Spg029810 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg029810
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	amino acid transporter AVT6A-like
Location	scaffold6: 10024901 .. 10025753 (+)
RNA-Seq Expression	Spg029810
Synteny	Spg029810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCATTGACAATCTTGCACCAAGGGAGGAGAAGAAGTCAAGCAGGAAGAAAGTTGCGGTTGATGAGAAATCTCCTTTGTTACCAAGTAGACAAGATGAAGCTTCTGGGTATAATGAATTCAATGGAGCTTCCTTCAGTGGGGCAGTGTTCAATTTATCGACCACAATTATTGGTGCTGGGATCATGGCTTTGCCTGCAATGGTGAAAGAGTTAGGCCTATGTTTAGGGGTTGCTATGATCATCTTCATGGCATTCCTTACAGAGGCTTCAATAGAGCTCTTGCTCAGGTTTAGTCGGCCGCGGAAATCGGCTTCTTATGGAGGTTTAATGGGAGATGCTTTTGGGAGATATGGTAAAATGGGGTTGCAGATATGTGTTCTTATCAACAACATTGGTGTCCTTACTGTGTACATGATTATTATAGGTGGGTTTCAATCAATTCATAAACTTGTCATTAAATCTATCTCTATGATTTTGTTTCAGGTAGTATTTTCTAAAGACTGTGAAGCATCCTAGCCCTGAATGCATAGCTGTAAATAATTTTAATACATGTGAAAAGAATAGTAGTGAAAACTTTGAAATATTAGAACTTTTGTAAGAGATTGTTTGAGGACTTGGGGAAGATATTTCTTAATTGCATGTGCTCTCCAAAGCGTTAGTTTCAGGCTACTCATGGTCAGTCTGTTATCTTGGCAATTAGTAGCTTTCTTGGCTAGAAATTCTTACATATGCAGTTGGATGAGATGAACAATCTTGGTATGATTTTCTCTTAGGTGATGTGCTCTCTGGAACCACTGATGGCGGTGTTCACCATGCTGGTGTTCTAGAAGGATGGTTTGGACAACATTGA

mRNA sequence

ATGACCATTGACAATCTTGCACCAAGGGAGGAGAAGAAGTCAAGCAGGAAGAAAGTTGCGGTTGATGAGAAATCTCCTTTGTTACCAAGTAGACAAGATGAAGCTTCTGGGTATAATGAATTCAATGGAGCTTCCTTCAGTGGGGCAGTGTTCAATTTATCGACCACAATTATTGGTGCTGGGATCATGGCTTTGCCTGCAATGGTGAAAGAGTTAGGCCTATGTTTAGGGGTTGCTATGATCATCTTCATGGCATTCCTTACAGAGGCTTCAATAGAGCTCTTGCTCAGGTTTAGTCGGCCGCGGAAATCGGCTTCTTATGGAGGTTTAATGGGAGATGCTTTTGGGAGATATGGTAAAATGGGGTTGCAGATATGTGTTCTTATCAACAACATTGGTGATGTGCTCTCTGGAACCACTGATGGCGGTGTTCACCATGCTGGTGTTCTAGAAGGATGGTTTGGACAACATTGA

Coding sequence (CDS)

ATGACCATTGACAATCTTGCACCAAGGGAGGAGAAGAAGTCAAGCAGGAAGAAAGTTGCGGTTGATGAGAAATCTCCTTTGTTACCAAGTAGACAAGATGAAGCTTCTGGGTATAATGAATTCAATGGAGCTTCCTTCAGTGGGGCAGTGTTCAATTTATCGACCACAATTATTGGTGCTGGGATCATGGCTTTGCCTGCAATGGTGAAAGAGTTAGGCCTATGTTTAGGGGTTGCTATGATCATCTTCATGGCATTCCTTACAGAGGCTTCAATAGAGCTCTTGCTCAGGTTTAGTCGGCCGCGGAAATCGGCTTCTTATGGAGGTTTAATGGGAGATGCTTTTGGGAGATATGGTAAAATGGGGTTGCAGATATGTGTTCTTATCAACAACATTGGTGATGTGCTCTCTGGAACCACTGATGGCGGTGTTCACCATGCTGGTGTTCTAGAAGGATGGTTTGGACAACATTGA

