCTTGTGGAGGCTGAGACCGAGCACCTCTTGTCGAGGCCGAGCACAAACTTTAAAGGGAATGTCTACTTTGTCCATTTCTATCCTATTTTTCAGGATGACAATAAAGCTGCACATAGAAATAGGACTGAGAGATGGACCCCAGAGGTGAGACCGACAAGTAGGACGGGCCAAGACCGAAGGGGTCGGGCCCTGCTCAGCCTCGGCCTGAGGCCATGGCCGAGGCCGACCAAGCGGGCCGAGTTCTTTCAGCTCCGTTCAGTCCCTACCGCCTCTAGCCACCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATCCCTAAAAACCCTAGGAGTATGAGCAGGTTTACTCTTTTGCAGGTCATGTCTTCACCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGGCAGCGTTGAGATGCTACCATTGGAGAGTCTCAACGTTGGCCGCAGCAATCAGGAGGTGCGCAAACGAGGCAGCGTCAAGACGCTAGACGCTCGGAAATTCTGGAGAAAGAGACCTTGGGCCCAAGGTAAACCGGTCCACGAGGAGAAGCCCGTCCGGGAAGCAAAACCATCTCCAATGCCTGGGCCGAGGCCGAGGAACTGGTCACGTCTTCCCCGGATTCAAACAAATTCACTGTTGAAGCCACGTGAAGGTCAGGTGAGCGCTTGA

Protein sequence

MVPAPTCEPIEPTLTCEPIEPMLPCEPIEPTLTCEPIEPTPTCEPKPFSLASTLRAHANAREPGLPSLPHLRAQTLDISQAHLVEAETEHLLSRPSTNFKGNVYFVHFYPIFQDDNKAAHRNRTERWTPEVRPTSRTGQDRRGRALLSLGLRPWPRPTKRAEFFQLRSVPTASSHPGFAWFVPKRLRIPKNPRSMSRFTLLQVMSSPSSTNLPLVAREGQGSVEMLPLESLNVGRSNQEVRKRGSVKTLDARKFWRKRPWAQGKPVHEEKPVREAKPSPMPGPRPRNWSRLPRIQTNSLLKPREGQVSA

Homology

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BLAST of Spg029865 vs. ExPASy TrEMBL
Match: S7PMB1 (Uncharacterized protein (Fragment) OS=Myotis brandtii OX=109478 GN=D623_10006814 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.2e-04
Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 3  PAPTCEPIEPTLTCEPIEPMLPCEPIEPTLTCEPIEPTPTCEP 46
          P   CEP EP + CEP EP +PCEP EP + CEP EP   CEP
Sbjct: 48 PCVPCEPCEPCVPCEPCEPCVPCEPCEPCVPCEPCEPCVPCEP 90

The following BLAST results are available for this feature:

BLAST of Spg029865 vs.


Match Name	E-value	Identity	Description

BLAST of Spg029865 vs.


Match Name	E-value	Identity	Description

BLAST of Spg029865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
S7PMB1	6.2e-04	58.14	Uncharacterized protein (Fragment) OS=Myotis brandtii OX=109478 GN=D623_10006814...	[more]

BLAST of Spg029865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg029865.1	Spg029865.1	mRNA