Spg029743 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGACTGGGCTATGGATGCTGAAGAATGGGGAAGCAATATTGCAATGGAGAATGACGTTCCGCCGCATTTATTAGCCGATGAAGACGAAGTCGAAGAAGAAGAAAATATAACAAGACGGTGGTGATGGTGTGCACTGCTTTCCGGCGATGATGTGCCTTTTCCCGAAAAATCATGGAGAAGAGAGCTTGGAAGTTGGAATGGCCTGAACCCAGAGATCCAAGTCTAACGACAAGTGATGGATATTGATAGTTTGCTGTCGGAGATGATTTTTGTTCTTGTTTTTTTTTTTTTTGGACATCAATGTTTTAGGTTGTAATTGAACCAAGTTTGTTAATTATTTGTTTATTTTTTTGGTTGAAGATTTATTGACGTTTTGTCAAATCTTTAATGTAAAGTGGTTGATATGTTGTATAGTAATTATTCGGTTGAATTACAAGTTTAGGCTGTGTTTGATAATTCATTTAGTTTTTGGGTTTTGAAAATTAAGTTTATAAACATTACTTTCGTCTATAAGTTTATTTATTTTGTTATCTACCTTCCTCCCATTTCCATATTTTCAAAAATGAAGTCAAATTTTGAAAAACTAGAATATATATATATATATATATATATATAGTTTTTAAAATTTTGTTTTTGTTTTTGGAAACTGGCTAAGAATTCAAATGTGTCCTTAACAAAGATGAAAATTTCATTGTAAGGAAATTGGGAGAAACCAAATATAATTTTCAAAGACCAAAAACTAAAAACCAAATAATTATCAAACGGTACCTAAAATATAAAGTTTGTGTTTAAAAGGATCCTGAAGTTCAAAAATTTCCAAAAAGACTCATAACTTTCAATTTTGTGTCTAATAAGTCCCTTAAACTATAAATGTGTGTCTCATTGGTGGTTGAACTTTCAATTTTGTCTAATAAGTGTTCTTATTGTATTCAACAATTTAAAAAAAAATAAATAATAAATCTATTAGACATGTTGAATTTCCAATGATCATAAATTTTTAATTTCATGTCTAATAGGTTCGTGATTTTTTTTTAAAAAAAATGTCAAATAAGTTGAGGATCTATTAGATATAAAATTAAAATTTTAAGGACAACCTATTAGATTGGACACTTTTTTAAGTTTAGAGACTTATTATTAAATACAAAAGTTAAAAGCTCTAGAGGACCCTTGTTGGACACTTTAGAATCTATCGATTTATTAGACATAAACTTGAAAAATTCAGGGACTAGAATGGTAATTTAACCTAATTATTATTATTCCCTTTAATTGACATATATAATTTAAAAATAAATTAAATGTATTATTTAATTATTTTGTATATATATTTTGAGTTCGACCTTTTGTATTTCTAATTGAAAATATATTTTAATAATGAATCGAATCGAACTTAATTAGCTAAACTCCTTTTCCTAATTAAATTAGTTAATTAGAAAATATATTACAACAATTAATAAATTTAGAAGAGAAGGTTTTCCCATTAGGAGAAGGAAAAGCTCCAAAAGGCCTATAAATATAGAACCTTTAGATCACTCTAAATGATAAATCATCAATTAAAGAGCTCTTCTCTCAAAAGTCAAGAGAAGAATTAATAAAACTTTCTCAAATTTTCTTCTGTGATAATAATAATGTTTTCTTTGGAAGCTTTGGCAATGGCGGAGGTTGATTTTAATGAGTGGGCTCTGGACGCTGAAGAATGGGAAACAAACCAAATGGACAACAATGTGCCACCGCATTTAGTAGCCGATGAAGAAGAAGACAAGTTTCCGGCCGCCGGATTCTTCCGCAGATGGCGGCGGAAGATGGCGGAGCTGGTGGTGTTCGTTGCAATTCCGGTATTATGTGTCACTTCACTTTAG ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGACTGGGCTATGGATGCTGAAGAATGGGGAAGCAATATTGCAATGGAGAATGACGTTCCGCCGCATTTATTAGCCGATGAAGACGAAGTTGATTTTAATGAGTGGGCTCTGGACGCTGAAGAATGGGAAACAAACCAAATGGACAACAATGTGCCACCGCATTTAGTAGCCGATGAAGAAGAAGACAAGTTTCCGGCCGCCGGATTCTTCCGCAGATGGCGGCGGAAGATGGCGGAGCTGGTGGTGTTCGTTGCAATTCCGGTATTATGTGTCACTTCACTTTAG ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGACTGGGCTATGGATGCTGAAGAATGGGGAAGCAATATTGCAATGGAGAATGACGTTCCGCCGCATTTATTAGCCGATGAAGACGAAGTTGATTTTAATGAGTGGGCTCTGGACGCTGAAGAATGGGAAACAAACCAAATGGACAACAATGTGCCACCGCATTTAGTAGCCGATGAAGAAGAAGACAAGTTTCCGGCCGCCGGATTCTTCCGCAGATGGCGGCGGAAGATGGCGGAGCTGGTGGTGTTCGTTGCAATTCCGGTATTATGTGTCACTTCACTTTAG MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFNEWALDAEEWETNQMDNNVPPHLVADEEEDKFPAAGFFRRWRRKMAELVVFVAIPVLCVTSL Homology
BLAST of Spg029743 vs. NCBI nr
Match: KAG6577295.1 (hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 78.2 bits (191), Expect = 5.0e-11 Identity = 49/92 (53.26%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Spg029743 vs. NCBI nr
Match: KAG7015383.1 (hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 75.9 bits (185), Expect = 2.5e-10 Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 0
BLAST of Spg029743 vs. NCBI nr
Match: XP_022943015.1 (uncharacterized protein LOC111447880 [Cucurbita moschata]) HSP 1 Score: 75.1 bits (183), Expect = 4.2e-10 Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of Spg029743 vs. NCBI nr
Match: KAE8649147.1 (hypothetical protein Csa_014525, partial [Cucumis sativus]) HSP 1 Score: 72.4 bits (176), Expect = 2.7e-09 Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 0
BLAST of Spg029743 vs. NCBI nr
Match: KAG7015382.1 (hypothetical protein SDJN02_23017, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 70.1 bits (170), Expect = 1.4e-08 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of Spg029743 vs. ExPASy TrEMBL
Match: A0A6J1FX98 (uncharacterized protein LOC111447880 OS=Cucurbita moschata OX=3662 GN=LOC111447880 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.0e-10 Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0
BLAST of Spg029743 vs. ExPASy TrEMBL
Match: A0A0A0KU90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026820 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09 Identity = 38/48 (79.17%), Postives = 41/48 (85.42%), Query Frame = 0
BLAST of Spg029743 vs. ExPASy TrEMBL
Match: A0A0A0KWE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026810 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.3e-08 Identity = 46/91 (50.55%), Postives = 52/91 (57.14%), Query Frame = 0
BLAST of Spg029743 vs. ExPASy TrEMBL
Match: A0A5D3CZU0 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00110 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.7e-07 Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of Spg029743 vs. ExPASy TrEMBL
Match: A0A5A7TS68 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004640 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.7e-07 Identity = 35/52 (67.31%), Postives = 41/52 (78.85%), Query Frame = 0
BLAST of Spg029743 vs. TAIR 10
Match: AT2G22320.1 (unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04 Identity = 28/62 (45.16%), Postives = 35/62 (56.45%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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