Protein sequence

MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGAGIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGKMGLQICVLINNIGDVLSGTTDGGVHHAGVLEGWFGQH

Homology

[Close]

BLAST of Spg029810 vs. NCBI nr
Match: XP_038893937.1 (amino acid transporter AVT6A-like [Benincasa hispida])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 146/167 (87.43%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTIDNLAPREEK+S RKK AVDEKSPLLPSRQDE SG+NEFNGASFSGAVFNLSTTIIGA
Sbjct: 1   MTIDNLAPREEKRSGRKKSAVDEKSPLLPSRQDEVSGFNEFNGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGL LGVAMII MAFLTEASIELLLRFSRPRKS SYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLILGVAMIIIMAFLTEASIELLLRFSRPRKSTSYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           +GLQICVL+NN          IGDVLSGTT GGVHHAGVLEGWFGQH
Sbjct: 121 IGLQICVLVNNIGVLTVYMIIIGDVLSGTTVGGVHHAGVLEGWFGQH 167

[Close]

BLAST of Spg029810 vs. NCBI nr
Match: XP_022155039.1 (amino acid transporter AVT6A-like [Momordica charantia] >XP_022155040.1 amino acid transporter AVT6A-like [Momordica charantia])

HSP 1 Score: 269.2 bits (687), Expect = 2.2e-68
Identity = 139/167 (83.23%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTID LAPREE++S RKK AVDEKSPLLP+RQDE SG++EFNGASFSGAVFNLSTTIIGA
Sbjct: 1   MTIDTLAPREERRSIRKKAAVDEKSPLLPNRQDEGSGFHEFNGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGLCLGVAMIIFMAFLT+ASIELLLRFSRPRKS SYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTDASIELLLRFSRPRKSTSYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           M LQICVL+NN          IGDVLSGT+ GG HHAG+LEGWFGQ+
Sbjct: 121 MALQICVLVNNIGVLTVYMIIIGDVLSGTSTGGAHHAGILEGWFGQY 167

[Close]

BLAST of Spg029810 vs. NCBI nr
Match: XP_011649003.1 (amino acid transporter AVT6A [Cucumis sativus] >XP_031736897.1 amino acid transporter AVT6A [Cucumis sativus] >XP_031736898.1 amino acid transporter AVT6A [Cucumis sativus] >XP_031736899.1 amino acid transporter AVT6A [Cucumis sativus] >XP_031736900.1 amino acid transporter AVT6A [Cucumis sativus] >KGN61271.1 hypothetical protein Csa_006359 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 141/167 (84.43%), Postives = 147/167 (88.02%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTI++LAPREEK+S RKK AVDEKSPLLPSRQDE SG NEF+GASFSGAVFNLSTTIIGA
Sbjct: 1   MTIEDLAPREEKRSDRKKSAVDEKSPLLPSRQDEGSGVNEFSGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGL LGVAMII MAFLTEASIELLLRFSRPRKS SYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLLLGVAMIIIMAFLTEASIELLLRFSRPRKSTSYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           + LQI VL+NN          IGDVLSGTT GGVHHAGVLEGWFGQH
Sbjct: 121 IMLQISVLVNNIGVLTVYMIIIGDVLSGTTSGGVHHAGVLEGWFGQH 167

[Close]

BLAST of Spg029810 vs. NCBI nr
Match: XP_008441834.1 (PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Cucumis melo] >XP_008441835.1 PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Cucumis melo] >XP_008441836.1 PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Cucumis melo] >KAA0049933.1 putative sodium-coupled neutral amino acid transporter 6 [Cucumis melo var. makuwa] >TYK07665.1 putative sodium-coupled neutral amino acid transporter 6 [Cucumis melo var. makuwa])

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65
Identity = 138/166 (83.13%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTI+N  PREEK+S RKK AVDEKSPLLPSRQD+ SG NEF+GASFSGAVFNLSTTIIGA
Sbjct: 1   MTIENFTPREEKRSDRKKSAVDEKSPLLPSRQDDGSGVNEFSGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGL LGVAMII MAFLTEASIELLLRFSRPRKS SYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLLLGVAMIIIMAFLTEASIELLLRFSRPRKSTSYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQ 157
           + LQICVL+NN          IGDVLSGTT  GVHHAGVLEGWFGQ
Sbjct: 121 IMLQICVLVNNIGVLTVYMIIIGDVLSGTTASGVHHAGVLEGWFGQ 166

[Close]

BLAST of Spg029810 vs. NCBI nr
Match: KAG6581709.1 (Amino acid transporter AVT6A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018188.1 Amino acid transporter AVT6A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.7 bits (657), Expect = 6.6e-65
Identity = 136/167 (81.44%), Postives = 145/167 (86.83%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTIDNLAPREEK+S RKK  VDEKSPLLP RQDE +G NEF+GASFSGAVFNLSTTIIGA
Sbjct: 1   MTIDNLAPREEKRSGRKKSVVDEKSPLLPCRQDEGAGINEFSGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGL +G+ MIIFMAFLTE SIELLLRFSRPRKSASYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLFVGITMIIFMAFLTETSIELLLRFSRPRKSASYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           + LQICVL+NN          IGDVLSGTT  GVHHAGVLEGW+G+H
Sbjct: 121 IILQICVLVNNIGVLTVYMIIIGDVLSGTTADGVHHAGVLEGWWGRH 167

[Close]

BLAST of Spg029810 vs. ExPASy Swiss-Prot
Match: Q9LI61 (Amino acid transporter AVT6A OS=Arabidopsis thaliana OX=3702 GN=AVT6A PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-41
Identity = 94/165 (56.97%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 3   IDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGAGI 62
           + ++AP   + SS    + D  +PLLP    +   ++EFNGASFSGAVFNL+TTIIGAGI
Sbjct: 4   VGDVAPIPRRNSS--TCSNDIAAPLLPECHGDEVAHDEFNGASFSGAVFNLATTIIGAGI 63

Query: 63  MALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGKMG 122
           MALPA +K LGL LG+ MI+ MAFLT+ASIE LLRFS+  K+ SYGGLMG +FG  G++ 
Sbjct: 64  MALPATMKILGLGLGITMIVVMAFLTDASIEFLLRFSKAGKNRSYGGLMGGSFGNPGRIL 123

Query: 123 LQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           LQ+ VL+NN          IGDVL+G T+ G+HH GVLEGWFG H
Sbjct: 124 LQVAVLVNNIGVLIVYMIIIGDVLAGKTEDGIHHFGVLEGWFGHH 166

[Close]

BLAST of Spg029810 vs. ExPASy Swiss-Prot
Match: F4KBM7 (Amino acid transporter AVT6B OS=Arabidopsis thaliana OX=3702 GN=AVT6B PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.4e-38
Identity = 83/145 (57.24%), Postives = 106/145 (73.10%), Query Frame = 0


Query: 21  VDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGAGIMALPAMVKELGLCLGVAM 80
           V+  +PLL     E++G  EFNGASFSGAVFNL+TTIIGAGIMALPA +K LGL  G+ +
Sbjct: 12  VESTAPLLQESSSESNGGGEFNGASFSGAVFNLATTIIGAGIMALPATMKILGLIPGITI 71

Query: 81  IIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGKMGLQICVLINN--------- 140
           I+ MAFLT+ASIE LLRFS      SYGG+M D+FG+ G++ LQ+ +L++N         
Sbjct: 72  IVLMAFLTDASIEFLLRFSNIGNQRSYGGVMDDSFGKCGRIMLQVSILVSNIGVLIVYMI 131

Query: 141 -IGDVLSGTTDGGVHHAGVLEGWFG 156
            IGDVL+G  + G+HHAG+LEGWFG
Sbjct: 132 IIGDVLAGKNEYGIHHAGMLEGWFG 156

[Close]

BLAST of Spg029810 vs. ExPASy Swiss-Prot
Match: Q9M8L9 (Amino acid transporter AVT6E OS=Arabidopsis thaliana OX=3702 GN=AVT6E PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-22
Identity = 62/129 (48.06%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 37  GYNEFNGASFSGAVFNLSTTIIGAGIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLL 96
           G +   G+   GAVFNL+T+IIGAGIMALPA +K LGL LG  +II MA L+E S+ELL+
Sbjct: 68  GKSSNQGSGIYGAVFNLTTSIIGAGIMALPATMKVLGLVLGFVLIILMALLSEISVELLV 127

Query: 97  RFSRPRKSASYGGLMGDAFGRYGKMGLQICVLINN----------IGDVLSGTTDGGVHH 156
           RFS   KS SYG ++  A G+  ++  +IC+++NN          +GDV+SG+    +HH
Sbjct: 128 RFSVLYKSKSYGEVVQFALGKTARVLSEICIIVNNGGVLVVYLIIMGDVMSGS----LHH 187

[Close]

BLAST of Spg029810 vs. ExPASy Swiss-Prot
Match: Q0WQJ3 (Amino acid transporter AVT6D OS=Arabidopsis thaliana OX=3702 GN=AVT6D PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-21
Identity = 56/144 (38.89%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 24  KSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGAGIMALPAMVKELGLCLGVAMIIF 83
           K+PLLP++  E S  +  N  SF+GAVFN+ST+I+GAGIMA+PA  K LG+   +++I+ 
Sbjct: 6   KAPLLPNQ--EPSSSSSENHGSFAGAVFNISTSIVGAGIMAIPAAFKVLGVIPSLSIIVI 65

Query: 84  MAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGKMGLQICVLINN----------IG 143
           +A+L+  S   L++ S   +S +Y G+M ++FG+ G + + +  ++            IG
Sbjct: 66  IAWLSNVSAGFLMKSSLAGESTTYAGVMKESFGKSGAVAVTVVTMVVTFGSMIIFSIIIG 125

Query: 144 DVLSGTTDGGVHHAGVLEGWFGQH 158
           DV+SG    G+ H G+L+ WFG H
Sbjct: 126 DVISGNEKDGIIHLGLLQEWFGSH 147

[Close]

BLAST of Spg029810 vs. ExPASy Swiss-Prot
Match: Q9LYM2 (Amino acid transporter AVT6C OS=Arabidopsis thaliana OX=3702 GN=AVT6C PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.0e-20
Identity = 59/144 (40.97%), Postives = 92/144 (63.89%), Query Frame = 0


Query: 24  KSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGAGIMALPAMVKELGLCLGVAMIIF 83
           K+ LLP ++  +S   E +G+S SG VFN+ST+IIGAGIM++PA  K LG+     +I  
Sbjct: 6   KTHLLPKQEPSSS---ENHGSSTSGIVFNVSTSIIGAGIMSMPAAFKVLGIVPAFLIITI 65

Query: 84  MAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGKMGLQI--------CVLINN--IG 143
           +A+L+  S+  L++ +   +S +Y G+M ++FG+ G + +QI        C++I +  IG
Sbjct: 66  IAWLSTISVGFLMKSTLAGESTTYAGVMKESFGKTGSIAVQIATMVATFGCMIIFSIIIG 125

Query: 144 DVLSGTTDGGVHHAGVLEGWFGQH 158
           DVLSG  +GG  H GVL+ WFG +
Sbjct: 126 DVLSGNENGGPEHIGVLQEWFGSY 146

[Close]

BLAST of Spg029810 vs. ExPASy TrEMBL
Match: A0A6J1DP15 (amino acid transporter AVT6A-like OS=Momordica charantia OX=3673 GN=LOC111022182 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 139/167 (83.23%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTID LAPREE++S RKK AVDEKSPLLP+RQDE SG++EFNGASFSGAVFNLSTTIIGA
Sbjct: 1   MTIDTLAPREERRSIRKKAAVDEKSPLLPNRQDEGSGFHEFNGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGLCLGVAMIIFMAFLT+ASIELLLRFSRPRKS SYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTDASIELLLRFSRPRKSTSYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           M LQICVL+NN          IGDVLSGT+ GG HHAG+LEGWFGQ+
Sbjct: 121 MALQICVLVNNIGVLTVYMIIIGDVLSGTSTGGAHHAGILEGWFGQY 167

[Close]

BLAST of Spg029810 vs. ExPASy TrEMBL
Match: A0A0A0LMR5 (Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G075300 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.8e-67
Identity = 141/167 (84.43%), Postives = 147/167 (88.02%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTI++LAPREEK+S RKK AVDEKSPLLPSRQDE SG NEF+GASFSGAVFNLSTTIIGA
Sbjct: 1   MTIEDLAPREEKRSDRKKSAVDEKSPLLPSRQDEGSGVNEFSGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGL LGVAMII MAFLTEASIELLLRFSRPRKS SYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLLLGVAMIIIMAFLTEASIELLLRFSRPRKSTSYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           + LQI VL+NN          IGDVLSGTT GGVHHAGVLEGWFGQH
Sbjct: 121 IMLQISVLVNNIGVLTVYMIIIGDVLSGTTSGGVHHAGVLEGWFGQH 167

[Close]

BLAST of Spg029810 vs. ExPASy TrEMBL
Match: A0A1S3B3W1 (probable sodium-coupled neutral amino acid transporter 6 OS=Cucumis melo OX=3656 GN=LOC103485880 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 138/166 (83.13%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTI+N  PREEK+S RKK AVDEKSPLLPSRQD+ SG NEF+GASFSGAVFNLSTTIIGA
Sbjct: 1   MTIENFTPREEKRSDRKKSAVDEKSPLLPSRQDDGSGVNEFSGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGL LGVAMII MAFLTEASIELLLRFSRPRKS SYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLLLGVAMIIIMAFLTEASIELLLRFSRPRKSTSYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQ 157
           + LQICVL+NN          IGDVLSGTT  GVHHAGVLEGWFGQ
Sbjct: 121 IMLQICVLVNNIGVLTVYMIIIGDVLSGTTASGVHHAGVLEGWFGQ 166

[Close]

BLAST of Spg029810 vs. ExPASy TrEMBL
Match: A0A5A7U229 (Putative sodium-coupled neutral amino acid transporter 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00730 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 138/166 (83.13%), Postives = 144/166 (86.75%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTI+N  PREEK+S RKK AVDEKSPLLPSRQD+ SG NEF+GASFSGAVFNLSTTIIGA
Sbjct: 1   MTIENFTPREEKRSDRKKSAVDEKSPLLPSRQDDGSGVNEFSGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGL LGVAMII MAFLTEASIELLLRFSRPRKS SYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLLLGVAMIIIMAFLTEASIELLLRFSRPRKSTSYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQ 157
           + LQICVL+NN          IGDVLSGTT  GVHHAGVLEGWFGQ
Sbjct: 121 IMLQICVLVNNIGVLTVYMIIIGDVLSGTTASGVHHAGVLEGWFGQ 166

[Close]

BLAST of Spg029810 vs. ExPASy TrEMBL
Match: A0A6J1GUX3 (amino acid transporter AVT6A-like OS=Cucurbita moschata OX=3662 GN=LOC111457659 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.2e-65
Identity = 136/167 (81.44%), Postives = 145/167 (86.83%), Query Frame = 0


Query: 1   MTIDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGA 60
           MTIDNLAPREEK+S RKK  VDEKSPLLP RQDE +G NEF+GASFSGAVFNLSTTIIGA
Sbjct: 1   MTIDNLAPREEKRSGRKKSVVDEKSPLLPCRQDEGAGINEFSGASFSGAVFNLSTTIIGA 60

Query: 61  GIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGK 120
           GIMALPAMVKELGL +G+ MIIFMAFLTE SIELLLRFSRPRKSASYGGLMGDAFGRYGK
Sbjct: 61  GIMALPAMVKELGLFVGITMIIFMAFLTETSIELLLRFSRPRKSASYGGLMGDAFGRYGK 120

Query: 121 MGLQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           + LQICVL+NN          IGDVLSGTT  GVHHAGVLEGW+G+H
Sbjct: 121 IILQICVLVNNIGVLTVYMIIIGDVLSGTTADGVHHAGVLEGWWGRH 167

[Close]

BLAST of Spg029810 vs. TAIR 10
Match: AT3G30390.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 170.6 bits (431), Expect = 9.8e-43
Identity = 94/165 (56.97%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 3   IDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGAGI 62
           + ++AP   + SS    + D  +PLLP    +   ++EFNGASFSGAVFNL+TTIIGAGI
Sbjct: 4   VGDVAPIPRRNSS--TCSNDIAAPLLPECHGDEVAHDEFNGASFSGAVFNLATTIIGAGI 63

Query: 63  MALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGKMG 122
           MALPA +K LGL LG+ MI+ MAFLT+ASIE LLRFS+  K+ SYGGLMG +FG  G++ 
Sbjct: 64  MALPATMKILGLGLGITMIVVMAFLTDASIEFLLRFSKAGKNRSYGGLMGGSFGNPGRIL 123

Query: 123 LQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           LQ+ VL+NN          IGDVL+G T+ G+HH GVLEGWFG H
Sbjct: 124 LQVAVLVNNIGVLIVYMIIIGDVLAGKTEDGIHHFGVLEGWFGHH 166

[Close]

BLAST of Spg029810 vs. TAIR 10
Match: AT3G30390.2 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 170.6 bits (431), Expect = 9.8e-43
Identity = 94/165 (56.97%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 3   IDNLAPREEKKSSRKKVAVDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGAGI 62
           + ++AP   + SS    + D  +PLLP    +   ++EFNGASFSGAVFNL+TTIIGAGI
Sbjct: 4   VGDVAPIPRRNSS--TCSNDIAAPLLPECHGDEVAHDEFNGASFSGAVFNLATTIIGAGI 63

Query: 63  MALPAMVKELGLCLGVAMIIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGKMG 122
           MALPA +K LGL LG+ MI+ MAFLT+ASIE LLRFS+  K+ SYGGLMG +FG  G++ 
Sbjct: 64  MALPATMKILGLGLGITMIVVMAFLTDASIEFLLRFSKAGKNRSYGGLMGGSFGNPGRIL 123

Query: 123 LQICVLINN----------IGDVLSGTTDGGVHHAGVLEGWFGQH 158
           LQ+ VL+NN          IGDVL+G T+ G+HH GVLEGWFG H
Sbjct: 124 LQVAVLVNNIGVLIVYMIIIGDVLAGKTEDGIHHFGVLEGWFGHH 166

[Close]

BLAST of Spg029810 vs. TAIR 10
Match: AT5G38820.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 158.7 bits (400), Expect = 3.9e-39
Identity = 83/145 (57.24%), Postives = 106/145 (73.10%), Query Frame = 0


Query: 21  VDEKSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGAGIMALPAMVKELGLCLGVAM 80
           V+  +PLL     E++G  EFNGASFSGAVFNL+TTIIGAGIMALPA +K LGL  G+ +
Sbjct: 12  VESTAPLLQESSSESNGGGEFNGASFSGAVFNLATTIIGAGIMALPATMKILGLIPGITI 71

Query: 81  IIFMAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGKMGLQICVLINN--------- 140
           I+ MAFLT+ASIE LLRFS      SYGG+M D+FG+ G++ LQ+ +L++N         
Sbjct: 72  IVLMAFLTDASIEFLLRFSNIGNQRSYGGVMDDSFGKCGRIMLQVSILVSNIGVLIVYMI 131

Query: 141 -IGDVLSGTTDGGVHHAGVLEGWFG 156
            IGDVL+G  + G+HHAG+LEGWFG
Sbjct: 132 IIGDVLAGKNEYGIHHAGMLEGWFG 156

[Close]

BLAST of Spg029810 vs. TAIR 10
Match: AT1G80510.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-23
Identity = 62/129 (48.06%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 37  GYNEFNGASFSGAVFNLSTTIIGAGIMALPAMVKELGLCLGVAMIIFMAFLTEASIELLL 96
           G +   G+   GAVFNL+T+IIGAGIMALPA +K LGL LG  +II MA L+E S+ELL+
Sbjct: 68  GKSSNQGSGIYGAVFNLTTSIIGAGIMALPATMKVLGLVLGFVLIILMALLSEISVELLV 127

Query: 97  RFSRPRKSASYGGLMGDAFGRYGKMGLQICVLINN----------IGDVLSGTTDGGVHH 156
           RFS   KS SYG ++  A G+  ++  +IC+++NN          +GDV+SG+    +HH
Sbjct: 128 RFSVLYKSKSYGEVVQFALGKTARVLSEICIIVNNGGVLVVYLIIMGDVMSGS----LHH 187

[Close]

BLAST of Spg029810 vs. TAIR 10
Match: AT2G40420.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-22
Identity = 56/144 (38.89%), Postives = 90/144 (62.50%), Query Frame = 0


Query: 24  KSPLLPSRQDEASGYNEFNGASFSGAVFNLSTTIIGAGIMALPAMVKELGLCLGVAMIIF 83
           K+PLLP++  E S  +  N  SF+GAVFN+ST+I+GAGIMA+PA  K LG+   +++I+ 
Sbjct: 6   KAPLLPNQ--EPSSSSSENHGSFAGAVFNISTSIVGAGIMAIPAAFKVLGVIPSLSIIVI 65

Query: 84  MAFLTEASIELLLRFSRPRKSASYGGLMGDAFGRYGKMGLQICVLINN----------IG 143
           +A+L+  S   L++ S   +S +Y G+M ++FG+ G + + +  ++            IG
Sbjct: 66  IAWLSNVSAGFLMKSSLAGESTTYAGVMKESFGKSGAVAVTVVTMVVTFGSMIIFSIIIG 125

Query: 144 DVLSGTTDGGVHHAGVLEGWFGQH 158
           DV+SG    G+ H G+L+ WFG H
Sbjct: 126 DVISGNEKDGIIHLGLLQEWFGSH 147

The following BLAST results are available for this feature:

BLAST of Spg029810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893937.1	1.4e-70	87.43	amino acid transporter AVT6A-like [Benincasa hispida]	[more]
XP_022155039.1	2.2e-68	83.23	amino acid transporter AVT6A-like [Momordica charantia] >XP_022155040.1 amino ac...	[more]
XP_011649003.1	1.2e-66	84.43	amino acid transporter AVT6A [Cucumis sativus] >XP_031736897.1 amino acid transp...	[more]
XP_008441834.1	2.9e-65	83.13	PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Cucumis mel...	[more]
KAG6581709.1	6.6e-65	81.44	Amino acid transporter AVT6A, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]

BLAST of Spg029810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LI61	1.4e-41	56.97	Amino acid transporter AVT6A OS=Arabidopsis thaliana OX=3702 GN=AVT6A PE=2 SV=1	[more]
F4KBM7	5.4e-38	57.24	Amino acid transporter AVT6B OS=Arabidopsis thaliana OX=3702 GN=AVT6B PE=3 SV=1	[more]
Q9M8L9	1.4e-22	48.06	Amino acid transporter AVT6E OS=Arabidopsis thaliana OX=3702 GN=AVT6E PE=2 SV=1	[more]
Q0WQJ3	3.5e-21	38.89	Amino acid transporter AVT6D OS=Arabidopsis thaliana OX=3702 GN=AVT6D PE=2 SV=1	[more]
Q9LYM2	3.0e-20	40.97	Amino acid transporter AVT6C OS=Arabidopsis thaliana OX=3702 GN=AVT6C PE=2 SV=1	[more]

BLAST of Spg029810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DP15	1.1e-68	83.23	amino acid transporter AVT6A-like OS=Momordica charantia OX=3673 GN=LOC111022182...	[more]
A0A0A0LMR5	5.8e-67	84.43	Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G075300 PE...	[more]
A0A1S3B3W1	1.4e-65	83.13	probable sodium-coupled neutral amino acid transporter 6 OS=Cucumis melo OX=3656...	[more]
A0A5A7U229	1.4e-65	83.13	Putative sodium-coupled neutral amino acid transporter 6 OS=Cucumis melo var. ma...	[more]
A0A6J1GUX3	3.2e-65	81.44	amino acid transporter AVT6A-like OS=Cucurbita moschata OX=3662 GN=LOC111457659 ...	[more]

BLAST of Spg029810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G30390.1	9.8e-43	56.97	Transmembrane amino acid transporter family protein	[more]
AT3G30390.2	9.8e-43	56.97	Transmembrane amino acid transporter family protein	[more]
AT5G38820.1	3.9e-39	57.24	Transmembrane amino acid transporter family protein	[more]
AT1G80510.1	1.0e-23	48.06	Transmembrane amino acid transporter family protein	[more]
AT2G40420.1	2.5e-22	38.89	Transmembrane amino acid transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 44..137 e-value: 3.2E-16 score: 59.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR22950	AMINO ACID TRANSPORTER	coord: 9..157
None	No IPR available	PANTHER	PTHR22950:SF511	SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 5-LIKE	coord: 9..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg029810.1	Spg029810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015171	amino acid transmembrane transporter activity
molecular_function	GO:0015293	symporter activity